View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18522_low_2 (Length: 628)
Name: NF18522_low_2
Description: NF18522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18522_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 592; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 592; E-Value: 0
Query Start/End: Original strand, 1 - 612
Target Start/End: Complemental strand, 46355555 - 46354945
Alignment:
| Q |
1 |
gaggacaactgtttctggtgtctgcatggaatcgtcatcagcagaagataggaagtcattcattccaaataattcccaatcaacctgctgcaagattcca |
100 |
Q |
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| T |
46355555 |
gaggacaactgtttctggtgtctgcatggaatcgtcatcagcagaagataggaagtcattcattccaaataattcccaatcaacctgctgcaagattcca |
46355456 |
T |
|
| Q |
101 |
gacactcgttcggagctgtgtggagagcgatcttgtaaccgtgtttcttgttccattgctaaagtgtcgacttgggccttcagttcatacaaccgatcac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46355455 |
gacactcgttcggagctgtgtggagagcgatcttgtaaccgcgtttcttgttccattgctaaagtgtcgacttgggccttcagttcatacaaccgatcac |
46355356 |
T |
|
| Q |
201 |
caattcttgccgctactgcatcatacagtctttttcttggcacgtccgggcctttctccatgtttagtatatcgtcaaaatttataggatcgcccacgat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46355355 |
caattcttgccgctactgcatcatacagtctttttcttggcacgtccgggcctttctccatgtttagtatatcgtcaaaatttataggatcgcccacgat |
46355256 |
T |
|
| Q |
301 |
tacagtaacctaaacaatacaaacatgtaaaaacaataagatttaaactgaaaatacaatcaaaattaatcacataaataatatataagccacgcccagc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46355255 |
tacagtaacctaaacaatacaaacatgtaaaaacaataagatttaaactgaaaatacaatcaaaattaatcacataaataatatataagccacgcccagc |
46355156 |
T |
|
| Q |
401 |
agaatctgaattcaatcaggactcaggtgaacattttgttcttcgaggaggtgaaaaatagacccataaccaagtgacagagagtggcattccactaaaa |
500 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46355155 |
agaatctgaattcaatcaggactcaggtgaacactttgttcttcgaggaggtgaaaaatagacccataaccaagtgacagagagtggcattccactaaaa |
46355056 |
T |
|
| Q |
501 |
gctagcaaatatagcaccatcccgtattttgaaccttggaaagctcatggattgactaagggttgattatttcactgactccctatgcgtcgatgaaata |
600 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46355055 |
gctagc-aatatagcaccatcccgtattttgaaccttggaaagctcatggattgactaagggttgattatttcactgactccctatgcgttgatgaaata |
46354957 |
T |
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| Q |
601 |
atttcggaaatg |
612 |
Q |
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|||||||||||| |
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| T |
46354956 |
atttcggaaatg |
46354945 |
T |
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