View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18526_high_10 (Length: 354)
Name: NF18526_high_10
Description: NF18526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18526_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 9 - 337
Target Start/End: Original strand, 31010303 - 31010631
Alignment:
| Q |
9 |
gagatgaattgggttggaaatgtttggtttttgatggagcaattatggtgtttgggattgttattgcagtgttgggaacttggtcttgcctaattgatat |
108 |
Q |
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| T |
31010303 |
gagatgaattgggttggaaatgtttggtttttgatggagcaattatggtgtttgggattgttattgcagtgttgggaacttggtcttgcctaatggatat |
31010402 |
T |
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| Q |
109 |
tttttaccgtcaggcttgattaaacaataaaatctcttgatcatggttttaaactgtttgcggctgcaatataaaggatagtgaggtctctacaatgaca |
208 |
Q |
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| T |
31010403 |
tttttaccctcaggcttgattaaacaataaaatctcttaatcatggttttaaattgtttgcggccgcaatataaaggatattgaggtctctacaatgaca |
31010502 |
T |
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| Q |
209 |
tcagaactgcaatgtttaccgaaaccgtaatttaaaaccatggtctggttataaggttgagggttttttgatggagctattagttgaggtannnnnnngg |
308 |
Q |
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| T |
31010503 |
tcacaactgcaatgtttatcgaaaccgtaatttaaaaccatggtctggttataaggttgaggattttttgatggagctattagttgaggtatttatttgg |
31010602 |
T |
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| Q |
309 |
gttgattgttatgttaccataataacttg |
337 |
Q |
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| T |
31010603 |
gttgattgttatgttaccataataacttg |
31010631 |
T |
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