View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18526_low_18 (Length: 251)
Name: NF18526_low_18
Description: NF18526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18526_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 37600483 - 37600258
Alignment:
| Q |
13 |
aatatatttaaccttaataataataaccagtaaaataaggacacataattagacaagtgcacgttgtcgaggattttgttcacgtattcataaaccaaat |
112 |
Q |
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|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37600483 |
aatatatttaactttgataataataaccagtaaaataaggacacataattagacaagtgcacgttgtcgaggattttgttcacgtattcataaaccaaat |
37600384 |
T |
|
| Q |
113 |
aaataatcaataggtcatcatccatttgaagtcactatatatattgaagtggaaactaatttcagctttacacatgactaagtcaggaatacagctaccn |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37600383 |
aaataatcaataggtcatcatccatttgaagtcactatatatattgaagtggaaactaatttcagctttccacatgactaagtcaggaatacagctacca |
37600284 |
T |
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| Q |
213 |
nnnnnntatatatcattgggaaatag |
238 |
Q |
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|||||||||||||||||||| |
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| T |
37600283 |
aaaaaatatatatcattgggaaatag |
37600258 |
T |
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