View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18527_high_26 (Length: 268)
Name: NF18527_high_26
Description: NF18527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18527_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 30495440 - 30495666
Alignment:
| Q |
25 |
aacagaacaatttttattgaatcagtnnnnnnnngaaagaacaatatttgttgaaaaagataagaagaaatggaagtcttgggtaagggaacagaaatag |
124 |
Q |
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| T |
30495440 |
aacagaacaatttttattgaatcagtaaaaaaaagaaagaacaatatttgttgaaaaagataagaagaaatggaagtcttgggtaagggaacagaaatag |
30495539 |
T |
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| Q |
125 |
ttacctatgtctgtacggatatccttatggggtagggttttggagaacatgctttaaactatatgcttataaataatactggactactggttgtgattga |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30495540 |
ttacctatgtctgtacggatatccttatggggtagggttttggagaacatgctttaaactatatgcttataaataatactggactactggttgtgattga |
30495639 |
T |
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| Q |
225 |
gatcacattcagatatgaaaagacata |
251 |
Q |
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||||||||||||||||||||||||||| |
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| T |
30495640 |
gatcacattcagatatgaaaagacata |
30495666 |
T |
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