View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18527_low_38 (Length: 237)
Name: NF18527_low_38
Description: NF18527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18527_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 37783839 - 37783619
Alignment:
| Q |
1 |
tttggcaaaatcatttttgtcagaggatttcaaaatattctttacattcaaagtaaattatcacttcatctcaaaaaagaattttgcatacaacaaactc |
100 |
Q |
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| T |
37783839 |
tttggcaaaatcatttttgtcataggatttcaaaatattctttaaattcaaagtaaattatcacttcatctcaaaaaagaattttgcatacaacaaactc |
37783740 |
T |
|
| Q |
101 |
tccgtgtcttatgtttatttctcgcactttcatatatgtgtatatacgtatctatactaatatattagtgtaaaatgataaggatataatttctctttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37783739 |
tccgtgtcttatgtttatttctcgcactttcatatatgtgtatatacgtatctatactaatatattagtgtaaaatgataaggatataatttctctttca |
37783640 |
T |
|
| Q |
201 |
tttgttaggattgggtataac |
221 |
Q |
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|||||||||| |||||||||| |
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| T |
37783639 |
tttgttaggactgggtataac |
37783619 |
T |
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