View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18527_low_42 (Length: 223)
Name: NF18527_low_42
Description: NF18527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18527_low_42 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 19582890 - 19583080
Alignment:
| Q |
17 |
atatcatccacttgtggtggagctttattttatttaaaatcatagattagtccattgaaattaacaccagataaatataatctaagatcttgtgaggagt |
116 |
Q |
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| T |
19582890 |
atatcattcatttgtggtggagctttattttatttaaaattatagattagtccattgaaattaacaccagatgaatataatctaagatcttgtgaggagt |
19582989 |
T |
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| Q |
117 |
acattctaggatcccaagtcaacaacataagataaacttaagtgaagttttgtctttcatgatagtgttcgtagaatttataaattattat |
207 |
Q |
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|||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
19582990 |
acattctaagatcccaagtcaacaacataagacaaactcaaatgaagttttgtctttcatgatagtgtttgtagaatttataaattattat |
19583080 |
T |
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