View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18529_high_3 (Length: 256)

Name: NF18529_high_3
Description: NF18529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18529_high_3
NF18529_high_3
[»] chr7 (32 HSPs)
chr7 (1-220)||(38595394-38595612)
chr7 (1-221)||(8081483-8081704)
chr7 (6-218)||(8082661-8082873)
chr7 (1-220)||(8832385-8832603)
chr7 (1-204)||(40304591-40304793)
chr7 (1-216)||(38592955-38593170)
chr7 (1-219)||(40303777-40303994)
chr7 (1-216)||(37107358-37107574)
chr7 (1-220)||(12621973-12622191)
chr7 (1-240)||(25270275-25270508)
chr7 (1-211)||(42974683-42974893)
chr7 (1-198)||(8833603-8833801)
chr7 (1-213)||(18798621-18798835)
chr7 (1-220)||(1065377-1065586)
chr7 (120-217)||(43830653-43830750)
chr7 (120-221)||(43831946-43832047)
chr7 (96-219)||(38875032-38875155)
chr7 (143-219)||(38198761-38198837)
chr7 (120-220)||(46044791-46044891)
chr7 (95-221)||(43309590-43309714)
chr7 (131-220)||(46043365-46043454)
chr7 (143-219)||(45957805-45957881)
chr7 (133-216)||(33624487-33624570)
chr7 (120-223)||(33625903-33626006)
chr7 (124-219)||(43308455-43308550)
chr7 (131-178)||(46330536-46330583)
chr7 (154-229)||(38873871-38873946)
chr7 (131-230)||(45959168-45959267)
chr7 (133-219)||(15131839-15131925)
chr7 (120-181)||(44168279-44168339)
chr7 (143-219)||(43084358-43084434)
chr7 (120-177)||(3495399-3495456)
[»] chr1 (37 HSPs)
chr1 (1-223)||(27551895-27552117)
chr1 (1-220)||(12251763-12251982)
chr1 (1-218)||(51339997-51340214)
chr1 (1-216)||(25352846-25353060)
chr1 (1-223)||(51839890-51840112)
chr1 (1-222)||(49768804-49769024)
chr1 (1-220)||(27550470-27550689)
chr1 (1-223)||(51841403-51841627)
chr1 (2-220)||(12896622-12896839)
chr1 (1-218)||(51338140-51338357)
chr1 (1-221)||(11396707-11396927)
chr1 (1-219)||(52010753-52010970)
chr1 (1-219)||(48218250-48218467)
chr1 (1-220)||(25351646-25351851)
chr1 (1-216)||(49767368-49767581)
chr1 (1-178)||(52882697-52882875)
chr1 (93-220)||(12898857-12898987)
chr1 (1-97)||(12897490-12897586)
chr1 (9-97)||(52881400-52881488)
chr1 (149-221)||(11397778-11397850)
chr1 (120-219)||(15053345-15053444)
chr1 (120-219)||(33709443-33709542)
chr1 (122-218)||(12368710-12368806)
chr1 (144-224)||(36249380-36249460)
chr1 (143-219)||(37987214-37987290)
chr1 (131-218)||(534121-534208)
chr1 (131-178)||(30982866-30982913)
chr1 (120-219)||(36248032-36248131)
chr1 (120-203)||(46595868-46595951)
chr1 (124-222)||(21795894-21795992)
chr1 (133-218)||(36368404-36368489)
chr1 (131-178)||(37985948-37985995)
chr1 (120-218)||(15054690-15054788)
chr1 (143-224)||(29232165-29232246)
chr1 (143-220)||(30981448-30981525)
chr1 (131-219)||(33708018-33708106)
chr1 (131-220)||(36362176-36362265)
[»] chr5 (28 HSPs)
chr5 (1-222)||(37811958-37812178)
chr5 (1-220)||(3407289-3407507)
chr5 (1-218)||(19333358-19333575)
chr5 (1-219)||(2263191-2263409)
chr5 (1-217)||(43211028-43211244)
chr5 (1-219)||(40272134-40272352)
chr5 (11-221)||(42258295-42258508)
chr5 (3-220)||(37813125-37813342)
chr5 (1-177)||(43209693-43209869)
chr5 (1-225)||(19332143-19332357)
chr5 (1-156)||(42645291-42645446)
chr5 (5-158)||(41617342-41617496)
chr5 (99-219)||(9168465-9168583)
chr5 (105-225)||(23318018-23318138)
chr5 (120-225)||(26866175-26866280)
chr5 (120-221)||(41140118-41140219)
chr5 (120-216)||(18951141-18951237)
chr5 (120-219)||(13921150-13921249)
chr5 (148-222)||(19193061-19193135)
chr5 (120-216)||(26864933-26865029)
chr5 (134-224)||(41138720-41138810)
chr5 (131-220)||(20898444-20898533)
chr5 (133-218)||(43439949-43440034)
chr5 (134-217)||(23312658-23312741)
chr5 (143-218)||(43441381-43441455)
chr5 (143-221)||(8217213-8217291)
chr5 (136-218)||(38693952-38694034)
chr5 (131-218)||(8218508-8218596)
[»] chr2 (27 HSPs)
chr2 (1-225)||(9112075-9112299)
chr2 (1-224)||(30982790-30983013)
chr2 (1-221)||(3117645-3117870)
chr2 (4-219)||(3118909-3119124)
chr2 (1-206)||(30982311-30982516)
chr2 (1-226)||(32317882-32318111)
chr2 (1-218)||(32319344-32319562)
chr2 (1-219)||(9111246-9111464)
chr2 (1-214)||(32319921-32320132)
chr2 (133-223)||(42488178-42488268)
chr2 (137-223)||(3104686-3104772)
chr2 (143-225)||(20721741-20721823)
chr2 (120-218)||(33001359-33001457)
chr2 (120-224)||(23787314-23787418)
chr2 (133-219)||(43933244-43933330)
chr2 (156-217)||(21621969-21622030)
chr2 (143-227)||(1373255-1373339)
chr2 (131-218)||(43931840-43931927)
chr2 (120-219)||(44493997-44494096)
chr2 (154-220)||(3105939-3106005)
chr2 (120-217)||(20721045-20721142)
chr2 (134-220)||(44492579-44492665)
chr2 (131-220)||(21438994-21439083)
chr2 (131-203)||(20719545-20719617)
chr2 (99-162)||(34477204-34477266)
chr2 (120-162)||(20701007-20701049)
chr2 (142-178)||(1373720-1373756)
[»] chr4 (30 HSPs)
chr4 (1-224)||(28162906-28163129)
chr4 (1-221)||(13508543-13508762)
chr4 (1-223)||(48738181-48738403)
chr4 (1-220)||(34512226-34512448)
chr4 (1-224)||(44451757-44451981)
chr4 (1-217)||(28164122-28164338)
chr4 (56-220)||(34513487-34513651)
chr4 (120-219)||(35061312-35061411)
chr4 (120-220)||(33688373-33688473)
chr4 (134-219)||(10322829-10322914)
chr4 (131-221)||(31318063-31318153)
chr4 (120-222)||(44208571-44208673)
chr4 (134-219)||(40171410-40171495)
chr4 (143-223)||(31470657-31470737)
chr4 (1-53)||(34513417-34513469)
chr4 (143-222)||(45046734-45046813)
chr4 (131-225)||(35054877-35054971)
chr4 (136-222)||(53572039-53572125)
chr4 (143-220)||(13086449-13086526)
chr4 (134-214)||(31316242-31316322)
chr4 (147-220)||(11669818-11669891)
chr4 (131-220)||(44209992-44210081)
chr4 (143-220)||(45045199-45045276)
chr4 (131-219)||(15562628-15562715)
chr4 (131-219)||(40170070-40170158)
chr4 (138-216)||(25244118-25244196)
chr4 (131-217)||(25421766-25421851)
chr4 (133-219)||(53568852-53568938)
chr4 (143-224)||(25423204-25423285)
chr4 (189-221)||(15157654-15157686)
[»] chr8 (38 HSPs)
chr8 (1-223)||(3865361-3865584)
chr8 (1-220)||(44893531-44893750)
chr8 (1-220)||(44894810-44895028)
chr8 (1-225)||(32243348-32243572)
chr8 (1-220)||(30133927-30134148)
chr8 (56-225)||(3866818-3866988)
chr8 (1-173)||(6243202-6243377)
chr8 (1-219)||(32244797-32245015)
chr8 (4-155)||(6244452-6244604)
chr8 (120-223)||(39308271-39308374)
chr8 (120-225)||(13324048-13324153)
chr8 (131-220)||(42816014-42816103)
chr8 (131-220)||(37705832-37705921)
chr8 (120-220)||(37707220-37707320)
chr8 (120-223)||(13322879-13322982)
chr8 (131-220)||(24451176-24451265)
chr8 (131-220)||(35368885-35368974)
chr8 (120-220)||(21135018-21135118)
chr8 (120-220)||(39338016-39338116)
chr8 (120-223)||(1692581-1692684)
chr8 (143-225)||(21136461-21136543)
chr8 (134-220)||(42817218-42817304)
chr8 (143-220)||(36062499-36062576)
chr8 (131-220)||(45021960-45022049)
chr8 (134-224)||(16472684-16472774)
chr8 (134-224)||(16477255-16477345)
chr8 (86-220)||(39310582-39310716)
chr8 (143-220)||(35864180-35864257)
chr8 (170-225)||(6247930-6247985)
chr8 (133-220)||(21575506-21575593)
chr8 (143-221)||(39336711-39336789)
chr8 (143-224)||(14835013-14835094)
chr8 (120-217)||(24452597-24452694)
chr8 (143-221)||(22959789-22959867)
chr8 (143-220)||(35370209-35370285)
chr8 (120-161)||(35862794-35862835)
chr8 (148-220)||(14840484-14840556)
chr8 (131-167)||(36063932-36063968)
[»] chr6 (16 HSPs)
chr6 (1-224)||(289759-289981)
chr6 (1-219)||(3912937-3913154)
chr6 (4-219)||(21108468-21108683)
chr6 (1-219)||(5086821-5087039)
chr6 (1-218)||(288677-288894)
chr6 (1-112)||(3914820-3914931)
chr6 (101-219)||(3914956-3915074)
chr6 (124-224)||(15119342-15119442)
chr6 (105-220)||(7855371-7855486)
chr6 (131-220)||(22971591-22971680)
chr6 (131-220)||(23816718-23816807)
chr6 (143-225)||(7852241-7852323)
chr6 (131-219)||(17246589-17246677)
chr6 (131-167)||(8230951-8230987)
chr6 (143-223)||(22972306-22972386)
chr6 (143-223)||(23816012-23816092)
[»] chr3 (34 HSPs)
chr3 (1-219)||(31992048-31992265)
chr3 (1-219)||(52700838-52701056)
chr3 (1-216)||(52702060-52702277)
chr3 (1-219)||(8574980-8575199)
chr3 (1-218)||(41926949-41927166)
chr3 (1-202)||(44557002-44557203)
chr3 (1-219)||(25233261-25233480)
chr3 (1-225)||(33476556-33476780)
chr3 (1-221)||(44555592-44555812)
chr3 (1-220)||(41928238-41928455)
chr3 (1-216)||(8576303-8576521)
chr3 (1-216)||(31990752-31990962)
chr3 (1-212)||(25353357-25353552)
chr3 (1-219)||(33475148-33475365)
chr3 (26-217)||(19831016-19831208)
chr3 (120-215)||(116626-116721)
chr3 (120-219)||(45234415-45234513)
chr3 (121-221)||(27867773-27867873)
chr3 (131-222)||(37180073-37180164)
chr3 (133-221)||(53244710-53244798)
chr3 (131-222)||(41786583-41786674)
chr3 (146-216)||(53246660-53246730)
chr3 (143-220)||(117953-118030)
chr3 (131-220)||(32942686-32942775)
chr3 (143-219)||(44558087-44558163)
chr3 (120-223)||(3670702-3670805)
chr3 (143-222)||(32944127-32944206)
chr3 (133-220)||(50614243-50614330)
chr3 (131-217)||(32148107-32148193)
chr3 (134-219)||(32146698-32146783)
chr3 (131-178)||(19669436-19669483)
chr3 (133-218)||(54185835-54185920)
chr3 (131-203)||(37178653-37178725)
chr3 (143-215)||(54185304-54185376)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-221)||(282609-282829)
scaffold0005 (1-220)||(283637-283855)
[»] scaffold0026 (2 HSPs)
scaffold0026 (131-225)||(100853-100947)
scaffold0026 (148-220)||(100959-101031)
[»] scaffold0003 (1 HSPs)
scaffold0003 (120-219)||(239206-239305)
[»] scaffold0651 (2 HSPs)
scaffold0651 (131-221)||(5517-5607)
scaffold0651 (134-214)||(7375-7455)
[»] scaffold0097 (2 HSPs)
scaffold0097 (143-225)||(25570-25652)
scaffold0097 (131-203)||(23383-23455)
[»] scaffold0093 (1 HSPs)
scaffold0093 (143-225)||(49276-49358)
[»] scaffold0148 (2 HSPs)
scaffold0148 (120-181)||(38877-38938)
scaffold0148 (144-220)||(34671-34747)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 38595394 - 38595612
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  38595394 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcatgtcttggtcagcattccgttagcctagtcagcacagtttgac 38595493  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||||| |||||||||||||| ||| ||||||||||| |||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||    
T  38595494 ggcaaggaccgaacttacaaacgga-aaaaacgttggggatgaaaaatttaatataattttaatagggatcaatgttggaagctcacttatttgtaggga 38595592  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  38595593 ccttaaacataattaaccct 38595612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8081704 - 8081483
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||    
T  8081704 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgggtcagcattccgttagcctagtcagcacagtttgac 8081605  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||||||||||||||||||| | ||| || |||||||| |||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||    
T  8081604 ggcaaggaccaaacttacaaacggaaaaaaaactttggggatgaaaaatttaataaaattttaatagggaccaatgtttgaagctcgcttatttgtaggg 8081505  T
Q  200 accttaaacataattaacccta 221  Q
    ||||||||||||||||||||||    
T  8081504 accttaaacataattaacccta 8081483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 8082661 - 8082873
Alignment:
Q  6 atgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggcaa 105  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||  ||||||| |||||||||||  |||||||| ||||||||||||||||||||    
T  8082661 atgatgtcatttaccacatggcagccatgtcacttaaaatgtccatgtggcatgtctgggtcagcattcctttagcctaatcagcacagtttgacggcaa 8082760  T
Q  106 ggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacctta 205  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  8082761 ggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttaatagggaccaatgttgaaagctcgcttatttgtagggatctta 8082860  T
Q  206 aacataattaacc 218  Q
    |||||||||||||    
T  8082861 aacataattaacc 8082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 8832603 - 8832385
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||    
T  8832603 aacatatgatgccattta-cacatggcagccatgtcacttgaaatgtccatgtggcatgtctgggtcagcattccgttagcctagtcagcacagtttgac 8832505  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||| ||||||||||||| ||  |||||| ||||||||||||||    
T  8832504 ggcaaggaccaaacttacaaacggaaaaaaacgttcgggatgaaaaatttaataaaattttaatagggaccaattttagaagctctcttatttgtaggga 8832405  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  8832404 ccttaaacataattaaccct 8832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 40304591 - 40304793
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||    
T  40304591 aacatatgatgtcatttaccgcatggcagccatgtcacttgaaatgtccatgtgacatttctgggtcagcattctgttagcctagtcaacacagtttgac 40304690  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  40304691 ggcaaggaccaaacttacaaacggataaaaacgtt-gggatgaaaaatttaataaaatttaaatagggaccaatgttggaaggccacttatttgtaggga 40304789  T
Q  201 cctt 204  Q
    ||||    
T  40304790 cctt 40304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 38593170 - 38592955
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| | |||||||||||||    
T  38593170 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcttgtcttggtcagcattctgttagcctaattagcacagtttgac 38593071  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||||||| ||| |||||| |||| |||| ||||||||||||| |  ||||| |||| || ||||||||||||||||||||||    
T  38593070 ggtaaggaccaaacttacaaacggaaaaaaacgttgaggatgaaaattttaataaaattttagcagggatcaatattaaaagctcacttatttgtaggga 38592971  T
Q  201 ccttaaacataattaa 216  Q
    ||||||||||||||||    
T  38592970 ccttaaacataattaa 38592955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40303994 - 40303777
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||  ||||||| ||||||||||||||||||  |||| || |||||||||||||||||||||||| ||||||||||||    
T  40303994 aacatatgatgtcatttaccacatggtagccatgccacttgaaatgtccatgtggcatgcctgggtcagcattctgttagcctagtctgcacagtttgac 40303895  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||||| |    
T  40303894 ggcaaggaccaaacttaaaaatgga-aaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagcttgcttatttgtaggaa 40303796  T
Q  201 ccttaaacataattaaccc 219  Q
    |||||||||||||||||||    
T  40303795 ccttaaacataattaaccc 40303777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 37107574 - 37107358
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||||| ||  |||||||  |||||||||||||||||||||||| |||||||||||    
T  37107574 aacatatgatgtcatttaccacataacagtcatgtcacttgaaatgtccacgtggcatgtctgagtcagcattctgttagcctagtcaacacagtttgac 37107475  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||||||||||||||||||| | ||| |||||||| || ||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||    
T  37107474 ggcaaggaccaaacttacaaacggaaaaaaaacgttgggaatgaaaaatttaataaaatttaaatagggaccaatgttaaaaactcgcttatttataggg 37107375  T
Q  200 accttaaacataattaa 216  Q
    |||||||||||||||||    
T  37107374 accttaaacataattaa 37107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12621973 - 12622191
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||| ||||| |||||||||||||| ||  |||||||  ||||||||| ||||||||||||||||||||||||||    
T  12621973 aacatatgatgtcatttaccacatggcaggcatgtgacttgaaatgtccacgtggcatgtctgagtcagcattttgttagcctagtcagcacagtttgac 12622072  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| || ||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  12622073 ggcaaggaccaaacttacaaacggaaaaaaacattgaggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttataggga 12622172  T
Q  201 ccttaaacataattaaccct 220  Q
     |||||| ||||||||||||    
T  12622173 -cttaaagataattaaccct 12622191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25270508 - 25270275
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||   ||||||||| |||||||| ||||| ||||||||||||||||||||    
T  25270508 aacatatgatgtcatttaccacatgacaaccatgtcacttgaaatgtccatgcggcatgtcttgatcagcattatgttaacctagtcagcacagtttgac 25270409  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggat-aaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||  || ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||       ||||  |    
T  25270408 ggcaataactaaacttacaaacggataaaaacgttggggatgaaaaaatttaataaaatttaaataaggatcaatgttggaagctc-------tgtaaag 25270316  T
Q  200 accttaaacataattaaccctaaaatgatttctaatatttt 240  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25270315 accttaaacataattaaccctaaaatgatttctaatatttt 25270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 42974683 - 42974893
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  42974683 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgggtcagcattccgttagcctagtcagcactgtttgac 42974782  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||  |||||||||||||||||| ||| | ||||||||| |||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||    
T  42974783 ggcaaaaaccaaacttacaaacggaaaaaaaggttggggatgaaaaatttaataaaattttaatagggaccaatgttagaagctcgcttatttgtaggga 42974882  T
Q  201 ccttaaacata 211  Q
     ||||||||||    
T  42974883 tcttaaacata 42974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 8833603 - 8833801
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||| ||||||||||||     
T  8833603 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgcctgggtcagcattccgttagcctagttagcacagtttgat 8833702  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    |||||||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||    
T  8833703 ggcaaggaccaaacttacaaacggaaaaaaaacgttggggatgaaaaatttaataaaattttaatagggatcaatgttggaagctcacatatttgtagg 8833801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 18798835 - 18798621
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||| |||||  ||||| | |||| |||||||||||||||| ||| |||||||| ||    
T  18798835 aacatatgatgtcatttaccacatgacggtcatgtcacttgaaatgttcatgtggcatgtatgggtccgcattctgttagcctaatcaacacagtttaac 18798736  T
Q  101 ggcaaggaccaaacttacaaacg--gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    ||||||||||||||||||||| |   | ||| | ||||||||| |||||||||||||||||||||||| ||||||||||| |||||  |||||||| |||    
T  18798735 ggcaaggaccaaacttacaaatgaaaaaaaaaatgttggggatgaaaaatttaataaaatttaaatagagaccaatgttggaagcttgcttatttgcagg 18798636  T
Q  199 gaccttaaacataat 213  Q
    |||||||||||||||    
T  18798635 gaccttaaacataat 18798621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1065586 - 1065377
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  1065586 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 1065487  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    ||||| |||||||||||||||||| | ||| ||||| | ||| |          ||||||||||||| |||||||||||||||||||||||||| || ||    
T  1065486 ggcaaagaccaaacttacaaacggaaaaaaaacgttagagatga----------aaaatttaaatagagaccaatgttgaaagctcacttatttata-gg 1065398  T
Q  200 accttaaacataattaaccct 220  Q
    |||||||||||||||||||||    
T  1065397 accttaaacataattaaccct 1065377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 43830750 - 43830653
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||| | ||| ||||| ||||| |||||||||||||||||    
T  43830750 aacggataaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcacctatttataggggccttaaacataattaac 43830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 43831946 - 43832047
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||| | | | ||||| ||| |||||||||||||||||||||    
T  43831946 aacggacaaaaacgttggggacaaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagaccttaaacataattaaccc 43832045  T
Q  220 ta 221  Q
    ||    
T  43832046 ta 43832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 38875032 - 38875155
Alignment:
Q  96 ttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgt 195  Q
    ||||||| | |||||||| | || |||||  ||| ||||||||||  |||||||||||||||||||| ||| ||| ||||||| |||| | ||||||| |    
T  38875032 ttgacggtagggaccaaattcactaacggtcaaaaacgttggggaccaaaaatttaataaaatttaagtagagactaatgttggaagcacgcttatttat 38875131  T
Q  196 agggaccttaaacataattaaccc 219  Q
    ||||||||||||||||||||||||    
T  38875132 agggaccttaaacataattaaccc 38875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 38198837 - 38198761
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||||||||||||||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  38198837 aaaaatttaataaaatttaaatagggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccc 38198761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 46044791 - 46044891
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| || || ||||| |||||||||||||||||||| ||||||| |||||||||| | | ||||||| || | |||| |||||||||||||||    
T  46044791 aacggaaaaaaacattagggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcttatttataagaacctaaaacataattaaccc 46044890  T
Q  220 t 220  Q
    |    
T  46044891 t 46044891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 43309590 - 43309714
Alignment:
Q  95 tttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttg 194  Q
    |||||||| ||||||||| |||   |||||| |||| ||||||| || |||||||||||||||||||| ||| ||  |||||||||| | | | |||||     
T  43309590 tttgacggtaaggaccaatcttgataacggaaaaag-cgttggg-atcaaaaatttaataaaatttaagtagagattaatgttgaaaacacgcctattta 43309687  T
Q  195 tagggaccttaaacataattaacccta 221  Q
    |||||||||||||||| ||||||||||    
T  43309688 tagggaccttaaacatgattaacccta 43309714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 46043454 - 46043365
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| |||| |||| ||||||||||||||||    
T  46043454 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcatatttataggaacctaaaacataattaaccct 46043365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 45957881 - 45957805
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||||||||||| ||||| | |||||||||| | | | ||||| ||||||||| |||||||||||||||    
T  45957881 aaaaatttaataaaatttaagtaggggctaatgttgaaaacacgcctatttatagggacctaaaacataattaaccc 45957805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 33624570 - 33624487
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaa 216  Q
    ||||||||| |||||||||||||||||||| |||| || |||||| ||| | | | ||||| ||||||||| ||||||||||||    
T  33624570 gttggggatcaaaaatttaataaaatttaagtaggaactaatgttaaaaacgcgcctatttatagggacctaaaacataattaa 33624487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 33625903 - 33626006
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| |||| || |||| || || | |   ||||| ||||||||| |||||||||||||||    
T  33625903 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgatggaaacacgtctatttatagggacctaaaacataattaaccc 33626002  T
Q  220 taaa 223  Q
    ||||    
T  33626003 taaa 33626006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 43308550 - 43308455
Alignment:
Q  124 gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||||||||||  |||||||||||||||||||| | |||||  ||||||||| | |   ||||| || ||||||||||||||||||||||    
T  43308550 gataaaaacgttggggaccaaaaatttaataaaatttaagttgggactgatgttgaaaacacgtctatttataaggaccttaaacataattaaccc 43308455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 46330583 - 46330536
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  46330583 acgttggggataaaaaatttaataaaatttaagtagggactaatgttg 46330536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 38873946 - 38873871
Alignment:
Q  154 aaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaatgatt 229  Q
    ||||||||| ||||||| ||||||||||   | | ||||| ||||||||||||||||||||||||| |||| ||||    
T  38873946 aaaatttaagtagggactaatgttgaaaatgcgcctatttatagggaccttaaacataattaacccaaaaaagatt 38873871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 45959168 - 45959267
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaatgattt 230  Q
    ||||||| ||| |||| ||||||||||||||| ||| ||| ||||||| || |  || ||||| ||| ||||| ||||||||||||||| ||||| ||||    
T  45959168 acgttggagatcaaaattttaataaaatttaagtagagactaatgttggaaacgaacctatttatagagacctaaaacataattaacccaaaaataattt 45959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 15131839 - 15131925
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||||| | | |  |||| || |||||| |||||||||||||||    
T  15131839 gttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgccgatttataaggacctaaaacataattaaccc 15131925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 44168279 - 44168339
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaa 181  Q
    |||||| ||| |||||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  44168279 aacggaaaaaaacgttggg-atcaaaaatttaataaaatttaagtagggactaatgttgaaa 44168339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 43084358 - 43084434
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||||||||||| |||| || ||||||| || | | | ||||| ||| ||||| |||||||||||||||    
T  43084358 aaaaatttaataaaatttaagtaggaactaatgttggaaacacgcctatttatagagacctaaaacataattaaccc 43084434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 3495456 - 3495399
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgtt 177  Q
    |||||| ||| |||| |||||  |||||||||||||||||||| ||||||| ||||||    
T  3495456 aacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgtt 3495399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27551895 - 27552117
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||  ||| |||||||||||||||||||| |||||||||||    
T  27551895 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacgtgacatgtctgagtctgcattctgttagcctagtcaacacagtttgac 27551994  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  27551995 ggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttataggga 27552094  T
Q  201 ccttaaacataattaaccctaaa 223  Q
    |||||||||||||||||||||||    
T  27552095 ccttaaacataattaaccctaaa 27552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 12251763 - 12251982
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||  |||||||  |||| |||||||||||||||||||||||| ||||||    
T  12251763 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacgtggcatgtctgagtcaacattctgttagcctagtcagcacaatttgac 12251862  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  12251863 ggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttataggga 12251962  T
Q  201 ccttaaacataattaaccct 220  Q
    | ||||||||||||||||||    
T  12251963 ctttaaacataattaaccct 12251982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 51339997 - 51340214
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||| |||  ||||||||||||||||||||||||||||||||||||    
T  51339997 aacatatgatgtcatttaccacatgacagccatgtcatttgaaatgtccatgtggcatatctgagtcagcattctgttagcctagtcagcacagtttgac 51340096  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||||||| |||||||||| | ||| || |||||||| ||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||| |||    
T  51340097 ggcaaggaccaagcttacaaacgaaaaaaaacattggggatgaaaaatttaataaaatttaaatagggaccaatgctgaaaactcgcttatatgtaagga 51340196  T
Q  201 ccttaaacataattaacc 218  Q
    ||||||||||||||||||    
T  51340197 ccttaaacataattaacc 51340214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 25352846 - 25353060
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||| ||||||||||| |||||||||||||||||||||| |     
T  25352846 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgttcatgtgacatatctgggtcagcattccgttagcctagtcagcacagttt-at 25352944  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||||    
T  25352945 ggcaaggaccaaacttacaaacggaaaaagacattggagatgaaaaatttaataaaattttaatagggaccaatattggaagctcgcttatttgtaggga 25353044  T
Q  201 ccttaaacataattaa 216  Q
    | ||||||||||||||    
T  25353045 ctttaaacataattaa 25353060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 51840112 - 51839890
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||   ||||||  ||||||||| |||||||||||||| |||||||||||    
T  51840112 aacatatgatatcatttaccacatgagagccatgtcacttgaaatgtccatgtggtatgtctgagtcagcattttgttagcctagtcaacacagtttgac 51840013  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||| |||||||||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  51840012 ggcaaggatcaaacttacaaacggaaaaaaacattggggatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttataggga 51839913  T
Q  201 ccttaaacataattaaccctaaa 223  Q
    | |||||||||||||| ||||||    
T  51839912 ctttaaacataattaatcctaaa 51839890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 49768804 - 49769024
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||  ||||||||| ||||| ||||||||||||| ||||||    
T  49768804 aacatatgatgtcatttaccacatgacagtcatgtcacttgaaatgtccacgtgacatgtctgagtcagcattttgttaacctagtcagcacaatttgac 49768903  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||  | |||    
T  49768904 ggcaaggaccaaacttacaaacggaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggaccaatgttagaagctcacttatttaca-gga 49769002  T
Q  201 ccttaaacataattaaccctaa 222  Q
    | ||||||||||||||||||||    
T  49769003 ctttaaacataattaaccctaa 49769024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 27550689 - 27550470
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |  |||||||  |||| ||||||||||||||||| |||||| ||||||    
T  27550689 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccacatggcatgtctgagtcaacattctgttagcctagtgagcacaatttgac 27550590  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| |    
T  27550589 ggcaaggaccaaacttacaaatggaaaaaaaggttagggataaaaaatttaataaaatttaaatagggatcaatgttggaagctcacttatttataggta 27550490  T
Q  201 ccttaaacataattaaccct 220  Q
    | ||||||||||||||||||    
T  27550489 ctttaaacataattaaccct 27550470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 51841403 - 51841627
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  51841403 aacatatgatgtcatttaccacataacagtcatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 51841502  T
Q  101 ggcaaggaccaaacttacaaacgg--ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    ||||||||||||||||||||||||  | ||| |  |||||||| ||||| || ||||||||||||||| ||| |||||||||||||  |||||||||| |    
T  51841503 ggcaaggaccaaacttacaaacggaaaaaaaaatattggggatgaaaaaatttataaaatttaaatagtgacaaatgttgaaagcttgcttatttgtaag 51841602  T
Q  199 gaccttaaacataattaaccctaaa 223  Q
    |||||||||||||||||||||||||    
T  51841603 gaccttaaacataattaaccctaaa 51841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 12896839 - 12896622
Alignment:
Q  2 acatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacg 101  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||| ||||  | ||| | |||||||||| |||||||||||||||||||||||||||    
T  12896839 acatatgatgtcatttaccacatgacactcatgtcacttgaaatgtctatgtggcttgtttgggtcagcattatgttagcctagtcagcacagtttgacg 12896740  T
Q  102 gcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggac 201  Q
    ||||||| ||||||||||||| |||||| | ||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||    
T  12896739 gcaaggatcaaacttacaaacagataaaaatgtt-gggatgaaaaatttaataaaatttaaataaggaccaatgttaaaagcttgcttatttgtagggac 12896641  T
Q  202 cttaaacataattaaccct 220  Q
    |||||||||||||||||||    
T  12896640 cttaaacataattaaccct 12896622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 51338357 - 51338140
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  51338357 aacatataatgtcatttaccacatgacagtcatgtcacttgaaatgtcaatgtgacatgtctgagtcagcattctgttagcctagtcagcacagtttgac 51338258  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||| |||||||| || | ||| || |||| ||| ||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||||    
T  51338257 ggcaaggaccagacttacaatcgaaaaaaaacattggagatgaaaaatttaataaaatttaaataggaaccaatgttggaaactcgcttatttgtaggga 51338158  T
Q  201 ccttaaacataattaacc 218  Q
     |||||| ||||||||||    
T  51338157 tcttaaatataattaacc 51338140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11396927 - 11396707
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  11396927 aacatatgatgtcatttaccgcatggcagccatgtcacttgaaatgtccatgtagcatgtcttggtcagcattctgttagcctaggcagcacaatttgac 11396828  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||| | | ||| ||||||||||| ||||||||| |||||||| | ||| ||||||| ||  |||||| ||| ||||||||||    
T  11396827 ggtaaggaccaaacttacaaatgaaaaaaaacgttggggatgaaaaatttattaaaattttagtagagaccaatattagaagctcgcttgtttgtaggga 11396728  T
Q  201 ccttaaacataattaacccta 221  Q
    | |||||||||||||||||||    
T  11396727 ctttaaacataattaacccta 11396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 52010753 - 52010970
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| || |||||||||||||||||||||||   ||||||| ||||| ||||||||||||||| |||||||||||||||    
T  52010753 aacatatgatgtcatttaccacatggcaaccatgtcacttgaaatgtccatgcggcatgtctgggtcaacattctgttagcctaatcagcacagtttgac 52010852  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||| ||| ||| | ||||||| | |||||||||||||||||| |||||||| |||||||  |||||| ||||||||||||||    
T  52010853 ggcaaggaccaaacttacaaaaggaaaaaaatgttgggg-tgaaaaatttaataaaattttaatagggagcaatgttagaagctcgcttatttgtaggga 52010951  T
Q  201 ccttaaacataattaaccc 219  Q
    |||||||||||| ||||||    
T  52010952 ccttaaacataaataaccc 52010970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 48218250 - 48218467
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||| |||| ||||||||  |||||||||||||||| |||||||||||||||||||    
T  48218250 aacatatgatgtcatttaccacatgagagtcatgtcacttgaaatgtcaatgtgacatgtctaagtcagcattctgttagtctagtcagcacagtttgac 48218349  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| |||| ||||||| ||| |  ||| | ||| | ||||||||||||||||||||||||||| ||||||||| || |||||| |||||||| | |||    
T  48218350 ggcaatgacctaacttaccaacagcaaaaaatgttcgagataaaaaatttaataaaatttaaataaggaccaatgctggaagctcgcttatttgca-gga 48218448  T
Q  201 ccttaaacataattaaccc 219  Q
    | |||||| ||||||||||    
T  48218449 ctttaaacttaattaaccc 48218467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 25351851 - 25351646
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||  |||| |||||| ||||||||||||||||             
T  25351851 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcatgtcagggtccgcattccgttagcctagtcagca--------- 25351761  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
        ||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||    
T  25351760 ----aggaccaaacttacaaacggaaaaaaacattgggaataaaaaatttaataaaattttaatagggaccaatgttggaagctcgtttatttgtaggga 25351665  T
Q  201 ccttaaacataattaaccct 220  Q
     |||||||||||||||||||    
T  25351664 -cttaaacataattaaccct 25351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 49767581 - 49767368
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||  |||| ||||||||||||||| |||||||||||||||    
T  49767581 aacatatgatgtcatttaccacatgacagccatatcacttgaaatgtccacgtgacatgtctgagtcaacattctgttagcctaatcagcacagtttgac 49767482  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| | ||||||||||||||||| ||| | ||| ||||| ||||||||||||||||||||||||| || ||| || |||  ||  |||||| |||  |    
T  49767481 ggcaaaggccaaacttacaaacgga-aaaaatgtt-gggatgaaaaatttaataaaatttaaataggaacgaatattaaaaattcgtttatttatagcaa 49767384  T
Q  201 ccttaaacataattaa 216  Q
    ||||||||||||||||    
T  49767383 ccttaaacataattaa 49767368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 52882697 - 52882875
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||  ||||| ||||||||| ||||||| || |||||||||    
T  52882697 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtcaatgtgacatgtctaagtcagtattctgttaacctagtcggcgcagtttgac 52882796  T
Q  101 gg---caaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    ||    ||||| |||||||||| || |||||| ||||| ||||| |||||||||||||||| |||||| ||||||||||||    
T  52882797 ggtaaaaaggatcaaacttacacac-gataaaaacgtt-gggatgaaaaatttaataaaatctaaatatggaccaatgttg 52882875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 12898857 - 12898987
Alignment:
Q  93 agtttgacggcaaggaccaaacttacaaacggata---aagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcactt 189  Q
    ||||||||||||| ||||||||||||||||| | |   || | ||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||    
T  12898857 agtttgacggcaatgaccaaacttacaaacgaaaacaaaaaaagttggggatgaaaaatttaataaaatttaaataggaaccaatgttggaagctcgctt 12898956  T
Q  190 atttgtagggaccttaaacataattaaccct 220  Q
    |||| ||||||||||||||||||||||||||    
T  12898957 atttatagggaccttaaacataattaaccct 12898987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12897490 - 12897586
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagttt 97  Q
    |||||||||||| ||||| |||||| || |||||||||||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||||||||    
T  12897490 aacatatgatgtgatttaccacatggcaaccatgtcacttgaaatgtccatgtgacatgtctgggtgaacattctgttagtctagtcagcacagttt 12897586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 52881488 - 52881400
Alignment:
Q  9 atgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagttt 97  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||| ||| ||||||||    
T  52881488 atgtcatttaccacatgacagccatgtcacttgaaatgtctatgtggcatgtctaggtcagcattctgttagcctaatcaacacagttt 52881400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 11397778 - 11397850
Alignment:
Q  149 ttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    |||||| ||||| ||||||| ||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  11397778 ttaatataattttaataggggccaatgttggaagctcgcatatttgtagggaccttaaacataattaacccta 11397850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 15053444 - 15053345
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||| |||||  ||| |||||||||||||||| ||||||| |||||||||| | | | ||||| ||||||||| |||||||||||||||    
T  15053444 aacggaaaaaaacgtcggggaccaaatatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 15053345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 33709443 - 33709542
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||| |||||||||||||||||||| ||||||| ||| ||  || | | | ||||| ||||||||| |||||||||||||||    
T  33709443 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatattagaaacacgcctatttatagggacctaaaacataattaaccc 33709542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 12368710 - 12368806
Alignment:
Q  122 cggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    |||| ||| ||||| ||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| ||||||||||||||    
T  12368710 cggaaaaaaacgttagggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaacc 12368806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 36249380 - 36249460
Alignment:
Q  144 aaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    ||||||||||||||||||| ||||||| |||||||||| | | | ||||| |||| || | ||||||||||||||||||||    
T  36249380 aaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttataggaacttaaaacataattaaccctaaaa 36249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 37987214 - 37987290
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  37987214 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 37987290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 534121 - 534208
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||| ||||| ||||||||||||||||||||||||| || |||||||||| | | | ||||| | | ||||| ||||||||||||||    
T  534121 acgttcgggatcaaaaatttaataaaatttaaataggaactaatgttgaaaacacgcctatttattgagacctaaaacataattaacc 534208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 30982866 - 30982913
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  30982866 acgttggggataaaaaatttaataaaatttaagtagggactaatgttg 30982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 36248131 - 36248032
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||| |||||  |||||||||||||||||||| ||||||| ||||||| || | |   ||||| ||||||||| |||||||||||||||    
T  36248131 aacggaaaaaaacgtcggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaaccc 36248032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 46595951 - 46595868
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| ||||||| || ||||||| | | | ||||| |||||||||    
T  46595951 aacggaaaaaaacgttggggacaaaaaatttaataaaatttaagtagggactaacgttgaaaacgcgcctatttatagggacct 46595868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 222
Target Start/End: Original strand, 21795894 - 21795992
Alignment:
Q  124 gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    |||||| || |||||||  |||||||||||||||||||| |||||||  |||||| || | |   ||||| |||||||||||||||||||| |||||||    
T  21795894 gataaaaacattggggaccaaaaatttaataaaatttaagtagggactgatgttgtaaacacgtctatttatagggaccttaaacataatttaccctaa 21795992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 36368404 - 36368489
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||||||| |||||||||||||||||||| ||||||| || |||| || | | | ||||| || |||||| ||||||||||||||    
T  36368404 gttggggatcaaaaatttaataaaatttaagtagggactaaggttggaaacgcgcctatttataaggacctaaaacataattaacc 36368489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 37985995 - 37985948
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  37985995 acgttggagatcaaaaatttaataaaatttaaatagggactaatgttg 37985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 15054690 - 15054788
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    |||||| ||| || |||||||  |||||||||||||||||| | |||| || ||||||| || | ||| ||||| ||||||| | ||||||||||||||    
T  15054690 aacggaaaaaaacattggggaccaaaaatttaataaaattttagtaggtactaatgttggaaacacacctatttatagggacttaaaacataattaacc 15054788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 29232165 - 29232246
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    |||||||||||||||||||| ||||||  ||||||| ||   | | ||||| ||||||||| ||||||||||||||| ||||    
T  29232165 aaaaatttaataaaatttaagtagggattaatgttggaaatacgcctatttatagggacctaaaacataattaacccgaaaa 29232246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 30981525 - 30981448
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||| ||||||| ||||||| || | | | ||| | | ||||||| ||||||||||||||||    
T  30981525 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatatatcgggacctaaaacataattaaccct 30981448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 33708106 - 33708018
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||||  |||||||||||||||||||| || |||| ||||||| || |   | ||||| |||| |||| |||||||||||||||    
T  33708106 acgttggggaccaaaaatttaataaaatttaagtatggactaatgttggaaacgtgcctatttataggaacctaaaacataattaaccc 33708018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 36362265 - 36362176
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||||| ||||  ||||||| || |   | ||||| || | |||| ||||||||||||||||    
T  36362265 acgttggggactaaaaatttaataaaatttaaatggggattaatgttggaaacatgcctatttataagaacctaaaacataattaaccct 36362176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37812178 - 37811958
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||| |||    
T  37812178 aacatatgatgtcatttaccacattacagccatgtcacttgaaatgtccatgtggcatgtcttgctcagcattctgttagcctagtcagcacagtt-gac 37812080  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||||||||||||||    
T  37812079 ggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgtaggga 37811980  T
Q  201 ccttaaacataattaaccctaa 222  Q
    ||||||||||||||||||||||    
T  37811979 ccttaaacataattaaccctaa 37811958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 3407289 - 3407507
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||| |||||||||||    
T  3407289 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtcttggtcagcattcctttagcctagtcaacacagtttgac 3407388  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  3407389 ggtaaggaccaaacttacaaacggaaaaaaacgtt-gggatgaaaaatttaataaaattttagtagggaccaatgttgaaagctcgcttatttgtaggga 3407487  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  3407488 ccttaaacataattaaccct 3407507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 19333358 - 19333575
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  19333358 aacatatgatgtcatttaccgcatggcagccatgtcacttgaaatgtccatgtggcatgtcttagtcagcattctgttagcctagtcagcacagtttgac 19333457  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||| |||||||| ||||||||  ||||| ||||||||||||||    
T  19333458 ggcaaggaccgaacttacaaacggaaaaaaacgttggtgatgaaaaatttaatataattttaatagggatcaatgttggtagctcgcttatttgtaggga 19333557  T
Q  201 ccttaaacataattaacc 218  Q
    ||||||||||||||||||    
T  19333558 ccttaaacataattaacc 19333575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 2263191 - 2263409
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| | |||| ||||||||||||| |||||||||||||  |||||||  ||||||||| ||||||||||||||||||||||||||    
T  2263191 aacatatgatgtcatttacctcatggcagccatgtcactagaaatgtccatgtggcatgtctgagtcagcattatgttagcctagtcagcacagtttgac 2263290  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||||||||||||| |||||||||| |||| |||||| | |||||||||||||||||||||||||||||||||| ||| |  |||||||| |||||    
T  2263291 ggcaaggaccaaacttactaacggataaaaacgtcggggatgagaaatttaataaaatttaaatagggaccaatgttggaagtttgcttatttgaaggga 2263390  T
Q  201 ccttaaacataattaaccc 219  Q
    |||||||||||||||||||    
T  2263391 ccttaaacataattaaccc 2263409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43211028 - 43211244
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  43211028 aacatatgatatcatttaccacatggcagccatgtcacttgaaatatccatgtgacatgtctgggtcaacattctgttagcctagtcagcacagtttgac 43211127  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||| ||||||| ||  |||||  |||||||||||| |    
T  43211128 ggcaaagaccaaacttacaaacggaaaaaaacgttggggataaaatatttaataaaatttaagtagagaccaatattagaagcttgcttatttgtaggaa 43211227  T
Q  201 ccttaaacataattaac 217  Q
     ||||||||||||||||    
T  43211228 gcttaaacataattaac 43211244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40272352 - 40272134
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  ||||||||| ||||||||||||||||||| ||||||    
T  40272352 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgagtcagcattttgttagcctagtcagcacaatttgac 40272253  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||| |||||||  ||||| | ||| |||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||| || | |    
T  40272252 ggcaaggatcaaacttgtaaacgaaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcatttatttataagaa 40272153  T
Q  201 ccttaaacataattaaccc 219  Q
    | |||||||||||||||||    
T  40272152 ctttaaacataattaaccc 40272134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 42258295 - 42258508
Alignment:
Q  11 gtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggcaaggacc 110  Q
    |||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||| |||||      
T  42258295 gtcatttaccacatgacagccaagtcacttgaaatgtccatgtggcatgtcttggtcagcattccgttagcctagtcagtacagtttgacggtaaggatt 42258394  T
Q  111 aaacttacaaacgg---ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaa 207  Q
    ||||||||||||||   | ||| ||||||||||| |||||||||||||||||| | || || ||||||||| |||||| ||||||| |||| ||||||||    
T  42258395 aaacttacaaacggaaaaaaaaaacgttggggatgaaaaatttaataaaattttagtaaggtccaatgttggaagctcgcttatttataggaaccttaaa 42258494  T
Q  208 cataattaacccta 221  Q
    ||||||||||||||    
T  42258495 cataattaacccta 42258508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 37813125 - 37813342
Alignment:
Q  3 catatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacgg 102  Q
    ||||||||||| |||| |||||| || ||||||||||||||||||||||||  ||||||||||| ||||||  |||||||||||||||||||||||||||    
T  37813125 catatgatgtc-tttaccacatggcaaccatgtcacttgaaatgtccatgtgtcatgtcttggttagcatttcgttagcctagtcagcacagtttgacgg 37813223  T
Q  103 caaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggac 201  Q
    |||||||  ||||| ||||||| | ||| ||||| ||||| |||||||||||||||||| |||||| | |||||||| |||||| |||||||||| |||     
T  37813224 caaggactgaacttccaaacggaaaaaaaacgttagggatgaaaaatttaataaaattttaataggaaacaatgttggaagctcgcttatttgtaaggat 37813323  T
Q  202 cttaaacataattaaccct 220  Q
    |||||||||||||||||||    
T  37813324 cttaaacataattaaccct 37813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 43209869 - 43209693
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| | |||| |||||||||||||| |||||||||||    
T  43209869 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtgacatgtctgggttaacattatgttagcctagtcaacacagtttgac 43209770  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgtt 177  Q
    |||||||| ||||||||||||| || |||  |||| | ||| ||| |||||||||||||||| |||| |||||||||    
T  43209769 ggcaaggatcaaacttacaaacagaaaaaatcgttagagatgaaatatttaataaaatttaattaggaaccaatgtt 43209693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 19332357 - 19332143
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||    
T  19332357 aacatatgatgtcttttatcacatgacagccatgtcacttgaaatgtccatgtggcatgtcttggtcagcattccgttagcctagtcagcagagtttgac 19332258  T
Q  101 ggcaaggaccaaacttacaaacgg--ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    || ||| ||||||||||||||| |  | ||| ||||| ||||||           ||||||| | ||||||||||||||| ||| || ||||||||||||    
T  19332257 ggtaagaaccaaacttacaaacagaaaaaaaaacgtt-gggata-----------aaaattttagtagggaccaatgttggaagttcgcttatttgtagg 19332170  T
Q  199 gaccttaaacataattaaccctaaaat 225  Q
     ||||||||||||||||||||||||||    
T  19332169 aaccttaaacataattaaccctaaaat 19332143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 42645291 - 42645446
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||  ||||| | |||||||||| |||||||||||||| |||| ||||||    
T  42645291 aacatatgatgtcatttacgacatgacagtcatgtcacttgaaatgtccatgtggcatgtatgggtcagcattatgttagcctagtcatcacaatttgac 42645390  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaa 156  Q
    ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||    
T  42645391 ggcaaggaccaaacttacaaacggataaaaacattggggatgaaaaatttaataaa 42645446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 41617496 - 41617342
Alignment:
Q  5 tatgatgtcatttatcacatgacagccatgtcacttgaaa-tgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggc 103  Q
    |||||||||||||||||||||||||||||||||||||||| | || |  |   || |||  |||||||||||||||| ||| |||||| | |||||||||    
T  41617496 tatgatgtcatttatcacatgacagccatgtcacttgaaaatatcgacatggtatatctgagtcagcattctgttagtctaatcagcataatttgacggc 41617397  T
Q  104 aaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaat 158  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  41617396 aaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaat 41617342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 9168583 - 9168465
Alignment:
Q  99 acggcaaggaccaaacttacaaacggataaaga-cgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtag 197  Q
    ||||||| ||||||||||||||| ||| ||| | | |||||||| ||||||||||   ||||||||||||||||||||||| |||||| ||||||| |||    
T  9168583 acggcaaagaccaaacttacaaatggaaaaaaaacattggggatgaaaaatttaa---aatttaaatagggaccaatgttggaagctcgcttatttatag 9168487  T
Q  198 ggaccttaaacataattaaccc 219  Q
    |||| |||||||||||||||||    
T  9168486 ggactttaaacataattaaccc 9168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 23318018 - 23318138
Alignment:
Q  105 aggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacctt 204  Q
    ||||||||  || |||||||  ||| ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| |||||||||     
T  23318018 aggaccaagtttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggaccta 23318117  T
Q  205 aaacataattaaccctaaaat 225  Q
    |||||||||||||||| ||||    
T  23318118 aaacataattaacccttaaat 23318138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 26866175 - 26866280
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||| |||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  26866175 aacggaaaaaaacgtcggggagcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccc 26866274  T
Q  220 taaaat 225  Q
    | ||||    
T  26866275 ttaaat 26866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 41140118 - 41140219
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| || |||||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  41140118 aacggaaaaaaacattggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 41140217  T
Q  220 ta 221  Q
    ||    
T  41140218 ta 41140219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 18951141 - 18951237
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaa 216  Q
    |||||| ||| | ||||||||| |||||||||||||||||||| ||||||| ||||||| || | | ||||||| || |||||| ||||||||||||    
T  18951141 aacggaaaaaaatgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttataaggacctaaaacataattaa 18951237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 13921150 - 13921249
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| || |||||||  |||||||||||||||||||||||||||| ||||||| || | | | ||||| || |||||| |||||||||||||||    
T  13921150 aacggaaaaaaacattggggaccaaaaatttaataaaatttaaatagggactaatgttggaaacgcgcctatttataaggacctaaaacataattaaccc 13921249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 19193061 - 19193135
Alignment:
Q  148 tttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    ||||||| ||||| ||||||||  ||||||| |||||| ||||||||||||  ||||||||||||||||||||||    
T  19193061 tttaatataattttaatagggattaatgttggaagctcgcttatttgtaggatccttaaacataattaaccctaa 19193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 26865029 - 26864933
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaa 216  Q
    |||||| ||| ||||||||||  ||||||| |||||||||||| ||||||| ||||||  || | | ||||||| ||||||||| ||||||||||||    
T  26865029 aacggaaaaaaacgttggggaccaaaaattgaataaaatttaagtagggactaatgttagaaacgcgcttatttatagggacctaaaacataattaa 26864933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 41138810 - 41138720
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    |||||||  |||||||||||||||||||| ||||||| ||||||| |  | | | ||||| ||||||||| ||||||||||||||| ||||    
T  41138810 ttggggaccaaaaatttaataaaatttaagtagggactaatgttggagacgcgcctatttatagggacctaaaacataattaacccaaaaa 41138720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 20898533 - 20898444
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||| ||||||| | ||| | ||||||| || | ||| || || ||||||||||||||||||||||||||    
T  20898533 acgttggggaccaaaaatttaatacaatttaagttggggctaatgttggaaacacacctaattatagggaccttaaacataattaaccct 20898444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 43440034 - 43439949
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||||| | | | ||||| ||||||||| ||| ||||||||||    
T  43440034 gttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacgcctatttatagggacctaaaagataattaacc 43439949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 23312741 - 23312658
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    |||||||  |||||||||||||||||||| |||| |  ||||||| || | | | ||||| ||||||||| |||||||||||||    
T  23312741 ttggggaccaaaaatttaataaaatttaagtaggaattaatgttggaaacacgcctatttatagggacctaaaacataattaac 23312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 43441381 - 43441455
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    |||||||||||||||||||| ||| ||| |||||||||| | | | ||||| ||| |||| |||||||||||||||    
T  43441381 aaaaatttaataaaatttaagtagagactaatgttgaaaacacgcctatttttagagacc-taaacataattaacc 43441455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 8217291 - 8217213
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    |||||||||||||||||||  | ||| | ||||||| || | ||| ||||| |||| |||| |||||||||||||||||    
T  8217291 aaaaatttaataaaatttatgttggggctaatgttggaaacacacctatttataggaacctaaaacataattaacccta 8217213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 38693952 - 38694034
Alignment:
Q  136 ggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    |||||| |||||||||||||||||||| | ||||  ||| ||| || | | | ||||| ||||||||| ||||||||||||||    
T  38693952 ggggatcaaaaatttaataaaatttaagtggggattaatattggaaacacgcctatttatagggacctaaaacataattaacc 38694034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 218
Target Start/End: Original strand, 8218508 - 8218596
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggac-caatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||||||||  ||||| |||||||||||||| |||||||  ||||||| || | ||| ||||| ||| ||||| ||| ||||||||||    
T  8218508 acgttggggaccaaaaacttaataaaatttaagtagggactaaatgttggaaacacacctatttatagagacctaaaatataattaacc 8218596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 9112075 - 9112299
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||  |||||||  |||||||||||||||||||||||| |||||||||||    
T  9112075 aacatatgatgtcatttatcacatggcaaccatgtcacttgaaatgtccacgtggcatgtctgagtcagcattctgttagcctagtcaacacagtttgac 9112174  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||    
T  9112175 ggcaaggaccaaacttacaaaccgaaaaaaacgttggggatgaaaaatttaataaaatttaaataggaaccaatgttgaaagctcgcttatttatagaga 9112274  T
Q  201 ccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| ||||    
T  9112275 ccttaaacataattaacccttaaat 9112299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 30982790 - 30983013
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  30982790 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtcttggtcagcattctgttaacctagtcagcacagtttgac 30982889  T
Q  101 ggcaaggacc-aaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    || ||||||| ||||||||||||||| ||| || ||| |||| |||||||||||||||||| | ||||||||||||||| |||||| ||||||||||  |    
T  30982890 gggaaggaccaaaacttacaaacggaaaaaaacattgaggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgta-tg 30982988  T
Q  200 accttaaacataattaaccctaaaa 224  Q
    |||||||||||||||||||||||||    
T  30982989 accttaaacataattaaccctaaaa 30983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3117870 - 3117645
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtca-----cttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagt 95  Q
    |||||||| ||||||||| |||||| |||||||||||     ||||||||||||||||  |||||||  |||||||||||||||||||| ||||||||||    
T  3117870 aacatatgctgtcatttaccacatgtcagccatgtcatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctaatcagcacagt 3117771  T
Q  96 ttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgt 195  Q
    ||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||||     
T  3117770 ttgacggcaaggaccaaacttacaaacggaacaaaacgttggggatgaaaaatttaataaaatttaaatagggatcaatgttgaaagcttgcttatttgc 3117671  T
Q  196 agggaccttaaacataattaacccta 221  Q
     |||||||||||||||||||||||||    
T  3117670 cgggaccttaaacataattaacccta 3117645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 3118909 - 3119124
Alignment:
Q  4 atatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggc 103  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||||||| ||||||||||||||    
T  3118909 atatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtgacatgtctaagtcagcattctgttaacctagtcaacacagtttgacggc 3119008  T
Q  104 aaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    |||||||||||||||||||  | ||| | ||||||||| |||||||||||||||||||||||||| | |||||| ||||||| ||||||| || | ||||    
T  3119009 aaggaccaaacttacaaacaaaaaaaaatgttggggatgaaaaatttaataaaatttaaatagggtcaaatgttaaaagctcgcttatttataagaacct 3119108  T
Q  204 taaacataattaaccc 219  Q
    ||||||||||||||||    
T  3119109 taaacataattaaccc 3119124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 30982516 - 30982311
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||  ||||||||||||| ||||| |||||||||||||||||||||| ||    
T  30982516 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtctatgtggcatgtcttggtcaacattccgttagcctagtcagcacagtttaac 30982417  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||| ||| |||||||||||||| ||| |||||||| || |||||||||||| ||||| | ||||||||||||||| |||||| ||||||||||||||    
T  30982416 ggcaagtaccgaacttacaaacggaaaaaaacgttgggaatgaaaaatttaatataattttattagggaccaatgttggaagctcgcttatttgtaggga 30982317  T
Q  201 ccttaa 206  Q
    ||||||    
T  30982316 ccttaa 30982311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 32318111 - 32317882
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttg-------aaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcaca 93  Q
    |||||||||||||||||| || |||||||||||||||||||       ||||||||||||  |||||||  |||||||||||||||||||||||||||||    
T  32318111 aacatatgatgtcatttaccatatgacagccatgtcacttgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctagtcagcaca 32318012  T
Q  94 gtttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttattt 193  Q
    ||||||||||| ||||||||||||| |||||| ||| || ||| | || ||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  32318011 gtttgacggca-ggaccaaacttaccaacggaaaaa-acattgcg-atgaaaaatttaataaaatttaaataggaaccaatgttggaagctcgcttattt 32317915  T
Q  194 gtagggaccttaaacataattaaccctaaaatg 226  Q
     ||||||| |||||| |||||||||||||||||    
T  32317914 atagggactttaaacctaattaaccctaaaatg 32317882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32319344 - 32319562
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| || |||||||||||||||| |||||||  |||| ||  ||||||||| ||||||||||||||  ||||||| ||    
T  32319344 aacatatgatgtcatttaccacatg-caaccatgtcacttgaaatatccatgtggcatgcctgagtcagcattttgttagcctagtcactacagtttaac 32319442  T
Q  101 ggcaaggaccaaacttacaaacggataaaga--cgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    |||||||||||||||||||||| || ||| |  |||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||| || |    
T  32319443 ggcaaggaccaaacttacaaactgaaaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaatgctcgcttatttataag 32319542  T
Q  199 gaccttaaacataattaacc 218  Q
    |||||||| |||||||||||    
T  32319543 gaccttaagcataattaacc 32319562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9111464 - 9111246
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  ||||||||||||||||| ||||||||||| ||||||    
T  9111464 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcttagtcagcacaatttgac 9111365  T
Q  101 ggcaaggaccaaacttacaaacg--gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    |||||||||  |||||  |||||   | ||| |||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||  |||||| || |    
T  9111364 ggcaaggac--aacttgtaaacgaaaaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatgttggaagctcgtttatttataag 9111267  T
Q  199 gaccttaaacataattaaccc 219  Q
     || |||||||||||||||||    
T  9111266 aactttaaacataattaaccc 9111246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 32319921 - 32320132
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||| || ||  |||||||  ||||||||| |||||| ||||||| |||||||||||    
T  32319921 aacatatgatgtcatttaccacatggcagccatgccacttgaaatgttcacgtggcatgtctgagtcagcattttgttagtctagtcaacacagtttgac 32320020  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||| |||||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||||  ||||||  | |||    
T  32320021 ggcaagaaccaaacttacaaacggaaaaaaacgtt-gggatgaaaaatttaataaaatttaaatagggatcaatgttgaatgctcgtttatttaca-gga 32320118  T
Q  201 ccttaaacataatt 214  Q
    ||||||| ||||||    
T  32320119 ccttaaatataatt 32320132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 42488178 - 42488268
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    ||||||||  |||||||||||||||||||| |||| || |||||||||| | ||| ||||| ||||||||| ||||||||||||| |||||    
T  42488178 gttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaacacacctatttttagggacctaaaacataattaactctaaa 42488268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 3104772 - 3104686
Alignment:
Q  137 gggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    |||||||||||||||||||||||||| || | || ||||||| || | | ||||||| ||||||||| |||||||||||| ||||||    
T  3104772 gggataaaaaatttaataaaatttaagtatgaactaatgttggaaacacgcttatttatagggacctaaaacataattaaacctaaa 3104686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 20721741 - 20721823
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| || |||| |||||||||| | | | ||||| ||||||||| ||||||||||||||| |||||    
T  20721741 aaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacccaaaaat 20721823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 33001359 - 33001457
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||  |||||| ||||||| || | |   ||||| ||||||||| ||||||||||||||    
T  33001359 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagcagggactaatgttggaaacacgtctatttatagggacctaaaacataattaacc 33001457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 23787418 - 23787314
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||| |||||  |||||||||||||||||||| | ||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  23787418 aacggaaaaaaacgtaggggaccaaaaatttaataaaatttaagtggggactaatgttggaaacacgcctatttatagggacctaaaacataattaaccc 23787319  T
Q  220 taaaa 224  Q
     ||||    
T  23787318 aaaaa 23787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 43933244 - 43933330
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||| ||||||||||||||||| ||| ||| |||||||||| | | | ||||| || |||||| ||| |||||||||||    
T  43933244 gttggggataaagaatttaataaaatttaagtagagactaatgttgaaaacacgcctatttatacggacctaaaaaataattaaccc 43933330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 21622030 - 21621969
Alignment:
Q  156 aatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    ||||||| |||| || |||||||||||||||| ||||||||||||||| ||||||| |||||    
T  21622030 aatttaagtaggaactaatgttgaaagctcacatatttgtagggacctaaaacatatttaac 21621969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 1373339 - 1373255
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaatga 227  Q
    |||||||||||||||||||  ||||||| ||||||| || |   | ||||| ||||||||| ||||||||| |||||||||||||    
T  1373339 aaaaatttaataaaatttatgtagggactaatgttggaaacatgcctatttatagggacctaaaacataatcaaccctaaaatga 1373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 43931927 - 43931840
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||||||||  |||||||||||||||||||| ||| ||| ||| |||||| | |   ||||| ||||||||| ||||||||||||||    
T  43931927 acgttggggaccaaaaatttaataaaatttaagtagagactaatattgaaaacaccgctatttatagggacctaaaacataattaacc 43931840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 44493997 - 44494096
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||||| |||  |||||||||||||||||||| ||||||| ||||||| || | | |  |||| || |||||| |||||||||||||||    
T  44493997 aacggaaaaaaacgttgaggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgccaatttataaggacctaaaacataattaaccc 44494096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 3105939 - 3106005
Alignment:
Q  154 aaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||| ||||||| ||||||| || | ||| ||||| ||||||||| ||||||||||||||||    
T  3105939 aaaatttaagtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaaccct 3106005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 20721045 - 20721142
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgtt-gaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| |||||| ||||  |  | ||||| ||||||||| |||||||||||||    
T  20721045 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaatgt-gcctatttatagggacctaaaacataattaac 20721142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 44492665 - 44492579
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||| | |||||||||||||||||| || |||  ||||||| || | | | ||||| ||||||||| ||||||||||||||||    
T  44492665 ttggggatcacaaatttaataaaatttaagtatggattaatgttggaaacgcgcctatttatagggacctaaaacataattaaccct 44492579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 21439083 - 21438994
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||| ||  ||| ||||||| || | | | ||||| |||||| || ||||||||||||||||    
T  21439083 acgttggggaccaaaaatttaataaaatttaagtatagactaatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 21438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 20719545 - 20719617
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||| || | | | ||||| |||||||||    
T  20719545 acgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacct 20719617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 34477204 - 34477266
Alignment:
Q  99 acggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaa 162  Q
    ||||||||||| ||| |||||| |||| ||| |||||||| || ||||||||||||||||||||    
T  34477204 acggcaaggactaaatttacaa-cggacaaaaacgttgggaatcaaaaatttaataaaatttaa 34477266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 20701049 - 20701007
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaa 162  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||    
T  20701049 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaa 20701007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 1373720 - 1373756
Alignment:
Q  142 aaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  1373720 aaaaaatttaataaaatttaagtagggactaatgttg 1373756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 6e-83; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28163129 - 28162906
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||   || ||| ||||| |||||||||||||||||||||||| ||||||    
T  28163129 aacatatgatgtcatttaccacatgacagtcatgtcacttgaaatgtccatgtggtatatctgggtcaacattctgttagcctagtcagcacaatttgac 28163030  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||| |||||||| |||||| ||||||||||| ||    
T  28163029 ggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttaatagggatcaatgttggaagctcgcttatttgtagaga 28162930  T
Q  201 ccttaaacataattaaccctaaaa 224  Q
    ||||||||||||||||||||||||    
T  28162929 ccttaaacataattaaccctaaaa 28162906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13508762 - 13508543
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||  |||| |||||||||||||||||||||||||    
T  13508762 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtcttggtcaagattccgttagcctagtcagcacagtttgac 13508663  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || ||||||||||||||||||||||  || ||||||||||| ||||||||||| |||||| | |||||||||||||||||||||| |||||||||| |||    
T  13508662 ggtaaggaccaaacttacaaacggaagaaaacgttggggatgaaaaatttaattaaattttagtagggaccaatgttgaaagctcgcttatttgta-gga 13508564  T
Q  201 ccttaaacataattaacccta 221  Q
    |||||||||||||||||||||    
T  13508563 ccttaaacataattaacccta 13508543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 48738403 - 48738181
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||| || |||||||||||||||||| || |||    
T  48738403 aacatatgatgtcatttaccacatgacagctatgtcacttgaaatgtccatgtggcatgtcttggtcagcaatccgttagcctagtcagcacaattggac 48738304  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || ||||||||||||| |||||||| ||| ||||||||||  |||||||||||||||||| | || ||| ||||||||||||||| ||||||||||||||    
T  48738303 ggtaaggaccaaactttcaaacggaaaaaaacgttggggaagaaaaatttaataaaattttagtacggatcaatgttgaaagctcgcttatttgtaggga 48738204  T
Q  201 ccttaaacataattaaccctaaa 223  Q
    |||||||||| ||||||||||||    
T  48738203 ccttaaacatgattaaccctaaa 48738181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 34512448 - 34512226
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||   |||||| ||| ||||||| |||||||||||||||||||||||||    
T  34512448 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtcgtatgtctgggttagcattccgttagcctagtcagcacagtttgac 34512349  T
Q  101 ggcaaggaccaaacttacaaacg---gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtag 197  Q
    |||||||||||||||||||||||    | ||| || |||||||| |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  34512348 ggcaaggaccaaacttacaaacgaaaaaaaaaaacattggggatgaaaaatttaataaaattttaatagggaacaatgttgaaagctcgcttatttgtag 34512249  T
Q  198 ggaccttaaacataattaaccct 220  Q
    ||||||||||||||| |||||||    
T  34512248 ggaccttaaacataactaaccct 34512226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 44451981 - 44451757
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||||  |||||||  || |||||||||||||||||||||||||||||||||    
T  44451981 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgttcatgtggcatgtctgagttagcattctgttagcctagtcagcacagtttgac 44451882  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgta-ggg 199  Q
    |||||||| ||||||||||||| || ||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||  || ||| || |||    
T  44451881 ggcaaggatcaaacttacaaacagaaaaaaatgttggggatgaaaaatttaataaaatttaaataggaaccaatgttgaaaactcgtttctttatagggg 44451782  T
Q  200 accttaaacataattaaccctaaaa 224  Q
    |||||||||||||||||||||||||    
T  44451781 accttaaacataattaaccctaaaa 44451757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28164122 - 28164338
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| |  ||||||  |||||||||||||||||||||||||||||||||||||    
T  28164122 aacatatgatgtcatttatcacatgttagccatgtcacttgaaatgtccatttggcatgtcagggtcagcattctgttagcctagtcagcacagtttgac 28164221  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
     | || || |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||| || |||||||  |||||||||| ||    
T  28164222 agtaaagatcaaacttacaaacggaaaaaaacattggggataaaaaatttaataaaattttaatagggaccaatattaaaagctcgtttatttgtagaga 28164321  T
Q  201 ccttaaacataattaac 217  Q
    | |||||||||||||||    
T  28164322 cgttaaacataattaac 28164338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 220
Target Start/End: Original strand, 34513487 - 34513651
Alignment:
Q  56 catgtcttggtcagcattctgttagcctagtcagcacagtttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataa 155  Q
    ||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  34513487 catgtctggatcaacattccgttagcctagtcagcacagtttgacggcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataa 34513586  T
Q  156 aatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  34513587 aattttaatagggaccaatgttggaagctcgcttatttgtagggaccttaaacataattaaccct 34513651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 35061312 - 35061411
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||| ||||| |||||||||||||||||||| ||||||| |||||||||| | | | ||||| ||||||||| |||||||||||||||    
T  35061312 aacggaaaaaaacgtttgggatcaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccc 35061411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 33688473 - 33688373
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| |||| || ||||||| || | ||| ||||| ||||||||| |||||||||||||||    
T  33688473 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtaggaactaatgttggaaacgcacctatttatagggacctaaaacataattaaccc 33688374  T
Q  220 t 220  Q
    |    
T  33688373 t 33688373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 10322829 - 10322914
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||  |||||||||||||||||||| ||||||| ||||||| || ||| | ||||| ||||||||| |||||||||||||||    
T  10322829 ttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaactcgcctatttatagggacctaaaacataattaaccc 10322914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 31318063 - 31318153
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||  || | | | ||||| ||||||||| |||||||||||||||||    
T  31318063 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacccta 31318153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 44208673 - 44208571
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| |||||||||| | |   ||||| ||  ||||| |||||||||||||||    
T  44208673 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgtctatttataaagacctaaaacataattaaccc 44208574  T
Q  220 taa 222  Q
    |||    
T  44208573 taa 44208571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 40171410 - 40171495
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||| ||||||||||||||||||||| ||| ||  ||||||| || | ||| ||||| ||| |||||||||||||||||||||    
T  40171410 ttggggacaaaaaatttaataaaatttaagtagagattaatgttggaaacgcacctatttatagagaccttaaacataattaaccc 40171495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 31470737 - 31470657
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    |||||||||||||||||||| ||||||| |||||||||| |   | ||||| || |||||| |||||||||||||||||||    
T  31470737 aaaaatttaataaaatttaagtagggactaatgttgaaaacatgcctatttataaggacctaaaacataattaaccctaaa 31470657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34513417 - 34513469
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgt 53  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||||||||    
T  34513417 aacatatgatgtcatttaccaaatggcagccatgtcacttgaaatgtccatgt 34513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 45046734 - 45046813
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    |||||||||||||||||||| ||||||| ||||||| || | |   ||||| ||||||||||||| ||||||||||||||    
T  45046734 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggaccttaaagataattaaccctaa 45046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 35054971 - 35054877
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    ||||||||||  |||||||||||||||||||| |||| || ||||||||||   |   ||||| ||||||||| |||||||||||||||| ||||    
T  35054971 acgttggggaccaaaaatttaataaaatttaagtaggaactaatgttgaaaatgcgtctatttatagggacctaaaacataattaacccttaaat 35054877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 53572039 - 53572125
Alignment:
Q  136 ggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    |||||| |||||||||||||||||||| ||| ||| |||||| ||| | ||| ||||| |||| |||| ||| ||||||||||||||    
T  53572039 ggggatcaaaaatttaataaaatttaagtagagactaatgttaaaaacacacctatttataggaacctaaaatataattaaccctaa 53572125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 13086449 - 13086526
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||| | ||||| ||||||||||   | | ||||| |||| |||||||||||||||||||||    
T  13086449 aaaaatttaataaaatttaagttgggactaatgttgaaaatgcgcctatttataggaaccttaaacataattaaccct 13086526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 31316322 - 31316242
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataatt 214  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||| || | ||| ||||| || ||| || ||||||||||    
T  31316322 ttggagataaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 31316242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 11669891 - 11669818
Alignment:
Q  147 atttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||||||| ||||||| || | | | | ||| ||||||||| ||||| ||||||||||    
T  11669891 atttaataaaatttaaatagggactaatgttggaaacgcgcctttttatagggacctaaaacacaattaaccct 11669818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 44209992 - 44210081
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||| |||||||||||||||||||| ||  ||| |||||| ||| | | | ||||| ||||||| | |||||| |||||||||    
T  44209992 acgttggggatcaaaaatttaataaaatttaagtaaagactaatgttaaaaacgcgcctatttatagggacgtaaaacatgattaaccct 44210081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 45045276 - 45045199
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||| ||||||||||||||||||||| ||||||| ||   | | ||||| |||| || ||||||||||||||||||    
T  45045276 aaaaatataataaaatttaaatagggactaatgttggaaatgcgcatatttataggaactttaaacataattaaccct 45045199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 15562715 - 15562628
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||||  ||||||| |||||| ||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  15562715 acgttggggaccaaaaattcaataaa-tttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 15562628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 40170158 - 40170070
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||||   ||||| |||||||||||||||| |||| ||||||| || |   | |||||||| |||||| |||||||||||||||    
T  40170158 acgttggggactgaaaatataataaaatttaaatatggactaatgttggaaacaagcctatttgtaaggacctaaaacataattaaccc 40170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 25244118 - 25244196
Alignment:
Q  138 ggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaa 216  Q
    |||||||||||||||||||||||||||||| |  ||||||| || | | | ||||| |||||||   ||||||||||||    
T  25244118 ggataaaaaatttaataaaatttaaataggaattaatgttggaaacgcgcctatttatagggactcaaaacataattaa 25244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 25421851 - 25421766
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    ||||||||||||| |||||||||||||||||| || ||||   ||||||||   ||| ||||| || |||||| |||||||||||||    
T  25421851 acgttggggataataaatttaataaaatttaagtaaggactgttgttgaaaatgcacctatttata-ggacctaaaacataattaac 25421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 53568938 - 53568852
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||  |||||||||||||||||||| ||  ||  |||||||||| | | | ||||| |||| |||| |||||||||||||||    
T  53568938 gttggggaccaaaaatttaataaaatttaagtaaagattaatgttgaaaacacgcctatttataggaacctaaaacataattaaccc 53568852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 25423204 - 25423285
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||  ||| ||||||||||| ||| ||||    
T  25423204 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttataggatcctaaaacataattagccccaaaa 25423285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 15157686 - 15157654
Alignment:
Q  189 tatttgtagggaccttaaacataattaacccta 221  Q
    ||||||||||||||||||||||| |||||||||    
T  15157686 tatttgtagggaccttaaacatatttaacccta 15157654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3865584 - 3865361
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  |||| |||||||||||||||||||||||||||||||    
T  3865584 aacatatgatgtcatttagcacatggcagccatgtcacttgaaatgtccatgtggcatgtctgagtcaacattctgttagcctagtcagcacagtttgac 3865485  T
Q  101 ggcaaggaccaaacttacaaac-ggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||||||||||||||||| | | ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||     
T  3865484 ggcaaggaccaaacttacaaacagaaaaaaaacgttggggatgaaaaatttaataaaatttaaattgggaccaatgttgaaagctcgcttatttatagga 3865385  T
Q  200 accttaaacataattaaccctaaa 223  Q
    || |||||||||||||||||||||    
T  3865384 actttaaacataattaaccctaaa 3865361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44893750 - 44893531
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||| ||||| |||||| |||||||||||||| ||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||    
T  44893750 aacatatgatgttatttaccacatggcagccatgtcacttaaaatgtccatgtggcatgtctgggtcagcattcagttagcctagtcagcacagtttgac 44893651  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||| ||| ||| ||||| ||||| |||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||||    
T  44893650 ggcaaggaccaaacttacaaagggaaaaaaacgttagggatgaaaaatttaataaaattttaatatggaccaatgttggaagctcgcttatttgtaggga 44893551  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  44893550 ccttaaacataattaaccct 44893531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 44894810 - 44895028
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  44894810 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtgacatgtctgggtcatcattccgttagcctagtcagcacagtttgac 44894909  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| | ||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||| |||    
T  44894910 ggcaaggaccaaacttacaaacggaaaaaaatgttagggatgaaaaatttaataaaattttaatagggaccaatgttggaagctcggttatttgta-gga 44895008  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  44895009 ccttaaacataattaaccct 44895028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32243572 - 32243348
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||||||  |||||||  |||| ||||||||| ||||||||| |||||||||||    
T  32243572 aacatatgatgtcatttaccacatggcaaccatgtcacttgaaatgtccatgtggcatgtctgagtcaacattctgttcgcctagtcaacacagtttgac 32243473  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||||| ||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||    
T  32243472 ggcaaggatcaaacttacaaaccgaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttgaaagctcgcttatttatagaga 32243373  T
Q  201 ccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||| ||| ||||    
T  32243372 ccttaaacataattaatccttaaat 32243348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30133927 - 30134148
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||| ||||  |||||||  ||| |||||| |||||||||||||||||||||||||    
T  30133927 aacatatgatgtcatttaccacatggcagtcatgtcacttgaaatgtcaatgtggcatgtctgagtcggcattccgttagcctagtcagcacagtttgac 30134026  T
Q  101 ggcaaggaccaaacttacaaacg--gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
     ||||||||||||||||||||||   | ||| | ||||||||| |||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||    
T  30134027 agcaaggaccaaacttacaaacgaaaaaaaaaatgttggggatgaaaaatttaataaaattttaatagagatcaatgttgaaagctcgcttatttgtagg 30134126  T
Q  199 gaccttaaacataattaaccct 220  Q
     |||||||||||||||||||||    
T  30134127 aaccttaaacataattaaccct 30134148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 225
Target Start/End: Original strand, 3866818 - 3866988
Alignment:
Q  56 catgtcttggtcagcattctgttagcctagtcagcacagtttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataa 155  Q
    |||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  3866818 catgtctgagtcaacattctgttagcctagtcagcacaatttgacggcaaggaccaaacttacaaacggaaaaa-acgttggggatgaaaaatttaataa 3866916  T
Q  156 aatttaaatagggaccaatgttgaaagctcacttatt--tgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||| ||||| |||||||||||||||||    
T  3866917 aatttaaatagggaccaatgttgaaagctcacttatttatatagggactttaaatataattaaccctaaaat 3866988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 6243377 - 6243202
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtc---ttggtcagcattctgttagcctagtcagcacagttt 97  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||   | | |||||||||||||| |||||||||||||||||    
T  6243377 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtcgactggatcagcattctgttaacctagtcagcacagttt 6243278  T
Q  98 gacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaa 173  Q
    |||||||| ||||||| ||||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||    
T  6243277 gacggcaatgaccaaatttacaaacggataaaaacattgaggatgaaaaatttaataaaatttaaatagggaccaa 6243202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 32244797 - 32245015
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||  ||||||   ||||| |||||||||||||| ||||||    
T  32244797 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtcaatgtgacatgtctgagtcagctaactgttggcctagtcagcacaatttgac 32244896  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| ||||||||||  ||||| | ||| |||||| |||| ||||||||||||||||||||||||||| |||| ||| ||||||  |||||| || | |    
T  32244897 ggcaatgaccaaacttgtaaacgaaaaaaaacgttgaggatgaaaaatttaataaaatttaaatagggatcaatattggaagctcgtttatttataagaa 32244996  T
Q  201 ccttaaacataattaaccc 219  Q
    | |||||||||||||||||    
T  32244997 ctttaaacataattaaccc 32245015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 6244452 - 6244604
Alignment:
Q  4 atatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggc 103  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||||||||  ||||||| ||||| |||| |||||||||||||| ||||||||||||||    
T  6244452 atatgatgtcatttaccacatggcagccatgtcacctgaaatgtccatgtggcatgtctgggtcaacattttgttagcctagtcatcacagtttgacggc 6244551  T
Q  104 aaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataa 155  Q
    ||||||||  ||||||||||| | ||| || |||||||| |||||||||||||    
T  6244552 aaggaccactcttacaaacggaaaaaaaactttggggatgaaaaatttaataa 6244604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 39308374 - 39308271
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||| ||||||||||  |||||||||||||||||||| ||||||| || ||||||| | |   ||||| |||||||||||||||||||||||||    
T  39308374 aacggataaaaacgttggggaccaaaaatttaataaaatttaagtagggactaaggttgaaaacacgtctatttatagggaccttaaacataattaaccc 39308275  T
Q  220 taaa 223  Q
    ||||    
T  39308274 taaa 39308271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 13324048 - 13324153
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| || |||||||| |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||    
T  13324048 aacggaaaaaaacattggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaacataattaaccc 13324147  T
Q  220 taaaat 225  Q
    ||||||    
T  13324148 taaaat 13324153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 42816103 - 42816014
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||| |||| | | ||||| ||||||||||||||||||||||||||    
T  42816103 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaagcacgcgtatttatagggaccttaaacataattaaccct 42816014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 37705921 - 37705832
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||||||| | | | ||||| ||||||||| ||||||||||||||||    
T  37705921 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaaccct 37705832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 37707220 - 37707320
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||| |||||||||||||||||||| ||||||| ||||||| || | | | | ||| ||||||||| |||||||||||||||    
T  37707220 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctgtttatagggacctaaaacataattaaccc 37707319  T
Q  220 t 220  Q
    |    
T  37707320 t 37707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 13322982 - 13322879
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| ||||||| || |   | ||||| ||||||||| |||||||||||||||    
T  13322982 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacatgcctatttatagggacctaaaacataattaaccc 13322883  T
Q  220 taaa 223  Q
    ||||    
T  13322882 taaa 13322879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 24451265 - 24451176
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| ||| ||||||||||||    
T  24451265 acgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaatataattaaccct 24451176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 35368974 - 35368885
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||| |||||||||||||||||||||||| |||| || |||||||||| | | | ||||| |||| |||| ||||||||||||||||    
T  35368974 acgttggagataaaaaatttaataaaatttaagtaggtactaatgttgaaaacacgcctatttataggaacctaaaacataattaaccct 35368885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 21135118 - 21135018
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||| ||||||| |||||||||||||||||||| | ||||| |||||||||| | | | ||||| ||||||||  |||||||||||||||    
T  21135118 aacggaaaaaaacgatggggatcaaaaatttaataaaatttaagttgggactaatgttgaaaacacgcctatttatagggaccaaaaacataattaaccc 21135019  T
Q  220 t 220  Q
    |    
T  21135018 t 21135018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39338016 - 39338116
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| |||||| || |||||||||||||||    
T  39338016 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggatctaaaacataattaaccc 39338115  T
Q  220 t 220  Q
    |    
T  39338116 t 39338116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 1692684 - 1692581
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| | |||||||| | | | ||||| ||| ||||| | |||||||||||||    
T  1692684 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactactgttgaaaacacgcctatttatagagacctaatacataattaaccc 1692585  T
Q  220 taaa 223  Q
    ||||    
T  1692584 taaa 1692581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 21136461 - 21136543
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||| ||||||||    
T  21136461 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaatcctaaaat 21136543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 42817218 - 42817304
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||| ||||||||| ||||||| ||| ||||||| ||||||| || | | | ||||| ||||||||||||||||||||||||||    
T  42817218 ttggggacaaaaaatttcataaaatataagtagggactaatgttggaaacacgcctatttatagggaccttaaacataattaaccct 42817304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 36062576 - 36062499
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||||||| ||| |||||||||| | | | ||||| || |||||| ||||||||||||||||    
T  36062576 aaaaatttaataaaatttaaatagagactaatgttgaaaacgcgcctatttataaggacctaaaacataattaaccct 36062499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 45022049 - 45021960
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||  |||||||||||||||||||   |||||| ||| ||| |||| ||| ||||| ||||||||| ||||||||||||||||    
T  45022049 acgttggggaccaaaaatttaataaaatttaggaagggactaatattggaagcacacgtatttatagggacctgaaacataattaaccct 45021960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 16472774 - 16472684
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    |||||| | |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| ||| ||||||||||| ||||    
T  16472774 ttgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaacccaaaaa 16472684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 16477345 - 16477255
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    |||||| | |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| ||| ||||||||||| ||||    
T  16477345 ttgggggtcaaaaatttaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacctaaaatataattaacccaaaaa 16477255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 39310582 - 39310716
Alignment:
Q  86 tcagcacagtttgacggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctc 185  Q
    |||||| | |||||||||| ||||||||   |  ||| || ||| ||||||||||  ||||||| |||||||||||| |||| |  |||||||||| |      
T  39310582 tcagcaaaatttgacggcagggaccaaatacattaactgacaaaaacgttggggaccaaaaattaaataaaatttaagtaggaattaatgttgaaaacgt 39310681  T
Q  186 acttatttgtagggaccttaaacataattaaccct 220  Q
     | ||||| ||||||||||||||||||||||||||    
T  39310682 gcctatttctagggaccttaaacataattaaccct 39310716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 35864180 - 35864257
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||| |||| || ||| || ||||| ||| ||||| |||||| || ||||||||||||||||    
T  35864180 aaaaatttaataaaatttaagtaggaactaatattaaaagcacacctatttatagggatctaaaacataattaaccct 35864257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 6247930 - 6247985
Alignment:
Q  170 ccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    ||||||||| ||| || ||||||||| |||||||||||||||||||||||| ||||    
T  6247930 ccaatgttggaagttcgcttatttgttgggaccttaaacataattaacccttaaat 6247985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 21575593 - 21575506
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||| |||||||||||||||||||| |||| || ||||||| || | |   ||||| || |||||| ||||||||||||||||    
T  21575593 gttggggatcaaaaatttaataaaatttaagtaggaactaatgttggaaacgcgtctatttataaggacctaaaacataattaaccct 21575506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 39336789 - 39336711
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    |||||||||||||||||||| ||||| | ||||||| ||   | | ||||| ||||||||| |||||||||||||||||    
T  39336789 aaaaatttaataaaatttaagtagggtctaatgttggaaatgcgcctatttatagggacctaaaacataattaacccta 39336711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 14835094 - 14835013
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaa 224  Q
    ||||||||| |||||||||| ||||||  ||| |||||| | | ||| ||| || |||||||||||||||||||||| ||||    
T  14835094 aaaaatttattaaaatttaagtagggattaatattgaaaacacgcttgtttataaggaccttaaacataattaacccaaaaa 14835013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 24452597 - 24452694
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    |||||| ||| |||| |||||  ||||| |||||||||||||| ||||||| ||||||| || | | | ||||| ||||||| | |||||||||||||    
T  24452597 aacggaaaaaaacgtcggggaccaaaaaattaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacttaaaacataattaac 24452694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 22959789 - 22959867
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    ||||||||| |||| |||||||||| || ||||||  || | |   ||||| |||||||||||||||||||||||||||    
T  22959789 aaaaatttattaaattttaaataggaactaatgttagaaacacgtctatttatagggaccttaaacataattaacccta 22959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 35370209 - 35370285
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||| ||||  |||| || |||||||||| | | | ||||| ||||||||| ||||||||||||||||    
T  35370209 aaaaatttaataaa-tttatgtaggaactaatgttgaaaacacgcctatttatagggacctaaaacataattaaccct 35370285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 35862835 - 35862794
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaattta 161  Q
    |||||| ||| ||||||||||| |||||||||||||||||||    
T  35862835 aacggaaaaaaacgttggggatcaaaaatttaataaaattta 35862794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 14840484 - 14840556
Alignment:
Q  148 tttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||| |||||||| | || |||| ||||||| || | | | |||||||| |||||||||||||||||||||||    
T  14840484 tttattaaaattttagtaaggactaatgttggaaacgcgcctatttgtaaggaccttaaacataattaaccct 14840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 36063932 - 36063968
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagg 167  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  36063932 acgttggggatcaaaaatttaataaaatttaagtagg 36063968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 289759 - 289981
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  289759 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 289858  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| || | |    
T  289859 ggcaaggaccaaacttacaaacgaaaaaaaacgttggagataaaaaatttaataaaatttaaatagggaccaatgttaaatgctcgcttatttata-gaa 289957  T
Q  201 ccttaaacataattaaccctaaaa 224  Q
    |||||||||||| |||||| ||||    
T  289958 ccttaaacataactaacccaaaaa 289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3913154 - 3912937
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||    
T  3913154 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcatgtctgggtcagcattctgttagcctagttagcacagtttgac 3913055  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
     |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || |||   | ||||||||||||||    
T  3913054 cgcaaggaccaaacttacaaacggataaaaacgtt-gggatgaaaaatttaataaaatttaaatagggaccaatattaaaaatccgcttatttgtaggga 3912956  T
Q  201 ccttaaacataattaaccc 219  Q
     ||||||||||||||||||    
T  3912955 gcttaaacataattaaccc 3912937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 21108468 - 21108683
Alignment:
Q  4 atatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgacggc 103  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||  |||||||     
T  21108468 atatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtgacatgtcttggtcaacattccgttagcctagtcagcacaacttgacggt 21108567  T
Q  104 aaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    || ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||| ||||    
T  21108568 aaagaccaaacttacaaacggaaaaaaatgttggggatgaaaaatttaataaaattttagtagggaccaatgttggaagctcgcttatttgtaggaacct 21108667  T
Q  204 taaacataattaaccc 219  Q
    ||||||||||||||||    
T  21108668 taaacataattaaccc 21108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 5086821 - 5087039
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||| ||  |||| ||  ||||||||||||||||||||||||||||| ||||||    
T  5086821 aacatatgatgtcatttaccacatggcagccatatcacttgaaatgtccacgtgtcatgcctgagtcagcattctgttagcctagtcagcacaatttgac 5086920  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||| ||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||| | |||| ||||||| |||||| ||||||| |||||    
T  5086921 ggcaaggatcaaacttacaaacggaaaaaaaacgttggggatgaaaaatttaataaaatttaaa-aaggacgaatgttggaagctcgcttatttataggg 5087019  T
Q  200 accttaaacataattaaccc 219  Q
    ||||||||||||||||||||    
T  5087020 accttaaacataattaaccc 5087039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 288894 - 288677
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  288894 aacatatgatgtcatttaccacatgtcagccatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 288795  T
Q  101 ggcaaggaccaaacttacaaacgga-taaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||||||||||||| ||| ||  ||| ||||| ||||| |||||||||||||||||| |||| |||| |||| || ||| || ||||||  |||      
T  288794 ggcaaggaccaaacttaccaacagagaaaaaacgtt-gggatgaaaaatttaataaaattttaataaggactaatgctggaagttcgcttattgatagaa 288696  T
Q  200 accttaaacataattaacc 218  Q
    || |||||| |||||||||    
T  288695 actttaaacttaattaacc 288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3914820 - 3914931
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||| ||||| ||| ||  ||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||    
T  3914820 aacatatggtgtcaattaccatctgacagccatgtcacttgaaatgtccatgtggcatgtctgggtcagcattccgttagcctagtcagcacagtttgac 3914919  T
Q  101 ggcaaggaccaa 112  Q
     | |||||||||    
T  3914920 agtaaggaccaa 3914931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 3914956 - 3915074
Alignment:
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| ||||||||||| ||||||| |||  |||||||||| ||||||||||||||||| |||||||||| |||| || |||||   |||||||||||||    
T  3914956 ggcaatgaccaaacttataaacggaaaaaatcgttggggatgaaaaatttaataaaattaaaatagggactaatgatggaagcttgtttatttgtaggga 3915055  T
Q  201 ccttaaacataattaaccc 219  Q
    |||||||||||||||||||    
T  3915056 ccttaaacataattaaccc 3915074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 15119342 - 15119442
Alignment:
Q  124 gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    |||||| ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||||||    
T  15119342 gataaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacctatttatagggaccttaaacataattaaccctaaa 15119441  T
Q  224 a 224  Q
    |    
T  15119442 a 15119442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 7855371 - 7855486
Alignment:
Q  105 aggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacctt 204  Q
    ||||||||  || |||||||  ||| ||||||||||  |||||||||||||||||||| ||||||| |||||||||| | | | ||||| ||||||| |     
T  7855371 aggaccaattttgcaaacggcaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacacgcctatttatagggactta 7855470  T
Q  205 aaacataattaaccct 220  Q
    ||||||||||||||||    
T  7855471 aaacataattaaccct 7855486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 22971680 - 22971591
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||| || | | | ||||| |||||| || ||||||||||||||||    
T  22971680 acgttggggataaaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 22971591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 23816718 - 23816807
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||| || | | | ||||| |||||| || ||||||||||||||||    
T  23816718 acgttggggataaaaaatttaataaaatttaagtagggactgatgttggaaacgcgcctatttatagggatctaaaacataattaaccct 23816807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 7852323 - 7852241
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| ||||||  |||||||||| | | | ||||| ||||||||| ||||||||||||||| |||||    
T  7852323 aaaaatttaataaaatttaagtagggattaatgttgaaaacacgcctatttatagggacctaaaacataattaacccaaaaat 7852241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 17246589 - 17246677
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||||  |||||||||||||||||||| ||||||| | ||||  || | | | ||||| ||| ||||| |||||||||||||||    
T  17246589 acgttggggaccaaaaatttaataaaatttaagtagggactattgttagaaacacgcctatttatagagacctaaaacataattaaccc 17246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 8230987 - 8230951
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagg 167  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  8230987 acgttggggatcaaaaatttaataaaatttaagtagg 8230951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 22972306 - 22972386
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    |||||||||||||||| ||| ||||||| ||| |||||| | | | ||||| || | |||| ||||||||||||| |||||    
T  22972306 aaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaactctaaa 22972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 23816092 - 23816012
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaa 223  Q
    |||||||||||||||| ||| ||||||| ||| |||||| | | | ||||| || | |||| ||||||||||||| |||||    
T  23816092 aaaaatttaataaaatataagtagggactaatattgaaaacacgcctatttataagaacctaaaacataattaactctaaa 23816012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31992048 - 31992265
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||| ||||||    
T  31992048 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtgtcatgtctgggtcagcactctgttagcctagtcagcacaatttgac 31992147  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
     |||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||    
T  31992148 agcaaggaccaaacttacaaacggataaaaatgtt-gggatgaaaaatttaataaaatttaaataggaatcaatgttgaaagctcgcttatttgtaggga 31992246  T
Q  201 ccttaaacataattaaccc 219  Q
    || ||||||||||||||||    
T  31992247 ccataaacataattaaccc 31992265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 52701056 - 52700838
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  52701056 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatatctatgtggcatgtcttggtcagcattttgttagcctagtcagcacagtttgac 52700957  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| | |||| | |||||||| |||||| |||||||||| |||    
T  52700956 ggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattttagtaggaatcaatgttggaagctcgcttatttgtaagga 52700857  T
Q  201 ccttaaacataattaaccc 219  Q
    |||||||||||||||||||    
T  52700856 ccttaaacataattaaccc 52700838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 52702060 - 52702277
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  52702060 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccatgtggcatgtcttggtcagcattctgttagcctagtcagcacagtttgac 52702159  T
Q  101 ggcaaggaccaaacttacaaacg--gataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagg 198  Q
    |||||||||| |||||||||| |   | ||| |||| |||||| |||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||    
T  52702160 ggcaaggaccgaacttacaaatgaaaaaaaaaacgtcggggatgaaaaatttaatataattttaatagggaccaatgttggaagctcacctatttgtagg 52702259  T
Q  199 gaccttaaacataattaa 216  Q
    ||||||||||||||||||    
T  52702260 gaccttaaacataattaa 52702277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8575199 - 8574980
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||  ||||||||| ||||||||||||||||||||||| ||    
T  8575199 aacatatgatgttatttaccacatgacagccatgtcacttgaaatgtccatgttgcatgtctaagtcagcattttgttagcctagtcagcacagtttaac 8575100  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    ||||| ||||||||||||||| || | ||| ||||||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  8575099 ggcaatgaccaaacttacaaatggaaaaaaaacgttggggatgaaaaatttaataaaatttaaatatggatcaatgttggaagctcacttatttgtaggg 8575000  T
Q  200 accttaaacataattaaccc 219  Q
    ||||||||||||||||||||    
T  8574999 accttaaacataattaaccc 8574980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 41927166 - 41926949
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||  |||||||  ||||||||| |||||||||||||||||||||| ||     
T  41927166 aacatatgatgtcatttaccacatgacagtcatgtcatttgaaatgtccatgtggcatgtctgagtcagcattttgttagcctagtcagcacagttcgat 41927067  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| | ||||||| | |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  41927066 ggcaaggaccaaacttacaaacggaaaaaaatgttgggggtgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttataggga 41926967  T
Q  201 ccttaaacataattaacc 218  Q
    ||||||||||||||||||    
T  41926966 ccttaaacataattaacc 41926949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 44557002 - 44557203
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| ||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  44557002 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 44557101  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  44557102 ggcaaggaccaaacttacaaacgaaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttaaaagctcgcttatttataggga 44557201  T
Q  201 cc 202  Q
    ||    
T  44557202 cc 44557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25233261 - 25233480
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||| |||||  |||||||||||| |||||||||||||||||    
T  25233261 aacatatgatgtcatttaacacatggcagccatgtcacttgaaatgtccatgtggcatgtctgggtcaatattctgttagccaagtcagcacagtttgac 25233360  T
Q  101 ggcaaggaccaaacttacaaacgg-ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggg 199  Q
    |||||||||||||||||||||||| | ||| |||| |  ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  25233361 ggcaaggaccaaacttacaaacggaaaaaaaacgtcgaagatgaaaaatttaataaaatttaaatagggaccaatgttggaagctcgcttatttgtaggg 25233460  T
Q  200 accttaaacataattaaccc 219  Q
    ||||||||||||| ||||||    
T  25233461 accttaaacataagtaaccc 25233480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33476556 - 33476780
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||||||||||||    
T  33476556 aacatatgatgtcatttaccacatggcaaccatgtcacttgaaatgtctatgtggcatgtctgagtcaacattctgttagcctagtcagcacagtttgac 33476655  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||| ||| |||||||||||| || ||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||    
T  33476656 ggcaaagactaaacttacaaaccgaaaaaaacgttggggaggaaaaatttaataaaatttaaatagggaccaatattgaaagctcgcttatttatagaga 33476755  T
Q  201 ccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| ||||    
T  33476756 ccttaaacataattaacccttaaat 33476780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44555812 - 44555592
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||  ||||||||||||||||||||| ||||||| ||||||    
T  44555812 aacatatgatgtcatttaccacatgacagccatgtcacttgaaatgtccacgtggcatgtctgagtcagcattctgttagcctagccagcacaatttgac 44555713  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||||||| ||| | ||||||||| ||||| |||||||||||||||||| ||||||||||| |||| ||||||||| || |||    
T  44555712 ggcaaggaccaaacttacaaacggaaaaaaatgttggggatgaaaaacttaataaaatttaaatagagaccaatgttggaagcccacttatttatatgga 44555613  T
Q  201 ccttaaacataattaacccta 221  Q
    | ||||| |||||||||||||    
T  44555612 ctttaaatataattaacccta 44555592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 41928238 - 41928455
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||  ||||  ||| ||||||||||||||||||| ||||||    
T  41928238 aacatatgatgtcatttaccacatgacagccatatcacttgaaatgtccatgtggcatgtctgagtcaatattatgttagcctagtcagcacaatttgac 41928337  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
     |||| ||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||  |||| |    
T  41928338 agcaatgaccaaacttacaaacgaaaaaaaacgttggggatgaaaaatttaataaaatttaaataaggaccaatgttaaaagctcgcttatt--taggaa 41928435  T
Q  201 ccttaaacataattaaccct 220  Q
    ||||||||||||||||||||    
T  41928436 ccttaaacataattaaccct 41928455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8576303 - 8576521
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagc-ctagtcagcacagtttga 99  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  |||||| ||||||||||  ||||||||| |||||||    
T  8576303 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgagtcagctttctgttagctttagtcagcatagtttga 8576402  T
Q  100 cggcaaggaccaaacttacaaacgga--taaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtag 197  Q
    |||||||||||||||||||||||  |   ||| ||||||||||  |||||||||||||||||||||||||||| ||||||| |||||  ||||||||||     
T  8576403 cggcaaggaccaaacttacaaacaaaagaaaaaacgttggggaagaaaaatttaataaaatttaaatagggactaatgttggaagcttgcttatttgtac 8576502  T
Q  198 ggaccttaaacataattaa 216  Q
    |||||||||||||||||||    
T  8576503 ggaccttaaacataattaa 8576521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31990962 - 31990752
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||     |||||||||||||||||| |||||  ||||| |  |||||||||||| ||||||||||| |||||||||||    
T  31990962 aacatatgatgtcatttaccacat-----ccatgtcacttgaaatgttcatgtggcatgtttgagtcagcattctgctagcctagtcaccacagtttgac 31990868  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    |||||| |||||||||||||||  | ||| ||||||| ||||||||||||| |||||||||||||| ||||||| || ||| ||  ||||||||||||||    
T  31990867 ggcaagaaccaaacttacaaacaaaaaaaaacgttggtgataaaaaatttattaaaatttaaatagagaccaatattaaaaacttgcttatttgtaggga 31990768  T
Q  201 ccttaaacataattaa 216  Q
    ||| ||||||||||||    
T  31990767 cctgaaacataattaa 31990752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25353357 - 25353552
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||    
T  25353357 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccatgtggcatgtctgagtcagcattctgttagcctagtcagcacagtttgac 25353456  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||||||||||||| |||                ||||||  ||| |||||||||||||||| |||||||| |||||| ||||||| || |||    
T  25353457 ggcaaggaccaaacttacaaatgga----------------aaaaaaagtaaaaaaatttaaatagggatcaatgttggaagctcgcttatttataagga 25353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 33475365 - 33475148
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||  |||||||  ||||||   ||||||| ||||||| |||| ||||||    
T  33475365 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtcaatgtggcatgtctgagtcagctaactgttagtctagtcaacacaatttgac 33475266  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    ||||||||||| ||||  ||||||| ||| |||||| |||| ||||||||||| ||||||||||||||| |||||||| ||||||  |||||| || | |    
T  33475265 ggcaaggaccagacttgtaaacggaaaaaaacgttgaggatgaaaaatttaat-aaatttaaatagggatcaatgttggaagctcgtttatttataagaa 33475167  T
Q  201 ccttaaacataattaaccc 219  Q
    | |||||||||||||||||    
T  33475166 ctttaaacataattaaccc 33475148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 19831016 - 19831208
Alignment:
Q  26 acagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagttt-gacggcaaggaccaaacttacaaacgg 124  Q
    |||||||||||| || ||||| ||||||  ||||||    ||| ||||| |||| |||||| | |||||||| ||||||||||||||||   |  |||||    
T  19831016 acagccatgtcatttaaaatgcccatgtggcatgtccgcatcatcattccgttaacctagtaaacacagttttgacggcaaggaccaaatacattaacgg 19831115  T
Q  125 ataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    | ||| || ||||  |  |||||||||||||||||||| ||||||| ||||||| || | ||||||||| |||||||||||||||||||||||    
T  19831116 acaaaaacattggaaaccaaaaatttaataaaatttaagtagggactaatgttggaaacacacttatttatagggaccttaaacataattaac 19831208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 116721 - 116626
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataatta 215  Q
    |||||| ||| ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | | ||||||| ||||||||| |||||||||||    
T  116721 aacggaaaaaaacgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcttatttatagggacctaaaacataatta 116626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 45234513 - 45234415
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||| |||||||||||||||||||| ||||||| ||||||| || | ||| ||||| || |||||| |||||||||||||||    
T  45234513 aacggaaaaaaacgttggggatcaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttata-ggacctaaaacataattaaccc 45234415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 27867873 - 27867773
Alignment:
Q  121 acggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||| ||| |||||| |||  |||||||||||||||||||| || | || |||||||||| ||| | ||||| ||||||||| ||||||||||||||||    
T  27867873 acggaaaaaaacgttgaggaccaaaaatttaataaaatttaagtatgaactaatgttgaaaactcgcctatttatagggacctaaaacataattaaccct 27867774  T
Q  221 a 221  Q
    |    
T  27867773 a 27867773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 37180073 - 37180164
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||| |||||||||||||    
T  37180073 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacgtaattaaccctaa 37180164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 53244798 - 53244710
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    |||||||  |||||||||| |||||||||| ||||||| |||||||||| |   | |||||||| |||||| |||||||||||||||||    
T  53244798 gttggggtaaaaaaatttattaaaatttaagtagggactaatgttgaaaacgtgcctatttgtatggacctcaaacataattaacccta 53244710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 41786583 - 41786674
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||||| || |  || |||||  ||||| || ||||||||||||||||||    
T  41786583 acgttggggatcaaaaatttaataaaatttaagtagggaataatgttggaaacaaacctatttacagggatctaaaacataattaaccctaa 41786674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 53246660 - 53246730
Alignment:
Q  146 aatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaa 216  Q
    |||||| |||||||||| ||||||  |||||||||| | ||||||||| || |||||||||||||||||||    
T  53246660 aatttattaaaatttaagtagggattaatgttgaaaacacacttatttatatggaccttaaacataattaa 53246730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 117953 - 118030
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||||||||||||||||||| ||| ||| ||||||| || | | | ||||| ||||||||| ||||||||||||||||    
T  117953 aaaaatttaataaaatttaagtagagactaatgttggaaacacgcctatttatagggacctaaaacataattaaccct 118030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 32942775 - 32942686
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||  || |   | | ||| ||||||||| ||||||||||||||||    
T  32942775 acgttggggatcaaaaatttaataaaatttaagtagggactaatgttagaaacatgcctctttatagggacctaaaacataattaaccct 32942686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 44558087 - 44558163
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||||||||||||||||| ||||||| ||||||| || | |   ||||| ||||||||| |||||||||||||||    
T  44558087 aaaaatttaataaaatttaagtagggactaatgttggaaacgcgtctatttatagggacctaaaacataattaaccc 44558163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 3670702 - 3670805
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| |||||| |||  |||||| ||||||||||||| ||| || |||||||| || | |   ||||| || ||||||||||||||||||||||    
T  3670702 aacggacaaaaacgttgaggaccaaaaatataataaaatttaagtagagatcaatgttggaaacacgtctatttataaggaccttaaacataattaaccc 3670801  T
Q  220 taaa 223  Q
    ||||    
T  3670802 taaa 3670805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 32944127 - 32944206
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaa 222  Q
    |||||||||||||||||||| ||| ||| |||||| ||| |   | ||||| ||||||||| ||||||||||||||||||    
T  32944127 aaaaatttaataaaatttaagtagagactaatgttaaaaacgtgcctatttatagggacctaaaacataattaaccctaa 32944206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 50614330 - 50614243
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||  |||||||||||||||||||| ||||||| |||||||||| | | | ||||| ||| ||| | ||||||| ||||||||    
T  50614330 gttggggaccaaaaatttaataaaatttaagtagggactaatgttgaaaacgcgcctatttatagagacttaaaacatatttaaccct 50614243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 32148107 - 32148193
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaac 217  Q
    |||||| ||| |||||||||||||||||||||| ||| || ||||||| ||   | | ||||| ||||||||| |||||||||||||    
T  32148107 acgttgaggacaaaaaatttaataaaatttaaacaggaactaatgttggaaatacgcctatttatagggacctaaaacataattaac 32148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 32146783 - 32146698
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    ||||||||||||||||||||||||||||| || | || ||||||| ||   | | ||||| || |||||| |||||||||||||||    
T  32146783 ttggggataaaaaatttaataaaatttaagtatgaactaatgttggaaatacgcctatttatatggacctaaaacataattaaccc 32146698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 19669483 - 19669436
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttg 178  Q
    ||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  19669483 acgttggagatcaaaaatttaataaaatttaagtagggactaatgttg 19669436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 54185835 - 54185920
Alignment:
Q  133 gttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacc 218  Q
    ||||||||| |||||||||||||||||||| || |||  |||||||||| | | | ||||| || | || | ||||||||||||||    
T  54185835 gttggggatcaaaaatttaataaaatttaagtatggattaatgttgaaaacacgcctatttataagaacataaaacataattaacc 54185920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 37178725 - 37178653
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    ||||||||||| |||||||||||||||||||| || |||  ||||||| || | | | ||||| |||||||||    
T  37178725 acgttggggatcaaaaatttaataaaatttaagtatggattaatgttggaaacacgcctatttatagggacct 37178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 54185376 - 54185304
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataatta 215  Q
    |||||||||||||||||||| |||| || ||||||| || | | | ||||| || |||||| |||||||||||    
T  54185376 aaaaatttaataaaatttaagtaggaactaatgttggaaacgcgcctatttataaggacctaaaacataatta 54185304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 282829 - 282609
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||  |  ||| |||  ||||  |||||||||||||||||| |||| ||||||    
T  282829 aacatatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacatggcatttctgagtcaaaattctgttagcctagtcaacacaatttgac 282730  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
    || |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||    
T  282729 ggtaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaatttaaatagggaccaatgttggaaactcgcttatttataggga 282630  T
Q  201 ccttaaacataattaacccta 221  Q
    | |||||||||||||||||||    
T  282629 ctttaaacataattaacccta 282609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 283637 - 283855
Alignment:
Q  1 aacatatgatgtcatttatcacatgacagccatgtcacttgaaatgtccatgtaacatgtcttggtcagcattctgttagcctagtcagcacagtttgac 100  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||  |  ||||||   ||||||||| |||||||| ||||| |||||||||||    
T  283637 aacacatgatgtcatttaccacatggcagccatgtcacttgaaatgtccacatggcatgtcagagtcagcattttgttagcc-agtcaacacagtttgac 283735  T
Q  101 ggcaaggaccaaacttacaaacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtaggga 200  Q
     |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||||| || |||    
T  283736 agcaaggaccaaacttacaaacggaaaaaaacgttggggatgaaaaatttaataaaattaaaatagggaccaatattaaaagctcgcttatttataagga 283835  T
Q  201 ccttaaacataattaaccct 220  Q
    | ||||||||||||||||||    
T  283836 ctttaaacataattaaccct 283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 100947 - 100853
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  100947 acgttggggatgaaaaatttaataaaatttatatagggaccaatattggaagctctcttatttgtagggatcttaaacataattaaccctaaaat 100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 100959 - 101031
Alignment:
Q  148 tttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    ||||||||||||||||||||||||||||||  || ||  ||||||||||||||||||||||||||||||||||    
T  100959 tttaataaaatttaaatagggaccaatgttagaaacttgcttatttgtagggaccttaaacataattaaccct 101031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 239305 - 239206
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccc 219  Q
    |||||| ||| ||||||||||  ||||||| |||||||||||  ||||||| ||||||| || | ||| ||||| ||||||||| |||||||||||||||    
T  239305 aacggaaaaaaacgttggggaccaaaaattgaataaaatttaggtagggactaatgttggaaacgcacctatttatagggacctaaaacataattaaccc 239206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 5607 - 5517
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaacccta 221  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||  || | | | ||||| ||||||||| |||||||||||||||||    
T  5607 acgttggggaccaaaaatttaataaaatttaagtagggactaatgttagaaacgcgcctatttatagggacctaaaacataattaacccta 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 7375 - 7455
Alignment:
Q  134 ttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataatt 214  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||| || | ||| ||||| || ||| || ||||||||||    
T  7375 ttggagataaaaaatttaataaaatttaagtagggactaatgttggaaacgcacctatttataaggatctaaaacataatt 7455  T

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Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 25570 - 25652
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| || |||| |||||||||| | | | ||||| ||||||||| ||||||||||||||| |||||    
T  25570 aaaaatttaataaaatttaagtatggactaatgttgaaaacgcgcctatttatagggacctaaaacataattaacccaaaaat 25652  T

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Target: scaffold0097; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 23383 - 23455
Alignment:
Q  131 acgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggacct 203  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||| || | | | ||||| |||||||||    
T  23383 acgttggggatcaaaaatgtaataaaatttaagtagggactaatgttggaaacgcgcctatttatagggacct 23455  T

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Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 49276 - 49358
Alignment:
Q  143 aaaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccctaaaat 225  Q
    |||||||||||||||||||| ||||||| ||||||| || | | | ||||| ||||||||| |||||||||||||||| ||||    
T  49276 aaaaatttaataaaatttaagtagggactaatgttggaaacacgcctatttatagggacctaaaacataattaacccttaaat 49358  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 38877 - 38938
Alignment:
Q  120 aacggataaagacgttggggataaaaaatttaataaaatttaaatagggaccaatgttgaaa 181  Q
    |||||| ||| || |||||||| |||||||||||||||||||  |||| || ||||||||||    
T  38877 aacggaaaaaaacattggggatcaaaaatttaataaaatttatgtaggaactaatgttgaaa 38938  T

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Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 34747 - 34671
Alignment:
Q  144 aaaatttaataaaatttaaatagggaccaatgttgaaagctcacttatttgtagggaccttaaacataattaaccct 220  Q
    |||| |||||| ||||||| ||||||  |||||||||| | ||| ||||| ||| ||||| ||| ||||||||||||    
T  34747 aaaaattaatacaatttaagtagggattaatgttgaaaacacacctatttatagagacctaaaatataattaaccct 34671  T

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