View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18530_high_3 (Length: 383)
Name: NF18530_high_3
Description: NF18530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18530_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 48286548 - 48286251
Alignment:
| Q |
18 |
acttggaacacggaaggaaccgaggtggaattctggtatggaaggttgatagagaatgtagataactgcggcggcgaggatgaaaaggaagaagagaatg |
117 |
Q |
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| T |
48286548 |
acttggaacacggaaagaaccgaggtggaattctggtatggaaggttggtagagaatgtagataactgcggcggcgaggatgaaaaggaagaagagaatg |
48286449 |
T |
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| Q |
118 |
aggaagatgatgcaaaatgtgcaacaacataggcgacaataattacgtttcttgggttttggtcggaaagaaggtgggagagaagggtttcgtgttggaa |
217 |
Q |
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| T |
48286448 |
aggaagatgatgcaaaatgtgcaacaaaataggcgacaataattacgtttcttgggttttggtcggaaagaaggtgggagagaagggtttcgtgttggaa |
48286349 |
T |
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| Q |
218 |
gcggtttttgttggatgtttgggtctctataacaaggtggttttggtagtattattggtttttgttcgggcgatggttgctgcattgtgattttgtgt |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286348 |
gcggtttttgttggatgtttgggtctctataacaaggtggttttggtagtattattggtttttgttcgggcgatggttgctgcattgtgattttgtgt |
48286251 |
T |
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