View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18532_high_24 (Length: 334)
Name: NF18532_high_24
Description: NF18532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18532_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 13 - 309
Target Start/End: Original strand, 19572313 - 19572597
Alignment:
| Q |
13 |
aatatgctggaatgttgttccatttgtacgtttgaggtatcatttcactttgatttacacttattagtgacttcattcaaccgttggtgatggttttctt |
112 |
Q |
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| T |
19572313 |
aatatgctggaatgttgttccatttgtacgtttgaggtatcatttcactttgatttacacttattagtgacttcattcaaccgttggtgatggttttctt |
19572412 |
T |
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| Q |
113 |
cattaaaatagtttctaattcttgatggttgatatcattatccttgggaatttgatgatgcaacttttgttagttaccgtttctggacagattgttggat |
212 |
Q |
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| T |
19572413 |
cattaaaatagtttctaattcttgatggttgatatcattatccttgggaatttgatgatgcaacttttgttagttaccgtttctggac------------ |
19572500 |
T |
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| Q |
213 |
aaagaagaataacgtgtttaaactaaggtgaagtccaattgatttaaacgttatggttgggccattacttttttcaccttgtgagtttctggcgtgc |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19572501 |
aaagaagaataacgtgtttaaactaaggtgaagtccaattgatttaaacgttaaggttgggccattacttttttcaccttgtgagtttctggcgtgc |
19572597 |
T |
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