View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18534_high_5 (Length: 238)
Name: NF18534_high_5
Description: NF18534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18534_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14849586 - 14849365
Alignment:
| Q |
1 |
ttcaactatcttaacaaactcaggcatacctttcataacctgcattgcccagttaaaaaatttaagtatctcacataccaactaaccaaagaaatatgat |
100 |
Q |
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| T |
14849586 |
ttcaactatcttaacaaactcaggcatacctttcataaactgcattgcccagttaaaaaatttaagtatctcacataccaactaaccaaagaaatatgat |
14849487 |
T |
|
| Q |
101 |
aaaatcaccaactgcaatgaatttaaactttatgacataaaacataaaatgtagatacaaaaagagacaccagagaattataatttaatggaaataaaga |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14849486 |
aaaatcaccaactgcaatgaatttaaactt--tgacataaaacataaaatgtagatacaaaaagagacaccagagaattataatttaatggaaataaaga |
14849389 |
T |
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| Q |
201 |
attgtccttgaacagaaagtactg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
14849388 |
attgtccttgaacagaaagtactg |
14849365 |
T |
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