View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18534_low_6 (Length: 238)
Name: NF18534_low_6
Description: NF18534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18534_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 32011327 - 32011533
Alignment:
| Q |
17 |
atgaatcacatatcttacctatctttcatttaacatatatctctctccttaaaatgannnnnnnnnctttgaaggcaaccaatcatatcaacataacttt |
116 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32011327 |
atgagtcacatatcttacctatctttcatttaacatatatctctctccttaaaatgatttttttttctttgaaggcaaccaatcatatcaacataacttt |
32011426 |
T |
|
| Q |
117 |
gtgaactaaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgtt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32011427 |
gtgaactaaaattgtaattaataacaagaataattttgttgttatggagtcttataaaaattccatcaaatcttctacatatatataaacatcacatgtt |
32011526 |
T |
|
| Q |
217 |
gtgtttt |
223 |
Q |
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||||||| |
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| T |
32011527 |
gtgtttt |
32011533 |
T |
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