View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18536_high_21 (Length: 229)
Name: NF18536_high_21
Description: NF18536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18536_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 5649808 - 5650003
Alignment:
| Q |
16 |
atgtaaaatgtttgagtgttcactagcaaaatctatcaatctaacacattaatagacaccgccaaaaatttacctcgataaattcgtgaaacaaatcagc |
115 |
Q |
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| T |
5649808 |
atgtaaaatgtttgagtgttcactagcaaaatctatcaatctaacacattaatagacaccgccaaaaatttacctcgataaattcgtgaaacaaatcagc |
5649907 |
T |
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| Q |
116 |
aaatgtggctacagtaaatatgaaaacagtttgacatcttagcctaatagggaataaaaggtacgtatatgtgctggctatttttcatatgtcatc |
211 |
Q |
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| T |
5649908 |
aaatgtggctacagtaaatatgaaaacagtttgacatcttagcctaatagggaataaaaggtacgtatatgtgctggctatttttcatatgtcatc |
5650003 |
T |
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