View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18537_low_15 (Length: 393)
Name: NF18537_low_15
Description: NF18537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18537_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 10 - 357
Target Start/End: Original strand, 37028914 - 37029261
Alignment:
| Q |
10 |
aagaaaattgagatggaagaaaaattgaaatgttatcattgagggaaaagttagataatgcatttgttttgtgctatcagtattaggaatggacagaacc |
109 |
Q |
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| T |
37028914 |
aagaaaattgagatggaagaaaaattgaaatgttatcattgagggaaaagttagataatgcatttgttttgtgctatcagtattaggaatggacagaacc |
37029013 |
T |
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| Q |
110 |
tatgcctaacaaaggatgtgattgtattaatttatgaactttttatttttgagtttatcaacggacgtaaaccacttttagagtgtttgagaaaactcag |
209 |
Q |
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| T |
37029014 |
tatgcctaacaaaggatgtgattgtattaatttatgaactttttatttttgagtttatcaacggacgtaaaccacttttagagtgtttgagaaaactcag |
37029113 |
T |
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| Q |
210 |
gaagtctttgcacatatttataagttatttttagtttatttcgataaattctttaaattatatcctaagaaagcaaaagttatttattggtgctgcagat |
309 |
Q |
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| T |
37029114 |
aaagtctttgcacatatttataagttatttttagtttatttcgataaattctttaaattatatcctaagaaagcaaaagttatttattggtgctgcagat |
37029213 |
T |
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| Q |
310 |
gaacaccaagaggacacacatccgtattttcttttttaccgtgttaac |
357 |
Q |
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| T |
37029214 |
gaacaccaagaggacacacatccgtattttcttttttaccgtgttaac |
37029261 |
T |
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