View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18537_low_23 (Length: 358)
Name: NF18537_low_23
Description: NF18537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18537_low_23 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 30252387 - 30252738
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30252387 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
30252486 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30252487 |
aagagtttgacaattgacaaatgtggtggcattgcgtgtgcattctcatcctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
30252586 |
T |
|
| Q |
201 |
gccaaatgttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactatttccaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30252587 |
gccaaatgttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactgtttccaa |
30252686 |
T |
|
| Q |
301 |
ctttataactactaactatggattgattttcttttagttctgctacctatgc |
352 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30252687 |
ctttataactgctaactatggattgattttcttttagttctgctacctatgc |
30252738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 30172313 - 30172614
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||| | ||||||||||||||||| ||||||| ||| |||| |||||| |
|
|
| T |
30172313 |
ggttggaatgccccaccttgaactcttgaagctgtcaaatatcaactctagaaaactttgggatgacaaccttccaggtcatttttgcattcaaaacatg |
30172412 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
| |||||||||||||||||||||| |||||| | |||||||||||| |||||||||||| ||||||||||||| || ||||||| ||| ||||||||| |
|
|
| T |
30172413 |
agaagtttgacaattgacaaatgtgatggcatagcgtacgcattctcatcctcagtggctagagaacttgtaaacctgaagtatcttgagtttagtaatt |
30172512 |
T |
|
| Q |
201 |
gccaaatgttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactatttccaa |
300 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |||||||||||||| | |||| |||||||||||| | ||||||||||||||||||||||||| | ||||| |
|
|
| T |
30172513 |
gccaaatgttggaggacatctttgtctcagatggaaagttgggtaatcttccttcatctcagaaacaattctctgatgatgaggtgagcactgtctccaa |
30172612 |
T |
|
| Q |
301 |
ct |
302 |
Q |
| |
|
|| |
|
|
| T |
30172613 |
ct |
30172614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 30279853 - 30280146
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
|||||| |||||||| |||||| ||||| ||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||| |||| |||| | |
|
|
| T |
30279853 |
ggttgggatgccccatcttgaactcttggagctgtctaatatcacctctaggagattgtgggatgacaactttccaggtcattcttgcattcaaaacttg |
30279952 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
| ||||||||| ||||||||||||||| |||| | |||| |||| || |||||||||||| ||||||||||||| || | ||||| | |||| ||||| |
|
|
| T |
30279953 |
aggagtttgacgattgacaaatgtggtagcatagcttacacattttcgtcctcagtggctagagaacttgtaaacctgcaatatcttggcattaataatt |
30280052 |
T |
|
| Q |
201 |
gccaaatgttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactat |
294 |
Q |
| |
|
||| |||||||| | |||||| |||| |||||||| ||||| ||| | ||||| |||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
30280053 |
gcctgatgttggaagagatatttgtctccgatggaaatttgggcagtgtaacttcaactcagaaaccattttctgatgatgaggtgagcactat |
30280146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 30148012 - 30148305
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||||||||||||| ||| |||| ||||| |||| ||||| |||| ||||||||||| |||| |||| | |
|
|
| T |
30148012 |
ggttggaatgccccaccttgaactcttcaagctgtctaatatcacctctaggagattgtaggataacaactttccaggtcattcttgcattcaaaacttg |
30148111 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
| ||||||||| ||||||||||||||| |||| | |||| |||| || ||||||| |||| ||||||||||||| || | ||||| | |||| ||||| |
|
|
| T |
30148112 |
aggagtttgacgattgacaaatgtggtagcatagcttacacattttcgtcctcagttgctagagaacttgtaaacctgcaatatcttggcattaataatt |
30148211 |
T |
|
| Q |
201 |
gccaaatgttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactat |
294 |
Q |
| |
|
||| |||||||| | |||||| |||| |||||||| ||||| | ||| ||||| |||||| | |||| ||||||||||||||||||||||| |
|
|
| T |
30148212 |
gcctgatgttggaagagatatttgtctccgatggaaatttgggcaatctaacttcaactcagaaaccattttctgatgatgaggtgagcactat |
30148305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 30068515 - 30068747
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| |||||||||||||||| ||||| || |||||| ||||||||||||| ||| | || |||||||| |||| |||| | | ||||| |
|
|
| T |
30068515 |
atgccccaccttgaactcttgaagctgtctaagatcaattctaggaaactgtgggatgacaaactttcggggcattcttgcattcaaaacttgaggagtt |
30068614 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
|||||||||||||||||||| |||| | || ||||||||| ||||| ||||| ||| ||||||||| || || |||| |||||||||||||||||||| |
|
|
| T |
30068615 |
tgacaattgacaaatgtggtagcatagcctatgcattctcatcctcaatggctggagagcttgtaaacctgcagcatcttgagattagtaattgccaaat |
30068714 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagtt |
240 |
Q |
| |
|
||||||| ||| || |||| ||||||||||| |
|
|
| T |
30068715 |
gttggagcagataattgtctcagatggaaagtt |
30068747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30790578 - 30790813
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||| ||||||||||| || |||||| ||||||||||||| ||||| ||||||||||| || | |||| | |
|
|
| T |
30790578 |
ggttgggatgccccaccttgaactcttgaagctttctaatatcaattctaggaaactgtgggatgacaaacttccaggtcattcttgcatgcaaaacttg |
30790677 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
|||||||||||| |||||| |||| || ||| |||||||||||| ||||||||||| || | ||||| ||| || |||| | ||||||||||| |
|
|
| T |
30790678 |
aagagtttgacacttgacagatgttgtaacatatcgtacgcattctcatcctcagtggctggcgagttggtaaatttgaagcatcttgcgattagtaatt |
30790777 |
T |
|
| Q |
201 |
gccaaatgttggagggcatatttatctctgatggaa |
236 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||||| |
|
|
| T |
30790778 |
gccaaatgttggaggagatatttgtctcagatggaa |
30790813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 30023391 - 30023633
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30023391 |
atgccccaccttgaactattgaagctgtctaagatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30023490 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30023491 |
tgacaatggacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30023590 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagttgggaagtctt |
250 |
Q |
| |
|
|||||||| ||||||| |||| |||||| |||| || |||||| |
|
|
| T |
30023591 |
gttggaggacatatttgtctcagatggagagttcggcagtctt |
30023633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 30037306 - 30037064
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30037306 |
atgccccaccttgaactattgaagctgtctaacatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30037207 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30037206 |
tgacaatggacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30037107 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagttgggaagtctt |
250 |
Q |
| |
|
|||||||| ||||||| |||| |||||| |||| || |||||| |
|
|
| T |
30037106 |
gttggaggacatatttgtctcagatggagagttcggcagtctt |
30037064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 30118731 - 30118489
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30118731 |
atgccccaccttgaactattgaagctgtctaagatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30118632 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30118631 |
tgacaatggacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30118532 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagttgggaagtctt |
250 |
Q |
| |
|
|||||||| ||||||| |||| |||||| |||| || |||||| |
|
|
| T |
30118531 |
gttggaggacatatttgtctcagatggagagttcggcagtctt |
30118489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 30231444 - 30231202
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30231444 |
atgccccaccttgaactattgaagctgtctaacatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30231345 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30231344 |
tgacaatggacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30231245 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagttgggaagtctt |
250 |
Q |
| |
|
|||||||| ||||||| |||| |||||| |||| || |||||| |
|
|
| T |
30231244 |
gttggaggacatatttgtctcagatggagagttcggcagtctt |
30231202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 344
Target Start/End: Complemental strand, 30183865 - 30183529
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||| ||||| ||||| || |||||| |||||||||| || ||||| ||| |||||| || | |||| | | |||| |
|
|
| T |
30183865 |
atgccccaccttgaactattgaagctctctaagatcaaatctaggaaactgtgggatgataaacttccgagtcgttcttggatgcaaaacttgagaagtt |
30183766 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| ||| ||||| | ||| | | | ||||||| |||| || || | |||| |||||||| || || | || | |||||||||||||||||| |
|
|
| T |
30183765 |
tgacaatagacggatgtgataacatagcatgcatattctcatcctcggtcgccagagaatttgtaaacctgaagcaacttgtgattagtaattgccaaat |
30183666 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagttgggaagtctttcttcatctcagatatcattctctgatgatgaggtgagcactatttccaactttata |
307 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| |||||| ||| ||||||| | |||||||| |||||||||||| |||| ||||||||| | || |
|
|
| T |
30183665 |
gttggagggcatatttgtccctgatggaaagttgggtagtcttcctttgtctcagaaaccattctctaatgatgaggtgaacactgtttccaactctgta |
30183566 |
T |
|
| Q |
308 |
actactaactatggattgattttcttttagttctgct |
344 |
Q |
| |
|
| || ||||||| | ||||||| | ||| ||||||| |
|
|
| T |
30183565 |
aatattaactattgtatgattttatcttacttctgct |
30183529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 30081797 - 30082029
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30081797 |
atgccccaccttgaactattgaagctgtctaacatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30081896 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30081897 |
tgacaatggacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30081996 |
T |
|
| Q |
208 |
gttggagggcatatttatctctgatggaaagtt |
240 |
Q |
| |
|
|||||||| |||||| |||| |||||| |||| |
|
|
| T |
30081997 |
gttggaggaaatatttgtctcagatggagagtt |
30082029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 30106794 - 30106574
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||| ||| |||||| | |||||||||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30106794 |
atgctccaccttgaactattgaagctgtctaagatcaattgcgagaaactgtgggatgacaaacttcgtagtcattctcgcatgcaaaacttgaagagtt |
30106695 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||||||| |||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| ||||||||||||||||||| |
|
|
| T |
30106694 |
tgacaatagacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaattgccaaat |
30106595 |
T |
|
| Q |
208 |
gttggagggcatatttatctc |
228 |
Q |
| |
|
|||||||| ||||||| |||| |
|
|
| T |
30106594 |
gttggaggacatatttgtctc |
30106574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 30133431 - 30133216
Alignment:
| Q |
8 |
atgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatcaagagtt |
107 |
Q |
| |
|
|||||||| |||||| | |||||| ||||||| ||||| | |||| ||||||||||||| |||| |||||||| | || | |||| | ||||||| |
|
|
| T |
30133431 |
atgccccaccttgaactattgaagttgtctaagatcaattgtgagaaactgtgggatgacaaacttctgagtcattctcgcatgcaaaacttgaagagtt |
30133332 |
T |
|
| Q |
108 |
tgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaattgccaaat |
207 |
Q |
| |
|
||| |||||||||||||||| |||| |||||||||||| ||||||| |||| ||||||||||||| || | | ||| |||||||||||| |||| | |
|
|
| T |
30133331 |
tgaaaattgacaaatgtggtagcatgagatacgcattctcatcctcagttgctagagaacttgtaaacctgaaatctcttaagattagtaatttccaatt |
30133232 |
T |
|
| Q |
208 |
gttggagggcatattt |
223 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
30133231 |
gttggaggacatattt |
30133216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30030390 - 30030609
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
|||||||||| |||| || || | ||||||||||||||| ||||| || | ||||| |||||||||| | | ||| |||||||| ||| |||| | |
|
|
| T |
30030390 |
ggttggaatgtcccaactggagaccttgaagctgtctaagatcaattcttgtaaattatgggatgacatacaatcgggttattcttgtgttcaaaacttg |
30030489 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
| ||||||||| |||||||||||| | || |||| ||||||| || |||||||| ||||||||||| | || | ||||| ||||||||||| | |
|
|
| T |
30030490 |
acaagtttgacagttgacaaatgtgataagataacttacatattctcatccgtagtggctagagaacttgtaaccctgcaatatcttgagattagtaact |
30030589 |
T |
|
| Q |
201 |
gccaaatgttggagggcata |
220 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
30030590 |
gccaaatgttggaggacata |
30030609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30224528 - 30224747
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgacaaccttcccggtcattcttgtattcgaaacatc |
100 |
Q |
| |
|
|||||||||| |||| || || | ||||||||||||||| ||||| || | ||||| |||||||||| | | ||| |||||||| ||| |||| | |
|
|
| T |
30224528 |
ggttggaatgtcccaactggagaccttgaagctgtctaagatcaattcttgtaaattatgggatgacatacaatcgggttattcttgtgttcaaaacttg |
30224627 |
T |
|
| Q |
101 |
aagagtttgacaattgacaaatgtggtggcattgattacgcattctcaccctcagtggctaaagaacttgtaaacttggagtatctcgagattagtaatt |
200 |
Q |
| |
|
| ||||||||| |||||||||||| | || |||| ||||||| || |||||||| ||||||||||| | || | ||||| ||||||||||| | |
|
|
| T |
30224628 |
acaagtttgacagttgacaaatgtgataagataacttacatattctcatccgtagtggctagagaacttgtaaccctgcaatatcttgagattagtaact |
30224727 |
T |
|
| Q |
201 |
gccaaatgttggagggcata |
220 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
30224728 |
gccaaatgttggaggacata |
30224747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30104424 - 30104491
Alignment:
| Q |
1 |
ggttggaatgccccagcttgaaatcttgaagctgtctaatatcaactcaaggaaattgtgggatgaca |
68 |
Q |
| |
|
|||||||||| |||| ||||| | ||||||||||||||| ||||| || ||||||| |||||||||| |
|
|
| T |
30104424 |
ggttggaatgtcccaacttgagaccttgaagctgtctaagatcaattcttggaaattatgggatgaca |
30104491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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