View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1853_low_1 (Length: 803)

Name: NF1853_low_1
Description: NF1853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1853_low_1
NF1853_low_1
[»] chr1 (61 HSPs)
chr1 (20-781)||(13345194-13345953)
chr1 (525-781)||(17359147-17359404)
chr1 (532-772)||(23037876-23038118)
chr1 (539-734)||(51473780-51473974)
chr1 (542-775)||(12208603-12208838)
chr1 (542-775)||(17610118-17610353)
chr1 (543-775)||(9401511-9401742)
chr1 (533-638)||(17837510-17837615)
chr1 (541-781)||(31235905-31236146)
chr1 (545-781)||(22664211-22664449)
chr1 (542-773)||(15543831-15544063)
chr1 (545-703)||(24281282-24281440)
chr1 (560-763)||(21666483-21666687)
chr1 (533-638)||(3591654-3591759)
chr1 (532-764)||(12012687-12012907)
chr1 (525-638)||(21449074-21449187)
chr1 (542-697)||(147633-147786)
chr1 (542-638)||(25405631-25405727)
chr1 (542-638)||(29242521-29242617)
chr1 (542-739)||(14779567-14779766)
chr1 (533-717)||(15813077-15813260)
chr1 (542-636)||(21847636-21847729)
chr1 (550-638)||(16787727-16787815)
chr1 (542-638)||(18736241-18736337)
chr1 (544-754)||(33190681-33190892)
chr1 (533-638)||(24306307-24306411)
chr1 (612-772)||(15807886-15808047)
chr1 (542-768)||(22622893-22623120)
chr1 (542-638)||(21987983-21988079)
chr1 (533-637)||(27117720-27117824)
chr1 (543-638)||(16179010-16179105)
chr1 (545-772)||(28008110-28008338)
chr1 (542-638)||(26648972-26649067)
chr1 (557-691)||(44795386-44795519)
chr1 (650-763)||(18100888-18101001)
chr1 (533-622)||(9787896-9787985)
chr1 (525-644)||(15813519-15813639)
chr1 (542-638)||(16069552-16069647)
chr1 (717-781)||(21334574-21334638)
chr1 (542-638)||(24267783-24267879)
chr1 (557-638)||(16916934-16917016)
chr1 (727-781)||(21449266-21449320)
chr1 (532-638)||(22620254-22620360)
chr1 (556-638)||(24214560-24214642)
chr1 (542-604)||(26540898-26540959)
chr1 (542-763)||(32382883-32383095)
chr1 (545-638)||(34480974-34481067)
chr1 (708-760)||(17121378-17121430)
chr1 (539-610)||(25958108-25958178)
chr1 (542-596)||(17121523-17121576)
chr1 (542-652)||(18825658-18825770)
chr1 (710-759)||(16069440-16069489)
chr1 (557-638)||(21334720-21334801)
chr1 (581-638)||(23179839-23179896)
chr1 (542-638)||(16359873-16359968)
chr1 (679-763)||(16916820-16916907)
chr1 (710-750)||(18529079-18529119)
chr1 (709-764)||(15813416-15813471)
chr1 (679-763)||(18825782-18825868)
chr1 (679-763)||(23179923-23180009)
chr1 (562-640)||(24054001-24054078)
[»] chr3 (62 HSPs)
chr3 (525-775)||(16245593-16245843)
chr3 (542-781)||(2167475-2167713)
chr3 (525-781)||(41508352-41508608)
chr3 (533-762)||(12805766-12805996)
chr3 (539-775)||(17438293-17438530)
chr3 (542-764)||(3116292-3116515)
chr3 (525-764)||(21301903-21302145)
chr3 (542-772)||(21303220-21303451)
chr3 (542-763)||(21325342-21325565)
chr3 (542-764)||(5508338-5508561)
chr3 (544-748)||(20429714-20429920)
chr3 (542-768)||(21825739-21825965)
chr3 (542-638)||(22349411-22349507)
chr3 (557-763)||(4650248-4650450)
chr3 (533-638)||(19171835-19171940)
chr3 (542-638)||(10917920-10918016)
chr3 (547-638)||(821515-821606)
chr3 (542-739)||(10744904-10745101)
chr3 (545-638)||(6289908-6290001)
chr3 (542-611)||(12759389-12759458)
chr3 (557-638)||(8557130-8557211)
chr3 (542-635)||(8770022-8770114)
chr3 (561-638)||(19925624-19925701)
chr3 (557-634)||(28728961-28729038)
chr3 (542-638)||(12411153-12411249)
chr3 (527-598)||(18458465-18458536)
chr3 (542-762)||(19908309-19908531)
chr3 (525-638)||(7478336-7478444)
chr3 (542-754)||(18736556-18736768)
chr3 (532-611)||(13908254-13908332)
chr3 (40-185)||(33229168-33229314)
chr3 (556-759)||(932758-932963)
chr3 (562-638)||(8889153-8889229)
chr3 (542-638)||(31286017-31286111)
chr3 (568-635)||(8765145-8765212)
chr3 (556-638)||(8319055-8319137)
chr3 (710-763)||(8770179-8770232)
chr3 (727-772)||(19171732-19171777)
chr3 (717-781)||(7494971-7495035)
chr3 (708-772)||(8143783-8143846)
chr3 (543-631)||(10923150-10923238)
chr3 (542-598)||(11518002-11518058)
chr3 (562-638)||(16229943-16230019)
chr3 (563-764)||(8445846-8446046)
chr3 (716-763)||(12754797-12754844)
chr3 (22-149)||(40168197-40168324)
chr3 (542-604)||(19706831-19706892)
chr3 (22-138)||(7900379-7900492)
chr3 (710-763)||(8765277-8765330)
chr3 (542-638)||(8143617-8143711)
chr3 (683-763)||(8170013-8170096)
chr3 (710-781)||(8319216-8319288)
chr3 (546-610)||(21019625-21019688)
chr3 (542-606)||(27542948-27543011)
chr3 (97-177)||(53300061-53300141)
chr3 (583-638)||(7495096-7495151)
chr3 (742-781)||(12411351-12411390)
chr3 (545-611)||(7147993-7148058)
chr3 (727-781)||(7478211-7478265)
chr3 (710-755)||(19925504-19925550)
chr3 (679-760)||(16229831-16229915)
chr3 (581-638)||(19167452-19167509)
[»] chr7 (91 HSPs)
chr7 (541-781)||(16365706-16365948)
chr7 (542-772)||(3734598-3734829)
chr7 (525-780)||(9731485-9731741)
chr7 (525-781)||(4785822-4786083)
chr7 (525-739)||(2350645-2350861)
chr7 (525-781)||(5108551-5108807)
chr7 (543-775)||(7492130-7492358)
chr7 (524-752)||(3329542-3329773)
chr7 (525-781)||(4818822-4819084)
chr7 (533-638)||(9864327-9864432)
chr7 (541-765)||(17153026-17153252)
chr7 (539-638)||(8979007-8979106)
chr7 (532-763)||(10586898-10587131)
chr7 (542-781)||(1848085-1848322)
chr7 (525-781)||(2563803-2564060)
chr7 (542-638)||(13759861-13759957)
chr7 (533-693)||(7318266-7318426)
chr7 (542-772)||(19153300-19153530)
chr7 (542-772)||(20752699-20752929)
chr7 (542-752)||(11221051-11221261)
chr7 (542-758)||(31492932-31493145)
chr7 (542-774)||(8053926-8054155)
chr7 (542-670)||(23099922-23100049)
chr7 (525-690)||(12181593-12181759)
chr7 (542-764)||(18662443-18662665)
chr7 (546-762)||(20582265-20582479)
chr7 (551-781)||(39273032-39273263)
chr7 (557-781)||(8313250-8313477)
chr7 (542-781)||(9574409-9574648)
chr7 (542-693)||(4986557-4986708)
chr7 (542-693)||(4990655-4990806)
chr7 (542-638)||(8054490-8054586)
chr7 (542-638)||(18368981-18369077)
chr7 (563-638)||(11803103-11803178)
chr7 (545-660)||(12329687-12329802)
chr7 (525-662)||(6042446-6042582)
chr7 (525-638)||(10584487-10584600)
chr7 (521-613)||(7397177-7397268)
chr7 (542-638)||(10937604-10937700)
chr7 (542-638)||(16297821-16297917)
chr7 (557-660)||(1584561-1584662)
chr7 (544-638)||(5530025-5530119)
chr7 (542-673)||(6013595-6013727)
chr7 (533-638)||(6005830-6005934)
chr7 (533-638)||(10648571-10648676)
chr7 (542-638)||(4579100-4579195)
chr7 (542-638)||(18449244-18449340)
chr7 (532-638)||(15869587-15869693)
chr7 (545-638)||(1587686-1587779)
chr7 (542-639)||(9500446-9500543)
chr7 (545-638)||(17077133-17077226)
chr7 (533-764)||(9130899-9131136)
chr7 (542-638)||(9866542-9866637)
chr7 (551-638)||(17203035-17203121)
chr7 (560-638)||(8877441-8877519)
chr7 (532-638)||(9245173-9245279)
chr7 (533-639)||(21885156-21885258)
chr7 (569-638)||(22339312-22339381)
chr7 (562-638)||(4449002-4449078)
chr7 (542-638)||(9916568-9916664)
chr7 (542-638)||(9924480-9924576)
chr7 (542-638)||(14195974-14196069)
chr7 (542-622)||(14755147-14755227)
chr7 (542-638)||(18495375-18495471)
chr7 (563-638)||(18467474-18467549)
chr7 (533-607)||(5797504-5797578)
chr7 (545-639)||(21227184-21227278)
chr7 (542-638)||(13418536-13418632)
chr7 (577-638)||(16059022-16059083)
chr7 (562-638)||(13277525-13277601)
chr7 (708-764)||(17829738-17829794)
chr7 (542-638)||(21912481-21912577)
chr7 (613-693)||(1584305-1584385)
chr7 (542-637)||(26134750-26134844)
chr7 (532-638)||(1872777-1872883)
chr7 (568-638)||(3191060-3191130)
chr7 (542-604)||(18661592-18661654)
chr7 (532-638)||(21230304-21230410)
chr7 (525-578)||(1814100-1814153)
chr7 (675-759)||(8293920-8294005)
chr7 (557-638)||(16306711-16306792)
chr7 (542-611)||(23093312-23093380)
chr7 (717-769)||(7397320-7397372)
chr7 (736-772)||(21227386-21227422)
chr7 (547-638)||(9261211-9261302)
chr7 (547-638)||(18466012-18466103)
chr7 (744-781)||(2350568-2350605)
chr7 (710-763)||(11803240-11803293)
chr7 (542-611)||(12391187-12391256)
chr7 (679-761)||(13418660-13418744)
chr7 (558-611)||(21102321-21102374)
[»] chr2 (55 HSPs)
chr2 (525-781)||(25618542-25618797)
chr2 (533-781)||(32085456-32085704)
chr2 (526-772)||(29719097-29719344)
chr2 (524-772)||(11382620-11382868)
chr2 (534-762)||(20174512-20174740)
chr2 (524-775)||(15339222-15339475)
chr2 (542-781)||(27908975-27909216)
chr2 (525-781)||(26603217-26603464)
chr2 (542-638)||(17743477-17743573)
chr2 (525-638)||(25888225-25888334)
chr2 (542-757)||(25196013-25196229)
chr2 (540-638)||(45621882-45621980)
chr2 (558-763)||(28925539-28925746)
chr2 (542-765)||(23011636-23011859)
chr2 (525-691)||(31804848-31805014)
chr2 (545-781)||(17349362-17349591)
chr2 (542-638)||(8503071-8503167)
chr2 (542-638)||(12953295-12953391)
chr2 (542-764)||(45553132-45553353)
chr2 (545-768)||(25885331-25885553)
chr2 (542-693)||(13776341-13776490)
chr2 (558-644)||(9774330-9774414)
chr2 (651-781)||(25887760-25887893)
chr2 (542-638)||(30411680-30411776)
chr2 (563-638)||(27418389-27418464)
chr2 (542-639)||(8447050-8447146)
chr2 (546-635)||(30900848-30900937)
chr2 (562-638)||(24090927-24091003)
chr2 (562-638)||(25535296-25535372)
chr2 (542-769)||(17889939-17890167)
chr2 (542-648)||(19200126-19200231)
chr2 (545-638)||(17635776-17635869)
chr2 (710-763)||(24090813-24090866)
chr2 (577-638)||(25920303-25920364)
chr2 (551-693)||(29027507-29027649)
chr2 (524-590)||(20173347-20173412)
chr2 (679-764)||(23933419-23933505)
chr2 (544-638)||(28770444-28770538)
chr2 (550-639)||(9239156-9239245)
chr2 (562-638)||(25530469-25530545)
chr2 (679-764)||(25530574-25530661)
chr2 (562-638)||(29142983-29143059)
chr2 (710-764)||(25535433-25535487)
chr2 (577-638)||(5777253-5777314)
chr2 (679-781)||(17675485-17675589)
chr2 (679-763)||(29143088-29143174)
chr2 (717-764)||(30411846-30411893)
chr2 (717-763)||(17198035-17198081)
chr2 (545-611)||(17675658-17675724)
chr2 (580-638)||(21078627-21078685)
chr2 (710-763)||(26667465-26667519)
chr2 (578-720)||(28606096-28606239)
chr2 (542-611)||(12557737-12557805)
chr2 (577-638)||(26667355-26667416)
chr2 (542-611)||(32440025-32440093)
[»] scaffold0155 (1 HSPs)
scaffold0155 (539-781)||(35851-36095)
[»] chr6 (61 HSPs)
chr6 (525-784)||(12183185-12183445)
chr6 (525-772)||(21672300-21672549)
chr6 (525-772)||(21679716-21679965)
chr6 (533-761)||(27737565-27737795)
chr6 (525-693)||(18075333-18075502)
chr6 (527-772)||(4339722-4339967)
chr6 (524-703)||(23143706-23143884)
chr6 (568-764)||(9838384-9838581)
chr6 (533-638)||(9726015-9726120)
chr6 (533-740)||(8241270-8241475)
chr6 (545-772)||(23645633-23645861)
chr6 (542-638)||(9516787-9516883)
chr6 (542-780)||(23844322-23844562)
chr6 (533-766)||(28933532-28933766)
chr6 (528-632)||(17729140-17729244)
chr6 (542-759)||(17826974-17827189)
chr6 (535-638)||(22566163-22566266)
chr6 (545-784)||(5624645-5624886)
chr6 (533-637)||(25927305-25927409)
chr6 (556-763)||(23231859-23232066)
chr6 (533-635)||(21907425-21907527)
chr6 (556-662)||(22410304-22410410)
chr6 (533-739)||(22567833-22568039)
chr6 (539-763)||(27124369-27124592)
chr6 (533-720)||(11176943-11177131)
chr6 (545-638)||(17299832-17299925)
chr6 (533-679)||(21688754-21688901)
chr6 (533-762)||(15466363-15466592)
chr6 (542-619)||(20005899-20005976)
chr6 (545-637)||(7542962-7543054)
chr6 (542-638)||(28586031-28586127)
chr6 (710-781)||(24475227-24475298)
chr6 (542-635)||(24251518-24251611)
chr6 (542-589)||(21932102-21932149)
chr6 (606-691)||(20002338-20002423)
chr6 (542-638)||(9898959-9899056)
chr6 (581-638)||(24252230-24252287)
chr6 (542-630)||(2586723-2586810)
chr6 (717-781)||(14079314-14079378)
chr6 (525-589)||(14079494-14079558)
chr6 (528-588)||(20145111-20145171)
chr6 (528-588)||(22187668-22187728)
chr6 (710-768)||(24657338-24657396)
chr6 (542-611)||(9385957-9386025)
chr6 (562-638)||(22413050-22413126)
chr6 (545-607)||(20722209-20722269)
chr6 (679-763)||(25781916-25782002)
chr6 (542-629)||(28589440-28589527)
chr6 (545-635)||(17883789-17883878)
chr6 (556-622)||(19244601-19244667)
chr6 (708-760)||(1635131-1635183)
chr6 (717-781)||(14637047-14637110)
chr6 (562-638)||(24657456-24657532)
chr6 (556-691)||(6630640-6630773)
chr6 (545-612)||(17382150-17382217)
chr6 (547-605)||(34478532-34478589)
chr6 (708-765)||(19244743-19244800)
chr6 (542-638)||(21841689-21841785)
chr6 (710-759)||(22412940-22412989)
chr6 (569-638)||(23009396-23009464)
chr6 (569-638)||(23778900-23778968)
[»] scaffold0102 (1 HSPs)
scaffold0102 (556-772)||(35553-35771)
[»] chr5 (53 HSPs)
chr5 (531-764)||(15690769-15691001)
chr5 (542-693)||(25402283-25402434)
chr5 (542-781)||(22755523-22755763)
chr5 (542-772)||(24266824-24267051)
chr5 (542-772)||(24343455-24343682)
chr5 (540-638)||(34487638-34487735)
chr5 (542-693)||(19004174-19004323)
chr5 (542-638)||(25550505-25550601)
chr5 (539-769)||(26120864-26121093)
chr5 (542-638)||(39434465-39434560)
chr5 (533-693)||(18208195-18208354)
chr5 (542-637)||(19086181-19086276)
chr5 (608-775)||(20744532-20744699)
chr5 (542-772)||(36175136-36175366)
chr5 (533-638)||(17171554-17171659)
chr5 (542-638)||(15375883-15375979)
chr5 (542-638)||(20315431-20315526)
chr5 (542-638)||(23388839-23388934)
chr5 (558-638)||(24245545-24245625)
chr5 (533-638)||(15469929-15470034)
chr5 (542-781)||(17431885-17432125)
chr5 (542-638)||(24140445-24140540)
chr5 (533-768)||(19283726-19283961)
chr5 (532-638)||(24852173-24852279)
chr5 (533-769)||(18937741-18937979)
chr5 (542-638)||(17185465-17185561)
chr5 (584-769)||(24260560-24260746)
chr5 (533-623)||(24167600-24167690)
chr5 (557-638)||(17315101-17315182)
chr5 (550-638)||(23265164-23265252)
chr5 (542-638)||(24656854-24656950)
chr5 (542-638)||(34128639-34128734)
chr5 (345-419)||(18018547-18018621)
chr5 (710-764)||(34128807-34128861)
chr5 (525-638)||(19051534-19051646)
chr5 (542-607)||(23380289-23380354)
chr5 (717-770)||(26121191-26121244)
chr5 (562-638)||(20858707-20858783)
chr5 (710-781)||(24245401-24245471)
chr5 (542-604)||(32417391-32417452)
chr5 (577-638)||(20549705-20549766)
chr5 (557-638)||(29263582-29263662)
chr5 (617-781)||(24662034-24662198)
chr5 (562-638)||(28664796-28664872)
chr5 (708-763)||(17314987-17315042)
chr5 (710-760)||(39434626-39434676)
chr5 (727-768)||(16523672-16523713)
chr5 (542-579)||(20419958-20419995)
chr5 (577-638)||(20564081-20564142)
chr5 (533-638)||(26110463-26110567)
chr5 (558-607)||(26502137-26502185)
chr5 (545-610)||(28253286-28253350)
chr5 (710-763)||(28664933-28664986)
[»] chr8 (46 HSPs)
chr8 (525-781)||(24114140-24114396)
chr8 (525-775)||(29382224-29382475)
chr8 (525-781)||(13314850-13315105)
chr8 (550-764)||(34497125-34497341)
chr8 (533-745)||(14528142-14528355)
chr8 (542-781)||(24269600-24269839)
chr8 (542-771)||(25182294-25182525)
chr8 (533-693)||(6884951-6885110)
chr8 (533-693)||(30806438-30806603)
chr8 (545-638)||(2637603-2637696)
chr8 (533-638)||(30122156-30122260)
chr8 (542-637)||(15238801-15238896)
chr8 (542-638)||(5850943-5851039)
chr8 (542-638)||(24904635-24904731)
chr8 (578-781)||(13697893-13698095)
chr8 (542-764)||(24644840-24645066)
chr8 (560-638)||(17509266-17509344)
chr8 (542-771)||(19786733-19786964)
chr8 (539-636)||(17101896-17101993)
chr8 (539-639)||(14075593-14075693)
chr8 (540-781)||(18448398-18448641)
chr8 (533-720)||(28276677-28276863)
chr8 (558-693)||(21314641-21314775)
chr8 (545-608)||(30783772-30783835)
chr8 (546-638)||(44011025-44011116)
chr8 (714-781)||(24110526-24110593)
chr8 (563-638)||(27659468-27659543)
chr8 (533-638)||(17976612-17976717)
chr8 (525-622)||(24110672-24110769)
chr8 (710-775)||(26394562-26394626)
chr8 (562-638)||(23893202-23893278)
chr8 (539-637)||(31288357-31288454)
chr8 (542-610)||(24119798-24119865)
chr8 (542-638)||(25226138-25226234)
chr8 (580-638)||(16403952-16404010)
chr8 (542-588)||(26008025-26008071)
chr8 (679-772)||(30122020-30122114)
chr8 (557-606)||(14006112-14006161)
chr8 (542-638)||(5052923-5053018)
chr8 (679-781)||(7983720-7983822)
chr8 (595-638)||(9641932-9641975)
chr8 (679-762)||(23893089-23893174)
chr8 (557-611)||(28317431-28317484)
chr8 (532-582)||(30235369-30235419)
chr8 (710-763)||(16404072-16404125)
chr8 (558-611)||(26615270-26615323)
[»] chr4 (61 HSPs)
chr4 (533-751)||(17671995-17672214)
chr4 (558-775)||(17336997-17337216)
chr4 (533-666)||(11490525-11490659)
chr4 (524-724)||(12578180-12578381)
chr4 (542-781)||(13908856-13909097)
chr4 (542-781)||(19092297-19092537)
chr4 (539-781)||(7582296-7582540)
chr4 (542-638)||(13692670-13692766)
chr4 (525-636)||(13992879-13992990)
chr4 (545-750)||(17216822-17217031)
chr4 (542-781)||(5679207-5679447)
chr4 (533-764)||(25121100-25121331)
chr4 (542-638)||(20315002-20315098)
chr4 (542-781)||(15164769-15165009)
chr4 (533-638)||(19882633-19882738)
chr4 (542-638)||(19492701-19492797)
chr4 (558-781)||(24639318-24639535)
chr4 (540-679)||(19636546-19636684)
chr4 (542-691)||(13128823-13128971)
chr4 (533-638)||(21323876-21323981)
chr4 (542-781)||(14648897-14649136)
chr4 (525-693)||(40227762-40227928)
chr4 (525-763)||(19562049-19562292)
chr4 (533-693)||(20829685-20829844)
chr4 (542-763)||(17709759-17709978)
chr4 (542-693)||(19929621-19929772)
chr4 (542-659)||(11933421-11933536)
chr4 (542-691)||(22175911-22176059)
chr4 (46-177)||(2792466-2792597)
chr4 (532-622)||(15047120-15047210)
chr4 (532-622)||(15107214-15107304)
chr4 (22-176)||(44358475-44358629)
chr4 (542-639)||(11521191-11521288)
chr4 (542-764)||(26115779-26116000)
chr4 (542-745)||(17951189-17951393)
chr4 (533-637)||(3774818-3774923)
chr4 (533-631)||(9737512-9737615)
chr4 (542-740)||(17955046-17955245)
chr4 (570-638)||(16730400-16730468)
chr4 (542-610)||(19900582-19900649)
chr4 (542-764)||(8969603-8969818)
chr4 (542-624)||(19374828-19374909)
chr4 (545-611)||(22526369-22526435)
chr4 (542-781)||(22357388-22357632)
chr4 (542-638)||(11093966-11094062)
chr4 (542-598)||(11700610-11700666)
chr4 (718-774)||(11935237-11935293)
chr4 (717-781)||(19492568-19492632)
chr4 (542-638)||(23080343-23080439)
chr4 (577-635)||(25094605-25094663)
chr4 (533-638)||(9052667-9052771)
chr4 (717-781)||(13692537-13692601)
chr4 (729-781)||(17106782-17106834)
chr4 (532-607)||(12839812-12839887)
chr4 (708-772)||(23644943-23645008)
chr4 (577-638)||(25097872-25097933)
chr4 (546-611)||(43941815-43941880)
chr4 (732-763)||(4614929-4614960)
chr4 (533-588)||(12318426-12318481)
chr4 (717-763)||(17026218-17026264)
chr4 (708-754)||(19374696-19374742)
[»] scaffold0024 (1 HSPs)
scaffold0024 (533-781)||(39577-39827)
[»] scaffold0622 (1 HSPs)
scaffold0622 (542-781)||(730-969)
[»] scaffold0008 (3 HSPs)
scaffold0008 (533-781)||(54853-55103)
scaffold0008 (545-638)||(48194-48284)
scaffold0008 (561-638)||(234362-234439)
[»] scaffold0005 (1 HSPs)
scaffold0005 (542-781)||(168156-168395)
[»] scaffold0427 (1 HSPs)
scaffold0427 (576-781)||(2675-2881)
[»] scaffold0019 (2 HSPs)
scaffold0019 (542-691)||(181654-181802)
scaffold0019 (542-638)||(11242-11338)
[»] scaffold0650 (1 HSPs)
scaffold0650 (542-638)||(6289-6385)
[»] scaffold0035 (1 HSPs)
scaffold0035 (542-638)||(69915-70011)
[»] scaffold0016 (2 HSPs)
scaffold0016 (542-638)||(3534-3629)
scaffold0016 (542-607)||(12111-12176)
[»] scaffold0838 (1 HSPs)
scaffold0838 (542-638)||(2372-2468)
[»] scaffold0832 (1 HSPs)
scaffold0832 (542-638)||(2403-2499)
[»] scaffold0672 (1 HSPs)
scaffold0672 (533-625)||(1727-1819)
[»] scaffold0043 (1 HSPs)
scaffold0043 (542-638)||(89855-89950)
[»] scaffold0062 (1 HSPs)
scaffold0062 (562-720)||(43145-43304)
[»] scaffold0638 (1 HSPs)
scaffold0638 (539-775)||(684-922)
[»] scaffold0001 (2 HSPs)
scaffold0001 (533-693)||(69075-69232)
scaffold0001 (520-625)||(81467-81571)
[»] scaffold0056 (3 HSPs)
scaffold0056 (542-638)||(21279-21374)
scaffold0056 (710-762)||(21436-21488)
scaffold0056 (679-763)||(25113-25199)
[»] scaffold1869 (1 HSPs)
scaffold1869 (542-641)||(387-486)
[»] scaffold0957 (1 HSPs)
scaffold0957 (525-624)||(3138-3236)
[»] scaffold0671 (2 HSPs)
scaffold0671 (679-763)||(569-655)
scaffold0671 (580-638)||(482-540)
[»] scaffold0653 (1 HSPs)
scaffold0653 (532-638)||(4484-4590)
[»] scaffold0238 (1 HSPs)
scaffold0238 (533-638)||(19104-19208)
[»] scaffold0136 (1 HSPs)
scaffold0136 (533-610)||(15494-15571)
[»] scaffold0054 (2 HSPs)
scaffold0054 (528-588)||(72060-72120)
scaffold0054 (727-781)||(72199-72253)
[»] scaffold0006 (2 HSPs)
scaffold0006 (532-633)||(18750-18852)
scaffold0006 (542-635)||(223033-223127)
[»] scaffold0128 (1 HSPs)
scaffold0128 (566-638)||(592-664)
[»] scaffold0090 (1 HSPs)
scaffold0090 (539-626)||(7425-7512)
[»] scaffold0263 (1 HSPs)
scaffold0263 (679-763)||(15785-15871)
[»] scaffold0042 (1 HSPs)
scaffold0042 (541-638)||(29908-30004)
[»] scaffold0034 (1 HSPs)
scaffold0034 (577-638)||(76455-76516)
[»] scaffold0048 (1 HSPs)
scaffold0048 (542-638)||(78596-78692)
[»] scaffold0386 (1 HSPs)
scaffold0386 (717-763)||(6589-6635)
[»] scaffold0063 (1 HSPs)
scaffold0063 (533-579)||(51116-51162)


Alignment Details
Target: chr1 (Bit Score: 667; Significance: 0; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 667; E-Value: 0
Query Start/End: Original strand, 20 - 781
Target Start/End: Complemental strand, 13345953 - 13345194
Alignment:
Q  20 tattttactataaatgtagtttaaaataagtattagtgcaatttggtagtataagaattaaaataataaattggaaattgtatgtttgttttgtgatata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  13345953 tattttactataaatgtagtttaaaataagtattagtgcaatttggtagtataagaattgaaataataaattggaaattgtatgtttgttttgtgatcta 13345854  T
Q  120 agtgtttgatgaaatgcttcaaagaatgtttaatttatatttttatatcggttgttgtatatatgactataggttgagacttggcaggatgacccaacat 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  13345853 agtgtttgatgaaatgcttcaaagaatgtttaatttatatttttatatcggttgttgtatat--gactataggttgagacttggtaggatgacccaacat 13345756  T
Q  220 agctccatacgcagagcatacaacaacaaatactccacctaaatggggaccgtcgtaggtgggttacagacgatgttgatgcatacacttcataggctgc 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||  |||||| |||||||    
T  13345755 agctccatacgcagagcgtacaacaacaaatactccacctaaacggggaccgccgtaggtgggttacggacgatgttgatgcattgacttcacaggctgc 13345656  T
Q  320 agaaccatagatgacattgggttacatatcattttattagtggtttttattcaatttactggagttcatatgagtacacatgtgttagaagctacaaaaa 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  13345655 agaaccatagatgacattgggttacatatcattttattagtggtttttattcaatttactggagttcatatgattacacatgtgtcagaagctacaaaaa 13345556  T
Q  420 tgacaggaaatgagtatgcgtaggaagtgaaaatcgtaccacaaaagtcttgtagttgcttgaagtcttataggatcattgcacaaaaaccttgtagttg 519  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13345555 tgacaggaaatgagtatgcgaaggaagtgaaaatcgtaacacaaaagtcttgtagttgcttgaagtcttataggatcattgcacaaaaaccttgtagttg 13345456  T
Q  520 gatagtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaa 619  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13345455 gatagtgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaa 13345356  T
Q  620 caattcgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcagttacctgttt 719  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13345355 caattcgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcagtttttatctatttaaaacatagcagttacctgttt 13345256  T
Q  720 tggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  13345255 tggtttaagaaaagtaaacagcggttaggatttttcgaatcccccctatttatattgttgga 13345194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 17359147 - 17359404
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |  ||||||||||| ||||||| ||||    
T  17359147 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataatt 17359246  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc--agttacctg-ttttg 721  Q
    | |||||||||||| ||| ||||||||| |||||||||  ||| ||||| ||| |||||||||||||||  |   ||||||||  | ||||||| |||||    
T  17359247 ctcgttacttatttttaggttgacgatataataaaaga--taagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttg 17359344  T
Q  722 gtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||  | |||||||||  | |||||||||||||||||||||| ||||||||||| |||||    
T  17359345 gttgcataaaagtaagatgcggttaggattcttcgaatcccctctatttatattgttgga 17359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 532 - 772
Target Start/End: Complemental strand, 23038118 - 23037876
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| || |||||    
T  23038118 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgtta 23038020  T
Q  632 cttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaaga 729  Q
    |||||||  ||||||| ||||||||||||||| ||| |||| |  | || |||||||| ||| |||  |||||||| |||||| || ||||||||  |||    
T  23038019 cttattttaagtttgatgataaaataaaagagataatggttgagaaattacaatttttttctgtttgcaacatagcaagttacttgtttttggttgcaga 23037920  T
Q  730 aaagtaagcagtggtt--aggattcttcgaatcccccctatttat 772  Q
    || |||| ||||||||  |||||||||||||||||||||||||||    
T  23037919 aatgtaa-cagtggttagaggattcttcgaatcccccctatttat 23037876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 539 - 734
Target Start/End: Complemental strand, 51473974 - 51473780
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||| |||||||  || |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||    
T  51473974 ggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttt 51473877  T
Q  639 atagtttgacgataaaataaaagagtt-aaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagt 734  Q
     ||| | ||| |||||||||||||||| |||||||| ||||||||||||||||||| |||  |||||| | ||||| || ||||||||  ||||||||    
T  51473876 ttag-tcgacaataaaataaaagagttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaagttatctattttggttgcagaaaagt 51473780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 542 - 775
Target Start/End: Original strand, 12208603 - 12208838
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    |||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||     
T  12208603 aagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttttg 12208702  T
Q  640 tagtttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagta 735  Q
    ||  ||||||||   ||||||||   || ||||  |||| ||| || |||| |||| |||  |||| ||||   ||||||||||| | |  |||||||||    
T  12208703 taagttgacgat---ataaaagataaaagggttagaaaggttt-cagttttaatctgtttgcaacagagcaagtttacctgttttagctgcagaaaagta 12208798  T
Q  736 agcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  12208799 agcagcggttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 542 - 775
Target Start/End: Complemental strand, 17610353 - 17610118
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| |     
T  17610353 aagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttg 17610254  T
Q  641 --agtttgacgataaaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaagt 734  Q
      |||||||||||   |||||  |||||||||||| ||   ||| ||||||||| | |||  |||| ||||   ||||||| ||||||||  ||||||||    
T  17610253 taagtttgacgat---ataaa--agttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagt 17610159  T
Q  735 aagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    |||||| ||||||||||||| ||| ||||||| ||||||||    
T  17610158 aagcagcggttaggattctttgaaacccccctttttatatt 17610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 543 - 775
Target Start/End: Original strand, 9401511 - 9401742
Alignment:
Q  543 agtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--tttat 640  Q
    |||||||||||| |||||||| || |||||||   |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||  ||| |    
T  9401511 agtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgt 9401607  T
Q  641 agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaagc 738  Q
    |  |||  |||| |||||||||  ||| ||||| ||| ||||||||||||||| |||  |||| || |   |||||||||||||||  | |||||||||     
T  9401608 aagttgttgatataataaaaga--taacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctgttttggttacaaaaaagtaagt 9401705  T
Q  739 agtggttaggattcttcgaatcccccctatttatatt 775  Q
    || |||||||||||||||||||||| |||||||||||    
T  9401706 agcggttaggattcttcgaatcccctctatttatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 17837510 - 17837615
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  17837510 ggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttac 17837609  T
Q  633 ttattt 638  Q
    ||||||    
T  17837610 ttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 541 - 781
Target Start/End: Complemental strand, 31236146 - 31235905
Alignment:
Q  541 aaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    |||||||||| ||| |||||| |||| ||||||||||||| ||||||| ||||| |||  ||||||||||||||||||| |||||||||||||||||| |    
T  31236146 aaagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttattttt 31236047  T
Q  641 agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaagtaag 737  Q
    |  ||||||||| ||||||| |  ||| ||||| ||| ||||||||||||||| |||  |||| ||||   |||| || ||||||||  | |||||||||    
T  31236046 aagttgacgatataataaaata--taagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaag 31235949  T
Q  738 cagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  ||||| ||||||| |||| ||| ||||||||||| |||||    
T  31235948 caacggttaagattctttgaattccctctatttatattgttgga 31235905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 545 - 781
Target Start/End: Original strand, 22664211 - 22664449
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||||||  ||||| || ||| ||| |||||| ||||||| ||||||| ||  |    
T  22664211 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgcttattt-taagt 22664309  T
Q  645 tgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagt 741  Q
    |||||  |||||||||||||| ||| |||||   | ||||||||||||| | |||  |||| ||| |||||| ||||||||||  ||||||||||| ||     
T  22664310 tgacgatataaaataaaagagataagggttagtaaattgcaatttttatttgtttgtaacagagcaagttacatgttttggttgcagaaaagtaagtagc 22664409  T
Q  742 ggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||| |||| |||||| || ||||||| || |||||    
T  22664410 ggttaggactctttgaatcctccgtatttattttattgga 22664449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 542 - 773
Target Start/End: Complemental strand, 15544063 - 15543831
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||    |||||||||| |||||||||||||| ||||||||  |||     
T  15544063 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttatttttt 15543964  T
Q  640 tagtttgacgataaaataaaagagttaaaggtt-aaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaagta 735  Q
    || |||||||||   ||||||||  ||| |||| ||||| ||||||||||||| | |||  ||||||| |   ||||||| |||| |||  |||||||||    
T  15543963 taatttgacgat---ataaaaga--taagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagta 15543869  T
Q  736 agcagtggttaggattcttcgaatcccccctatttata 773  Q
    ||||  ||||||||||||||||||||||| | ||||||    
T  15543868 agcaacggttaggattcttcgaatcccccttgtttata 15543831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 545 - 703
Target Start/End: Original strand, 24281282 - 24281440
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||  |    
T  24281282 tgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttacttattt-taagt 24281380  T
Q  645 tgac--gataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaaca 703  Q
    ||||   ||||||||||||||| || ||||| ||| ||||||||| ||||| ||| |||||    
T  24281381 tgacaatataaaataaaagagtaaagggttagaga-ttgcaatttctatctgtttgaaaca 24281440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 560 - 763
Target Start/End: Complemental strand, 21666687 - 21666483
Alignment:
Q  560 accaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--tttatagtttgacgataaaata 657  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||  ||||||||   |||    
T  21666687 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgat---ata 21666591  T
Q  658 aaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaagcagtggttaggattct 753  Q
    |||||  ||| ||||  ||||| | | ||||||||||| |||  || | | ||   |||||||||||||||  ||||||||||||| |||||||||||||    
T  21666590 aaaga--taagggttaaaaagactagtaatttttatctgtttgcaagacaacaagtttacctgttttggttgtagaaaagtaagcaatggttaggattct 21666493  T
Q  754 tcgaatcccc 763  Q
    ||||||||||    
T  21666492 tcgaatcccc 21666483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 3591759 - 3591654
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||| |||| ||||| ||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  3591759 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttac 3591660  T
Q  633 ttattt 638  Q
    ||||||    
T  3591659 ttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 532 - 764
Target Start/End: Complemental strand, 12012907 - 12012687
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||| ||||| ||||| |||||  ||||||||||||||||||||  |||||||||| ||||||||||| || |||| ||||||||||    
T  12012907 tggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgtta 12012808  T
Q  632 cttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaa 730  Q
    ||||| ||            | |||||||||||||| ||||| ||| ||||||||||||| | |||  |||||||| |||||||||||||||||  | ||    
T  12012807 cttatata------------ataataaaagagttaagggttagaga-ttgcaatttttatttgtttgcaacatagcgagttacctgttttggttgcacaa 12012721  T
Q  731 aagtaagcagtggttaggattcttcgaatccccc 764  Q
    |||||| ||  | |||||||||||||||||||||    
T  12012720 aagtaaacaacgattaggattcttcgaatccccc 12012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 525 - 638
Target Start/End: Original strand, 21449074 - 21449187
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||  || ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  21449074 tgatgtgcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatt 21449173  T
Q  625 cgcgttacttattt 638  Q
       |||||||||||    
T  21449174 tatgttacttattt 21449187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 697
Target Start/End: Original strand, 147633 - 147786
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| ||||| ||||  ||||| |||||||||||||| ||||||||||| ||||||||||||| ||| ||| |||||  ||||||||||||||| ||    
T  147633 aagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttattt-ta 147731  T
Q  642 gtttgacgata-aaataaaagagttaaaggttaaagatttgcaatttttatctattt 697  Q
     |||||||||| ||||||||||| ||| ||||| |||||| ||| ||||||||||||    
T  147732 atttgacgatataaataaaagagataagggttagagattt-caa-ttttatctattt 147786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 25405727 - 25405631
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  25405727 aagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 29242521 - 29242617
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |  |||||||||||  ||||||||||||||||||| |||||    
T  29242521 aagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 739
Target Start/End: Original strand, 14779567 - 14779766
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    |||||||||||||  |||||||||| |||| ||||||| |||||||||||||||||| |||||||||||| |||||||||  |||||||| |||  |||     
T  14779567 aagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttttg 14779666  T
Q  640 tagtttgacgataaaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaa 736  Q
    ||  ||||||||   |||||| ||  |||||||| |||  ||||||||||||| | |||| |||||| ||   |||| |||||||||| |||||||||||    
T  14779667 taagttgacgat---ataaaaaagaaaaaggttagaagggttgcaatttttatttgtttacaacatatcaagtttacttgttttggttgaagaaaagtaa 14779763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 533 - 717
Target Start/End: Complemental strand, 15813260 - 15813077
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||| || || |||||||||||||| || |||| |||||||| ||||| |||||  |||||||||| || ||||||    
T  15813260 ggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgttac 15813162  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctgt 717  Q
    |||||| || |||||||||||||| |||||| ||| |||||| || |||||||||||||| | |||  |||||||| ||||||||||    
T  15813161 ttattt-taatttgacgataaaat-aaagagataagggttaagaggtttgcaatttttatatgtttccaacatagcaagttacctgt 15813077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 636
Target Start/End: Original strand, 21847636 - 21847729
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttat 636  Q
    ||||||||||||| ||||||||||| |||||||  ||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  21847636 aagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttacttat 21847729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 550 - 638
Target Start/End: Complemental strand, 16787815 - 16787727
Alignment:
Q  550 caaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||| |||||||||||||    
T  16787815 caaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttattt 16787727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 18736337 - 18736241
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| ||||| |||||||| |||||||||||| || |||||||||  ||||||||||||    
T  18736337 aagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattt 18736241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 544 - 754
Target Start/End: Original strand, 33190681 - 33190892
Alignment:
Q  544 gtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagt 643  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||||||| |||||||||   ||||||||||  || |||||| ||| ||||||||||| ||      
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgttacttattt-taag 33190779  T
Q  644 ttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcag 740  Q
    ||||||  ||||||||||| |||||| | ||| ||| ||| ||||||||| | |||  ||||  || ||||||||| |||| ||  ||||||||||||||    
T  33190780 ttgacgatataaaataaaatagttaaggtttagaga-ttgtaatttttatttgtttgcaacagtgcaagttacctggtttgattgcagaaaagtaagcag 33190878  T
Q  741 tggttaggattctt 754  Q
     |||||||||||||    
T  33190879 cggttaggattctt 33190892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 24306411 - 24306307
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||| |||||   ||||| ||||||||||||    
T  24306411 ggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgttac 24306313  T
Q  633 ttattt 638  Q
    ||||||    
T  24306312 ttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 612 - 772
Target Start/End: Complemental strand, 15808047 - 15807886
Alignment:
Q  612 tgtccaaacaattcgcgttacttatttatagtttgacgata--aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca- 708  Q
    |||| |||||| |||| |||||||||| |||||||| ||||  ||||||||||||||| |||||| |||| ||||||||||| | |||  |||| ||||     
T  15808047 tgtctaaacaactcgcattacttattt-tagtttgaagatataaaataaaagagttaatggttaaggatt-gcaatttttatttgtttgcaacagagcaa 15807950  T
Q  709 gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||||| |||||||||  |||||| ||||||| | ||||||||||| |||||||| ||||||||    
T  15807949 gttaccagttttggttgtagaaaaataagcagcgattaggattctttgaatccccactatttat 15807886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 768
Target Start/End: Original strand, 22622893 - 22623120
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||| | ||| ||||||| |||||||||| |||||||||||||||||  | |||||||| ||| ||||||| ||||||||||||||| || ||    
T  22622893 aagtgtaccaa-tcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttta 22622991  T
Q  642 gtttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaag 737  Q
     |  |  |||   || ||  |||||| ||||  ||||| |||| |||||||| |||||  |||| ||||   |||||||||||||||  |||||||||||    
T  22622992 ttaagttgatggtattaa--agttaacggttaaaaagacttgccatttttatatatttgcaacagagcaagtttacctgttttggttgcagaaaagtaag 22623089  T
Q  738 cagtggttaggattcttcgaatcccccctat 768  Q
    |||  ||||||||||||| ||||||| ||||    
T  22623090 cagctgttaggattcttcaaatcccctctat 22623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 21988079 - 21987983
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||||||| | |||||||||||||||||||||| ||||| |   ||||||| ||| |||||| |||||||||||||||||||    
T  21988079 aagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattt 21987983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 637
Target Start/End: Complemental strand, 27117824 - 27117720
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||| |||||||| ||||||||||| |||||||||||||||||||||  ||| |||||| ||||||||||   |||||||||  |||||||    
T  27117824 ggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgttac 27117725  T
Q  633 ttatt 637  Q
    |||||    
T  27117724 ttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 543 - 638
Target Start/End: Original strand, 16179010 - 16179105
Alignment:
Q  543 agtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||| | |||  ||||||| |||||||||||||  |||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttattt 16179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 772
Target Start/End: Original strand, 28008110 - 28008338
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    |||| ||||| |||||| |||| ||||||| ||||| | |||||| ||| ||   | |||||||| || |  | |||||||| |||||||||||  ||||    
T  28008110 tgtatcaaatcgtttactaagtaataaagttataagaatagtatcgtattcattggaattgtcgtcttctttatacaattcgtgttacttattttaagtt 28008209  T
Q  645 tgacgata--aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcag-ttacctgttttggtttaagaaaagtaagcagt 741  Q
     |||||||  |||||||||||| || | ||| ||||| ||||||||||||| |||  || | ||||  |||| ||||||||||  ||||||||||||||     
T  28008210 -gacgatataaaataaaagagtaaaggattagagatt-gcaatttttatctgtttccaatagagcaaattacttgttttggttgcagaaaagtaagcagc 28008307  T
Q  742 ggttaggattcttcgaatcccccctatttat 772  Q
    ||||||||||||| ||||| |||||||||||    
T  28008308 ggttaggattctttgaatctcccctatttat 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 26649067 - 26648972
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| ||||||||||| ||||| |||||||| || |||  |||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  26649067 aagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatttattt 26648972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 691
Target Start/End: Original strand, 44795386 - 44795519
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtcc-aaacaattcgcgttacttatttatagtttgacgataaaa 655  Q
    |||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||| |||| ||| || |||  |||||||||| ||  |||| |||||||    
T  44795386 tttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaaaaaactcgacttacttattt-tatgttgatgataaaa 44795483  T
Q  656 taaaagagttaaaggttaa-agatttgcaatttttat 691  Q
    ||||| || ||| |||||| |||||||||||||||||    
T  44795484 taaaa-agataagggttaagagatttgcaatttttat 44795519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 650 - 763
Target Start/End: Complemental strand, 18101001 - 18100888
Alignment:
Q  650 ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggttagg 748  Q
    |||||||| ||||||||| ||||| | ||| ||||||||||||| |||  ||||||||| ||||| ||||||||||  |||||||||||||| ||||| |    
T  18101001 ataaaatagaagagttaagggttagaaatt-gcaatttttatctgtttgcaacatagcaagttacatgttttggttgcagaaaagtaagcagcggttatg 18100903  T
Q  749 attcttcgaatcccc 763  Q
    ||| || ||||||||    
T  18100902 attatttgaatcccc 18100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 622
Target Start/End: Complemental strand, 9787985 - 9787896
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    ||||| || |||||||||||||  |||| ||||| |||||||||||||||||||||| |||||| ||  |||||||||| ||| ||||||    
T  9787985 ggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaa 9787896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 644
Target Start/End: Complemental strand, 15813639 - 15813519
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataa-gtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    ||||||| ||||| |  ||||||||||||| ||||| |||   |||||||||||| |||||||||  |||||||| ||||||||||||  |  |||||||    
T  15813639 tgatgtgcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaat 15813540  T
Q  624 tcgcgttacttatttatagtt 644  Q
    ||| ||||||||||| |||||    
T  15813539 tcgtgttacttatttttagtt 15813519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 16069647 - 16069552
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| | |||||||| |||| |||||||||||| ||   ||||||||  |||||||||||    
T  16069647 aagtgtaccaa-ttgttaaccaagtaataaagtgataagtaaaatatcatatacacagggattgtcgtttcgtttgaacaattcttgttacttattt 16069552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 781
Target Start/End: Complemental strand, 21334638 - 21334574
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||| | |||||| |||||    
T  21334638 ttttggttgaagaaaagtaaacagcggttaggattcttcgaatcccccctgtctatattgttgga 21334574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 24267879 - 24267783
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| |||||  |||| ||||| ||||| ||||||||| ||||||||||||| || |||||| |||| ||| || |||||| ||||||||||||    
T  24267879 aagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgttacttattt 24267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 16917016 - 16916934
Alignment:
Q  557 tttaccaagtgataaagtga-taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||| | ||||||||||||| |||||||| |||||||| ||| |||| |||||||| ||||||||||||    
T  16917016 tttatcaagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttattt 16916934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 727 - 781
Target Start/End: Original strand, 21449266 - 21449320
Alignment:
Q  727 agaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||    
T  21449266 agaaaagtaagcagcggttaggattcttcgaatccctcctgtttatattgttgga 21449320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 22620254 - 22620360
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||| |||||| ||||  |||| |||||||||||| ||||||||| |||||| | | |||||| ||| ||| ||| ||||| |||||    
T  22620254 tggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgtta 22620353  T
Q  632 cttattt 638  Q
    |||||||    
T  22620354 cttattt 22620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 638
Target Start/End: Original strand, 24214560 - 24214642
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| ||||||||||||||| ||||   |||||||||||||||| |||| ||| |||||| |  ||||||||||||    
T  24214560 gtttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttattt 24214642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 26540898 - 26540959
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggatt 604  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||| |||||    
T  26540898 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggatt 26540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 763
Target Start/End: Complemental strand, 32383095 - 32382883
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||||||           ||||||||||| |||||||||||| | ||||| |||||       
T  32383095 aagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatc-----------gattgtcgtttcgtccaaacaatttgtgttacctattt--- 32383010  T
Q  642 gtttgacgata----aaataaaagagttaaaggttaaagat-ttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagta 735  Q
     ||| || |||    ||||||||||||| ||||||  |||| ||||||||||||||| |||  |||| ||| | |||||||||||||||  ||||| ||     
T  32383009 ttttaacaataaaataaataaaagagttgaaggtt-gagatattgcaatttttatctgtttgcaacagagcaaattacctgttttggttgcagaaatgtt 32382911  T
Q  736 agcagtggttaggattcttcgaatcccc 763  Q
    |||||  |||||||||||| ||||||||    
T  32382910 agcagccgttaggattctttgaatcccc 32382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 34480974 - 34481067
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||| |||||||||  || |||| |||  ||||||  ||||| |||||||||||    
T  34480974 tgtacaaaatcgtttaccaagtaataaagtgataagtagaatattatatccacaatgactgtcatttcatccaaaacattcgtgttacttattt 34481067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 760
Target Start/End: Complemental strand, 17121430 - 17121378
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatc 760  Q
    |||||| ||||||||||  |||||||||||||| |||||||||||||||||||    
T  17121430 agttacttgttttggttgcagaaaagtaagcagcggttaggattcttcgaatc 17121378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 539 - 610
Target Start/End: Original strand, 25958108 - 25958178
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    ||||||||||  |||| |||||| |||| || ||||| ||| ||||||||||||||||||||||||||||||    
T  25958108 ggaaagtgtattaaatcgtttacaaagtaatgaagtg-taaatagagtatcatatccacatggattgtcgtt 25958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 596
Target Start/End: Complemental strand, 17121576 - 17121523
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatcca 596  Q
    ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  17121576 aagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 652
Target Start/End: Original strand, 18825658 - 18825770
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||| | ||| ||||||| ||||||||||||||| |||||| |||||||| || ||||| ||| || | |||||||  |||||||||  ||||    
T  18825658 aagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaatttta 18825756  T
Q  640 t-agtttgacgata 652  Q
    | ||||||||||||    
T  18825757 taagtttgacgata 18825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 759
Target Start/End: Complemental strand, 16069489 - 16069440
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaat 759  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  16069489 ttacctgttttggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 21334801 - 21334720
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||||||| |||||| |||||  | | |||||| |||  |||||||||||| ||||||||||||    
T  21334801 tttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttattt 21334720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 638
Target Start/End: Original strand, 23179839 - 23179896
Alignment:
Q  581 tagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||| ||||| ||||||    
T  23179839 tagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttattt 23179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 16359873 - 16359968
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| ||||| || |||||| |||||  |||||||||| | ||||||||  ||||| ||| |||||| ||| ||||    
T  16359873 aagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccacatgtactgtcgtttcatccaatcaactcgcgtcactaattt 16359968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 679 - 763
Target Start/End: Complemental strand, 16916907 - 16916820
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagc--agttacctgtttt-ggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||  |||| |||  | ||||||||||| ||||  |||||||||||||| || |||||||||||||||||||    
T  16916907 ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatcccc 16916820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 750
Target Start/End: Complemental strand, 18529119 - 18529079
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggat 750  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  18529119 ttacctgttttggttgtagaaaagtaagcagtggttaggat 18529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 764
Target Start/End: Complemental strand, 15813471 - 15813416
Alignment:
Q  709 gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||||||||||  ||||||||||||||  ||||| |||||| |||||||||    
T  15813471 gttacctgttttggttgcagaaaagtaagcagcagttagtattcttagaatccccc 15813416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 18825782 - 18825868
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||| |||| ||||   |||| ||||||||||  |||||||||||||| | | ||||||||| ||||||||    
T  18825782 ttgcaatttttatctgtttacaacaaagcaaatttacttgttttggttgtagaaaagtaagcagcgataaggattctttgaatcccc 18825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 23179923 - 23180009
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcagtt--acctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||| || ||| || ||  |||| ||||||||  |||||||||||||| ||| |||||| |||||||||||    
T  23179923 ttgcaatttttatctgtttacaaaataacaattttaccttttttggttggagaaaagtaagcagcggtaaggattattcgaatcccc 23180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 562 - 640
Target Start/End: Original strand, 24054001 - 24054078
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    ||||| ||||||| |||||||||||||| |||||||| |||||||| ||| |||  |||||||   |||||||||||||    
T  24054001 caagtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttat 24054078  T

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Target: chr3 (Bit Score: 133; Significance: 1e-68; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 525 - 775
Target Start/End: Complemental strand, 16245843 - 16245593
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| |  ||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  16245843 tgatgtgcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaatt 16245744  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttgg 722  Q
    | |||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||  |||| ||| ||||||||| ||||||    
T  16245743 ctcgttacttattt-tagtttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagttacctgtttttgg 16245645  T
Q  723 tttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    ||  |||||||||||||| |||||| ||||| ||||| |||||||||||||||    
T  16245644 ttgcagaaaagtaagcagcggttagaattctccgaat-ccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 542 - 781
Target Start/End: Complemental strand, 2167713 - 2167475
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||  | |||||||| ||||||||||||| | |||||||||| ||    
T  2167713 aagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttattttta 2167615  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcag 740  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||||||||| |||  |||||| | |||||||||||||||||   |||||||||| ||    
T  2167614 gtttgactataaaataaaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaagttacctgttttggttgtggaaaagtaagaag 2167515  T
Q  741 tggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  2167514 tggttaggattcttcgaat-ccccctatttatattgttgga 2167475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 41508352 - 41508608
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||| ||||| ||||| ||||||||||| ||||| |||| ||||  |  |||||||||||| ||||||||||||    
T  41508352 tgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatt 41508451  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggt 723  Q
     || |||||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||  |||| ||| |||||| |||||||||    
T  41508452 tgcattacttatttttaatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagttacatgttttggt 41508551  T
Q  724 ttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |  |||||||||| ||| ||||| ||||||| |||| |||||| |||||||| |||||    
T  41508552 tgcagaaaagtaaccagcggttaagattctttgaat-ccccctctttatattgttgga 41508608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 533 - 762
Target Start/End: Complemental strand, 12805996 - 12805766
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  12805996 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttac 12805897  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaaga 729  Q
    |||||| ||  | ||||  ||||||||||||| | || ||||| ||| ||||||||||||||| |||  |||| ||  | ||||||| |||||||  |||    
T  12805896 ttattt-taagtcgacgttataaaataaaagattaaagggttagaga-ttgcaatttttatctgtttgcaacagagaaaattacctgatttggttgcaga 12805799  T
Q  730 aaagtaagcagtggttaggattcttcgaatccc 762  Q
    ||||||||||| |||||||||||||||||||||    
T  12805798 aaagtaagcaggggttaggattcttcgaatccc 12805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 539 - 775
Target Start/End: Complemental strand, 17438530 - 17438293
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17438530 ggaaagtgtaccaaatcgtt-accaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttattt 17438432  T
Q  639 at---agtttgacgataaaataaaagagttaaaggtt---aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaa 730  Q
     |   |||||||||||| ||||||     ||||||||   ||||  ||||||||||||||| |||  |||| ||||   |||||||||||||||  ||||    
T  17438431 ttgtaagtttgacgatataataaa-----taaaggtttagaaag-cttgcaatttttatctgtttgcaacagagcaattttacctgttttggttgcagaa 17438338  T
Q  731 aagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    |||||||||  |||||||||||||||||||||| |||||||||||    
T  17438337 aagtaagcaacggttaggattcttcgaatcccctctatttatatt 17438293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 542 - 764
Target Start/End: Complemental strand, 3116515 - 3116292
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||| |||||||||||| ||||||||||||| |||||||||||| ||    
T  3116515 aagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttattt-ta 3116418  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacct-gttttggtttaagaaaagtaagc 738  Q
      ||||||||||||| |||||| ||| |||||| ||||||||||||||||||| |||  |||| ||| || ||||| |||||||||  ||||||||||      
T  3116417 agttgacgataaaat-aaagagataagggttaagagatttgcaatttttatctgtttgcaacagagcaagatacctggttttggttgcagaaaagtaa-t 3116320  T
Q  739 agtggt--taggattcttcgaatccccc 764  Q
    ||||||   |||||||||||||||||||    
T  3116319 agtggtaagaggattcttcgaatccccc 3116292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 525 - 764
Target Start/End: Original strand, 21301903 - 21302145
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  21301903 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaatt 21302002  T
Q  625 cgcgttactta--tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacc-tgttt 719  Q
    || ||||||||  ||| ||  ||||||||| |||||||||  ||  ||||| ||  ||| ||||||||||| |||  |||| ||||   ||||| | |||    
T  21302003 cgagttacttatttttgtaaattgacgatataataaaaga--tatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttt 21302100  T
Q  720 tggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    || ||  |||||| ||| ||| |||||||||||||||||||||||    
T  21302101 tgattgcagaaaaataaacagcggttaggattcttcgaatccccc 21302145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 542 - 772
Target Start/End: Complemental strand, 21303451 - 21303220
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| ||||| ||||||||| | ||||| |||||||||||||||| || |||||  |||||| ||||  |||||||||||  |||||||||||| ||    
T  21303451 aagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattt-ta 21303353  T
Q  642 gtttgac--gataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
      |||||   ||||||||||||||| || ||||| ||| ||||||||||||||| |||  |||| ||| |||||| ||||||||||  ||||||||||||    
T  21303352 agttgactatataaaataaaagagtaaagggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacttgttttggttgcagaaaagtaagc 21303254  T
Q  739 agtggttaggattcttcgaatcccccctatttat 772  Q
    || |||||||||| || |||||||||||||||||    
T  21303253 agcggttaggattatttgaatcccccctatttat 21303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 542 - 763
Target Start/End: Original strand, 21325342 - 21325565
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||   |||||||||| |||||||||||| | ||||||||||| ||    
T  21325342 aagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttattt-ta 21325440  T
Q  642 gtttgacg--ataaaataaaagagtt-aaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaag 737  Q
      || |||  |||||||||||||||| || ||||| ||| |||||||||||||||||||  |||| ||| ||||||||  |||||||  |||||||||||    
T  21325441 agttaacgatataaaataaaagagttgaagggttagaga-ttgcaatttttatctatttgcaacagagcaagttacctaatttggttgcagaaaagtaag 21325539  T
Q  738 cagtggttaggattcttcgaatcccc 763  Q
     || ||||| ||||||||| ||||||    
T  21325540 tagcggttatgattcttcgcatcccc 21325565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 542 - 764
Target Start/End: Original strand, 5508338 - 5508561
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  ||| |||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||||||| ||    
T  5508338 aagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttacttattt-ta 5508435  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaagc 738  Q
       |||||||||||| |||||| ||| |||||| ||||||| ||||||||||| |||  || | ||| |||||| || |||| |||  |||||||||| |    
T  5508436 aggtgacgataaaat-aaagagataagggttaagagatttgaaatttttatctgtttgcaatagagcaagttacatgttttttgttgcagaaaagtaa-c 5508533  T
Q  739 agtggtt--aggattcttcgaatccccc 764  Q
    |||||||  |||||||||||||||||||    
T  5508534 agtggttagaggattcttcgaatccccc 5508561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 544 - 748
Target Start/End: Original strand, 20429714 - 20429920
Alignment:
Q  544 gtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat-ag 642  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||| |||| | | |||||||| |||  |||| |||||||||||||||||||| | ||    
T  20429714 gtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaag 20429813  T
Q  643 tttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaagcag 740  Q
    |||||||||| |||||||||| ||| ||||| |  |||||||||||||| | |||  |||| ||||   ||| || ||||||||  |||||||||| |||    
T  20429814 tttgacgatataataaaagag-taagggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatctattttggttgcagaaaagtaatcag 20429912  T
Q  741 tggttagg 748  Q
    ||||||||    
T  20429913 tggttagg 20429920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 768
Target Start/End: Complemental strand, 21825965 - 21825739
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||| ||| |||||||| ||||||||||||| |||||||||||||| | |||| ||||||||| |||||||||||||||  |     
T  21825965 aagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttatt--tg 21825869  T
Q  642 gtttgac--gataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaag 737  Q
    |||| ||   ||| ||  |||||||| | || ||| ||| ||||||||||||||| |||  |||||||| |||||||| ||||||||  |||||||||||    
T  21825868 gtttaacaaaatataaataaagagttgatggataagaga-ttgcaatttttatctgtttgtaacatagcaagttaccttttttggttgcagaaaagtaag 21825770  T
Q  738 cagtggttaggattcttcgaatcccccctat 768  Q
     |   ||||||| |||| |||||||||||||    
T  21825769 taagagttaggactctttgaatcccccctat 21825739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 22349411 - 22349507
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||| | ||||||||||    
T  22349411 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattt 22349507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 763
Target Start/End: Original strand, 4650248 - 4650450
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaat 656  Q
    |||||||||| |||||||||| |||| |||||| |||||||| |||||||| ||| | ||||||||||||||||||||||   ||  ||||||     ||    
T  4650248 tttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttat---taagttgacg-----at 4650339  T
Q  657 aaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaagcagtggttaggattc 752  Q
    | || |||||| ||||  ||||| ||||||||||||||| |||  |||  ||||   |||||||||||||||  |||||||||||||  |||||||||||    
T  4650340 acaaaagttaagggttaaaaagacttgcaatttttatctgtttgcaacggagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattc 4650439  T
Q  753 ttcgaatcccc 763  Q
    |||||||||||    
T  4650440 ttcgaatcccc 4650450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 19171940 - 19171835
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||| ||| |||||||||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||| |||||||||||| || ||||    
T  19171940 ggattaggcaagtatactaaattgtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattac 19171841  T
Q  633 ttattt 638  Q
    ||||||    
T  19171840 ttattt 19171835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 10917920 - 10918016
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||| |||| ||| ||||| ||||| |||| |||||    
T  10917920 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacctattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 547 - 638
Target Start/End: Complemental strand, 821606 - 821515
Alignment:
Q  547 taccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||  |||||||||  |||||||||||    
T  821606 taccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 739
Target Start/End: Original strand, 10744904 - 10745101
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||| |||||||| ||||||||||| |||||||||||||||||||||| | |||| | |||||||||||| ||| |||||| || | ||| |||||| ||    
T  10744904 aagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaattattt-ta 10745002  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagca 739  Q
         |   || |||||||||||| | ||| | |||||||||||||||||||||||  |||| ||| |||||||||||||||||  ||||| |||||||    
T  10745003 aaacaaaattataataaaagagttgagggtaagagatttgcaatttttatctatttgcaacagagcaagttacctgttttggttgcagaaatgtaagca 10745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 6289908 - 6290001
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||  | ||||||||| ||||||||||    
T  6289908 tgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtgtagacaattcgcattacttattt 6290001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 12759389 - 12759458
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| | ||||||||||    
T  12759389 aagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgttt 12759458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 8557211 - 8557130
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||  |  |||||||| |||||||||||||    
T  8557211 tttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 635
Target Start/End: Original strand, 8770022 - 8770114
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    ||||||||||| | ||| ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||  ||||||||    
T  8770022 aagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttactta 8770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 561 - 638
Target Start/End: Complemental strand, 19925701 - 19925624
Alignment:
Q  561 ccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| |||| |||||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttattt 19925624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 557 - 634
Target Start/End: Original strand, 28728961 - 28729038
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactt 634  Q
    |||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||   ||||||||||||||||||||    
T  28728961 tttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 12411153 - 12411249
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||   ||||||||| |||||||||| ||||||||||| |||||||| |||||||||||| || |||||||||   |||||||||||    
T  12411153 aagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttattt 12411249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 527 - 598
Target Start/End: Complemental strand, 18458536 - 18458465
Alignment:
Q  527 atgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccaca 598  Q
    ||||||||||| |  ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 762
Target Start/End: Original strand, 19908309 - 19908531
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||| | ||||| ||||||||| |||||| |||||||| || | ||||||| ||||||||||||| ||| || ||||| |     
T  19908309 aagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctatttttt 19908408  T
Q  641 ---agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacct-gttttggtttaagaaaagt 734  Q
       |||||||||||   |||||  |||||| |||||||   ||| ||||||||| | |||  |||| ||||   ||||||  ||||||||  ||||||||    
T  19908409 ttcagtttgacgat---ataaa--agttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagt 19908503  T
Q  735 aagcagtggttaggattcttcgaatccc 762  Q
    ||||||  ||||||||||||||||||||    
T  19908504 aagcagcagttaggattcttcgaatccc 19908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 638
Target Start/End: Complemental strand, 7478444 - 7478336
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||  || |||||||||||| |||||||||| | ||||||||||     || |||| ||||||||| ||||||||||| ||||||||||||    
T  7478444 tgatgtgcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat-----gactatcgtatccacattgattgtcgtttggtccaaacaatt 7478350  T
Q  625 cgcgttacttattt 638  Q
    | ||||||||||||    
T  7478349 cacgttacttattt 7478336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 754
Target Start/End: Complemental strand, 18736768 - 18736556
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||| |||| |||| ||| |  ||||||||| ||| |||||| |||||||||||||||  |    
T  18736768 aagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttacttattttaa 18736670  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcag 740  Q
        |   |   |||||||||||||| ||||| ||||||  ||||||||| | |||  |||  | | |||||||||||||||||  |||||| |||||||    
T  18736669 aacagtaaagtgaataaaagagttaagggttagagatttttaatttttatttgtttgcaaccgaacaagttacctgttttggttgcagaaaaataagcag 18736570  T
Q  741 tggttaggattctt 754  Q
     |||||||||||||    
T  18736569 cggttaggattctt 18736556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 611
Target Start/End: Complemental strand, 13908332 - 13908254
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||| ||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||| | ||||| ||||||    
T  13908332 tggattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatccatagggattatcgttt 13908254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 33229168 - 33229314
Alignment:
Q  40 ttaaaataagtattagtgcaatttggtagtataagaattaaaataataaattgg-aaattgtatgtttgttttgtgatataagtgtttgatgaaatgctt 138  Q
    ||||| ||||||||||||| || ||||||| |||||||| |||||| | | ||  ||||  ||||||| ||||||| | || | ||||||| |||| |||    
T  33229168 ttaaattaagtattagtgctatgtggtagtttaagaattgaaataacacaatgacaaatcatatgtttattttgtgctctaggcgtttgataaaatactt 33229267  T
Q  139 caaagaatgtttaatttatatttttatatcggttgttgtatatatga 185  Q
    |||||||||||||||| |||||||| | | ||||||| || ||||||    
T  33229268 caaagaatgtttaattaatatttttctgttggttgttatagatatga 33229314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 759
Target Start/End: Original strand, 932758 - 932963
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata---gtttgacgata 652  Q
    |||||| |||| ||||| |||||| ||||||||| ||||||||  ||||||| ||| ||||||| ||||| | |||||||||| ||   |||||||| ||    
T  932758 gtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagtttgacgtta 932857  T
Q  653 aaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttagg 748  Q
       ||||||  |||||||||  ||||| || |||||||||| | |||  |||| ||||   |||| ||||||||||  |||||||||||||| ||||||     
T  932858 ---taaaag--ttaaaggtttaaaagacttacaatttttatttgtttgcaacagagcaagtttacttgttttggttgcagaaaagtaagcagcggttagt 932952  T
Q  749 attcttcgaat 759  Q
    |||||||||||    
T  932953 attcttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 8889229 - 8889153
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||||||||||||||  |||||||| |||||||| ||| || | |||||||| ||||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattt 8889153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 31286111 - 31286017
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||||||||| |||||||| ||| |||| |||| |||||||| ||||||| |||| ||||||||||||  ||||||||||||    
T  31286111 aagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaatttccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 635
Target Start/End: Original strand, 8765145 - 8765212
Alignment:
Q  568 ataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||  ||||||||  ||||||||    
T  8765145 ataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttactta 8765212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 638
Target Start/End: Original strand, 8319055 - 8319137
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| || |||||||||||||| |||  |||||||| ||||| |||||| || ||||||||||  |||||||||||    
T  8319055 gtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttacttattt 8319137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 8770179 - 8770232
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||||||    
T  8770179 ttacctgttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccc 8770232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 727 - 772
Target Start/End: Complemental strand, 19171777 - 19171732
Alignment:
Q  727 agaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||    
T  19171777 agaaaagtatgcagtggttaggattcttcgaatcacccctatttat 19171732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 781
Target Start/End: Complemental strand, 7495035 - 7494971
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||  |||||||||||||| | |||||||| ||||||||||| ||||||||||| |||||    
T  7495035 ttttggttgtagaaaagtaagcagggattaggattattcgaatcccctctatttatattgttgga 7494971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 772
Target Start/End: Original strand, 8143783 - 8143846
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||||||||||||||||  ||||| |||||||  ||||||||||||| |||||||||||||||||    
T  8143783 agttacctgttttggttgcagaaa-gtaagcaacggttaggattcttggaatcccccctatttat 8143846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 10923150 - 10923238
Alignment:
Q  543 agtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    ||||||||||||  |||||||||| |||||||||||| || |||||| |||||||  ||||||| ||||  || ||||| |||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaacagttcgcgtta 10923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 11518058 - 11518002
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccaca 598  Q
    ||||||||||||| ||| | ||||| ||||||||||||||||| |||||||||||||    
T  11518058 aagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccaca 11518002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 16230019 - 16229943
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||  ||||||||||||| |||||||| |||||||| ||||||||  |||||||  |||||||||||    
T  16230019 caagtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttattt 16229943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 563 - 764
Target Start/End: Original strand, 8445846 - 8446046
Alignment:
Q  563 aagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat-agtttgacgataaaataaaag 661  Q
    |||| |||||||| ||||||||||||  | ||||||||||||||||||| ||||||| |||||||||||| | ||| | |     |  ||||||||||||    
T  8445846 aagtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttcgtccaaa-aattcgcgttacatgtttttgaacaaaaaaataaaataaaag 8445943  T
Q  662 agttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatc 760  Q
    ||||   ||||| ||| ||||||||||||||  |||  |||| | | ||||||||   ||||||  ||||| |||||||||||||||||||||| |||||    
T  8445944 agtttggggttagaga-ttgcaatttttatcagtttgcaacagaacaagttacctccattggttgcagaaatgtaagcagtggttaggattctttgaatc 8446042  T
Q  761 cccc 764  Q
    ||||    
T  8446043 cccc 8446046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 716 - 763
Target Start/End: Complemental strand, 12754844 - 12754797
Alignment:
Q  716 gttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||    
T  12754844 gttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 12754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 40168324 - 40168197
Alignment:
Q  22 ttttactataaatgtagtttaaaataagtattagtgcaatttggtagtataagaattaaaataataaattggaaattgtatgtttgttttgtgatataag 121  Q
    ||||| ||| ||||||||||||  ||||||| ||| |||| || |||| |||||||| ||| |||  | | |||||||||||||| || |||| | |||     
T  40168324 ttttaatatgaatgtagtttaagttaagtatgagtacaatatgatagtttaagaattgaaacaatgcagtagaaattgtatgtttattctgtgctctaaa 40168225  T
Q  122 tgtttgatgaaatgcttcaaagaatgtt 149  Q
    |||  ||||||||||||| |||||||||    
T  40168224 tgtgcgatgaaatgcttcgaagaatgtt 40168197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 19706892 - 19706831
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggatt 604  Q
    ||||||| ||||||||||||||| | |||||| | |||||| |||||||||||||||||||||    
T  19706892 aagtgtatcaaattgtttaccaaataataaagag-taagtaaagtatcatatccacatggatt 19706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 7900379 - 7900492
Alignment:
Q  22 ttttactataaatgtagtttaaaataagtattagtgcaatttggtagtataagaattaaaataataaattggaaattgtatgtttgttttgtgatataag 121  Q
    ||||||||| ||| ||||||||| || |||||| |||||| ||||| | |||||||| |||||| |   || ||||| ||| ||| ||||| |||||| |    
T  7900379 ttttactatgaatatagtttaaatta-gtattactgcaatgtggtaatttaagaattgaaataacac--tgaaaattatatatttattttgggatatagg 7900475  T
Q  122 tgtttgatgaaatgctt 138  Q
    |||||||||||||||||    
T  7900476 tgtttgatgaaatgctt 7900492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 8765277 - 8765330
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||  ||||||||||||||  |||| ||||||||||||||||    
T  8765277 ttacctgttttggttgcagaaaagtaagcagcagttaagattcttcgaatcccc 8765330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 8143617 - 8143711
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| |||||| |||  |||||||| ||||||||||||  ||||||| | |||| ||||||  ||||||||| |||| ||||||||||    
T  8143617 aagtgtaccaaatcgtttactaagcaataaagtg-taagtagagtattgtatccacgt-gattctcgtttcatccaaacaactcgctttacttattt 8143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 683 - 763
Target Start/End: Original strand, 8170013 - 8170096
Alignment:
Q  683 aatttttatctatttaaaacatagc--agttacctgtttt-ggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||| |||  ||||||||  | ||||||||||| ||||  ||||||||| |||| ||||||||||||||||||||||    
T  8170013 aatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccc 8170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 781
Target Start/End: Original strand, 8319216 - 8319288
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaat-cccccctatttatattcttgga 781  Q
    |||||| ||||||||  | ||||||||||||||||||||| |||| |||| ||||||||||||| || |||||    
T  8319216 ttacctattttggttgcataaaagtaagcagtggttaggactctttgaatccccccctatttattttgttgga 8319288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 21019688 - 21019625
Alignment:
Q  546 gtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    |||||||||  | |||||||| ||||||| |||||||||||||| |||||||| |||||||||||    
T  21019688 gtaccaaatcatctaccaagtaataaagt-ataagtagagtatcttatccacaaggattgtcgtt 21019625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 27543011 - 27542948
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgt 606  Q
    ||||||| ||||| ||||||||||  ||||||| |||||||||||||| |||||||||| |||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccacatgaattgt 27542948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 53300141 - 53300061
Alignment:
Q  97 ttgtatgtttgttttgtgatataagtgtttgatgaaatgcttcaaagaatgtttaatttatatttttatatcggttgttgt 177  Q
    |||||||||| |||| || | || ||||||||||||||| |||||| ||| |||| || |||||||| ||| |||||||||    
T  53300141 ttgtatgtttattttatgctttaggtgtttgatgaaatgtttcaaataatatttagttcatatttttctattggttgttgt 53300061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 638
Target Start/End: Complemental strand, 7495151 - 7495096
Alignment:
Q  583 gagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||  |||||||||||| ||||||| ||||||||||||  ||||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattt 7495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 781
Target Start/End: Original strand, 12411351 - 12411390
Alignment:
Q  742 ggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  12411351 ggttaggattcttcgaatcccccctgtttatattgttgga 12411390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 545 - 611
Target Start/End: Original strand, 7147993 - 7148058
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||||||| |||||||||||  ||||   |||||||||||||| | |||||||||||||||||||    
T  7147993 tgtaccaaatcgtttaccaagtactaaaaa-ataagtagagtatcgtctccacatggattgtcgttt 7148058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 727 - 781
Target Start/End: Complemental strand, 7478265 - 7478211
Alignment:
Q  727 agaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||| |||||||| | |||||||| ||||||||||| ||||||||||| |||||    
T  7478265 agaaatgtaagcagggattaggattattcgaatcccctctatttatattgttgga 7478211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 755
Target Start/End: Complemental strand, 19925550 - 19925504
Alignment:
Q  710 ttacctgttttggttta-agaaaagtaagcagtggttaggattcttc 755  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||    
T  19925550 ttacctgttttggtttgcagaaaagtaagcagcggttaggattcttc 19925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 760
Target Start/End: Complemental strand, 16229915 - 16229831
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagc--agttacctgtttt-ggtttaagaaaagtaagcagtggttaggattcttcgaatc 760  Q
    ||||||||||||||| |||  |||| |||  | ||||||||||| ||||  | |||||||||||| |||||||||||||||||||    
T  16229915 ttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 638
Target Start/End: Original strand, 19167452 - 19167509
Alignment:
Q  581 tagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| |||||||||||||| || ||| |||| ||||||||  |||||||||||    
T  19167452 tagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttattt 19167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 91)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 541 - 781
Target Start/End: Original strand, 16365706 - 16365948
Alignment:
Q  541 aaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    |||||||||||||| ||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  16365706 aaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattttt 16365805  T
Q  641 agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaagc 738  Q
    |  ||||||||| |||||||||||||| | ||| |||||| ||||||| ||||||||  | |  ||| |||||| || ||||||||  | ||||||||||    
T  16365806 aagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaaaaaagtaagc 16365905  T
Q  739 agtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    || ||||||||||||||||||| |||||||||||||| |||||    
T  16365906 agcggttaggattcttcgaatctcccctatttatattgttgga 16365948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 542 - 772
Target Start/End: Original strand, 3734598 - 3734829
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| ||    
T  3734598 aagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttattt-ta 3734696  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
      ||||||  |||||||||||||||||| ||||||||| |||||| |||||||| |||  |||| ||| |||||||||||||||||  ||||||||||||    
T  3734697 agttgacgatataaaataaaagagttaagggttaaaga-ttgcaaattttatctgtttgcaacagagcaagttacctgttttggttgcagaaaagtaagc 3734795  T
Q  739 agtggttaggattcttcgaatcccccctatttat 772  Q
    | ||||||||| |||| ||||| |||||||||||    
T  3734796 aatggttaggactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 525 - 780
Target Start/End: Complemental strand, 9731741 - 9731485
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||| |||||  ||||  ||||||||||||||||||||| || ||||| |||||||||||| ||||||||||||    
T  9731741 tgatgtgcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaatt 9731642  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttgg 722  Q
    |||||||||||||| |||||||| ||||||||||||||||||    ||| ||||||||||||||||||||| |  |||||||| ||||||||| ||||||    
T  9731641 cgcgttacttatttttagtttgatgataaaataaaagagttacgaattagagatttgcaatttttatctatgtgtaacatagcaagttacctgtttttgg 9731542  T
Q  723 tttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgg 780  Q
    ||  | |||||||||||| ||||||| ||  |||||| ||| ||||||||||| ||||    
T  9731541 ttgcataaaagtaagcagcggttagggttgatcgaat-cccactatttatattgttgg 9731485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 4785822 - 4786083
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| || || || ||||||| ||||| ||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||| || ||    
T  4785822 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcactt 4785920  T
Q  625 cgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaa---tttttatctatttaaaacatagc-agttacctg-t 717  Q
    | |||||||||||| ||| ||||||  |||||||||||||||||| ||||| ||||||  ||   |||||||||||||  || | ||| ||||||||| |    
T  4785921 cacgttacttatttttag-ttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaatagagcaagttacctgtt 4786019  T
Q  718 tttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  4786020 tttggttgcagaaaagtaagcagcggttaggattcttcgaatccctcctatttatattgttgga 4786083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 525 - 739
Target Start/End: Complemental strand, 2350861 - 2350645
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || |||||||||||||  |||||||||| ||||| || |||||||| |||| ||||||||||||||||||||||||||||| |||     
T  2350861 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatc 2350762  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaa-ggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttgg 722  Q
    |||||||  ||||| |||||||| |||||||||||| ||||||| ||||| |||||| |||||||||||| |||| |||| | | | |||||||||||||    
T  2350761 cgcgttaaatatttttagtttgaagataaaataaaatagttaaagggttagagattttcaatttttatctgtttacaacacatcaaattacctgttttgg 2350662  T
Q  723 tttaagaaaagtaagca 739  Q
    ||  | |||||||||||    
T  2350661 ttgcaaaaaagtaagca 2350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 5108551 - 5108807
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||||||||| || |||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  5108551 tgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 5108649  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttg 721  Q
    ||    |||||||| ||  ||||||||| |||||||||||  | ||||| ||| || |||||||||||| |||  || | ||||   |||| || |||||    
T  5108650 cg-aacacttatttttaagttgacgatataataaaagagtatatggttagagagttacaatttttatctgtttgcaagagagcaagtttacttgattttg 5108748  T
Q  722 gtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||  |||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  5108749 gttgcagaaaagtaagcagcggttaggattctttgaat-ccccctatttatattgttgga 5108807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 543 - 775
Target Start/End: Complemental strand, 7492358 - 7492130
Alignment:
Q  543 agtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatag 642  Q
    ||||||||||||||||  ||| || ||||| |||||||||||||||| |||||||| ||||||| |||| || ||||||||| || |||||||||| ||     
T  7492358 agtgtaccaaattgttatcca-gtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttat 7492260  T
Q  643 tttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaagcag 740  Q
    ||||| |||| |||||||||||||| ||||| |||||||||||||||| || |||  |||| ||| ||||||||| ||||||||  ||||||||||| ||    
T  7492259 tttgatgatataataaaagagttaagggttagagatttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaagtaagaag 7492160  T
Q  741 tggttaggattcttcgaatcccccctatttatatt 775  Q
        ||||||||||| ||| |||||||||||||||    
T  7492159 ----taggattcttccaat-ccccctatttatatt 7492130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 524 - 752
Target Start/End: Complemental strand, 3329773 - 3329542
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    |||||||| ||||| || ||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  3329773 gtgatgtgcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaat 3329674  T
Q  624 tcgcgttacttatttat---agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-t 717  Q
      ||||||||||||| |   ||||| ||| || ||| |||||  ||| ||||| ||| ||||||||||||||| |||  |||||||||   |||| || |    
T  3329673 ctgcgttacttatttttgtaagtttaacg-tataatgaaaga--taagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtt 3329577  T
Q  718 tttggtttaagaaaagtaagcagtggttaggattc 752  Q
    |||||||  |||||||||||||| |||||||||||    
T  3329576 tttggttgcagaaaagtaagcagcggttaggattc 3329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 4818822 - 4819084
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| || || || ||||||| ||||| ||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||| || ||    
T  4818822 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcactt 4818920  T
Q  625 cgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaa---tttttatctatttaaaacatagc-agttacct-gt 717  Q
    | |||||||||||| ||| ||||||  |||||||||||||||||| ||||| ||||||  ||   |||||||||| ||  || | ||| ||||||||  |    
T  4818921 cacgttacttatttttag-ttgacgatataaaataaaagagttaagggttagagatttttaattttttttatcta-ttgcaatagagcaagttacctatt 4819018  T
Q  718 tttggtttaagaaaagtaagca--gtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||  |||||||||||||  | ||||||||||||||||||||| |||||||||||| |||||    
T  4819019 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 4819084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 9864432 - 9864327
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||    
T  9864432 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttac 9864333  T
Q  633 ttattt 638  Q
    ||||||    
T  9864332 ttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 541 - 765
Target Start/End: Complemental strand, 17153252 - 17153026
Alignment:
Q  541 aaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    |||||||| ||||| ||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||| ||| |||||  ||||||||||||||| |    
T  17153252 aaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattt-t 17153154  T
Q  641 agtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaa 736  Q
    |  ||||||  |||||||||||||| ||| ||||| ||| |||  |||||||||| |||  |||| ||| ||||||||| ||||||||  ||||||||||    
T  17153153 aagttgacgacataaaataaaagagataagggttagaga-ttgttatttttatctgtttgcaacaaagcaagttacctgtttttggttgcagaaaagtaa 17153055  T
Q  737 gcagtggttaggattcttcgaatcccccc 765  Q
    |||| ||||| || |||| ||||||||||    
T  17153054 gcagcggttatgactctttgaatcccccc 17153026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 539 - 638
Target Start/End: Complemental strand, 8979106 - 8979007
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  8979106 ggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattt 8979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 532 - 763
Target Start/End: Complemental strand, 10587131 - 10586898
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||| ||| |||||| ||  ||||    
T  10587131 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgtta 10587032  T
Q  632 cttatttatagttt-gacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttt-tggtttaag 728  Q
    |||||||  |||||  |  |||||||||||||  ||| ||||||||| ||||||||||||||| |||  |||| ||| || ||| ||||| |||||  |     
T  10587031 cttattttaagtttacaatataaaataaaagaaataagggttaaaga-ttgcaatttttatctgtttgcaacagagcaagatacatgtttctggttgcaa 10586933  T
Q  729 aaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||||| || |||| ||||||||    
T  10586932 aaaagtaagcagtggttaagactctttgaatcccc 10586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 542 - 781
Target Start/End: Complemental strand, 1848322 - 1848085
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||||||  ||||||| ||||||||||||||| |||||| |||||||  |||||||| ||| |||||||||||| ||||||||||||| |     
T  1848322 aagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttg 1848225  T
Q  641 --agtttgacgataaaataaaagagttaaaggttaaaga-tttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagta 735  Q
      |||||||||||| || ||     |||| ||||| |||  ||||||||||||||| ||| ||||| ||||   |||||||||||||||  |||||||||    
T  1848224 taagtttgacgatataaaaa-----ttaagggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctgttttggttgcagaaaagta 1848130  T
Q  736 agcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||| ||||| |||||||||||| | |||||| |||||| |||||    
T  1848129 agcagcggttatgattcttcgaat-ctccctatatatattgttgga 1848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 2563803 - 2564060
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| |||||  | ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  2563803 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 2563901  T
Q  625 cgcgttacttatt--tatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgtttt 720  Q
     | ||||||||||  | ||  || |||||| |||||||||  ||| ||||| ||| ||| ||||||||||| |||  |||| ||||   ||||||| |||    
T  2563902 tgtgttacttatttctgtaagttcacgatataataaaaga--taagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgcttt 2563999  T
Q  721 ggttt-aagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
     ||||  ||||||||||| || ||||||||| |||||||| |||||| |||||||| |||||    
T  2564000 agtttgcagaaaagtaagtagcggttaggatccttcgaat-ccccctgtttatattattgga 2564060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 13759957 - 13759861
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattt 13759861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 533 - 693
Target Start/End: Original strand, 7318266 - 7318426
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||| || ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||  |||| ||||    
T  7318266 ggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattac 7318365  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    |||||| ||  ||||||  |||||||||||||| ||| ||||| ||| |||||||||||||||    
T  7318366 ttattt-taagttgacgatataaaataaaagagataagggttagaga-ttgcaatttttatct 7318426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 542 - 772
Target Start/End: Original strand, 19153300 - 19153530
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  |||||||||| |||||||||||| | |||||||| |||| ||||| ||||||||||||||||| || ||||||||||||||| ||    
T  19153300 aagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttacttattt-ta 19153396  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaagc 738  Q
       |||||||||||| |||||| ||| ||||||  |||||||||||||||||| |||  |||||| | ||||||||| ||||||||  |||||||||| |    
T  19153397 aggtgacgataaaat-aaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaagtaa-c 19153494  T
Q  739 agtggtt--aggattcttcgaatcccccctatttat 772  Q
    |  ||||  ||||||||||||||||||| |||||||    
T  19153495 atcggttagaggattcttcgaatcccccatatttat 19153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 542 - 772
Target Start/End: Original strand, 20752699 - 20752929
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  |||||||||| |||||||||||| | |||||||| |||| ||||| ||||||||||||||||| || ||||||||||||||| ||    
T  20752699 aagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttacttattt-ta 20752795  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaagc 738  Q
       |||||||||||| |||||| ||| ||||||  |||||||||||||||||| |||  |||||| | ||||||||| ||||||||  |||||||||| |    
T  20752796 aggtgacgataaaat-aaagagataagggttaagggatttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaagtaa-c 20752893  T
Q  739 agtggtt--aggattcttcgaatcccccctatttat 772  Q
    |  ||||  ||||||||||||||||||| |||||||    
T  20752894 atcggttagaggattcttcgaatcccccatatttat 20752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 542 - 752
Target Start/End: Complemental strand, 11221261 - 11221051
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| |||||| |||| ||||| |||||||||||||||  |||||||| |||||||||||| ||  |||||||| |||||||||||||       
T  11221261 aagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattt--- 11221165  T
Q  642 gtttgacgataaaataaa---agagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaagaaaagtaag 737  Q
     ||| |||||||||||||   |||||| | ||||||| | ||||||||||||| | |||  |||| ||  |||||| ||||||| ||| ||||| || ||    
T  11221164 -tttaacgataaaataaaaagagagttgagggttaaaaaattgcaatttttatttgtttgcaacagagaaagttacttgttttgattttagaaatgttag 11221066  T
Q  738 cagtggttaggattc 752  Q
    |||||||||||||||    
T  11221065 cagtggttaggattc 11221051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 542 - 758
Target Start/End: Original strand, 31492932 - 31493145
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| ||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||  |    
T  31492932 aagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttattttga 31493031  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaagaaaagtaagcag 740  Q
         |  || ||||||||||||| | ||||| ||   |||||||||||||| |||  |||| || ||||||| ||||||||||  ||||| |||||||     
T  31493032 acaataaaat-aaataaaagagttgagggttagag---tgcaatttttatctgtttgcaacagagtcagttacttgttttggttgtagaaatgtaagcaa 31493127  T
Q  741 tggttaggattcttcgaa 758  Q
     |||||||||||||||||    
T  31493128 cggttaggattcttcgaa 31493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 542 - 774
Target Start/End: Complemental strand, 8054155 - 8053926
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||   |||||||||||| | |||||||  |||     
T  8054155 aagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttatttttg 8054059  T
Q  640 tagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaag 737  Q
    ||  ||||||||   |||||||| | | || | ||||| ||| || ||||||||||||  || ||||||   |||||||||||||||  |||||||||||    
T  8054058 taagttgacgat---ataaaaga-taagagttaaaagacttgtaaattttatctatttgcaatatagcaagtttacctgttttggttgcagaaaagtaag 8053963  T
Q  738 cagtggttaggattcttcgaatcccccctatttatat 774  Q
    |||  |||||||||||| |||||||| || |||||||    
T  8053962 cagcagttaggattctttgaatcccctctgtttatat 8053926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 542 - 670
Target Start/End: Complemental strand, 23100049 - 23099922
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||  |||||| | ||    
T  23100049 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcccgacacttatgttta 23099950  T
Q  642 gtttgacgataaaataaaagagttaaagg 670  Q
    | ||||   ||||||||||||||||||||    
T  23099949 g-ttgaaagtaaaataaaagagttaaagg 23099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 525 - 690
Target Start/End: Original strand, 12181593 - 12181759
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtcc-aaacaat 623  Q
    |||| |||| ||| || |||| |||||||| |||||  |||| ||||||||| |||||||||| | |||||||||| |||||||||| |||| |||||||    
T  12181593 tgatatgtgaattaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaat 12181692  T
Q  624 tcgcgttacttatttatagtttgacgataaaataaaagagtt-aaaggttaaagatttgcaattttta 690  Q
    ||| ||||||||||| ||  ||||||||||| |||||||||| || ||||| ||||||||||||||||    
T  12181693 tcgagttacttattt-taagttgacgataaattaaaagagttgaagggttagagatttgcaattttta 12181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 542 - 764
Target Start/End: Original strand, 18662443 - 18662665
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| ||||| ||||||||||   ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||||||       
T  18662443 aagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt--- 18662539  T
Q  642 gtttgacgata---aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaag 737  Q
    | |  || | |   |||||||||| || |  |||| | | ||||||||||||| | |||  |||| ||| |||||||||||||||||  ||||| |||||    
T  18662540 ggtgaacaaaatataaataaaagatttgagagttagata-ttgcaatttttatttgtttgcaacagagcaagttacctgttttggttgcagaaatgtaag 18662638  T
Q  738 cagtggttaggattcttcgaatccccc 764  Q
    ||| |||||||| ||||||||||||||    
T  18662639 cagcggttaggactcttcgaatccccc 18662665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 546 - 762
Target Start/End: Original strand, 20582265 - 20582479
Alignment:
Q  546 gtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--tttatagt 643  Q
    ||||||||| ||||||||| | ||||||||||||||   ||||| |||||||| |||| |||||||  |||| ||||||| |||||||||  ||||||      
T  20582265 gtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaattttataag 20582361  T
Q  644 ttgacgataaaataaaagagttaaaggttaaa--gatttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagca 739  Q
    |||||||||   ||||||   ||| |||||||  ||||||||||||||||||||||  |||| ||||   |||||||||||||||  |||||||||||||    
T  20582362 ttgacgata---taaaagg--taagggttaaaaagatttgcaatttttatctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagca 20582456  T
Q  740 gtggttaggattcttcgaatccc 762  Q
    |  ||||||||||||||||||||    
T  20582457 gcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 551 - 781
Target Start/End: Complemental strand, 39273263 - 39273032
Alignment:
Q  551 aaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat---agtttga 647  Q
    ||||||||||| |||| |||||||||||||||||||||| ||| || |||||||||||||| ||||||| |||| | ||||||||||| |   |||||||    
T  39273263 aaattgtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttga 39273164  T
Q  648 cgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacct-gttttggtttaagaaaagtaagcagtggt 744  Q
    ||||   |||||  |||||| ||||| | | |||||| ||| ||||||||  |||| ||||   ||||||  ||||||||  |||||||||||||| |||    
T  39273163 cgat---ataaa--agttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggt 39273069  T
Q  745 taggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||| ||||||||| || || |||||||| |||||    
T  39273068 taggatccttcgaatctcctctgtttatattgttgga 39273032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 557 - 781
Target Start/End: Complemental strand, 8313477 - 8313250
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaaca---attcgcgttacttatttatagtttgacg-ata 652  Q
    |||||||||| ||||||||||||||||| |||| |||||||| |||||||||||| ||| |||||   | | | |||||||||||  ||||  | | |||    
T  8313477 tttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaagttgaaggtata 8313378  T
Q  653 aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggatt 751  Q
    ||||||||||||||| ||||| ||| ||||||||||||||| |||  |||| ||| |||||||| ||||||||  |||||||||||||    |||||| |    
T  8313377 aaataaaagagttaagggttagaga-ttgcaatttttatctgttttcaacagagcaagttacctattttggttgcagaaaagtaagcaacatttaggact 8313279  T
Q  752 cttcgaatcccccctatttatattcttgga 781  Q
    ||| |||| |||||||||||| || |||||    
T  8313278 cttggaat-ccccctatttattttgttgga 8313250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 9574409 - 9574648
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||| |||| ||||||||||  |||||||||||||||||||||| |||| |||  |||||| |||| ||| |||| | |||||||| |||||| ||    
T  9574409 aagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttatttattt-ta 9574507  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
      ||||||  |||||||||||||||||| ||||| | | ||| ||||||||||| |||  || | ||| ||| ||||| |||| || ||||||||||| |    
T  9574508 agttgacgatataaaataaaagagttaagggttaga-aattgtaatttttatctgtttgcaatagagcaagtaacctggtttgtttgaagaaaagtaaac 9574606  T
Q  739 agtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  |||||||||||| |||| |||||||||||| || |||||    
T  9574607 agcagttaggattctttgaat-ccccctatttattttgttgga 9574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 693
Target Start/End: Original strand, 4986557 - 4986708
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||| | ||||||||||  || |||||||||||||||||| ||| ||| |  ||||||||||||||| ||    
T  4986557 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt-ta 4986655  T
Q  642 gtttgacgat--aaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
      ||||||||  |||||||||| ||||| ||||| ||| |||||||||||||||    
T  4986656 agttgacgataaaaaataaaagtgttaagggttagaga-ttgcaatttttatct 4986708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 693
Target Start/End: Original strand, 4990655 - 4990806
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||| | ||||||||||  || |||||||||||||||||| ||| ||| |  ||||||||||||||| ||    
T  4990655 aagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattt-ta 4990753  T
Q  642 gtttgacgat--aaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
      ||||||||  |||||||||| ||||| ||||| ||| |||||||||||||||    
T  4990754 agttgacgataaaaaataaaagtgttaagggttagaga-ttgcaatttttatct 4990806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 8054586 - 8054490
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||| ||| |||| | |||||||||| |||||||||||||  |||||||||||    
T  8054586 aagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 18369077 - 18368981
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||  |||||| | |||||||||||| |||||||||||||  |||||||||||    
T  18369077 aagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattt 18368981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 11803103 - 11803178
Alignment:
Q  563 aagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| |||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattt 11803178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 545 - 660
Target Start/End: Original strand, 12329687 - 12329802
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    |||||||||| ||||||||||| | ||| |||||| ||||||||  |||||||| |||||||||||||| ||||| ||| |||||||||||||| ||  |    
T  12329687 tgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgttacttatttttaagt 12329786  T
Q  645 tgacgataaaataaaa 660  Q
    |||||||| |||||||    
T  12329787 tgacgatataataaaa 12329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 525 - 662
Target Start/End: Original strand, 6042446 - 6042582
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| |  ||||||| ||||| |||||||| || ||||| || ||||||||||||| ||||||||  | ||||||||| || |||||||||    
T  6042446 tgatgtgcggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatt 6042544  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaaga 662  Q
     ||||||||||||| |||||||||| || |||||||||    
T  6042545 tgcgttacttatttttagtttgacggtataataaaaga 6042582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 525 - 638
Target Start/End: Complemental strand, 10584600 - 10584487
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    |||||| |||||| |  ||||||||||||| ||||| ||||| ||||||||||||| | |||||| |||||||||||||||||||||  |  ||||||||    
T  10584600 tgatgtttggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaatt 10584501  T
Q  625 cgcgttacttattt 638  Q
    || |||||||||||    
T  10584500 cgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 521 - 613
Target Start/End: Original strand, 7397177 - 7397268
Alignment:
Q  521 atagtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttg 613  Q
    |||||||||  |||||| |||||||||||||||  ||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  7397177 atagtgatggttggattaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttttg 7397268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 10937604 - 10937700
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    |||||||||| | ||||||||||    
T  10937604 aagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttcaatcaaacaattcacattacttattt 10937700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 16297917 - 16297821
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||||||||| |||| |||||||||||| |||| ||| ||||||||||||| ||| ||||||||||||| | ||||||||||    
T  16297917 aagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattcacattacttattt 16297821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 660
Target Start/End: Original strand, 1584561 - 1584662
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaat 656  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||| |||| ||| |||||| ||||||||||||||| ||  |||||||||||||    
T  1584561 tttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttacttattt-taagttgacgataaaat 1584658  T
Q  657 aaaa 660  Q
    ||||    
T  1584659 aaaa 1584662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 544 - 638
Target Start/End: Original strand, 5530025 - 5530119
Alignment:
Q  544 gtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||||||| ||||| ||||||||| || ||| ||||||||  |||| |||||| |||||||||||| | |||||||||||    
T  5530025 gtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 542 - 673
Target Start/End: Original strand, 6013595 - 6013727
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  |||| |||||  | ||||||||||||||||||| |||||||| ||||| || |||| ||||||||||| || |||||||||| ||    
T  6013595 aagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttacttattt-ta 6013693  T
Q  642 gtttgacg--ataaaataaaagagttaaaggtta 673  Q
    |||||| |  ||||||||||||||| || |||||    
T  6013694 gtttgatgatataaaataaaagagtaaagggtta 6013727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 6005830 - 6005934
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||| |||||||||||||||||| | ||||| || |||  |||||||  ||||||||||||||||||||| ||||||||||||| ||||||    
T  6005830 ggattaggtaagtttaccaaattgtttaccaattaataaattg-taaccagagtattgtatccacatggattgtcgtttggtccaaacaattcacgttac 6005928  T
Q  633 ttattt 638  Q
    ||||||    
T  6005929 ttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 10648571 - 10648676
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| ||||||  || ||||| ||||||||||| |||||||||||| ||||||||||||| | || ||||||||||||  || |||||||||| |||||    
T  10648571 ggattaggaaagcatatcaaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttac 10648670  T
Q  633 ttattt 638  Q
    ||||||    
T  10648671 ttattt 10648676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 4579100 - 4579195
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| |||||| |||||| |||| |||| ||||||||||||||||| |||||| |  ||||||| |||||||||||||||||| |||||||||||    
T  4579100 aagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 18449244 - 18449340
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||||||||||||||| ||||||||| ||||| | |||| |||||| | ||||||||||||   |||||||||| |||||||||||||    
T  18449244 aagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 15869587 - 15869693
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||| ||||| ||||||||||| |||||||||||||||||||||| ||||| || ||||| | |||||||| ||| | |  ||||||    
T  15869587 tggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgtta 15869686  T
Q  632 cttattt 638  Q
    |||||||    
T  15869687 cttattt 15869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 1587686 - 1587779
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| |||||| ||||  ||||||||||| |||||||||||||| |||| ||| || ||||  ||||||||||||||||||| |||||    
T  1587686 tgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgttacctattt 1587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 639
Target Start/End: Original strand, 9500446 - 9500543
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    |||||||| ||||  |||||||||| |||| ||||| | ||||||||| |||||||| ||||||| |||| ||| ||||||||||| |||||||||||    
T  9500446 aagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattta 9500543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 17077133 - 17077226
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||| ||| | ||||||||||| |||||||||  ||||||   |||||||||||| |||||||||||||  |||||||||||    
T  17077133 tgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttattt 17077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 533 - 764
Target Start/End: Original strand, 9130899 - 9131136
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatc--atatccacatggattgtcgttttgtccaaacaattcgcgtt 630  Q
    ||||| || ||||||| ||||||||||| ||||| |||||||| |||||| |||||   ||||||||||||||| |||||| ||||||| |||| | | |    
T  9130899 ggattaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtatatccacatggattatcgtttcgtccaaataatttgtgat 9130997  T
Q  631 acttattt--atagtttgacgataaaataaaagagttaa-aggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggttt 725  Q
    ||||||||   ||     |  ||||||||||||||||||  ||||| ||||||||||||||||| | |||  || | ||| ||||| ||| ||||||||     
T  9130998 acttatttggttaacaaaatcataaaataaaagagttaaggggttagagatttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttg 9131097  T
Q  726 aagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
     | |||||||||| | |||||||||||||||||||||||    
T  9131098 caaaaaagtaagctgcggttaggattcttcgaatccccc 9131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 9866637 - 9866542
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||   ||||||||| |  | | ||||||| ||||||||||||    
T  9866637 aagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccacaataattgtcgttctaactagacaattcacgttacttattt 9866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 638
Target Start/End: Original strand, 17203035 - 17203121
Alignment:
Q  551 aaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||  |||| ||||||| |||||||||||||| ||| |||  |||||||||||| ||||||||||| ||||||||||||||    
T  17203035 aaattgtttatgaagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttattt 17203121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 560 - 638
Target Start/End: Original strand, 8877441 - 8877519
Alignment:
Q  560 accaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| | ||||||| ||||||||| |  |||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaattctctgtacttattt 8877519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 9245173 - 9245279
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || || |||||| ||| ||||||||||| | ||| || |||| |||||||| ||||||||||||||||| ||| ||  |||||||||| ||||    
T  9245173 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 9245272  T
Q  632 cttattt 638  Q
    |||||||    
T  9245273 cttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 639
Target Start/End: Complemental strand, 21885258 - 21885156
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| | |||||||||    |||||||||||| | |||||||| ||| |||||||||||||   ||||||||||| ||||||    
T  21885258 ggattaggcaagtgtaccaaatgggttaccaagt----aagtgataagtaaaatatcatattcacgtggattgtcgtttcaaccaaacaattcacgttac 21885163  T
Q  633 ttattta 639  Q
    |||||||    
T  21885162 ttattta 21885156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 569 - 638
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  569 taaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||| ||||||  |||| || |||||||||||| ||||||||||||||| ||||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 4449002 - 4449078
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||||||||||||| |||||  |||||||| ||| |||| |||||||||||||||||  |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttattt 4449078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 9916568 - 9916664
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||||||  ||||||| || ||||||| |||||||||||||| |||||||||||||||| ||||   |||||||||  | |||||||||||    
T  9916568 aagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttacttattt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 9924480 - 9924576
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||||||  ||||||| || ||||||| |||||||||||||| |||||||||||||||| ||||   |||||||||  | |||||||||||    
T  9924480 aagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttacttattt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 14196069 - 14195974
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||| ||| | |||||||| |||||| |||| | |||||||| | ||| | |||| ||||||||||||||||||||||||||    
T  14196069 aagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttacttattt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 622
Target Start/End: Complemental strand, 14755227 - 14755147
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    ||||||||||||| ||||| |||||  |||||||| ||||||||||||||||||||| | ||||| |||| ||| ||||||    
T  14755227 aagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaa 14755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 18495375 - 18495471
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||||   ||||||   |||||||||||| ||| |||||||| | |||||||||||    
T  18495375 aagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatttgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  563 aagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||||||   |||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 607
Target Start/End: Original strand, 5797504 - 5797578
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    ||||| || ||||||| ||||| | ||||||||| ||||||| |||||||||||||| |||||||||| ||||||    
T  5797504 ggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtc 5797578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 21227184 - 21227278
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    ||||||||||  ||||| |||| |||||||||||||||||||||| |||| ||||| ||| ||||| |  | |  ||||||||||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatctacatgaattctcgttctaactaggcaattcgcgttacttattta 21227278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 13418536 - 13418632
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaa-gtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||| ||||||| ||||| ||||||||||||||||| |||||| | |||||||| ||| ||||||||| ||  ||||||||||||    
T  13418536 aagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttattt 13418632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 16059083 - 16059022
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||   |||||||||||    
T  16059083 taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttattt 16059022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 13277525 - 13277601
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||| |||||||| ||||||||| ||||||||||||||||| ||| |||| ||||||||  |||| ||||||    
T  13277525 caagtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattattt 13277601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 764
Target Start/End: Original strand, 17829738 - 17829794
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||| |||||||||||  |||||| ||||||||||||| |||||||||||||||||    
T  17829738 agttaactgttttggttggagaaaattaagcagtggttaagattcttcgaatccccc 17829794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 21912577 - 21912481
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||||||||| ||| | |||||||||||||| ||||||| |||| ||  ||||||||||||   | ||||||| | ||||||||||||    
T  21912577 aagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttcaacaaaacaatccacgttacttattt 21912481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 613 - 693
Target Start/End: Original strand, 1584305 - 1584385
Alignment:
Q  613 gtccaaacaattcgcgttacttatttatagtttgacgata--aaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    ||||||| |||| ||||||||||||| |  ||||||||||  ||||||||||||||||||||| ||| |||||||||||||||    
T  1584305 gtccaaataatttgcgttacttattt-tgttttgacgatataaaataaaagagttaaaggttagaga-ttgcaatttttatct 1584385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 542 - 637
Target Start/End: Complemental strand, 26134844 - 26134750
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatt 637  Q
    ||||||||||||| ||||||||||| ||||| || ||||||||||||| ||||||||| || |||| |||   | | ||||||| |||||||||||    
T  26134844 aagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccacatagactgtcatttcaactagacaattcacgttacttatt 26134750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 1872777 - 1872883
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || ||||||  ||||| ||| || |||| ||| | |||||||||||||||| |||||||||   |||||||||  | ||||||||||| ||||    
T  1872777 tggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgtta 1872876  T
Q  632 cttattt 638  Q
    |||||||    
T  1872877 cttattt 1872883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 3191130 - 3191060
Alignment:
Q  568 ataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| ||||| ||||| ||||| | | |||||||||||| |||||||||||||| |||| ||||||    
T  3191130 ataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttattt 3191060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 604
Target Start/End: Original strand, 18661592 - 18661654
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggatt 604  Q
    ||||||||||||| |||||||||   |||||||||||||||||||||  |||||||| |||||    
T  18661592 aagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatt 18661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 21230304 - 21230410
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || |||| || ||||| ||||||||| | ||||| |||||||||||||||| ||| || | ||||| |||||| ||| || ||||| | ||||    
T  21230304 tggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgtta 21230403  T
Q  632 cttattt 638  Q
    |||||||    
T  21230404 cttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 1814100 - 1814153
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgata 578  Q
    |||||||| |||| || |||||||||||||| |||||||||| |||||||||||    
T  1814100 tgatgtgttgattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 759
Target Start/End: Complemental strand, 8294005 - 8293920
Alignment:
Q  675 agatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaat 759  Q
    ||||||| ||||||||||| |||  |||| |||| ||||||||||||||||  ||||| ||  |||||||||||||||||| ||||    
T  8294005 agatttgtaatttttatctgtttgcaacagagcaagttacctgttttggttgcagaaatgttcgcagtggttaggattctttgaat 8293920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 638
Target Start/End: Original strand, 16306711 - 16306792
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| |||||||||||||||||||||| |||| ||| ||||| || |||  || |||||||| || ||||||||||    
T  16306711 tttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattacttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 23093312 - 23093380
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||||||| |||||| |||| |||||||| ||||||||||||  |||| || |||||||||||||    
T  23093312 aagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgttt 23093380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 769
Target Start/End: Original strand, 7397320 - 7397372
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatt 769  Q
    ||||||||  |||||||||||||| |||||||||||||||||| ||| |||||    
T  7397320 ttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctatt 7397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 736 - 772
Target Start/End: Original strand, 21227386 - 21227422
Alignment:
Q  736 agcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||||||||||||||||||||||||||| ||||||||    
T  21227386 agcagtggttaggattcttcgaatcccctctatttat 21227422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 638
Target Start/End: Original strand, 9261211 - 9261302
Alignment:
Q  547 taccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||| ||||||||||| | ||| ||||||| |||||||| |||||| |||||||||| ||| ||  |||||||| | ||| |||||||    
T  9261211 tacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttcgtttaaacaatttgtgttgcttattt 9261302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 638
Target Start/End: Original strand, 18466012 - 18466103
Alignment:
Q  547 taccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||  |||| ||| | |||||||||||||||||||| | |||||| | ||||| ||||||   |||||||||| | |||||||||||    
T  18466012 taccaaatcatttatcaaataataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 744 - 781
Target Start/End: Complemental strand, 2350605 - 2350568
Alignment:
Q  744 ttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  2350605 ttaggattcttcgaatcccccatatttatattgttgga 2350568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 11803240 - 11803293
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||  ||| |||||| ||| |||||||||| |||||||||||    
T  11803240 ttacctgttttggttgcagagaagtaaccagcggttaggattattcgaatcccc 11803293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 12391187 - 12391256
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||||||| ||||| ||| | ||||||||||||| ||||| || ||| |||| | ||||||||||    
T  12391187 aagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgttt 12391256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 761
Target Start/End: Original strand, 13418660 - 13418744
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcc 761  Q
    ||||||||||||||| |||  |||| ||||   |||||||||||| ||  || ||||||||||| ||||||||||||| ||||||    
T  13418660 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttgattgcagcaaagtaagcagcggttaggattctttgaatcc 13418744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Complemental strand, 21102374 - 21102321
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||| |||||||||||||||||||||  ||| ||||  |||||||||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgttt 21102321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 525 - 781
Target Start/End: Original strand, 25618542 - 25618797
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||| ||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25618542 tgatgtgcggattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaatt 25618640  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttgg 722  Q
    ||||| |||||||| ||| ||||||||| ||||||||||| ||| |||| ||||||||||||||||||| |||  |||| || |   |||||||||||||    
T  25618641 cgcgtaacttatttttag-ttgacgatataataaaagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctgttttgg 25618739  T
Q  723 tttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  |||||||||||||| |||| | ||||||||||||||||| ||||||||| |||||    
T  25618740 ttgcagaaaagtaagcagcggttcgaattcttcgaatcccccc-atttatattgttgga 25618797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 533 - 781
Target Start/End: Original strand, 32085456 - 32085704
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||  ||| |||||    
T  32085456 ggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttac 32085555  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaaga 729  Q
    |||||| ||  ||||||  ||||||||||||||||||  |||| ||| ||||||||||||||| |||  |||| ||| ||||||||| |||||||  |||    
T  32085556 ttattt-taagttgacgatataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctggtttggttgcaga 32085653  T
Q  730 aaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||| |||||||| ||||  ||| |||||||||||| || |||||    
T  32085654 aaagtaagcagcggttaggactctttaaat-ccccctatttattttgttgga 32085704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 526 - 772
Target Start/End: Complemental strand, 29719344 - 29719097
Alignment:
Q  526 gatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattc 625  Q
    |||||| ||||| || ||||||||||||| ||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||| || ||||||||||    
T  29719344 gatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattc 29719245  T
Q  626 gcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgt-tttgg 722  Q
    ||||||||||||| |||||||||| || ||||||| |  ||| ||||| ||| ||||||||||||| | | |  |||| ||||   |||||||| |||||    
T  29719244 gcgttacttatttttagtttgacggtataataaaata--taagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttgg 29719147  T
Q  723 tttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    ||  ||||||||||||||  ||||||||||||||||||||| ||||||||    
T  29719146 ttgcagaaaagtaagcagcagttaggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 524 - 772
Target Start/End: Complemental strand, 11382868 - 11382620
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    ||||||||||||||    ||||||| ||||| ||||||||  | ||||||||||||||||||||||||||||||||| |||||  |||  |||||| |||    
T  11382868 gtgatgtgtggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataat 11382769  T
Q  624 tcgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttg 721  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||||| |||||||| |||  |||| ||| |||||| || ||||     
T  11382768 tcgcgttacttatttttagtttgacgataagataaaagagttaaaagttagagatttgcaaattttatctgtttgcaacagagcaagttacttgtttttt 11382669  T
Q  722 gtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||  |||||||||| || | |||| |||||||||||  ||||||||||||    
T  11382668 gttgtagaaaagtaaacaattgttatgattcttcgaa--ccccctatttat 11382620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 534 - 762
Target Start/End: Complemental strand, 20174740 - 20174512
Alignment:
Q  534 gattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttact 633  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttact 20174641  T
Q  634 tatttatagtt--tgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaa 730  Q
    |||||  ||||  |||  ||||||||||| |||||| ||||| ||| ||| ||||||||||| |||  |||| ||| | ||||||| ||||||  |||||    
T  20174640 tattttaagttgatga-tataaaataaaatagttaagggttagaga-ttggaatttttatctgtttgcaacagagcaaattacctg-tttggtaaaagaa 20174544  T
Q  731 aagtaagcagtggttaggattcttcgaatccc 762  Q
    |||||||||| |||||| | ||||||||||||    
T  20174543 aagtaagcagcggttagcactcttcgaatccc 20174512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 524 - 775
Target Start/End: Original strand, 15339222 - 15339475
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    |||||||| ||||| || |||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  15339222 gtgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaat 15339321  T
Q  624 tcgcgttactta-tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttt 719  Q
    | |||||||||| ||| ||  || | |||| |||||||||  ||| ||||| ||| ||||||||||||| | |||  |||| ||||   ||| ||| |||    
T  15339322 tagcgttacttactttgtaagttaaggatataataaaaga--taagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgtttt 15339419  T
Q  720 tggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    | |||  ||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  15339420 ttgttgcagaaaagtaagcagcagttaggattcttcaaatcccctctatttatatt 15339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 542 - 781
Target Start/End: Complemental strand, 27909216 - 27908975
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| || | ||||  |||||||||||| |||||||||||| |     
T  27909216 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttttg 27909117  T
Q  641 --agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaa 736  Q
      |||||||||||   |||||||    || ||||| |   ||||||||||||||| |||  |||| ||||   |||||||||||||||  |||||| |||    
T  27909116 taagtttgacgat---ataaaagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaattaa 27909020  T
Q  737 gcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||| |||||||||||||||||||||||||||||||||| |||||    
T  27909019 gcagcggttaggattcttcgaatcccccctatttatattgttgga 27908975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 525 - 781
Target Start/End: Complemental strand, 26603464 - 26603217
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||||||||| ||||| | |||||||||||||||||||| |||  | |||||||||| ||| || |||||||||    
T  26603464 tgatgtgcggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaatt 26603365  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcag-ttacctg-ttttgg 722  Q
      |||||||||||| | |||||||| ||  ||||||||  || | |        ||||||||||||||| |||  |||| ||||| ||||||| ||||||    
T  26603364 gacgttacttatttttggtttgacggtatgataaaaga--tagatg--------ttgcaatttttatctgtttgcaacagagcagtttacctgtttttgg 26603275  T
Q  723 tttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  |||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  26603274 ttgtagaaaagtaagcagcggttaggattcttcgaat-ccccctatttatattgttgga 26603217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 17743573 - 17743477
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||    
T  17743573 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 525 - 638
Target Start/End: Complemental strand, 25888334 - 25888225
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    |||||||||    
T  25888334 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaatt 25888239  T
Q  625 cgcgttacttattt 638  Q
    ||||||||||||||    
T  25888238 cgcgttacttattt 25888225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 542 - 757
Target Start/End: Original strand, 25196013 - 25196229
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||| |||||||||||| ||    
T  25196013 aagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattttta 25196111  T
Q  642 gt---ttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagt 734  Q
     |   |||||||| | |||    |||||| ||||  ||||| ||| ||||||||| | |||  |||||||||   |||||||||||||||  | ||||||    
T  25196112 ttaagttgacgat-atata----agttaatggttaaaaagacttgaaatttttatatgtttgcaacatagcaagtttacctgttttggttgcaaaaaagt 25196206  T
Q  735 aagcagtggttaggattcttcga 757  Q
    |||||||||||||||||||||||    
T  25196207 aagcagtggttaggattcttcga 25196229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 540 - 638
Target Start/End: Complemental strand, 45621980 - 45621882
Alignment:
Q  540 gaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| |||| ||||||||||| ||||||||| |||||||||||| |||| ||| |||||||||||| |||||||||||||| |||||||||||    
T  45621980 gaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattt 45621882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 558 - 763
Target Start/End: Original strand, 28925539 - 28925746
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat---agtttgacgataaa 654  Q
    ||||||||| ||||||||||||||||||  |  ||||||| ||||||||||||| |||||||||||||  |||| |||||| |   ||||||||||||      
T  28925539 ttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttatttttgtaagtttgacgata-- 28925636  T
Q  655 ataaaagagttaaaggttaaagat-ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggatt 751  Q
     ||||||| | || ||||| | |  ||||||||||||| | |||  |||||||||   |||||||||||||||  |||||||||||||| ||||||||||    
T  28925637 -taaaaga-taaagggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctgttttggttgcagaaaagtaagcagaggttaggatt 28925734  T
Q  752 cttcgaatcccc 763  Q
    ||||||||||||    
T  28925735 cttcgaatcccc 28925746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 542 - 765
Target Start/End: Complemental strand, 23011859 - 23011636
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||| |||||||||| |||||||| |||||||| |||  |||||||| |||||||||||||||| |||||||| |||||| |||||  ||    
T  23011859 aagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttatt--ta 23011763  T
Q  642 gt-ttgacgat---aaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaa 736  Q
    || | ||||||   | |||||||||||||| ||||| | | ||| |||||||||||||||  |||||| | ||||||||  |||||||  ||||||||||    
T  23011762 gtctagacgatataataataaaagagttaagggttagata-ttgaaatttttatctatttccaacatatcaagttacct-atttggttgtagaaaagtaa 23011665  T
Q  737 gcagtggttaggattcttcgaatcccccc 765  Q
     ||| ||||| || ||||| |||||||||    
T  23011664 ccagcggttaagactcttcaaatcccccc 23011636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 525 - 691
Target Start/End: Complemental strand, 31805014 - 31804848
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| | ||| |||||||||||||||||||||||||| | |||||||||||||||||||||  ||||||||  ||||| ||||| |||||| ||||     
T  31805014 tgatgtgcgaattaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatc 31804915  T
Q  625 cgcgttactta--tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttat 691  Q
     | ||||||||  ||| ||  ||||||||| |||||||||  ||| ||||| ||| |||||||||||||    
T  31804914 tgtgttacttatttttgtaagttgacgatataataaaaga--taagggttagagagttgcaatttttat 31804848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 545 - 781
Target Start/End: Original strand, 17349362 - 17349591
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta-tttatagt 643  Q
    ||||| |||| ||||||||||| |||||||| ||||||||||||| ||||||||  ||||||||||| ||||||||| ||||||||||||| ||| ||      
T  17349362 tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttgtaag 17349460  T
Q  644 ttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaagtaagcag 740  Q
    ||||||||| |||||||||  ||| ||        ||||||||||||||| |||  |||| ||||   |||| || ||||||||  | ||||||||||||    
T  17349461 ttgacgatataataaaaga--taaggg--------ttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcag 17349550  T
Q  741 tggttaggattcttcgaatcccccctatttatattcttgga 781  Q
     ||| || ||||||||||||||| ||||||||||| |||||    
T  17349551 cggtcagaattcttcgaatcccctctatttatattgttgga 17349591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 8503167 - 8503071
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||| |||   |||||||||| |||||||| ||||    
T  8503167 aagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaattt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 12953391 - 12953295
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||| ||||| ||||||| |||||||||||||  | ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  12953391 aagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattt 12953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 764
Target Start/End: Original strand, 45553132 - 45553353
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| | |||| |||  ||| ||||||||||||||||||| ||||||| |||| ||||||  |    
T  45553132 aagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaattattt-ga 45553230  T
Q  642 gtttgacgataaaataaaagagttaaagg-ttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagca 739  Q
    |    |  |||| ||||||||| | | || ||| ||||||||||||||||||| |||  |||||||| |||||||||||||||||  || || || ||||    
T  45553231 g-aacaaaataatataaaagagctgacggtttagagatttgcaatttttatctgtttgcaacatagcaagttacctgttttggttgcag-aacgttagca 45553328  T
Q  740 gtggttaggattcttcgaatccccc 764  Q
    | ||||||||||||| |||||||||    
T  45553329 gcggttaggattctttgaatccccc 45553353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 545 - 768
Target Start/End: Complemental strand, 25885553 - 25885331
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    |||||||||| |||||| |||| |||| |||||||| | |||||| |||||||| | |||||||||| |||||||||||| | ||||||||||| || |     
T  25885553 tgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttattt-tattc 25885456  T
Q  645 tgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagt 741  Q
     ||||  |||||||||||||||||| ||||| | |||| |||||||||||| ||   || | || | ||||||||  ||||||  |||||||||||||||    
T  25885455 cgacgatataaaataaaagagttaagggttagatattt-caatttttatctgttcggaatagagaaggttacctg-gttggttgtagaaaagtaagcagt 25885358  T
Q  742 ggttaggattcttcgaatcccccctat 768  Q
    |||||||| |||| |||| ||||||||    
T  25885357 ggttaggactctttgaattccccctat 25885331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 693
Target Start/End: Original strand, 13776341 - 13776490
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| ||||| |||||  || | |||||||||||||| ||||||| ||||||||| ||||||| ||| ||||||||||  | |||||||||||| ||    
T  13776341 aagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttacttattt-ta 13776438  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatct 693  Q
      ||||||||||||| |||||| ||| |||||| |||||||||||||||||||    
T  13776439 agttgacgataaaat-aaagagataagggttaagagatttgcaatttttatct 13776490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 644
Target Start/End: Complemental strand, 9774414 - 9774330
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtt 644  Q
    ||||||||  ||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttatttttagtt 9774330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 651 - 781
Target Start/End: Complemental strand, 25887893 - 25887760
Alignment:
Q  651 taaaataaaagagttaaagg-ttaaagatttgcaatttttatctatttaaaacatagca-gttacctgtttt-ggtttaagaaaagtaagcagtggttag 747  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||| |||  |||| |||| ||||||| |||| ||||  |||||||||| ||| | |||     
T  25887893 taaagtaaaagagttaaagggttagagatttgcaatttttatctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaaccagcgattat 25887794  T
Q  748 gattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||| ||||||||||||||||||| |||||    
T  25887793 gattcttcaaatcccccctatttatattgttgga 25887760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 30411680 - 30411776
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||  ||||||| || |||||||||||||||||||||| |||| ||| |||||||| ||| |||| ||||||| |||||||||||||    
T  30411680 aagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattt 30411776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 27418389 - 27418464
Alignment:
Q  563 aagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||||||||||||||||||||||||||||||||||| || |||   |||||||||||| |||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattt 27418464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 639
Target Start/End: Complemental strand, 8447146 - 8447050
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||    | | |||| ||||||||||||||||    
T  8447146 aagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgttccaactagacaactcgcgttacttattta 8447050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 546 - 635
Target Start/End: Complemental strand, 30900937 - 30900848
Alignment:
Q  546 gtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    ||||||||||||||||||| | |||||||||||| ||||||||  ||||||| |  ||||| |||| ||| |||||||||||||||||||    
T  30900937 gtaccaaattgtttaccaaataataaagtgataactagagtattgtatccacgtatattgttgtttcgtctaaacaattcgcgttactta 30900848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 24091003 - 24090927
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||||| |||| |||| ||||||||||||||||| ||| |||||||||||||  |||||||||||    
T  24091003 caagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattt 24090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 25535296 - 25535372
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||| ||| |||| ||||||||  |||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattt 25535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 769
Target Start/End: Original strand, 17889939 - 17890167
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| |||||| || | ||| |||| ||||||| ||||||||| || | |||||||||||| |  ||||||||| |||||| ||||||       
T  17889939 aagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcgatcaaacaatttgcgttaattatttg-- 17890035  T
Q  642 gtttgacgata---aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaag 737  Q
    |||| || | |   ||||||||||||| |||| |||  | ||||||||||||| | |||  |||| |||| ||||||||||||||||  ||||| |||||    
T  17890036 gtttaacaaaatataaataaaagagttgaaggataagaagttgcaatttttatatgtttgcaacagagcaagttacctgttttggttgcagaaatgtaag 17890135  T
Q  738 cagtggttaggattcttcgaatcccccctatt 769  Q
    ||  | ||| |||||||  |||||||||||||    
T  17890136 caacgattaagattctttcaatcccccctatt 17890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 19200231 - 19200126
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  |||||||| | |||| ||||||||| ||||||| |||||||| ||||||||||||  ||||||||| || | ||||||||||  |    
T  19200231 aagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaactcacattacttattttaa 19200133  T
Q  642 gtttgac 648  Q
    |||||||    
T  19200132 gtttgac 19200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 638
Target Start/End: Complemental strand, 17635869 - 17635776
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||| |||||| || |||||||| ||||||||||||  ||||||||||| ||| ||| || || ||||||||||||    
T  17635869 tgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttattt 17635776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 710 - 763
Target Start/End: Complemental strand, 24090866 - 24090813
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  24090866 ttacctgttttggttgcagaaaagtaagcagtggttaggatgcttcgaatcccc 24090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 25920303 - 25920364
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||||||||| ||| |||| |||||||| ||||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttattt 25920364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 693
Target Start/End: Original strand, 29027507 - 29027649
Alignment:
Q  551 aaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacga 650  Q
    |||| ||||||||| | |||||||||| || |||||||  ||| |||||| ||||| ||||||| |||| |||| ||||||||||||| ||  ||| |||    
T  29027507 aaatcgtttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttacttattt-taagttgccga 29027605  T
Q  651 ta--aaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    ||  ||||||||||| ||| ||||| ||| |||||||||||||||    
T  29027606 tattaaataaaagagataagggttagaga-ttgcaatttttatct 29027649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 590
Target Start/End: Complemental strand, 20173412 - 20173347
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatca 590  Q
    |||||||| ||||| |||||||||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  20173412 gtgatgtgcggattaggaaagtgtaccaaatcgtt-accaagttataaagtgataagcagagtatca 20173347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 679 - 764
Target Start/End: Complemental strand, 23933505 - 23933419
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||||||||| |||  |||| |||| ||||| || |||||||| | |||||||||||| ||||||||||||| |||||||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaagttacttggtttggtttcacaaaagtaagcagcggttaggattctttgaatccccc 23933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 638
Target Start/End: Complemental strand, 28770538 - 28770444
Alignment:
Q  544 gtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||  |||||||| | |||||||||||||||||||||| |||||| | | | |||| |||  |||||||||||| || |||||||||    
T  28770538 gtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctacttattt 28770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 550 - 639
Target Start/End: Original strand, 9239156 - 9239245
Alignment:
Q  550 caaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    |||||||||| | |||| ||||| |||||||||||  |||||||||||||| ||| |||||||  ||||| |||| | ||||||||||||    
T  9239156 caaattgtttcctaagtaataaaatgataagtagaacatcatatccacatgaattttcgttttaaccaaataattagtgttacttattta 9239245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 25530469 - 25530545
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||| ||| ||||  | ||||| | ||||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttattt 25530545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 679 - 764
Target Start/End: Original strand, 25530574 - 25530661
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagc--agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||||||||| |||  |||| |||  | |||||||||||||||  | || ||||||||| |||||||||||||||||||||||    
T  25530574 ttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcaaaatagtaagcagcggttaggattcttcgaatccccc 25530661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 29142983 - 29143059
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||  ||||||||||||| | |||||||||||||||||  || || | |||||||||||||||||||||    
T  29142983 caagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttattt 29143059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 764
Target Start/End: Original strand, 25535433 - 25535487
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    |||||||||||||||  | |||||||||||| |||| ||||||||||||||||||    
T  25535433 ttacctgttttggttgcaaaaaagtaagcagcggttgggattcttcgaatccccc 25535487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 5777253 - 5777314
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| ||||||  ||| | |||||||||||||| ||||||||||||| ||||||||||||    
T  5777253 taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 781
Target Start/End: Complemental strand, 17675589 - 17675485
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattc 776  Q
    ||||||||||||||| |||  |||| ||||   |||||||||||||||  |||||| ||| ||| |||||| ||| ||||||| |||||| ||||||||     
T  17675589 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttatattg 17675490  T
Q  777 ttgga 781  Q
    |||||    
T  17675489 ttgga 17675485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 29143088 - 29143174
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||  |||| ||||   |||||| ||||||||  |||||||||| ||| ||||| ||||||||||||||||    
T  29143088 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgtagaaaagtaaacagcggttaagattcttcgaatcccc 29143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 717 - 764
Target Start/End: Original strand, 30411846 - 30411893
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||||    
T  30411846 ttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 30411893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 717 - 763
Target Start/End: Original strand, 17198035 - 17198081
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  17198035 ttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccc 17198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 17675724 - 17675658
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||| ||||| ||||||||||| |||||| || |||||||| |||||||| |||  |||||||||||    
T  17675724 tgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgttt 17675658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  580 gtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||  |||| |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 26667465 - 26667519
Alignment:
Q  710 ttacctgtttt-ggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||| ||||  |||||||||| ||| ||||||||||||||||||||||    
T  26667465 ttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccc 26667519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 720
Target Start/End: Complemental strand, 28606239 - 28606096
Alignment:
Q  578 aagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaa 675  Q
    |||||||||||| |||||||  |||||||||||| ||| |||||  | ||||||||||||| ||  ||||||  ||| ||||||||||  || ||||| |    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattt-taagttgacgatatataataaaagagacaagggttaga 28606141  T
Q  676 gatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    || ||||||||||||| | ||||  ||||| | |||||||||||||    
T  28606140 ga-ttgcaatttttatttgtttacgacataacaagttacctgtttt 28606096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 12557805 - 12557737
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||||||||||  |||||||||| |||||||| |||||||| ||||  ||||||| |||||| |||||    
T  12557805 aagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgttt 12557737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 26667355 - 26667416
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| |||||||| ||||| || ||| || | |||||||| ||||||||||||    
T  26667355 taagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttattt 26667416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 32440093 - 32440025
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||||||||||||||||||  |||||||| ||| || |||||| |||||||  ||||| ||||||    
T  32440093 aagtgtaccaaattgtttaccaagaaataaagtg-taaataaagtatcgtatccacgaggattatcgttt 32440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 539 - 781
Target Start/End: Complemental strand, 36095 - 35851
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| |||| ||||  ||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||  |||||| |||||| |||||||||||    
T  36095 ggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattt 35996  T
Q  639 atagtttgacgataaaataaaagagttaaa-ggttaaagatttgcaatttttatctatttaaaacatag-cagttacctg-ttttggtttaagaaaagta 735  Q
      ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||  |||| ||  ||||||||| ||||||||  |||||||||    
T  35995 taagtttgacgataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagttacctgattttggttgcagaaaagta 35896  T
Q  736 agcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  35895 agcagcggttaggattcttagaat-ccccctatttatattgttgga 35851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 8e-57; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 525 - 784
Target Start/End: Complemental strand, 12183445 - 12183185
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| |||||  | ||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||||    
T  12183445 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaatt 12183346  T
Q  625 cgcgttacttatttatagtttgacg--ataaaataaaagag-ttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    | |||||||||||| ||   |||||  |||||||||||||| |||||||||| ||| ||||||| ||||||| |||  |||||||| |||||||||||||    
T  12183345 cacgttacttattt-taaggtgacgatataaaataaaagagtttaaaggttagaga-ttgcaatgtttatctgtttgcaacatagcaagttacctgtttt 12183248  T
Q  721 ggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttggacat 784  Q
    ||||  |||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||||    
T  12183247 ggttacagaaaagtaagcaacggttaggattcttcgaat-ccccctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 525 - 772
Target Start/End: Complemental strand, 21672549 - 21672300
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||    
T  21672549 tgatgtgcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21672450  T
Q  625 cgcgttacttatttatagtttgacgataaaataa-aagagttaaagg-ttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttg 721  Q
    || ||||||| ||| ||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||  |||  ||| |||||||||||||     
T  21672449 cgtgttacttttttttag-ttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttc 21672351  T
Q  722 gtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||  | |||||||||  | |||||||| | ||  ||||||||||||||||    
T  21672350 gttgcataaaagtaagtggcggttaggaatatttcaatcccccctatttat 21672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 525 - 772
Target Start/End: Complemental strand, 21679965 - 21679716
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||| ||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||    
T  21679965 tgatgtgcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21679866  T
Q  625 cgcgttacttatttatagtttgacgataaaataa-aagagttaaagg-ttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttg 721  Q
    || ||||||| ||| ||| ||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||  |||  ||| |||||||||||||     
T  21679865 cgtgttacttttttttag-ttgacgataaaataataagagttaaaggattagagatttgcaatttttatctatttgcaactgagcaagttacctgttttc 21679767  T
Q  722 gtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||  | |||||||||  | |||||||| | ||  ||||||||||||||||    
T  21679766 gttgcataaaagtaagtggcggttaggaatatttcaatcccccctatttat 21679716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 533 - 761
Target Start/End: Complemental strand, 27737795 - 27737565
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||| |||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||||||    
T  27737795 ggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttac 27737696  T
Q  633 ttatttat--agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaag 728  Q
    |||||| |  |  ||||||||||||| |||||  ||| ||||| ||| ||||||||||||||| |||  |||| ||||   ||||||||||| |||  |     
T  27737695 ttatttttgtaagttgacgataaaatgaaaga--taagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgttgcaa 27737598  T
Q  729 aaaagtaagcagtggttaggattcttcgaatcc 761  Q
    |||||||||||| ||||||||||||||||||||    
T  27737597 aaaagtaagcagcggttaggattcttcgaatcc 27737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 525 - 693
Target Start/End: Complemental strand, 18075502 - 18075333
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||     
T  18075502 tgatgtgcggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatc 18075403  T
Q  625 cgcg-ttacttatttatagtttgacgataaaataaaagagtt-aaaggttaaagatttgcaatttttatct 693  Q
     | | |||||||||| ||| ||||| |||||||||||||||| |||||||||| ||||| |||||||||||    
T  18075402 tgagtttacttatttttag-ttgacaataaaataaaagagttaaaaggttaaaaatttgtaatttttatct 18075333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 527 - 772
Target Start/End: Original strand, 4339722 - 4339967
Alignment:
Q  527 atgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcg 626  Q
    ||||||||||| |  ||||||||||||||||||| ||| | |||||||||||||||||||||  ||||||||  |||||||||||||||||| |||||||    
T  4339722 atgtgtggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcg 4339821  T
Q  627 cgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggt 723  Q
    | |||||||||| ||||||||||  |||||||||||||| ||| ||||| ||| || |||| ||||| | |||  |||  ||| ||||||||||||||||    
T  4339822 cattacttattt-tagtttgacgatataaaataaaagagataagggttagaga-ttacaatatttatttgtttgcaactaagcaagttacctgttttggt 4339919  T
Q  724 ttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |  |||||||||| ||| ||| ||| |||||| ||||| ||||||||||    
T  4339920 tgcagaaaagtaaccagcggtcagggttcttc-aatcctccctatttat 4339967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 524 - 703
Target Start/End: Original strand, 23143706 - 23143884
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    |||||||| ||||| || |||||||||||||  |||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  23143706 gtgatgtgcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaat 23143805  T
Q  624 tcgcgttactta-tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaaca 703  Q
    ||  |||||||| ||| ||  ||||||||| |||||||||  ||||||||| ||| || |||||||||||| |||| ||||    
T  23143806 tcatgttacttattttgtaagttgacgatataataaaaga--taaaggttagagagtttcaatttttatctgtttacaaca 23143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 568 - 764
Target Start/End: Original strand, 9838384 - 9838581
Alignment:
Q  568 ataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacg--ataaaataaaagagtt 665  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||  |||||| ||||||||||||||| ||||||||||  |||||||||||||||     
T  9838384 ataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttattt-tagtttgacgatataaaataaaagagtg 9838482  T
Q  666 aaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||  |||| ||| ||| ||||||||||| |||  || | ||| ||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  9838483 aagcgttagaga-ttgtaatttttatctgtttgcaaaagagcaagttacccgttttggttgcagaaaagtaagcaatggttaggattcttcaaatccccc 9838581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 9726015 - 9726120
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  9726015 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttac 9726114  T
Q  633 ttattt 638  Q
    ||||||    
T  9726115 ttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 533 - 740
Target Start/End: Original strand, 8241270 - 8241475
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| |||||| |||| | |||||||||||||||||||| |||||||| || ||| ||||||||||||||||||| | ||||    
T  8241270 ggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattac 8241367  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaaga 729  Q
    |||||| |||||| |||  ||||||||||||||||||  |||| ||| ||||||||||||||| |||  |||||||| ||||||||| |||||||  |||    
T  8241368 ttattt-tagtttcacgatataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgcaacatagcaagttacctg-tttggttgtaga 8241464  T
Q  730 aaagtaagcag 740  Q
    |||||||||||    
T  8241465 aaagtaagcag 8241475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 545 - 772
Target Start/End: Complemental strand, 23645861 - 23645633
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat-agt 643  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||||| | |||||||||||| ||||||||||||  ||||| |||||| | |      
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaac 23645762  T
Q  644 ttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtg 742  Q
       |  |||||||||||||||| | ||||| ||| ||||||||||||| | |||  |||| ||| |||||| ||||||||||  | ||||||||||||||    
T  23645761 aataaaataaaataaaagagttgagggttagaga-ttgcaatttttatttgtttgcaacagagcaagttacatgttttggttgcataaaagtaagcagtg 23645663  T
Q  743 gttaggattcttcgaatcccccctatttat 772  Q
    |||||| ||||| |||||| | ||||||||    
T  23645662 gttaggcttctttgaatccgctctatttat 23645633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 9516787 - 9516883
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9516787 aagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattt 9516883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 542 - 780
Target Start/End: Complemental strand, 23844562 - 23844322
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| | | |||||||||||| |||||||||| ||||||||||||  |||     
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T
Q  640 tagtttgacgataaaataaaagagttaaaggttaaagat-ttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaa 736  Q
    ||  ||||||||   ||||||||   || ||||| | || ||||||||||||||| |||  || | | ||   |||||||||||||||  | ||||||||    
T  23844462 taagttgacgat---ataaaagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctgttttggttgcataaaagtaa 23844366  T
Q  737 gcagtggttaggattcttcgaatcccccctatttatattcttgg 780  Q
    |||| |||||||||| |||||||||| ||| |||||||| ||||    
T  23844365 gcagcggttaggatttttcgaatccctcctgtttatattgttgg 23844322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 533 - 766
Target Start/End: Complemental strand, 28933766 - 28933532
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| ||||||||||||| |||||||| ||| | |||||||||||||||||||||| |||||||| ||||| |||||| |||||||||||| | ||| |    
T  28933766 ggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgc 28933667  T
Q  633 ttatttatagtt--tgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgtt-ttggtttaag 728  Q
    ||||||  ||||  |||  |||||||||||||| ||| ||||| ||| ||||||||||||||| |||  |||| ||| |||||| |||| ||||||  |     
T  28933666 ttattttaagttgatga-tataaaataaaagagataagggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacttgttcttggttgca- 28933570  T
Q  729 aaaagtaagcagtggttaggattcttcgaatcccccct 766  Q
    ||||| || ||| |||||||| |||| |||||||||||    
T  28933569 aaaaggaaacagcggttaggactctttgaatcccccct 28933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 528 - 632
Target Start/End: Original strand, 17729140 - 17729244
Alignment:
Q  528 tgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgc 627  Q
    |||| ||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||| |||||||| ||||||    
T  17729140 tgtgcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgc 17729239  T
Q  628 gttac 632  Q
    |||||    
T  17729240 gttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 542 - 759
Target Start/End: Complemental strand, 17827189 - 17826974
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||| | |||||  |||| ||||||| |||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||| |     
T  17827189 aagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttatttttt 17827090  T
Q  642 gtttgacgataaaataaaagagttaaaggtt-aaagatttgcaatttttatctatttaaaacatagcag-ttacctg-ttttggtttaagaaaagtaagc 738  Q
     ||||||   || ||||||||  ||| |||| ||||| ||||||||||||| | |||  |||||||||| |||| || ||||||||  ||||||||||||    
T  17827089 ttttgac---aatataaaaga--taagggttaaaagagttgcaatttttatatgtttgcaacatagcagtttacttgtttttggttgcagaaaagtaagc 17826995  T
Q  739 agtggttaggattcttcgaat 759  Q
    |  |||||| |||||| ||||    
T  17826994 aacggttagaattctttgaat 17826974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 22566266 - 22566163
Alignment:
Q  535 attgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactt 634  Q
    |||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||||| || ||| || |||||||||||||||    
T  22566266 attgggtaaatgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttactt 22566167  T
Q  635 attt 638  Q
    ||||    
T  22566166 attt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 545 - 784
Target Start/End: Original strand, 5624645 - 5624886
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatat-ccacatggattgtcgttttgtccaaacaattcgcgttacttatttat--- 640  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||| | | |  |||||||||||||| ||||||||| ||||||||||||| |       
T  5624645 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgta 5624744  T
Q  641 agtttgacgataaaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagcag-ttacctg-ttttggtttaagaaaagtaag 737  Q
    |||||||||     ||| || |||||| ||||| ||   ||||||||||||||| |||  || | ||||| ||||| | ||||||||  |||||||||||    
T  5624745 agtttgacg-----atagaaaagttaagggttagaaaggttgcaatttttatctgtttgtaatagagcagtttaccggcttttggttgcagaaaagtaag 5624839  T
Q  738 cagtggttaggattcttcgaatcccccctatttatattcttggacat 784  Q
    ||| ||||||||||||||||||| ||| || | ||||| ||||||||    
T  5624840 cagcggttaggattcttcgaatctcccataatcatattgttggacat 5624886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 533 - 637
Target Start/End: Complemental strand, 25927409 - 25927305
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||  ||||||||||| ||||||||||||||||| |||| |||||||||||||| | |||| ||||||||||||| ||||||    
T  25927409 ggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttac 25927310  T
Q  633 ttatt 637  Q
    |||||    
T  25927309 ttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 556 - 763
Target Start/End: Complemental strand, 23232066 - 23231859
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat---agtttgacgata 652  Q
    ||||||||||| |||||||||||||||| |||||||||||| | | ||||||| || |||||||||||||||||||||||||| |   |||||||||||     
T  23232066 gtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgat- 23231968  T
Q  653 aaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagc--agttacctgttttggtttaagaaaagtaagcagtggttagga 749  Q
      |||||  |||||| ||||| |||  |||||| |||||||| |||  |||| |||  | |||| ||||||||||  |||||||||||||  | ||||||    
T  23231967 --ataaa--agttaacggttagaagtcttgcaa-ttttatctgtttgcaacagagcaaatttacttgttttggttatagaaaagtaagcaacgtttagga 23231873  T
Q  750 ttcttcgaatcccc 763  Q
    ||||||||||||||    
T  23231872 ttcttcgaatcccc 23231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 533 - 635
Target Start/End: Original strand, 21907425 - 21907527
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||| |||||||| ||||||||||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||| || |||||||||    
T  21907425 ggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttac 21907524  T
Q  633 tta 635  Q
    |||    
T  21907525 tta 21907527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 556 - 662
Target Start/End: Complemental strand, 22410410 - 22410304
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaa 655  Q
    ||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||  | |||||||||| |||||||||||| ||  ||||||||| ||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataa 22410311  T
Q  656 taaaaga 662  Q
    |||||||    
T  22410310 taaaaga 22410304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 533 - 739
Target Start/End: Original strand, 22567833 - 22568039
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||||||||||||||| |||| |||| ||||| |||||  |||||||||||||||| |||| |||||||||| || ||||||    
T  22567833 ggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgttac 22567932  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaaga 729  Q
    |||||| ||  || |||  |||||||||||| ||||| ||||| ||| ||| || |||||||| |||  |||| || |||||||||  |||||||  |||    
T  22567933 ttattt-taagttaacgatataaaataaaagggttaagggttagaga-ttgtaa-ttttatctgtttgcaacagagtcagttacctagtttggttgcaga 22568029  T
Q  730 aaagtaagca 739  Q
    ||||||||||    
T  22568030 aaagtaagca 22568039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 539 - 763
Target Start/End: Complemental strand, 27124592 - 27124369
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||| ||||||||||| |||||||||||| || | |||| |||| |||||||||||||||| |  |||||||||| ||||||||||||    
T  27124592 ggaaagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttattt 27124493  T
Q  639 at-agtttgacgataaaataaaagagttaaaggtt-aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagt 734  Q
     | |  ||||||||   |||||| |  ||| |||| ||||| || |||||||||| | |||  |||| ||||   |||||||| ||||||  ||||||||    
T  27124492 ttgaacttgacgat---ataaaaca--taagggttaaaagacttccaatttttatatgtttgcaacagagcaagtttacctgtcttggttgcagaaaagt 27124398  T
Q  735 aagcagtggttaggattcttcgaatcccc 763  Q
    |||||| ||||| ||||||| ||||||||    
T  27124397 aagcagcggttaagattctttgaatcccc 27124369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 533 - 720
Target Start/End: Original strand, 11176943 - 11177131
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||| ||| ||||||| |||  ||||||||||||||||||||| ||||||||||| |||||||||  || ||| |||||| |||||    
T  11176943 ggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttac 11177042  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    |||||| ||  ||||||  |||||||||||||| ||| ||||| | | |||||||||||||   |||  |||||||| |||||||||||||    
T  11177043 ttattt-taaattgacgatataaaataaaagagataagggttaga-aattgcaatttttataagtttgcaacatagcaagttacctgtttt 11177131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 545 - 638
Target Start/End: Complemental strand, 17299925 - 17299832
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||| ||| ||   |||||||||||| |||||||||||| |||||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 533 - 679
Target Start/End: Complemental strand, 21688901 - 21688754
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| |||||||||||| ||| |||||| |||| || ||||||||||||||||||  |||||| | |||||||||||   |||||| ||||||||||||    
T  21688901 ggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttac 21688802  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatt 679  Q
    ||||||  || |||| |  ||||||||||||||||| |||||| |||||    
T  21688801 ttattttgag-ttgaagatataaaataaaagagttagaggttagagatt 21688754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 533 - 762
Target Start/End: Original strand, 15466363 - 15466592
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||||||||| |||||||| || |||||||||| |||| | | |||||||| ||| ||| |||||||||||||||     
T  15466363 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttag 15466461  T
Q  633 ttatttatagtttgacgat---aaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaag 728  Q
    |||||| |  ||| |||||   | |||||||||||||| ||||| ||| |||||| |||||||| |||  |||| ||| ||||||||  |||||||  ||    
T  15466462 ttattt-tgttttaacgatataataataaaagagttaagggttagaga-ttgcaaattttatctgtttgcaacagagcaagttacct-atttggttgcag 15466558  T
Q  729 aaaagtaagcagtggttaggattcttcgaatccc 762  Q
    |||||||| ||| |||||| | ||||| ||||||    
T  15466559 aaaagtaaacagcggttagaactcttcaaatccc 15466592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 619
Target Start/End: Complemental strand, 20005976 - 20005899
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaa 619  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||| |||| ||||||||| |||||| |||||||    
T  20005976 aagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 7543054 - 7542962
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatt 637  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||| |||| |  |||| ||| ||||  ||||||||||||||||||||||||    
T  7543054 tgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgttacttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 28586127 - 28586031
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| |||||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||   | ||||||| | ||||||||||||    
T  28586127 aagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttcaacaaaacaatccacgttacttattt 28586031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 710 - 781
Target Start/End: Original strand, 24475227 - 24475298
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||| |||||||| |||||    
T  24475227 ttacctgttttggttgcagaaaagtaagtagtggttaggattcttcgaatctcccctgtttatattgttgga 24475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 635
Target Start/End: Original strand, 24251518 - 24251611
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    ||||||| ||| | ||||||||||| ||||||| ||||| |||| |||  ||||||| || ||||||| |||||||||||||||||||||||||    
T  24251518 aagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 21932149 - 21932102
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatc 589  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21932149 aagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatc 21932102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 606 - 691
Target Start/End: Complemental strand, 20002423 - 20002338
Alignment:
Q  606 tcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttat 691  Q
    |||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| || ||| |||||| ||||||||||| |||||    
T  20002423 tcgttttgtccaaataatccgcgttacttattttaagtttgacgataaaataaaa-agataagggttaagagatttgcaatatttat 20002338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 9899056 - 9898959
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagt-gataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||||||||| |||||||  | |||||||||||  |||||||  ||||||| |||| || ||||| |||| ||||||||||||    
T  9899056 aagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccattcacgttacttattt 9898959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 581 - 638
Target Start/End: Complemental strand, 24252287 - 24252230
Alignment:
Q  581 tagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttattt 24252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 630
Target Start/End: Original strand, 2586723 - 2586810
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtt 630  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||   ||||| |  ||||||||||| ||||||| ||||||||||    
T  2586723 aagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat-gcatccaaaatgattgtcgtttcgtccaaaaaattcgcgtt 2586810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 781
Target Start/End: Complemental strand, 14079378 - 14079314
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||  |||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  14079378 ttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatattgttgga 14079314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 525 - 589
Target Start/End: Complemental strand, 14079558 - 14079494
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatc 589  Q
    ||||||| | ||| || ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  14079558 tgatgtgcgaattaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatc 14079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 528 - 588
Target Start/End: Complemental strand, 20145171 - 20145111
Alignment:
Q  528 tgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtat 588  Q
    |||| ||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  20145171 tgtgaggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 20145111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 528 - 588
Target Start/End: Original strand, 22187668 - 22187728
Alignment:
Q  528 tgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtat 588  Q
    |||| ||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  22187668 tgtgaggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 22187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 768
Target Start/End: Complemental strand, 24657396 - 24657338
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctat 768  Q
    |||||||||||||||  |||||||||||||| |||||| ||||||||||||||| ||||    
T  24657396 ttacctgttttggttgcagaaaagtaagcagcggttagaattcttcgaatcccctctat 24657338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 9385957 - 9386025
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||  | |||||||||||||||||||||    
T  9385957 aagtgtaccaaattggttaccaagtaataaagtg-caagtagagtcgcgtatccacatggattgtcgttt 9386025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 22413126 - 22413050
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||||| |||||||||||||| |||| |||||||||||  ||| |||| ||||||||  |||||||||||    
T  22413126 caagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttattt 22413050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 545 - 607
Target Start/End: Complemental strand, 20722269 - 20722209
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    |||||||||| ||||||||||| |||||||  |||||||||||| ||||||||| ||||||||    
T  20722269 tgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccacaaggattgtc 20722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 25781916 - 25782002
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||  |||| ||||   |||||| ||||||||  |||||||||| |||| |||||||||||||||||||||    
T  25781916 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgcagaaaagtaaacagtagttaggattcttcgaatcccc 25782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 542 - 629
Target Start/End: Complemental strand, 28589527 - 28589440
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgt 629  Q
    ||||||||||||| ||||| ||| | | ||||||||||||| |||||| || ||||||||||| ||||||   ||||| |||||||||    
T  28589527 aagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttcaaccaaaaaattcgcgt 28589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 635
Target Start/End: Complemental strand, 17883878 - 17883789
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    |||||||||| ||||||||||| |||| ||| | ||||||| |||  ||| ||| |||||||| ||| |||||||||||||| ||||||||    
T  17883878 tgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttactta 17883789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 622
Target Start/End: Original strand, 19244601 - 19244667
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    ||||||||||| ||||||||||||||||||||||  ||| | |  ||||||||||| ||||||||||    
T  19244601 gtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 760
Target Start/End: Original strand, 1635131 - 1635183
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatc 760  Q
    |||||| ||||||||||  |||||||||| ||| |||||||||||||||||||    
T  1635131 agttacatgttttggttgtagaaaagtaaacagcggttaggattcttcgaatc 1635183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 717 - 781
Target Start/End: Original strand, 14637047 - 14637110
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||  |||||||||||||| |  ||||||||||||||| ||||||||||||||| |||||    
T  14637047 ttttggttgcagaaaagtaagcagcgaataggattcttcgaat-ccccctatttatattgttgga 14637110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 24657532 - 24657456
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||| |||||||| ||||||| |||||||| |||||||  ||| |||| ||||||||  |||||||||||    
T  24657532 caagtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttattt 24657456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 691
Target Start/End: Complemental strand, 6630773 - 6630640
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgac--gataa 653  Q
    ||||||||||| ||||  | ||||||||||||||  |||||||| ||||||||||| ||| ||||   | ||||||||||||| ||  |||||   ||||    
T  6630773 gtttaccaagtaataa--taataagtagagtatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattt-taagttgacaatataa 6630677  T
Q  654 aataaaagagttaaaggttaaagatttgcaatttttat 691  Q
    |||||||||  ||||||||| ||| |||||||||||||    
T  6630676 aataaaagatataaaggttagaga-ttgcaatttttat 6630640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 612
Target Start/End: Original strand, 17382150 - 17382217
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtttt 612  Q
    ||||| |||| |||||||||   |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  17382150 tgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgtttt 17382217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 605
Target Start/End: Original strand, 34478532 - 34478589
Alignment:
Q  547 taccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattg 605  Q
    |||||||| ||||||||| | |||||||| ||||||||||||| |||||||| ||||||    
T  34478532 taccaaatcgtttaccaaataataaagtg-taagtagagtatcgtatccacaaggattg 34478589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 765
Target Start/End: Original strand, 19244743 - 19244800
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccc 765  Q
    ||||||||| |||||||  ||||||||||| |||||| ||||||||| |||| |||||    
T  19244743 agttacctggtttggttgtagaaaagtaagtagtggtaaggattctttgaatgccccc 19244800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 21841785 - 21841689
Alignment:
Q  542 aagtgtaccaaattgttt-accaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| |||||||| | ||||| |||||| |||||||||||| |   |||||||||||||||| ||| |||| |||| |||  |||||||||||    
T  21841785 aagtgtacc-aattgtttcatcaagtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttattt 21841689  T

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Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 759
Target Start/End: Complemental strand, 22412989 - 22412940
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaat 759  Q
    |||||||||||||||  || |||||||| || ||||||||||||||||||    
T  22412989 ttacctgttttggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

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Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 638
Target Start/End: Complemental strand, 23009464 - 23009396
Alignment:
Q  569 taaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||| ||| |||||||| |||||||| |||  |||||| |||||  |||||||||||    
T  23009464 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttattt 23009396  T

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Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 638
Target Start/End: Original strand, 23778900 - 23778968
Alignment:
Q  569 taaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||| ||| |||||||| |||||||| |||  |||||| |||||  |||||||||||    
T  23778900 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttattt 23778968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 556 - 772
Target Start/End: Original strand, 35553 - 35771
Alignment:
Q  556 gtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaa 655  Q
    ||||| ||||| |||||||||||| ||||||||  |||||||||||||| |||||| ||||||||||||||| ||||||||||  ||||||| |||||||    
T  35553 gtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatgataaaa 35652  T
Q  656 taaaagagttaaa-ggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattct 753  Q
    ||||||||||||| ||||| ||||||||||||||||| | | |  |||| ||| |||||||||||||||||  ||||| |||||||| ||||| ||||||    
T  35653 taaaagagttaaagggttagagatttgcaatttttatttgtctgcaacaaagcaagttacctgttttggttgcagaaaggtaagcagcggttaagattct 35752  T
Q  754 tcgaatcccccctatttat 772  Q
    || |||||||  |||||||    
T  35753 tcaaatcccctatatttat 35771  T

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Target: chr5 (Bit Score: 92; Significance: 3e-44; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 531 - 764
Target Start/End: Original strand, 15690769 - 15691001
Alignment:
Q  531 gtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtt 630  Q
    ||||||| || |||| |||||||| ||||||||| | |||||||||||||||||||||| |||||||  | |||||||||| |||||| |||||| ||||    
T  15690769 gtggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgtt 15690867  T
Q  631 acttatttatagtttgacgataaaataaaagagttaaa-ggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaag 728  Q
    |||||||| ||| ||||| |  |||||||||||||||| ||||| ||||||||||||||||| | ||   |||| ||| | |||||||||||||||  ||    
T  15690868 acttatttttag-ttgacaaataaataaaagagttaaagggttagagatttgcaatttttatttgttcgtaacagagcaaattacctgttttggttgcag 15690966  T
Q  729 aaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15690967 aaaagtaagcagt-gttaggattcttcgaatccccc 15691001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 542 - 693
Target Start/End: Complemental strand, 25402434 - 25402283
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||||  |||||||| |||||||||||| |||| ||  |||||||||||||||||  |    
T  25402434 aagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttattttaa 25402335  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    ||||||| ||||||||||||||| || ||||| |||||||||||||||||||    
T  25402334 gtttgacaataaaataaaagagtgaagggttagagatttgcaatttttatct 25402283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 22755523 - 22755763
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||| ||| ||||||||||| || ||| ||||||||||||||| |||||| | ||||||||||||  ||||||||||| || ||| |||||| ||    
T  22755523 aagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattatttattt-ta 22755621  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
    |||| |||  |||||||||||||||||| ||||| |||||| |||||||||||| |||  |||| ||| ||||||  |||||||||  | |||||||| |    
T  22755622 gttttacgatataaaataaaagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagttactagttttggttccaaaaaagtaatc 22755721  T
Q  739 agtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |  | ||| ||||||| |||| |||||||||||| ||||||||    
T  22755722 aacgattatgattcttagaattccccctatttat-ttcttgga 22755763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 772
Target Start/End: Complemental strand, 24267051 - 24266824
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||| || |||||||||||||||||| ||||||||||| |     
T  24267051 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattt-tg 24266954  T
Q  642 gtttgacgat---aaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcagttacctgttttggtttaagaaaagtaagc 738  Q
     |||||||||   | |||||||||||||| ||||| | | ||||||||||||||| |||  |||| ||||   ||||| |||||||  || |||||||||    
T  24266953 ttttgacgatataataataaaagagttaagggttagata-ttgcaatttttatctgtttgtaacaaagca-agacctg-tttggttacag-aaagtaagc 24266858  T
Q  739 agtggttaggattcttcgaatcccccctatttat 772  Q
    || |||||||| ||||||||||| ||||||||||    
T  24266857 agcggttaggactcttcgaatcctccctatttat 24266824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 772
Target Start/End: Complemental strand, 24343682 - 24343455
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||| || |||||||||||||||||| ||||||||||| |     
T  24343682 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattt-tg 24343585  T
Q  642 gtttgacgat---aaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcagttacctgttttggtttaagaaaagtaagc 738  Q
     |||||||||   | |||||||||||||| ||||| | | ||||||||||||||| |||  |||| ||||   ||||| |||||||  || |||||||||    
T  24343584 ttttgacgatataataataaaagagttaagggttagata-ttgcaatttttatctgtttgtaacaaagca-agacctg-tttggttacag-aaagtaagc 24343489  T
Q  739 agtggttaggattcttcgaatcccccctatttat 772  Q
    || |||||||| ||||||||||| ||||||||||    
T  24343488 agcggttaggactcttcgaatcctccctatttat 24343455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 540 - 638
Target Start/End: Original strand, 34487638 - 34487735
Alignment:
Q  540 gaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  34487638 gaaagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattt 34487735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 542 - 693
Target Start/End: Complemental strand, 19004323 - 19004174
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    |||||||| |||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |     
T  19004323 aagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttg 19004224  T
Q  641 --agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
      |||||||||||   ||||||||  ||| ||||||| | |||||||||||||||    
T  19004223 taagtttgacgat---ataaaaga--taagggttaaatagttgcaatttttatct 19004174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 25550601 - 25550505
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||  |||||||||||    
T  25550601 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttacttattt 25550505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 539 - 769
Target Start/End: Original strand, 26120864 - 26121093
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||||||||||| || |||||||  ||||||||||||||||| || | |||||||||||| |||||||||||| || ||||||||||    
T  26120864 ggaaagtgtaccaaattgtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttattt 26120962  T
Q  639 at-agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaagaaaagtaa 736  Q
     | |     |  |||||||||||||||| | ||||| | ||||  ||||||||||| |||  | |||||  || |||||||||| |||  ||||| ||||    
T  26120963 ttgaacaataaaataaaataaaagagttgagggttagatattt-taatttttatctgtttgcagcatagaaagatacctgtttt-gttgcagaaatgtaa 26121060  T
Q  737 gcagtggttaggattcttcgaatcccccctatt 769  Q
    ||||||||||| |||||||||||| ||||||||    
T  26121061 gcagtggttagaattcttcgaatcacccctatt 26121093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 39434465 - 39434560
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||||||||||| ||||| |||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39434465 aagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattt 39434560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 533 - 693
Target Start/End: Complemental strand, 18208354 - 18208195
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| |||||| |||| |||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||  |||||    
T  18208354 ggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttac 18208256  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    |||||| |  ||||| |  |||||||||||||||||| ||||  ||  |||||||||||||||    
T  18208255 ttattt-tgttttgatgatataaaataaaagagttaagggttggag-gttgcaatttttatct 18208195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 542 - 637
Target Start/End: Complemental strand, 19086276 - 19086181
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatt 637  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||| || ||||||  ||||||||||    
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgttacttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 608 - 775
Target Start/End: Complemental strand, 20744699 - 20744532
Alignment:
Q  608 gttttgtccaaacaattcgcgttacttatttat---agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacat 704  Q
    |||| ||||||||| ||| |||||||||||| |   |||||||||||   |||||  |||||| ||||| ||| ||||||||||||||| |||  |||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgat---ataaa--agttaagggttagagagttgcaatttttatctgtttgcaacat 20744605  T
Q  705 agca--gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    ||||   |||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  20744604 agcaagtttacctgttttggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatatt 20744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 772
Target Start/End: Original strand, 36175136 - 36175366
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||||| |||||||| |  |||||||||| |||||| | |||||||||||| ||||||||||   ||||||||||||| |     
T  36175136 aagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttatttttg 36175234  T
Q  641 -agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
     |   | |  || ||||||||||||| | ||||| ||| ||||||||||||||| |||  |||| ||| |||||||||||||||||  |||||||||||     
T  36175235 aacaattaaaat-aaataaaagagttgagggttagaga-ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaaga 36175332  T
Q  739 agtggttaggattcttcgaatcccccctatttat 772  Q
    || ||||| ||||||| ||||| | |||||||||    
T  36175333 agcggttatgattctttgaatctctcctatttat 36175366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 17171659 - 17171554
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||  |||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||| ||| || ||||||||||||     
T  17171659 ggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaa 17171560  T
Q  633 ttattt 638  Q
    ||||||    
T  17171559 ttattt 17171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 15375979 - 15375883
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||||||| |||||||| |||||||||||| ||||||| |||| || ||||||||||    
T  15375979 aagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttattt 15375883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 20315526 - 20315431
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||||||||||| |||| ||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||| ||||||||    
T  20315526 aagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattt 20315431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 23388934 - 23388839
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||  |||||||||||    
T  23388934 aagtgtaccaa-ttgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattt 23388839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 558 - 638
Target Start/End: Complemental strand, 24245625 - 24245545
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| || |||||||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||||||    
T  24245625 ttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattt 24245545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 15469929 - 15470034
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||| || ||||||| |||||||||| |||||||||| ||| ||||||||| || ||     
T  15469929 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaattcacgctat 15470028  T
Q  633 ttattt 638  Q
    ||||||    
T  15470029 ttattt 15470034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 17431885 - 17432125
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||| |||| ||||||||||| ||||||||  |||||||||||| ||||||||  |||||||||||  ||||||||| || || ||||||||| ||    
T  17431885 aagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattttta 17431984  T
Q  642 ----gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagta 735  Q
         |||| ||||   |||||| |  ||| ||||||||| ||| ||||||| ||| |||  |||| ||||   |||| ||||||||||  |||||||||    
T  17431985 taagttttggcgat---ataaaata--taagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttgttttggttgcagaaaagta 17432079  T
Q  736 agcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||| |||||||||||||||||| |||  | |||||||| |||||    
T  17432080 agcagcggttaggattcttcgaataccctatgtttatattgttgga 17432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 24140445 - 24140540
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||  |||||||  |||||||| ||| |||||||||||||||||||| |||||    
T  24140445 aagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattt 24140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 533 - 768
Target Start/End: Complemental strand, 19283961 - 19283726
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| |||||||| || |||| ||||||||| | |||||||||||||||||||||  |||||||| | |||  ||||| |||||||||||| || | ||    
T  19283961 ggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaac 19283862  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaaga 729  Q
    |||||| ||  ||||||  ||||| |||||||||||| ||||| ||| || ||||||| ||||||||  || | ||  ||||||||| |||||||  |||    
T  19283861 ttattt-taagttgacgatataaagtaaaagagttaagggttagaga-ttacaattttaatctatttgcaatagagaaagttacctg-tttggttgtaga 19283765  T
Q  730 aaagtaagcagtggttaggattcttcgaatcccccctat 768  Q
    ||| ||||||| ||||| || | ||| ||||||||||||    
T  19283764 aaattaagcagcggttaagacttttcaaatcccccctat 19283726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 24852279 - 24852173
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || |||| ||| |||| | ||||||||| ||||| ||||||||| |||||| |||||||||||||||| |||| ||| ||||||||| |||||    
T  24852279 tggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgtta 24852180  T
Q  632 cttattt 638  Q
    |||||||    
T  24852179 cttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 769
Target Start/End: Original strand, 18937741 - 18937979
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| |||||  |||| ||||||||||||||| |||||| ||| || | ||||||| |||| ||||||||||||| ||||||    
T  18937741 ggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaattcacgttac 18937839  T
Q  633 ttatttatagtt--tgacgataaaataaaagagttaaaggtt-aaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaa 727  Q
    ||||||  ||||  |||  ||||||| |||||||||| |||| | |||||| |||||||||||| |||  |||| ||| |||||| || ||||||||  |    
T  18937840 ttattttaagttaatga-tataaaat-aaagagttaagggttgagagattt-caatttttatctgtttgcaacagagcaagttacatgtttttggttgca 18937936  T
Q  728 gaaaagtaagcagtggtt--aggattcttcgaatcccccctatt 769  Q
    |||| |||| ||||||||  ||||||||| ||||||||||||||    
T  18937937 gaaatgtaa-cagtggttagaggattctttgaatcccccctatt 18937979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 17185465 - 17185561
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||  |||||||| | |||||||||||||||||||||| |||| ||| ||||||||||||   ||||||||||| |||||| |||||    
T  17185465 aagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgtattt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 584 - 769
Target Start/End: Original strand, 24260560 - 24260746
Alignment:
Q  584 agtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaataa----aagagttaaaggttaaagatt 679  Q
    |||||| |||||||| |||||||| ||| ||||||| ||| ||||||||||||||    || ||| |||||||||    ||||||| | ||||| |||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttattt----ttggacaataaaataatcaaaagagttgagggttagagatt 24260655  T
Q  680 tgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatt 769  Q
    |||||||||||||| |||  |||| ||| |||||||| ||||||||  ||||| || || || ||||| ||||| | |||||||| |||||    
T  24260656 tgcaatttttatctgtttgcaacagagcaagttacctattttggttgcagaaatgttaggagcggttatgattccttgaatcccctctatt 24260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 533 - 623
Target Start/End: Complemental strand, 24167690 - 24167600
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    ||||| || |||||||  |||| ||||||||||| |||||||  |||||||||||||||||  ||||||||||||||||  ||||||||||    
T  24167690 ggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 17315182 - 17315101
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||||||| |||||| ||||||||||||||||| |||  ||| ||||||||  |||||||||||    
T  17315182 tttatcaagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttattt 17315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 550 - 638
Target Start/End: Original strand, 23265164 - 23265252
Alignment:
Q  550 caaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||  ||||||||||||||||||||| | |||| |||||| ||||||| || |||   ||||||||||| ||||||||||||    
T  23265164 caaattgtttttcaagtgataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttattt 23265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 24656950 - 24656854
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| || |||| |||| | ||||| | |||||||||| |||| ||| ||||||||||| |||| ||| |||||||||| |||||||||||    
T  24656950 aagtgtaccagatagtttcccaattaataaaattataagtagagaatcaaatcaacatggattgttgtttcgtctaaacaattcgtgttacttattt 24656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 34128639 - 34128734
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||| |||| |||||||| | |||||| ||| ||||||| ||||| |||| |||||||    
T  34128639 aagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttattt 34128734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 18018547 - 18018621
Alignment:
Q  345 atatcattttattagtggtttttattcaatttactggagttcatatgagtacacatgtgttagaagctacaaaaa 419  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||| |   ||||| | ||||||||||||||    
T  18018547 atatcattttattagtggtttttgttcaatttagtggagttcatgtgatttttcatgtatcagaagctacaaaaa 18018621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 764
Target Start/End: Original strand, 34128807 - 34128861
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccccc 764  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  34128807 ttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatccccc 34128861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 638
Target Start/End: Original strand, 19051534 - 19051646
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| | |||||||||||||| |||||| |||| |||||||||||||| |||| || ||||| || ||||||| |||   || ||||||||    
T  19051534 tgatgtgcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc-cagggattgttgttccatctaaacaatt 19051632  T
Q  625 cgcgttacttattt 638  Q
    |  |||||||||||    
T  19051633 cttgttacttattt 19051646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 23380354 - 23380289
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | |||| ||| || ||||||||||    
T  23380354 aagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtc 23380289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 717 - 770
Target Start/End: Complemental strand, 26121244 - 26121191
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctattt 770  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||||||||||||    
T  26121244 ttttggttacagaaaagtaagtagtggttaggattctttgaatcccccctattt 26121191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 20858707 - 20858783
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||| |||||||||||||||| |||||||   ||||||| |||||||| ||||||||  |||||||||||    
T  20858707 caagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttattt 20858783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 781
Target Start/End: Complemental strand, 24245471 - 24245401
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||| |||  |||||||||||||  ||||||||||||||||||| ||||| |||||||| |||||    
T  24245471 ttacctgttttagttgcagaaaagtaagcaacggttaggattcttcgaatc-cccctgtttatattgttgga 24245401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 32417452 - 32417391
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggatt 604  Q
    ||||||||||||| ||||| ||||| |||||||| |||||||||||| ||||| |||||||||    
T  32417452 aagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtattatatcgacatggatt 32417391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 20549766 - 20549705
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| |||||||| |||||||| ||| |||| ||||||||  |||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattt 20549705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 638
Target Start/End: Complemental strand, 29263662 - 29263582
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| ||||| |||||| ||||  ||| |||| |||||||||||||||||  |||||||||||  |||||||||||    
T  29263662 tttaccaagtaataaaatgataattagac-atcgtatctacatggattgtcgttttaaccaaacaattcatgttacttattt 29263582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 781
Target Start/End: Complemental strand, 24662198 - 24662034
Alignment:
Q  617 aaacaattcgcgttacttatttatagtttgacgata--aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttac 713  Q
    ||||||||| |||||||||||| |||||| ||||||  ||||||||||||||| |||||  ||||| |||||||||  | ||| ||||| ||| ||||||    
T  24662198 aaacaattcacgttacttattt-tagtttaacgatataaaataaaagagttaagggttagcgattt-caatttttagttgtttgaaacagagcaagttac 24662101  T
Q  714 ctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
     |||||| |||  || |||||||| || ||||| || ||||||| |||||| ||| ||| || |||||    
T  24662100 ttgtttt-gttgcagtaaagtaagtagcggttaagactcttcgattcccccatatatattttgttgga 24662034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 638
Target Start/End: Original strand, 28664796 - 28664872
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| |||||||||||||||||||||| ||| || | ||| |||| ||| || | |||||||| ||||||||||||    
T  28664796 caagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttattt 28664872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 763
Target Start/End: Complemental strand, 17315042 - 17314987
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||||  | |||||||||||| ||||| ||||||| ||||||||    
T  17315042 agttacctgttttggttgcaaaaaagtaagcagcggttaagattctttgaatcccc 17314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 760
Target Start/End: Original strand, 39434626 - 39434676
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatc 760  Q
    |||||||||||| ||  |||||||||||||  |||||||||||||||||||    
T  39434626 ttacctgttttgtttgcagaaaagtaagcaacggttaggattcttcgaatc 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 768
Target Start/End: Complemental strand, 16523713 - 16523672
Alignment:
Q  727 agaaaagtaagcagtggttaggattcttcgaatcccccctat 768  Q
    |||||||||||||| ||||||||||||| |||||||| ||||    
T  16523713 agaaaagtaagcagcggttaggattctttgaatcccctctat 16523672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 579
Target Start/End: Original strand, 20419958 - 20419995
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataa 579  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20419958 aagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 638
Target Start/End: Complemental strand, 20564142 - 20564081
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||||||||  ||| ||||||||  |||  |||||||||||    
T  20564142 taagtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttattt 20564081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 26110567 - 26110463
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||| ||| ||||| ||||| ||||| || |||||||||||| ||||||||| ||||| | ||||  ||||| ||||| | |||||    
T  26110567 ggattaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagggatttttgtttcatccaatcaatttgtgttac 26110469  T
Q  633 ttattt 638  Q
     |||||    
T  26110468 atattt 26110463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 607
Target Start/End: Original strand, 26502137 - 26502185
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    ||||||||| |||||||||||||| |||| || |||||||||||||||||    
T  26502137 ttaccaagtaataaagtgataagt-gagtgtcgtatccacatggattgtc 26502185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 28253286 - 28253350
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    |||||||||| ||||||||||| |||||||| |||||||| |||| ||| |||| ||||| |||||    
T  28253286 tgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagggattatcgtt 28253350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 28664933 - 28664986
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||||  |||||| ||||||  ||||| ||||||||||||||||    
T  28664933 ttacctgttttggttgcagaaaaataagcaacggttaagattcttcgaatcccc 28664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 525 - 781
Target Start/End: Complemental strand, 24114396 - 24114140
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| || |||||||||||| |||||||||| |    
T  24114396 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaact 24114297  T
Q  625 cgcgttactta--tttatagtttgacgataaaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagca--gttacctgttt 719  Q
     ||||||||||  ||| ||  ||||||||   ||||||||  ||| ||||| ||   ||||||||||||||| |||  | || ||||   ||||||||||    
T  24114296 tgcgttacttatttttgtaagttgacgat---ataaaaga--taagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctgttt 24114202  T
Q  720 tggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||| |  ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  24114201 tggtatctgaaaagtaagcagcggttaggattcttcgaatcccccctatttatattgttgga 24114140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 525 - 775
Target Start/End: Complemental strand, 29382475 - 29382224
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    |||||| |||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||    
T  29382475 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatt 29382376  T
Q  625 cgcgttacttatttat---agtttgacgataaaataaaagagttaaaggtta-aagatttgcaatttttatctatttaaaacatagc-agt-tacct-gt 717  Q
     ||||||||||||| |   |||||||||||   |||||  |||||| ||||| ||   ||||||||||||||| |||  |||||||| ||| |||||  |    
T  29382375 tgcgttacttatttttgtaagtttgacgat---ataaa--agttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatt 29382281  T
Q  718 tttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    |||||||  ||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  29382280 tttggttgcagaaaagtaagcagtggttaggattcttc-aaacccccctgtttatatt 29382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 525 - 781
Target Start/End: Complemental strand, 13315105 - 13314850
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| |||| |||||||| ||  |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||||||||||    
T  13315105 tgatgtgcggattaggaa-gtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaatt 13315007  T
Q  625 cgcgttactta-tttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc--agttacctg-tttt 720  Q
    ||||||||||| ||||||  ||||||||| |||||||||  |||| |||| ||| ||||||||||||| | |||  |||  | |  | ||||||| ||||    
T  13315006 cgcgttacttattttataagttgacgatataataaaaga--taaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgttttt 13314909  T
Q  721 ggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||  |||||||||||||  ||||| ||||||||||||  |||||||||||||| |||||    
T  13314908 ggttgcagaaaagtaagcaacggttaagattcttcgaat--cccctatttatattgttgga 13314850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 550 - 764
Target Start/End: Original strand, 34497125 - 34497341
Alignment:
Q  550 caaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacg 649  Q
    ||||| ||||||||||| |||||||||| ||||||||||| |||||| |  || |||||||| ||||||||||| | |||||||||||| ||  ||||||    
T  34497125 caaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttacttattt-taaattgacg 34497223  T
Q  650 --ataaaataaaagagttaaa-ggttaaagatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggtt 745  Q
      ||||||||||||||||||| ||||| ||| ||||||||||||||| |||  ||||||||| |||||||| |||| ||  |||||||||||||| ||||    
T  34497224 atataaaataaaagagttaaagggttagaga-ttgcaatttttatctttttgcaacatagcatgttacctggtttgcttgcagaaaagtaagcagcggtt 34497322  T
Q  746 aggattcttcgaatccccc 764  Q
    ||||||| | |||||||||    
T  34497323 aggattccttgaatccccc 34497341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 533 - 745
Target Start/End: Original strand, 14528142 - 14528355
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||| |||||| ||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||| || ||||||    
T  14528142 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttac 14528241  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaaga 729  Q
    |||||| ||   |||||  ||||||||||| |||||| ||||| ||| |||||||||||| || |||  |||| ||| ||||||||| |||||||  |||    
T  14528242 ttattt-taaactgacgatataaaataaaatagttaagggttagaga-ttgcaatttttagctgtttgcaacaaagcaagttacctggtttggttgcaga 14528339  T
Q  730 aaagtaagcagtggtt 745  Q
    ||||||||||| ||||    
T  14528340 aaagtaagcagcggtt 14528355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 24269600 - 24269839
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||| | ||| |||||| |     
T  24269600 aagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttatttttg 24269698  T
Q  641 --agtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagcag-ttacctg-ttttggtttaagaaaagt 734  Q
      |||||||||  |||||| | ||||||      || || | ||||||| ||||||| |||  |||| || || ||||||| ||||||||  ||||||||    
T  24269699 taagtttgacggtataaaaaataagagt------ttgaatagttgcaatctttatctgtttgcaacagagtagtttacctgtttttggttgcagaaaagt 24269792  T
Q  735 aagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||    
T  24269793 aagcagcggttaggattcttcgaatcccccctgtttatattgttgga 24269839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 542 - 771
Target Start/End: Complemental strand, 25182525 - 25182294
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||| |||||||| |||||||| | ||||||||| |||||||||||| ||| ||||||||||||| ||| ||| ||||   | ||||||||||||| ||    
T  25182525 aagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgttacttattt-ta 25182427  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaag 737  Q
      ||||||  |||||||||||||| ||| ||||| ||| |||||||||||||||||||  |||| ||| ||||||||| ||||||||  ||||||| ||     
T  25182426 agttgacgatataaaataaaagagataagggttagaga-ttgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaaggaaa 25182328  T
Q  738 cagtggttaggattcttcgaatcccccctattta 771  Q
    |||||||||||| |||| ||||||||| ||||||    
T  25182327 cagtggttaggactctttgaatcccccatattta 25182294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 533 - 693
Target Start/End: Original strand, 6884951 - 6885110
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||| |||| || |||| ||| |||||||||||||| ||||||| |||| |||||||||||||||| |||||||||| | ||| |||    
T  6884951 ggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctac 6885049  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaagg-ttaaagatttgcaatttttatct 693  Q
    ||||||  |||||||||||||||| |||||| ||| || ||| |||||||||||||||||||    
T  6885050 ttattttaagtttgacgataaaat-aaagagataagggtttagagatttgcaatttttatct 6885110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 533 - 693
Target Start/End: Complemental strand, 30806603 - 30806438
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatcca-----catggattgtcgttttgtccaaacaattcgc 627  Q
    ||||| || ||||||| ||||| |||||  |||| |||||||||||||||||||||| ||||||     || ||||||||||||  ||||||||||| ||    
T  30806603 ggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgc 30806504  T
Q  628 gttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||||| ||| |||||||||||||||    
T  30806503 gttacttattt-tagtttgacgatataaaataaaagagttaagggttagaga-ttgcaatttttatct 30806438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 545 - 638
Target Start/End: Original strand, 2637603 - 2637696
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||| || ||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttattt 2637696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 30122260 - 30122156
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||   || |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30122260 ggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattac 30122162  T
Q  633 ttattt 638  Q
    ||||||    
T  30122161 ttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 542 - 637
Target Start/End: Original strand, 15238801 - 15238896
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatt 637  Q
    ||||||| ||||||||||||||||| | ||| ||||||||||| |||| |||||||||| |||||||||| ||| |||||||||||||||||||||    
T  15238801 aagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 5850943 - 5851039
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||   ||||||||| || |||||||||||    
T  5850943 aagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 24904635 - 24904731
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||||||| | |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||| | ||||||||||    
T  24904635 aagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttattt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 578 - 781
Target Start/End: Original strand, 13697893 - 13698095
Alignment:
Q  578 aagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaa 675  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||||   ||||||||||||| ||  ||||||  |||||||| ||||| ||| ||||| |    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattt-taagttgacgatataaaatacaagagataagggttaga 13697991  T
Q  676 gatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatat 774  Q
    || ||||||||||||||| |||  |||| ||| ||||||||| |||||||  |||||||||||||||| ||| || |||| |||| |||||||||||| |    
T  13697992 ga-ttgcaatttttatctctttgcaacagagcaagttacctg-tttggttgcagaaaagtaagcagtgattatgactctttgaat-ccccctatttattt 13698088  T
Q  775 tcttgga 781  Q
    | |||||    
T  13698089 tgttgga 13698095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 542 - 764
Target Start/End: Original strand, 24644840 - 24645066
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||| ||||||| |||||||||| |||||||| ||||||||||||  |||||||||||||| ||||||| |||||| ||||||| |||||||||  |     
T  24644840 aagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttatt--tg 24644936  T
Q  642 gtttgacga---taaaataaaagagttaaaggttaaagatttgcaa--tttttatctatttaaaacatagc--agttacctg-ttttggtttaagaaaag 733  Q
    |||| || |   ||||||||||||||  |||| || ||| ||||||  |||||||||||||  |||||| |  ||||||||| ||||||||  |||||||    
T  24644937 gtttaacaaaattaaaataaaagagtcgaaggatagaga-ttgcaatttttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaag 24645035  T
Q  734 taagcagtggttaggattcttcgaatccccc 764  Q
    ||||||||  | |||| |||| |||||||||    
T  24645036 taagcagttttaaggaatctttgaatccccc 24645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 560 - 638
Target Start/End: Original strand, 17509266 - 17509344
Alignment:
Q  560 accaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  17509266 accaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttattt 17509344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 771
Target Start/End: Original strand, 19786733 - 19786964
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||| |||||||| ||||||||||| ||||||||| ||||| ||||||||||||| | ||| |||||||| |||||||||| ||| ||||||| |||  |    
T  19786733 aagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgttacttgttttaa 19786832  T
Q  642 gtt--tgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaag 737  Q
    |||  |||  |||||||||||||| |||| |||| ||| ||| ||||||||||| |||  |||| ||| |||||| || ||||| ||  ||||||| ||     
T  19786833 gttgatga-tataaaataaaagagataaaagttagaga-ttgtaatttttatctgtttgcaacagagcaagttacatgtttttgattgtagaaaaggaaa 19786930  T
Q  738 cagtggttaggattcttcgaatcccccctattta 771  Q
    || ||||||||| |||| |||| |||| ||||||    
T  19786931 caatggttaggactctttgaattccccttattta 19786964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 539 - 636
Target Start/End: Complemental strand, 17101993 - 17101896
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttat 636  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||  ||||||||||  | |||||||||    
T  17101993 ggaaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttat 17101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 539 - 639
Target Start/End: Original strand, 14075593 - 14075693
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| ||||||||||  |||||||||| | ||||||||||||||| |||| |||||||||||||||||||||   |||||||||  |||||||||||||    
T  14075593 ggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T
Q  639 a 639  Q
    |    
T  14075693 a 14075693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 781
Target Start/End: Complemental strand, 18448641 - 18448398
Alignment:
Q  540 gaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--tt 637  Q
    |||||||||||||||  |||||||||| ||||||| |||| ||||| ||| |||| | |  ||||||||||||||||||||||||| |||||||||  ||    
T  18448641 gaaagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttatttt 18448542  T
Q  638 tatagtttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaag 733  Q
    ||||  ||||||||   |||||||| | || ||||  ||||  ||||| ||||||||| |||  |||| ||| ||||||||| ||||||||  | |||||    
T  18448541 tataagttgacgat---ataaaaga-taaatggttagaaagtcttgcagtttttatctgtttgcaacagagcaagttacctgtttttggttgcataaaag 18448446  T
Q  734 taagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||  ||||| ||||||| | ||||| ||||| |||||| |||||    
T  18448445 taagcaacggttatgattctttgtatccctcctatatatattgttgga 18448398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 720
Target Start/End: Complemental strand, 28276863 - 28276677
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||| ||||| ||||||||| | | |||||||||||| ||||||| |||||| | ||||| | |||||||||||| || ||   ||||    
T  28276863 ggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttttgtccaaataactcctcttac 28276765  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    ||||||  |||| ||| |||||||||| ||| ||| | |||| ||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  28276764 ttatttgaagtt-gacaataaaataaa-gagataaggattaagagatttgcaatttttatctatttaaaacagagcaagttacttgtttt 28276677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 558 - 693
Target Start/End: Original strand, 21314641 - 21314775
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaata 657  Q
    ||||||||| |||||||||||||||| ||||| |||| ||| ||||| |||||| || |||||||| | |||||||||||| ||| ||  | ||| ||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttatttttag-ttaccaatataata 21314739  T
Q  658 aaagagttaaaggttaaagatttgcaatttttatct 693  Q
     ||||||||||||||| |  |||||||| |||||||    
T  21314740 gaagagttaaaggttagaagtttgcaatatttatct 21314775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcg 608  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 546 - 638
Target Start/End: Complemental strand, 44011116 - 44011025
Alignment:
Q  546 gtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||  |||| |||||| |||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatattt 44011025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 714 - 781
Target Start/End: Complemental strand, 24110593 - 24110526
Alignment:
Q  714 ctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||||||  |||||||||||||| |||||||||| |||||||||||||| |||||||| |||||    
T  24110593 ctgttttggttgcagaaaagtaagcaggggttaggattattcgaatcccccctgtttatattgttgga 24110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 27659468 - 27659543
Alignment:
Q  563 aagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| |||||||||||||||||||||| |||| ||| |||||||||||| ||||||||| | || |||||||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttattt 27659543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 17976612 - 17976717
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||| ||||||  |||| ||||| |||||||||||||||||||||| ||||||||  |||| |||||| ||| | ||| ||||| ||||    
T  17976612 ggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattac 17976711  T
Q  633 ttattt 638  Q
    ||||||    
T  17976712 ttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 622
Target Start/End: Complemental strand, 24110769 - 24110672
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    ||||||| |||||  | ||||||| |||||  |||||||||| ||||| |||||||||||||||| ||||||||  |||| || ||||||||||||||    
T  24110769 tgatgtgcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaacaa 24110672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 710 - 775
Target Start/End: Complemental strand, 26394626 - 26394562
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  26394626 ttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatc-cccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 562 - 638
Target Start/End: Complemental strand, 23893278 - 23893202
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||| || |||||||||||||||||||||||| |||| ||||||  |||||||| ||||||||  |||||||||||    
T  23893278 caagtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttattt 23893202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 637
Target Start/End: Original strand, 31288357 - 31288454
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatt 637  Q
    |||||||||||||||| ||||||||||| |||||||| |||||| |||||| |||||| | |||||||| |||   |||||  |||||||||| |||||    
T  31288357 ggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttcaaccaaatcattcgcgttaattatt 31288454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 610
Target Start/End: Complemental strand, 24119865 - 24119798
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||||  |||||||||||||| |||||    
T  24119865 aagtgtgccaaatcgtttaccaagttataaagtg-taagtagagtattgtatccacatggattttcgtt 24119798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 25226138 - 25226234
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| |||| ||||| ||||| |||||||||||||| ||||||| |||  ||| ||||| | ||||  ||||||||||| ||||||| |||||    
T  25226138 aagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatattt 25226234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 16403952 - 16404010
Alignment:
Q  580 gtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| ||||||||||||||||| ||| |||| ||||||||  |||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattt 16404010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 588
Target Start/End: Original strand, 26008025 - 26008071
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtat 588  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||    
T  26008025 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtat 26008071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 772
Target Start/End: Complemental strand, 30122114 - 30122020
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    ||||||||||||||| |||  |||| || | ||||||| ||||||||  ||||||||||||||||||||  | |||| |||| ||||||||||||    
T  30122114 ttgcaatttttatctgtttgtaacagagtaagttacctattttggttgcagaaaagtaagcagtggttataactctttgaattccccctatttat 30122020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 606
Target Start/End: Original strand, 14006112 - 14006161
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgt 606  Q
    |||||||||| ||||| |||||||||||||||||||| |||||| |||||    
T  14006112 tttaccaagtaataaaatgataagtagagtatcatattcacatgaattgt 14006161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 5053018 - 5052923
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| |||||||  || |||||||| ||||||||||||  |||||||||| ||| | |||  ||| ||||||||| || |||||||||    
T  5053018 aagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccacatgaatt-ttgttgcgtctaaacaattcacgctacttattt 5052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 679 - 781
Target Start/End: Original strand, 7983720 - 7983822
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattct 777  Q
    ||||||||||||||| |||   |||||||| ||| |||| |||||||  |||||||||||||  || |||||||||| |||| |||||||||||| || |    
T  7983720 ttgcaatttttatctgtttgcgacatagcaagttgcctggtttggttgcagaaaagtaagcaacgggtaggattctttgaat-ccccctatttattttgt 7983818  T
Q  778 tgga 781  Q
    ||||    
T  7983819 tgga 7983822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 638
Target Start/End: Original strand, 9641932 - 9641975
Alignment:
Q  595 cacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  9641932 cacatggattgtcgttttgtccaaacaactcggattacttattt 9641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 679 - 762
Target Start/End: Complemental strand, 23893174 - 23893089
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccc 762  Q
    ||||||||||||||| |||  |||| ||||   |||||||||||||||  ||||||||||  ||| |||||||||||| |||||||    
T  23893174 ttgcaatttttatctgtttgcaacaaagcaaatttacctgttttggttgcagaaaagtaactagtagttaggattctttgaatccc 23893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 611
Target Start/End: Original strand, 28317431 - 28317484
Alignment:
Q  557 tttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||||||| |||||||| |||||||||||||||||| ||||| ||||| ||||    
T  28317431 tttaccaagtaataaagtg-taagtagagtatcatatcaacatgtattgttgttt 28317484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 582
Target Start/End: Original strand, 30235369 - 30235419
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagta 582  Q
    |||||| || |||||||| |||| ||||||||||| |||||||||||||||    
T  30235369 tggattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 763
Target Start/End: Original strand, 16404072 - 16404125
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||| |||||| |  |||||| ||||||| ||||||||||||||||||||||    
T  16404072 ttacctattttggctgcagaaaaataagcagcggttaggattcttcgaatcccc 16404125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 611
Target Start/End: Complemental strand, 26615323 - 26615270
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    ||||||| | |||||||||||||||||||||  |||||| ||| ||||||||||    
T  26615323 ttaccaactaataaagtgataagtagagtattgtatccatatgaattgtcgttt 26615270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 1e-43; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 533 - 751
Target Start/End: Original strand, 17671995 - 17672214
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||| |||| ||| |||||| |||||||||    
T  17671995 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttac 17672094  T
Q  633 ttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaaga 729  Q
    |||||| ||  || |||  |||||||||||||||||||||||| ||| ||||||||||||||| |||  |||| ||| ||||||||| |||||||  |||    
T  17672095 ttattt-taagttaacgatataaaataaaagagttaaaggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctggtttggttgcaga 17672192  T
Q  730 aaagtaagcagtggttaggatt 751  Q
    |||||||| ||  |||||||||    
T  17672193 aaagtaagaagcagttaggatt 17672214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 558 - 775
Target Start/End: Complemental strand, 17337216 - 17336997
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaata 657  Q
    ||||| ||| |||| ||||||||||||||||| |||||| |  ||||||| ||| |||||||||||| ||||||||||||| ||| ||||||||| ||||    
T  17337216 ttaccgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttag-ttgacgatataata 17337118  T
Q  658 aaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaagtaagcagtggttaggattctt 754  Q
    ||||||| || ||||  ||||||||||||||||||| |||| |||| ||||   ||||||| ||||||||  | |||||||||||| | ||| |||||||    
T  17337117 aaagagtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattctt 17337018  T
Q  755 cgaatcccccctatttatatt 775  Q
    |||||||||| ||||||||||    
T  17337017 cgaatcccccttatttatatt 17336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 533 - 666
Target Start/End: Original strand, 11490525 - 11490659
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||| ||||  |||||||||||||||||||    
T  11490525 ggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttac 11490624  T
Q  633 ttatttatagtttgacg--ataaaataaaagagtta 666  Q
    |||||| ||||||||||  |||||||||||||||||    
T  11490625 ttattt-tagtttgacgatataaaataaaagagtta 11490659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 524 - 724
Target Start/End: Complemental strand, 12578381 - 12578180
Alignment:
Q  524 gtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaat 623  Q
    |||||||| ||||| || |||||||||||||  |||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  12578381 gtgatgtgaggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaat 12578282  T
Q  624 tcgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    | ||||| ||||||| ||  ||||||  ||||||||||||||| || ||||| ||| || |||||||||||| |||  |||| ||| |||||||||||||    
T  12578281 ttgcgtttcttattt-taagttgacgatataaaataaaagagtaaagggttagaga-ttacaatttttatctgtttgcaacagagcaagttacctgtttt 12578184  T
Q  721 ggtt 724  Q
    ||||    
T  12578183 ggtt 12578180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 13908856 - 13909097
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| ||||||||||| |     
T  13908856 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttttg 13908955  T
Q  641 --agtttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaag 733  Q
      | |||||||||   |||||||   ||||||||  ||||  ||||||||||||||| |||  |||| ||||   ||||||| ||||||||  | |||||    
T  13908956 taattttgacgat---ataaaag---taaaggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaag 13909049  T
Q  734 taagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||| ||||||||||||| ||||||||| | |||||||| |||||    
T  13909050 taagcagcggttaggattctttgaatcccccttgtttatattgttgga 13909097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 19092297 - 19092537
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||  || ||||||||||||||||| |||||||||| || |||| ||||||| ||    
T  19092297 aagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgcttattt-ta 19092395  T
Q  642 gtttgacgata--aaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaagaaaagtaagc 738  Q
      |||||||||  ||||||||||| |||  |||| ||| ||||||||||||||| |||| |||| ||  | |||||||||||||||  ||||||||||      
T  19092396 agttgacgatattaaataaaagagataagagttagaga-ttgcaatttttatctgtttacaacagagtaaattacctgttttggttacagaaaagtaaat 19092494  T
Q  739 agtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    || |||||||| |||| | ||||||| ||||||| || |||||    
T  19092495 agcggttaggactctttgcatcccccatatttattttattgga 19092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 539 - 781
Target Start/End: Original strand, 7582296 - 7582540
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  || ||||||||||    
T  7582296 ggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattt 7582395  T
Q  639 ---atagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaagaaaa 732  Q
         |||||||||||   |||||||| | ||||| | | ||||||||||||| |||| |||  || | | ||   ||||||| ||||||||  ||||||    
T  7582396 tggtaagtttgacgat---ataaaaga-taaaaggcttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaa 7582491  T
Q  733 gtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
     ||||||||||||||||||||| |||||||| || |||||||| |||||    
T  7582492 ataagcagtggttaggattctttgaatcccctctgtttatattgttgga 7582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 13692766 - 13692670
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  13692766 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattt 13692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 525 - 636
Target Start/End: Complemental strand, 13992990 - 13992879
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||  || ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  13992990 tgatgtgcggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T
Q  625 cgcgttacttat 636  Q
    || |||||||||    
T  13992890 cgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 545 - 750
Target Start/End: Original strand, 17216822 - 17217031
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttact--tatttatag 642  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||| ||     
T  17216822 tgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttgtaa 17216921  T
Q  643 tttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaagcag 740  Q
     |||| |||| |||| ||||   || ||||| | | ||||||||||||||| |||  |||| ||||   |||| ||||||||||  |||||||||||||     
T  17216922 gttgatgatataatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatgttttggttgtagaaaagtaagcaa 17217021  T
Q  741 tggttaggat 750  Q
     |||||||||    
T  17217022 cggttaggat 17217031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 5679207 - 5679447
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||||| |||| ||||| | | | |||| |||||||||||||||||||||||||| ||    
T  5679207 aagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttacttattt-ta 5679305  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagc 738  Q
      || |||  |||||||||||||||||| ||||| | | ||||||||||||||| |||  |||| ||| |||||||| ||| | |  || ||||||||||    
T  5679306 agttaacgatataaaataaaagagttaagggttagaca-ttgcaatttttatctgtttgtaacagagcaagttacctatttggttgcaaaaaaagtaagc 5679404  T
Q  739 agtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||   |||||| |||| |||||| |||||||||| || |||||    
T  5679405 agccattaggactctttgaatcctccctatttattttgttgga 5679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 533 - 764
Target Start/End: Complemental strand, 25121331 - 25121100
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| ||||||||| |||||| ||||||||||| |||||||| |||||| |||||| |||||||| ||||||| |||| ||||||||||||||||||||    
T  25121331 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttac 25121233  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaa 730  Q
    ||||||    ||  |  |  ||||||||||||| |  | ||| ||| ||||||||| ||||| |||  |||| ||| ||||||| |||||| ||  ||||    
T  25121232 ttatttggttttaaaaaaataaataaaagagttgagtgataataga-ttgcaatttctatctgtttgcaacagagcaagttacccgttttgattgcagaa 25121134  T
Q  731 aagtaagcagtggttaggattcttcgaatccccc 764  Q
    |||||||||| |||||||||||||||||||||||    
T  25121133 aagtaagcagcggttaggattcttcgaatccccc 25121100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 20315002 - 20315098
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  20315002 aagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 15164769 - 15165009
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttat- 640  Q
    ||||||||||||| ||||||||||| || || | ||||| |||||||| |||||||| |||||||| ||| |||||||||||| ||||||||||||| |     
T  15164769 aagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttttg 15164868  T
Q  641 --agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagtaa 736  Q
      |||||||||||   |||||  |||||| ||||| ||| ||||||||||||| | |||  |||| ||||   |||||||||||||||  ||||||||||    
T  15164869 taagtttgacgat---ataaa--agttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaa 15164963  T
Q  737 gcagtggttaggattcttcgaatccccc-ctatttatattcttgga 781  Q
    |  | ||||||  ||||||||||||||| || |||||||| |||||    
T  15164964 gtggaggttagttttcttcgaatccccctctgtttatattgttgga 15165009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 19882633 - 19882738
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||| |||| ||||| ||||| |||||||||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||||    
T  19882633 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttac 19882732  T
Q  633 ttattt 638  Q
    ||||||    
T  19882733 ttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 19492797 - 19492701
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||| |||||||| | ||||||||||  |||||||||||||||||||||||||    
T  19492797 aagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattt 19492701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 558 - 781
Target Start/End: Complemental strand, 24639535 - 24639318
Alignment:
Q  558 ttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaata 657  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |      | | || ||| ||||||||| ||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg------taacttttag-ttgacgatataata 24639443  T
Q  658 aaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctgtttt-ggtttaagaaaagtaagcagtggttaggattctt 754  Q
    ||| ||| || ||||| ||||||| || |||||| | |||  |||| ||||   ||||||||||| ||||  ||||||||||||||||||||||||||||    
T  24639442 aaatagtaaagggttagagatttgtaa-ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctt 24639344  T
Q  755 cgaatcccccctatttatattcttgga 781  Q
     |||| ||| ||||||||||| |||||    
T  24639343 tgaat-ccctctatttatattgttgga 24639318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 540 - 679
Target Start/End: Complemental strand, 19636684 - 19636546
Alignment:
Q  540 gaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    ||||||||||||||| ||| || |||| |||||||| ||||||||||||  |||| | | ||||||||||||  ||||||||||||  |||||||||||     
T  19636684 gaaagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttatttt 19636586  T
Q  640 tagtttgacgataaaataaaagagttaaaggttaaagatt 679  Q
     ||||||||||||||||||||||||||| ||||| |||||    
T  19636585 aagtttgacgataaaataaaagagttaagggttagagatt 19636546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 542 - 691
Target Start/End: Complemental strand, 13128971 - 13128823
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||  |||||| | |||||||||||| |||||||||| ||||||||||||  |||     
T  13128971 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttatttttt 13128872  T
Q  640 tagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttat 691  Q
    ||| ||||| ||| |||||||||  ||| ||||| ||| |||||||||||||    
T  13128871 tag-ttgaccatataataaaaga--taagggttagagagttgcaatttttat 13128823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 21323981 - 21323876
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||| |||| ||||||||| | |||| ||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  21323981 ggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttac 21323882  T
Q  633 ttattt 638  Q
    ||||||    
T  21323881 ttattt 21323876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 14648897 - 14649136
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||  || ||| |  ||| ||||||||||| ||    
T  14648897 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttacttattt-ta 14648994  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaag 737  Q
      ||||||  |||||||||||||  ||| ||||| |||||| |||||||||||| |||  |||| ||| |||||| || ||||||||  ||||||| ||     
T  14648995 agttgacgatataaaataaaagacataagggttagagattt-caatttttatctgtttgcaacagagcaagttacttgtttttggttgtagaaaaggaaa 14649093  T
Q  738 cagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  |||||||| |||| |||| |||||| |||||||| |||||    
T  14649094 caacggttaggactctttgaat-ccccctgtttatattgttgga 14649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 525 - 693
Target Start/End: Original strand, 40227762 - 40227928
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || ||||||||||||| ||| ||||||| ||||||||||||||  | |||  |||||| | | ||||| ||||  |||||||||||    
T  40227762 tgatgtgaggattaggcaagtgtaccaaatcgtt-accaagtaataaagtgataagttaa-tattgtatccataggaattgtagtttcatccaaacaatt 40227859  T
Q  625 cgcgttacttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    |||||||||||||| |||||||||||||| |||||||||| || || || || ||| ||||||||||||    
T  40227860 cgcgttacttatttttagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatct 40227928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 525 - 763
Target Start/End: Complemental strand, 19562292 - 19562049
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| |||||  | |||||||||||||  |||||||||| ||||||||||||||| |||||| | |||||| | ||||||||||  |||||||||||    
T  19562292 tgatgtgcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatt 19562193  T
Q  625 cgcgttacttatttat--agtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttt 719  Q
     |  |||||||||| |  ||||||||  || |||||||||   || |||||   | ||||||||||||||| |||  |||| ||||   ||||||| |||    
T  19562192 tgtattacttattttttaagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttt 19562093  T
Q  720 tggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||  |||||||||| ||| |||||| |||||||||||||||    
T  19562092 tggttgcagaaaagtaatcagcggttagaattcttcgaatcccc 19562049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 533 - 693
Target Start/End: Complemental strand, 20829844 - 20829685
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||||| | ||||||  |||||||| ||||||| |||| || |||| |||| || ||||    
T  20829844 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattac 20829746  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatct 693  Q
    ||||||  |||| ||||||||||||||| || ||| |||||| |||||| ||||||||||||    
T  20829745 ttattttaagttcgacgataaaataaaa-agataagggttaagagatttacaatttttatct 20829685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 542 - 763
Target Start/End: Original strand, 17709759 - 17709978
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta--ttta 639  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||  |||||| | |||||||  |||||||   ||||||| |||||||||  ||||    
T  17709759 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttattttta 17709855  T
Q  640 tagtttgacgataaaataaaagagttaaaggtt--aaagatttgcaatttttatctatttaaaacatagca--gttacctgttttggtttaagaaaagta 735  Q
    || |||||||||   ||||||||  ||| ||||  ||||| ||| ||||||||| | |||  |||| ||||   |||||||||||||||  | |||||||    
T  17709856 taatttgacgat---ataaaaga--taagggttaaaaagacttgaaatttttatatgtttgcaacagagcaagtttacctgttttggttgcaaaaaagta 17709950  T
Q  736 agcagtggttaggattcttcgaatcccc 763  Q
    || ||  |||||||||||||||||||||    
T  17709951 agtagctgttaggattcttcgaatcccc 17709978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 693
Target Start/End: Complemental strand, 19929772 - 19929621
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||  |||||||||| | |||||||||| ||||||||| ||||||||||||||||||||| ||| ||| |   || ||||||||||| ||    
T  19929772 aagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttattt-ta 19929674  T
Q  642 gtttgac--gataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
      |||||   |||||||||||||| ||| |||||||||||| ||||||||||||    
T  19929673 agttgacaatataaaataaaagagataagggttaaagattt-caatttttatct 19929621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 542 - 659
Target Start/End: Original strand, 11933421 - 11933536
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||| || ||| ||||||||||| || ||||||||||| ||||||| |  |||||||||||||||||| |||||||||| ||||||||||||||| ||    
T  11933421 aagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttattt-ta 11933518  T
Q  642 gtttgacgataaaataaa 659  Q
     ||||| |||||||||||    
T  11933519 atttgatgataaaataaa 11933536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 691
Target Start/End: Complemental strand, 22176059 - 22175911
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||  |||||| |  ||||||| |||| ||||||||||||||| || ||||||  |    
T  22176059 aagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taattattttga 22175961  T
Q  642 gtt--tgacgataaaataaaagagttaaaggttaaagatttgcaatttttat 691  Q
    |||  |||  |||||||||||||||||| ||||| ||| |||||||||||||    
T  22175960 gttgatga-tataaaataaaagagttaagggttagaga-ttgcaatttttat 22175911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 2792597 - 2792466
Alignment:
Q  46 taagtattagtgcaatttggtagtataagaattaaaataataaattggaaattgtatgtttgttttgtgatataagtgtttgatgaaatgcttcaaagaa 145  Q
    |||||||||||| ||| ||||||| |||| ||| |||||||| | || ||||| ||||||| |||| || | || |||||||||||||||||||||  ||    
T  2792597 taagtattagtgtaatgtggtagtttaaggattgaaataatacaatgaaaattatatgtttattttatgctctaggtgtttgatgaaatgcttcaagaaa 2792498  T
Q  146 tgtttaatttatatttttatatcggttgttgt 177  Q
    ||||||||||||||| || ||| |||| ||||    
T  2792497 tgtttaatttatattattttattggttattgt 2792466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 532 - 622
Target Start/End: Original strand, 15047120 - 15047210
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    |||||| ||||||||| |||||| ||||||||||| |||||||||||||||||| ||| |||| ||||||||| |||||| ||| ||||||    
T  15047120 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 532 - 622
Target Start/End: Complemental strand, 15107304 - 15107214
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaa 622  Q
    |||||| ||||||||| |||||| ||||||||||| |||||||||||||||||| ||| |||| ||||||||| |||||| ||| ||||||    
T  15107304 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 44358629 - 44358475
Alignment:
Q  22 ttttactataaatgtagtttaaaataagtattagtgcaatttggtagtataagaattaaaataataaattggaaattgtatgtttgttttgtgatataag 121  Q
    ||||| ||| ||||| | ||||| ||||||||  | |||||||||||| |||||||| |||||| |   |||||||||| || || ||||||| || | |    
T  44358629 ttttaatatgaatgtggcttaaattaagtattgattcaatttggtagtttaagaattgaaataacactatggaaattgtgtgcttattttgtgttacacg 44358530  T
Q  122 tgtttgatgaaatgcttcaaagaatgtttaatttatatttttatatcggttgttg 176  Q
     |||||||||||||||||||| ||| ||||||| |||||||| | ||||||||||    
T  44358529 cgtttgatgaaatgcttcaaataatatttaattgatatttttgtgtcggttgttg 44358475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 639
Target Start/End: Complemental strand, 11521288 - 11521191
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattta 639  Q
    ||||||||||||| ||||| ||| | |||||||||||||||||||||| ||| |||||||||||||||||  || |||| |||| | |||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaactattcacattacttattta 11521191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 764
Target Start/End: Complemental strand, 26116000 - 26115779
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||| ||||| |||| ||| ||| || |||||| |||||| | ||||||||| ||  |||||||||||||  ||||||||||  |    
T  26116000 aagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttattttaa 26115902  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttatctatttaaaacatagca-gttacctgttttggtttaagaaaagtaagca 739  Q
      |  |  |||| ||||||||||| | |||||| ||||||||||||||||||| |||  |||| || | ||||||||||||||||  | ||| || ||||    
T  26115901 aataaa--ataatataaaagagtttagggttaagagatttgcaatttttatctgtttgcaacagagtaagttacctgttttggttgcataaatgttagca 26115804  T
Q  740 gtggttaggattcttcgaatccccc 764  Q
    | |||||||||||||| ||||||||    
T  26115803 gcggttaggattcttcaaatccccc 26115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 745
Target Start/End: Complemental strand, 17951393 - 17951189
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatgga-ttgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    ||||||||||||| |||||||||||  |||||||||||||| |||||| ||||||  |||| ||||||||| ||| ||  |  ||||||||||||||| |    
T  17951393 aagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca-ttggatttgtcgtttcgtctaactagctcgcgttacttattt-t 17951296  T
Q  641 agtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaag 737  Q
    |  ||||||  ||||||||||||||| |  ||||| ||| ||||||||||||||| |||  |||| ||| ||||||||| |||||||  ||||||| |||    
T  17951295 aagttgacgatataaaataaaagagtgacgggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgatttggttgcagaaaagcaag 17951197  T
Q  738 cagtggtt 745  Q
    ||| ||||    
T  17951196 cagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 533 - 637
Target Start/End: Original strand, 3774818 - 3774923
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggat--tgtcgttttgtccaaacaattcgcgtt 630  Q
    ||||| || ||||||| |||||||||||| |||| ||||||||  ||||||||||||||||||||||| ||  ||||||||  |||||||||||| ||||    
T  3774818 ggattaggcaagtgtatcaaattgtttactaagtaataaagtgc-aagtagagtatcatatccacatgaattgtgtcgtttcatccaaacaattcacgtt 3774916  T
Q  631 acttatt 637  Q
    |||||||    
T  3774917 acttatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 533 - 631
Target Start/End: Complemental strand, 9737615 - 9737512
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgat-----aagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgc 627  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||     |||||||||||| |||||||||||||||| |||| ||| |||||||| ||    
T  9737615 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaacaatttgc 9737516  T
Q  628 gtta 631  Q
    ||||    
T  9737515 gtta 9737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 542 - 740
Target Start/End: Complemental strand, 17955245 - 17955046
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatgga-ttgtcgttttgtccaaacaattcgcgttacttatttat 640  Q
    ||||||||||||| |||||||||||  |||||||||||||| |||||| ||||||  |||| ||||||||| ||| ||  |  ||||||||||||||| |    
T  17955245 aagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca-ttggatttgtcgtttcgtctaactagctcgcgttacttattt-t 17955148  T
Q  641 agtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaag 737  Q
    |  ||||||  ||||||||||||||| |  ||||| ||| ||||||||||||||| |||  |||| ||| ||||||||| |||||||  ||||||| |||    
T  17955147 aagttgacgatataaaataaaagagtgatgggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgatttggttgcagaaaagcaag 17955049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 570 - 638
Target Start/End: Complemental strand, 16730468 - 16730400
Alignment:
Q  570 aaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||||||| |||||| | ||||| |||||| |||||||||| |||||||||||||||    
T  16730468 aaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttattt 16730400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 610
Target Start/End: Original strand, 19900582 - 19900649
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||  ||||||||||    
T  19900582 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcacaaagattgtcgtt 19900649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 764
Target Start/End: Complemental strand, 8969818 - 8969603
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||| ||||| |||| |||||||| ||||||||| | | |||| ||   ||||||||||| |||||||||||||| ||||||||||| |     
T  8969818 aagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattt-tg 8969721  T
Q  642 gtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcag 740  Q
     |||||||||| ||||||    |||| ||||| ||| ||||||||| ||||||| |  |||| ||| |||||| | |||| |||  | |  ||||||||     
T  8969720 ttttgacgatataataaa----ttaagggttagaga-ttgcaatttatatctatatgcaacagagcaagttacat-tttttgttgcaaattagtaagcaa 8969627  T
Q  741 tggttaggattcttcgaatccccc 764  Q
    ||||||||| ||||||||||||||    
T  8969626 tggttaggactcttcgaatccccc 8969603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 624
Target Start/End: Complemental strand, 19374909 - 19374828
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||||||||| ||||| ||||| ||||| || ||||||||||||| |||||||   ||||||||||||||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaatt 19374828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 611
Target Start/End: Original strand, 22526369 - 22526435
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||| |||||||||| ||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgttt 22526435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 781
Target Start/End: Complemental strand, 22357632 - 22357388
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagta---tcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||  |||||||||| ||||||||||||||| ||||   || |||||||||||||||||||||  |  ||||| |||| |||||||||||    
T  22357632 aagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgttacttattt 22357533  T
Q  639 atagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagt 734  Q
    | || ||||||  |||||| | ||||| |||  |||| ||| ||||||||||||| | |||  || ||||| |||||| || ||||| ||  |||||||     
T  22357532 aaag-ttgacgatataaaaaataagagataagagttagaga-ttgcaatttttatttgtttgcaatatagcaagttacttgtttttgattgcagaaaagg 22357435  T
Q  735 aagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||  | |||||| | || ||||||||||||||||| || |||||    
T  22357434 aagcatcgtttaggactttttgaatcccccctatttattttgttgga 22357388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 11093966 - 11094062
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| ||||||||||| ||||| ||||| ||||||| |||||||||||  |||||||||||    |||||||||| |||| |||||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttcaatcaaacaattcacgttgcttattt 11094062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 11700666 - 11700610
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccaca 598  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||    
T  11700666 aagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 718 - 774
Target Start/End: Original strand, 11935237 - 11935293
Alignment:
Q  718 tttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatat 774  Q
    |||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaatcccctctatttatat 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 717 - 781
Target Start/End: Complemental strand, 19492632 - 19492568
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||  |||||||||||| | ||||||||||||||||||||||||| |||||||| |||||    
T  19492632 ttttggttgcagaaaagtaagcggcggttaggattcttcgaatcccccctgtttatattgttgga 19492568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 23080343 - 23080439
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| ||||  |||||||| | |||| |||||||||||| |||  ||| |||||||||||||||||   |||||||||| |||||||||||||    
T  23080343 aagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 577 - 635
Target Start/End: Original strand, 25094605 - 25094663
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||  ||||||||    
T  25094605 taagtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttactta 25094663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 9052667 - 9052771
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||  |||||||||| ||||| || ||||||||||||| ||||| ||  |||||| ||||   ||||||||||| ||||||    
T  9052667 ggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgttac 9052765  T
Q  633 ttattt 638  Q
    ||||||    
T  9052766 ttattt 9052771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 717 - 781
Target Start/End: Complemental strand, 13692601 - 13692537
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||| |||| | |||||| |||||    
T  13692601 ttttggttgcagaaaagtaagcagtagttaggattcttcgaatccgccctgtatatattgttgga 13692537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 729 - 781
Target Start/End: Original strand, 17106782 - 17106834
Alignment:
Q  729 aaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  17106782 aaaattaagcagtggttaggatccttcgaattccccctatttatattgttgga 17106834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 532 - 607
Target Start/End: Complemental strand, 12839887 - 12839812
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    |||||| ||||||||||| |||| | ||||||| | ||||| ||||| |||||||||| |||||||| ||||||||    
T  12839887 tggattaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccacaaggattgtc 12839812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 772
Target Start/End: Original strand, 23644943 - 23645008
Alignment:
Q  708 agttacctgttttggttt-aagaaaagtaagcagtggttaggattcttcgaatcccccctatttat 772  Q
    |||||||||||||||||  || |||||||||||| | ||||||||||||||||  |||||||||||    
T  23644943 agttacctgttttggttgcaaaaaaagtaagcagcgtttaggattcttcgaatttcccctatttat 23645008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 25097872 - 25097933
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||||||||||  |||||||| || |||||  |||||||||||    
T  25097872 taagtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttattt 25097933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 611
Target Start/End: Complemental strand, 43941880 - 43941815
Alignment:
Q  546 gtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttt 611  Q
    |||||||||| |||| ||||| |||||||||||||||  ||||| ||||||||| |||||| ||||    
T  43941880 gtaccaaattatttatcaagtaataaagtgataagtaaggtatcctatccacatagattgttgttt 43941815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 763
Target Start/End: Original strand, 4614929 - 4614960
Alignment:
Q  732 agtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||||||||||||||||||||    
T  4614929 agtaagcagtggttaggattcttcgaatcccc 4614960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 588
Target Start/End: Original strand, 12318426 - 12318481
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtat 588  Q
    ||||| || |||||||||||||  || ||||||| |||||||||||||||||||||    
T  12318426 ggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 717 - 763
Target Start/End: Complemental strand, 17026264 - 17026218
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||  ||| |||||||||| ||||||||||||||||||||||    
T  17026264 ttttggttgcagacaagtaagcagcggttaggattcttcgaatcccc 17026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 708 - 754
Target Start/End: Complemental strand, 19374742 - 19374696
Alignment:
Q  708 agttacctgttttggtttaagaaaagtaagcagtggttaggattctt 754  Q
    |||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  19374742 agttacctgttttggttgcagaaatgtaagcattggttaggattctt 19374696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 533 - 781
Target Start/End: Original strand, 39577 - 39827
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtcc-aaacaattcgcgtta 631  Q
    ||||| || |||||||| ||||| |||||||||| |||||||||||||||||| ||| ||||||||| |||||| ||||||||| ||| || || | |||    
T  39577 ggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcacttta 39676  T
Q  632 cttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaag 728  Q
    ||||||| ||  ||||||  |||||||||||||| |||   ||| ||| ||||||||||||||| |||  |||| ||| |||||||||||||||||  ||    
T  39677 cttattt-taagttgacgatataaaataaaagagataagaattagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgttttggttgcag 39774  T
Q  729 aaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    |||||||||||| ||||| || |||| ||||||||||||||||| || |||||    
T  39775 aaaagtaagcagcggttatgactctttgaatcccccctatttattttgttgga 39827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 542 - 781
Target Start/End: Original strand, 730 - 969
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcg-cgttacttatttat 640  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||  |||| ||| |||||||||||| ||||||||||| || |||||||||||| |    
T  730 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttacttattt-t 828  T
Q  641 agtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatag-cagttacctgttttggtttaagaaaagtaag 737  Q
    |  |||| |  |||||||||||||||||| ||||| |||||| ||||||||| || |||  |||| ||  || |||||| |||||||  |||||| ||||    
T  829 aagttgaagatataaaataaaagagttaagggttagagattt-caatttttacctgtttgcaacagagtaagatacctg-tttggttgtagaaaactaag 926  T
Q  738 cagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||| |||||||| |||| |||| |||||||||||| || |||||    
T  927 cagcggttaggactctttgaat-ccccctatttattttgttgga 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 63; Significance: 6e-27; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 533 - 781
Target Start/End: Original strand, 54853 - 55103
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtttt-gtccaaacaattcgcgtta 631  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||| ||| ||| |  | ||||||    
T  54853 ggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgtta 54952  T
Q  632 cttatttatagtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaa 727  Q
    ||||||| ||  || |||  ||||||||||| || ||| ||||| ||| || |||||||||| | |||   ||||||| ||||||||| ||||||||  |    
T  54953 cttattt-taagttaacgatataaaataaaaaagataagggttagaga-ttccaatttttatttgtttgcgacatagcaagttacctgtttttggttgca 55050  T
Q  728 gaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
     ||||| || || ||||||||| |||| |||| ||||||||||||||| |||||    
T  55051 caaaagaaaacactggttaggactctttgaat-ccccctatttatattattgga 55103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 638
Target Start/End: Complemental strand, 48284 - 48194
Alignment:
Q  545 tgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||| ||||   ||||||||||  || ||||||||||||| | ||||||||||    
T  48284 tgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaattctc-ttacttattt 48194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 638
Target Start/End: Original strand, 234362 - 234439
Alignment:
Q  561 ccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||| ||||||||||||||| |||||| || |||||  ||||||| ||| |||| ||||||||  || ||||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaattcttgtcacttattt 234439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 542 - 781
Target Start/End: Complemental strand, 168395 - 168156
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||  || ||| |  ||| ||||||||||| ||    
T  168395 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttacttattt-ta 168298  T
Q  642 gtttgacg--ataaaataaaagagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctg-ttttggtttaagaaaagtaag 737  Q
      ||||||  |||||||||||||  ||| ||||| |||||| |||||||||||| |||  |||| ||| |||||| || ||||||||  ||||||| ||     
T  168297 agttgacgatataaaataaaagacataagggttagagattt-caatttttatctgtttgcaacagagcaagttacttgtttttggttgtagaaaaggaaa 168199  T
Q  738 cagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||  |||||||| |||| |||| |||||| |||||||| |||||    
T  168198 caacggttaggactctttgaat-ccccctgtttatattgttgga 168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 576 - 781
Target Start/End: Complemental strand, 2881 - 2675
Alignment:
Q  576 ataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgat---aaaataaaagagttaaaggtt 672  Q
    |||||| ||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||| |  |||||| ||   | |||||||||||||| ||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattt-tgttttgacaatataataataaaagagttaagggtt 2783  T
Q  673 aaagatttgcaatttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccccctattta 771  Q
    | ||| ||||||||||||| |||||  |||||||| |||||| || ||| |||  |||||||||| ||  ||||| || ||||||||||| |||||||||    
T  2782 agaga-ttgcaatttttatttatttgcaacatagcaagttacatggttt-gttgtagaaaagtaaacaacggttaagactcttcgaatcctccctattta 2685  T
Q  772 tattcttgga 781  Q
    | || |||||    
T  2684 ttttgttgga 2675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 542 - 691
Target Start/End: Complemental strand, 181802 - 181654
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    |||||||||||||   ||||||||| |||||||||||| | ||||||| ||||||||| ||||||||||||||||||| || ||| |||||||||||       
T  181802 aagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttattttat 181704  T
Q  642 gtttgacgataaaataaaagagttaaaggttaa-agatttgcaatttttat 691  Q
    |||||||||| |||||||| || |||||||||| | ||||||||| |||||    
T  181703 gtttgacgatgaaataaaa-agataaaggttaagatatttgcaatatttat 181654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 11242 - 11338
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||| ||||   |||||||||| || ||||||||||    
T  11242 aagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 6289 - 6385
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| |||||| |||| ||||||| ||||||| |||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  6289 aagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 69915 - 70011
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||  |||||||||| ||||||||| ||||| |||||| ||| |||| |||||||||||| ||||||||||||| ||||||||||||    
T  69915 aagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattt 70011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 3534 - 3629
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||  |||||||||||    
T  3534 aagtgtaccaa-ttgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattt 3629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 607
Target Start/End: Original strand, 12111 - 12176
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtc 607  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | |||| ||| || ||||||||||    
T  12111 aagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 2372 - 2468
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||||||||||| | |||  ||||||||||| |||||| ||||||    
T  2372 aagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 2403 - 2499
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||||| ||||||||| | |||||| ||||||||||||||| ||||||||||||||| | |||  ||||||||||| |||||| ||||||    
T  2403 aagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattt 2499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 533 - 625
Target Start/End: Original strand, 1727 - 1819
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattc 625  Q
    ||||| || |||||||||||| |||||||||||| | |||||||||||||||||||| |||||||| | |||||||||||||  |||||||||    
T  1727 ggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaacaattc 1819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 638
Target Start/End: Complemental strand, 89950 - 89855
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| ||| | |||||||||| ||| |||||| |||||||||||||||    
T  89950 aagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttacttattt 89855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 562 - 720
Target Start/End: Complemental strand, 43304 - 43145
Alignment:
Q  562 caagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacg--ataaaataaa 659  Q
    ||||| ||||||||||||||| |||| | |||||||| |||||||||||| ||| |||||  ||| ||||||||||| ||  ||||||  ||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattt-taaattgacgatataaaataaa 43206  T
Q  660 agagttaaaggttaaagatttgcaatttttatctatttaaaacatagc-agttacctgtttt 720  Q
    |||| ||| ||||| ||| ||||||||||||||| |||  |||| ||| |||||||||||||    
T  43205 agagataagggttagaga-ttgcaatttttatctgtttgcaacagagcaagttacctgtttt 43145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 539 - 775
Target Start/End: Complemental strand, 922 - 684
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| |||| ||| ||||||| |||||||||||||||||||||| ||||||    ||||||||||| ||||||||||| | ||||||||||||    
T  922 ggaaagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattt 824  T
Q  639 at---agtttgacgataaaataaaagagttaaaggtt---aaagatttgcaatttttatctatttaaaacatagca--gttacctg-ttttggtttaaga 729  Q
     |   |||||||||||   ||||||||  ||| ||||   ||||| ||||||||||||||| |||  |||| || |   ||||||| ||||||||  |||    
T  823 ttataagtttgacgat---ataaaaga--taagggtttagaaaga-ttgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcaga 730  T
Q  730 aaagtaagcagtggttaggattcttcgaatcccccctatttatatt 775  Q
    |||||||| || ||||| ||||||||||| |||| || ||||||||    
T  729 aaagtaagaagcggttaagattcttcgaaccccctctgtttatatt 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 533 - 693
Target Start/End: Original strand, 69075 - 69232
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||  || ||||||| |||||||||||||| ||| ||| |||||||| ||||||||  ||| ||||||||||| || || |    
T  69075 ggattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgc 69173  T
Q  633 ttatttatagtttgacgataaaataaaagagttaaaggttaaagatttgcaatttttatct 693  Q
    |||||| ||| ||||| ||| |||||| ||| ||| ||||| ||| |||||||||||||||    
T  69174 ttatttttag-ttgacaatataataaacgag-taagggttatagaattgcaatttttatct 69232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 625
Target Start/End: Original strand, 81467 - 81571
Alignment:
Q  520 gatagtgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaa 619  Q
    |||||||||| ||||||| || |||| ||| |||| ||||||||| | |||||||||||||||| ||||  |||||||||||||||| |||| ||| |||    
T  81467 gatagtgatgggtggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtcaaaa 81565  T
Q  620 caattc 625  Q
     |||||    
T  81566 taattc 81571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 21279 - 21374
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| | ||| || |||| ||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||  ||||| |||||    
T  21279 aagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatattt 21374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 762
Target Start/End: Original strand, 21436 - 21488
Alignment:
Q  710 ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatccc 762  Q
    |||||||||||||||| ||||||||||| || | |||||||||||||||||||    
T  21436 ttacctgttttggtttcagaaaagtaagtagcgattaggattcttcgaatccc 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 25113 - 25199
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagcag--ttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||| |||||||  |||| ||||   |||||||||||||||  |||||||||||||  |||||||||||||| |||||||    
T  25113 ttgcaatttttctctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcaaatcccc 25199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 641
Target Start/End: Complemental strand, 486 - 387
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttata 641  Q
    ||||||| || || |||||| |||| ||||||||||| |||||||||| |||| ||| |||||||| ||| ||||||||||||| |||||  ||||||||    
T  486 aagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatatttata 387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 624
Target Start/End: Original strand, 3138 - 3236
Alignment:
Q  525 tgatgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 624  Q
    ||||||| ||||| || |||||||| |||||||||||||||| |||||||| || |||||||||| |||||||| |||||||| |||  |||||| ||||    
T  3138 tgatgtgcggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatt 3236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 569 - 655
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagc--agttacctgttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||||||||| |||  |||| |||  | |||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  569 ttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 638
Target Start/End: Original strand, 482 - 540
Alignment:
Q  580 gtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| ||||||||||||||||| ||| |||| ||||||||  |||| ||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattattt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 532 - 638
Target Start/End: Complemental strand, 4590 - 4484
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgtta 631  Q
    |||||| || || |||||| ||| ||||||||||| | ||| || |||| |||||||| ||||||||||||||||| ||| ||  |||||||||| ||||    
T  4590 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgtta 4491  T
Q  632 cttattt 638  Q
    |||||||    
T  4490 cttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 638
Target Start/End: Original strand, 19104 - 19208
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 632  Q
    ||||| || |||||||||||||||||| | |||| ||||| ||||||||| | |||| ||| |||||| ||| |||| ||||| |||||||||||||||     
T  19104 ggattaggcaagtgtaccaaattgttttc-aagtaataaaatgataagtaaattatcgtatgcacatgaattatcgtgttgtctaaacaattcgcgttaa 19202  T
Q  633 ttattt 638  Q
    ||||||    
T  19203 ttattt 19208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 610
Target Start/End: Complemental strand, 15571 - 15494
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgtt 610  Q
    ||||| || ||||||| |||||  |||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||    
T  15571 ggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

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Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 528 - 588
Target Start/End: Original strand, 72060 - 72120
Alignment:
Q  528 tgtgtggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtat 588  Q
    |||| ||||| || ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  72060 tgtgaggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagagtat 72120  T

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Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 727 - 781
Target Start/End: Original strand, 72199 - 72253
Alignment:
Q  727 agaaaagtaagcagtggttaggattcttcgaatcccccctatttatattcttgga 781  Q
    ||||||||||||||| || |||||||||||||||||| || |||||||| |||||    
T  72199 agaaaagtaagcagtagtaaggattcttcgaatcccctctgtttatattgttgga 72253  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 633
Target Start/End: Complemental strand, 18852 - 18750
Alignment:
Q  532 tggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatc-atatccacatggattgtcgttttgtccaaacaattcgcgtt 630  Q
    |||||| || |||||||||||||| |||| ||||| ||||| | ||||||||||||||  |||||||||| ||  |||| ||||| |||||||| |||||    
T  18852 tggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcgtgttgtctaaacaatttgcgtt 18753  T
Q  631 act 633  Q
    |||    
T  18752 act 18750  T

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Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 635
Target Start/End: Complemental strand, 223127 - 223033
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatc-atatccacatggattgtcgttttgtccaaacaattcgcgttactta 635  Q
    |||||| ||||||| |||| ||||| ||||| | ||||||||||||||  |||||||||| ||  || | ||||| |||||||||||||||||||    
T  223127 aagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgttatccacatgaatcatcatgttgtctaaacaattcgcgttactta 223033  T

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Target: scaffold0128 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 638
Target Start/End: Complemental strand, 664 - 592
Alignment:
Q  566 tgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    ||||||||||| |||||||||||  ||||||||| |||| | |||||||| ||| ||||| ||||||||||||    
T  664 tgataaagtgaaaagtagagtattgtatccacattgattctagttttgtctaaataattcacgttacttattt 592  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 539 - 626
Target Start/End: Complemental strand, 7512 - 7425
Alignment:
Q  539 ggaaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcg 626  Q
    ||||| ||||| |||| ||||| ||||| |||||||||||||||||||||  |||  ||| | |||||||||| ||| ||||||||||    
T  7512 ggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaattcg 7425  T

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Target: scaffold0263 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 763
Target Start/End: Original strand, 15785 - 15871
Alignment:
Q  679 ttgcaatttttatctatttaaaacatagca-gttacctgtttt-ggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    |||||||||||||| ||||  |||| |||| |||||||||||| ||||   ||||||||||||| |||||| |||||||||||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagttacctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaatcccc 15871  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 638
Target Start/End: Original strand, 29908 - 30004
Alignment:
Q  541 aaagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgt-tttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||  |||||| |  ||||||||| | ||| |||||||||  ||||||||||||    
T  29908 aaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgt-caaacaatttacgttacttattt 30004  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 638
Target Start/End: Original strand, 76455 - 76516
Alignment:
Q  577 taagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||||||||||||||| |||||||  ||| |||| ||||||||  |||||||||||    
T  76455 taagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttattt 76516  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 638
Target Start/End: Original strand, 78596 - 78692
Alignment:
Q  542 aagtgtaccaaattgtttaccaagtgataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 638  Q
    |||||||||| || ||||||||||| ||||| ||||||||  || ||| |||||| | ||||||||||||   | || |||| ||||||||||||||    
T  78596 aagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttcaacaaaccaatccgcgttacttattt 78692  T

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Target: scaffold0386 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 717 - 763
Target Start/End: Complemental strand, 6635 - 6589
Alignment:
Q  717 ttttggtttaagaaaagtaagcagtggttaggattcttcgaatcccc 763  Q
    ||||||||| | |||||||||||| ||| ||||||||||||||||||    
T  6635 ttttggtttcaaaaaagtaagcagcggtcaggattcttcgaatcccc 6589  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 579
Target Start/End: Original strand, 51116 - 51162
Alignment:
Q  533 ggattgggaaagtgtaccaaattgtttaccaagtgataaagtgataa 579  Q
    ||||| || ||||| ||||||||||||||||||| ||||||||||||    
T  51116 ggattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

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