View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18543_high_10 (Length: 272)
Name: NF18543_high_10
Description: NF18543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18543_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 47196515 - 47196259
Alignment:
| Q |
1 |
ctgaagtaagtttcttcctttctctcaagatcttaacttannnnnnnaactatgataatttagacttttcattctgcttgagtcaaatttaatataccga |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47196515 |
ctgaagtaagtttcttcttttctctcaagatcttaacttatttttttaactatgataatttagacttttcattctgcttgagtcaaatttaatataccga |
47196416 |
T |
|
| Q |
101 |
tcatagatgcatgcgttgaatgttttggttattatgcttcaaagaatctaatgttaacataatttcatagttttcatataaaaataatcaagccttgttg |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47196415 |
tcatagatgcatacgttgaatgttttggttattatgcttcaaagaatctaatgttaacataatttcatagttttcatataaaaataatcaagccttgttg |
47196316 |
T |
|
| Q |
201 |
tggagaggaatgaacatttggtatgtatatctaattggtcatttcttattgaatttt |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47196315 |
tggagaggaatgaacatttggtatgtatatctaattggtcatttcttattgaatttt |
47196259 |
T |
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