View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18546_low_8 (Length: 273)
Name: NF18546_low_8
Description: NF18546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18546_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 257
Target Start/End: Original strand, 29378816 - 29379065
Alignment:
| Q |
8 |
aagcaaaggagctaacatcattacttgtgacagttggcggaaatacaacttgtaggggagaaagaatgggtttggtcaaggatcattggcactccaaata |
107 |
Q |
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| T |
29378816 |
aagcaaaggagctaacatcattacttgtgacagttggcagaaatacaacttgtaggggagaaagaatgggtttggtcaaggatcattggcactccaaata |
29378915 |
T |
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| Q |
108 |
gtttatgtttacaaaactattggattacagtggnnnnnnnnnnnnnnnnnngaaattgttgacaatagcttataagagaatgaccagccaaaaaccttga |
207 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29378916 |
gtttatgtttacaaaactattggattacagtggcatcatcatcatcatcatgaaattgttgacaatagcttataagagaatgaccagccaaaaaccttga |
29379015 |
T |
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| Q |
208 |
tgacttgatgtacagtttagacagtctagtgaccttattatgctaacaaa |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29379016 |
tgacttgatgtacagtttagacagtctagtgaccttattatgctaacaaa |
29379065 |
T |
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