View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18549_low_31 (Length: 298)
Name: NF18549_low_31
Description: NF18549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18549_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 24880145 - 24879866
Alignment:
| Q |
1 |
ctaattaggtcgattagaagaggaagtgcttaaacgttccttgcgaactacgaaatccttagagaaaactaaataaaaccaagatacccataaattctaa |
100 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
24880145 |
ctaattaggtcaattagaagaggaagtgcttaaacgttccttgcgaactacgaaatccctagagaaaactaaataaaaccaagatacccataaattctaa |
24880046 |
T |
|
| Q |
101 |
ggttgcgatgatgaccacttttacgacatcgcatgattagactataagtcataaaccaccgtctaaaaaagccatttaaaacaaaaatgcacatgaaaat |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
24880045 |
agttgtgatgatgaccacttttacgacatcgcatgattagactataagtcataaaccaccgtctaaaaaaaccatttaaaacaaaaatgcacatgaaaat |
24879946 |
T |
|
| Q |
201 |
acataaaccatcagacaatcaatggttttcttaaacgaaactctaccattcatagtaaaaacagagttggcgacaaccct |
280 |
Q |
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|||||||| | ||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
24879945 |
acataaacaacgagagaatcagtggttttcttaaacgaaactctactattcatagtaaaaacagagttggcgacaaccct |
24879866 |
T |
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