View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18549_low_41 (Length: 254)
Name: NF18549_low_41
Description: NF18549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18549_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 32103484 - 32103718
Alignment:
| Q |
1 |
agtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagattgcaccgcagcctgca |
100 |
Q |
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| T |
32103484 |
agtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagattgcaccgcagcctgca |
32103583 |
T |
|
| Q |
101 |
acatgttttgaagcttactgcctaatggagatggagccgccattctttattcattcagtcattaccaaacagttttttctttcatttctctgcaatattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103584 |
acatgttttgaagcttactgcctaatggagatggagcagccattctttattcattcagtcattaccaaacagttttttctttcatttctctgcaatattt |
32103683 |
T |
|
| Q |
201 |
aatcatatctaaaacacctttccaaaagtaggaaa |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32103684 |
aatcatatctaaaacacctttccaaaagtaggaaa |
32103718 |
T |
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