View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18549_low_51 (Length: 227)
Name: NF18549_low_51
Description: NF18549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18549_low_51 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24880786 - 24880560
Alignment:
| Q |
1 |
tggagttaattggattaatggaagaaatcttgtttttaaatcctttgaccaaaaaataaaccaaagtatggctaaaaattagaacttatggctgtctttg |
100 |
Q |
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| T |
24880786 |
tggagttaattggattaatggaagaaatcttgtttttaaatcctttgaccaaaaaataaaccaaagtatggctaaaaattagaacttatggctgtctttg |
24880687 |
T |
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| Q |
101 |
gcaattaaaaaggaatgtaagatgaagagaaattgggggtttggatactaatcaaagtaagtcttatcaattggtcaacaaattaattatatcaagaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24880686 |
gcaattaaaaaggaatgtaagatgaagagaaattgggggtttggatactaatcaaagtaagtcttatcaattggtcaacaaattaattatatcaagaata |
24880587 |
T |
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| Q |
201 |
acagttttattttgtcattctacattt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
24880586 |
acagttttattttgtcattctacattt |
24880560 |
T |
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