View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1854_high_33 (Length: 395)

Name: NF1854_high_33
Description: NF1854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1854_high_33
NF1854_high_33
[»] scaffold0121 (1 HSPs)
scaffold0121 (195-382)||(30839-31029)
[»] chr8 (11 HSPs)
chr8 (10-177)||(41431267-41431435)
chr8 (61-138)||(4928254-4928332)
chr8 (78-139)||(13570476-13570537)
chr8 (78-139)||(10338540-10338601)
chr8 (78-127)||(10952017-10952066)
chr8 (78-127)||(10960022-10960071)
chr8 (80-139)||(32778681-32778740)
chr8 (61-139)||(40490242-40490321)
chr8 (78-139)||(13575918-13575979)
chr8 (78-139)||(37612995-37613056)
chr8 (78-138)||(2024934-2024994)
[»] chr4 (8 HSPs)
chr4 (79-149)||(40198243-40198313)
chr4 (61-139)||(9255013-9255091)
chr4 (78-139)||(626260-626321)
chr4 (7-139)||(27090995-27091128)
chr4 (78-139)||(31932606-31932667)
chr4 (78-139)||(42197912-42197973)
chr4 (78-139)||(56062333-56062394)
chr4 (79-139)||(24568416-24568476)
[»] chr5 (12 HSPs)
chr5 (46-139)||(11647510-11647604)
chr5 (54-119)||(37425336-37425402)
chr5 (54-119)||(37425441-37425507)
chr5 (61-139)||(26293951-26294030)
chr5 (85-139)||(7151162-7151216)
chr5 (78-139)||(2555051-2555112)
chr5 (78-139)||(42781360-42781421)
chr5 (78-138)||(32309855-32309915)
chr5 (80-139)||(11734546-11734605)
chr5 (61-119)||(34844242-34844301)
chr5 (79-139)||(13161705-13161765)
chr5 (78-138)||(33164171-33164231)
[»] chr2 (11 HSPs)
chr2 (61-139)||(27665876-27665956)
chr2 (76-139)||(20570315-20570378)
chr2 (49-139)||(45693811-45693902)
chr2 (78-137)||(11561390-11561449)
chr2 (79-149)||(12183036-12183105)
chr2 (81-139)||(40039024-40039082)
chr2 (78-139)||(12705045-12705106)
chr2 (78-119)||(25622773-25622814)
chr2 (78-119)||(34471319-34471360)
chr2 (78-138)||(5754641-5754701)
chr2 (99-139)||(20607155-20607195)
[»] chr6 (14 HSPs)
chr6 (78-137)||(35039035-35039094)
chr6 (78-139)||(6295950-6296011)
chr6 (78-139)||(6302760-6302821)
chr6 (78-138)||(21942143-21942203)
chr6 (61-139)||(16328791-16328870)
chr6 (7-139)||(2488409-2488542)
chr6 (83-139)||(23637823-23637879)
chr6 (51-128)||(892600-892678)
chr6 (78-139)||(8978457-8978518)
chr6 (78-139)||(12654019-12654080)
chr6 (78-139)||(16352250-16352311)
chr6 (82-119)||(18248803-18248840)
chr6 (83-139)||(19402553-19402609)
chr6 (83-119)||(22530547-22530583)
[»] chr1 (16 HSPs)
chr1 (77-140)||(12370297-12370360)
chr1 (78-139)||(10304922-10304983)
chr1 (78-139)||(15312328-15312389)
chr1 (78-139)||(25032804-25032865)
chr1 (59-139)||(47551419-47551500)
chr1 (79-139)||(32784439-32784499)
chr1 (78-163)||(33177282-33177368)
chr1 (78-138)||(40862536-40862596)
chr1 (99-138)||(2513347-2513386)
chr1 (84-139)||(29551466-29551521)
chr1 (54-139)||(7995278-7995364)
chr1 (109-139)||(30678629-30678659)
chr1 (81-138)||(13999304-13999361)
chr1 (61-117)||(23791320-23791377)
chr1 (78-139)||(28677840-28677901)
chr1 (79-123)||(25278561-25278605)
[»] chr7 (18 HSPs)
chr7 (82-139)||(26771231-26771288)
chr7 (78-139)||(32587240-32587301)
chr7 (78-139)||(37714823-37714884)
chr7 (78-139)||(38273248-38273309)
chr7 (79-139)||(38338884-38338944)
chr7 (80-139)||(8180162-8180221)
chr7 (58-136)||(9137279-9137358)
chr7 (61-138)||(24988202-24988280)
chr7 (47-136)||(45457260-45457350)
chr7 (78-139)||(10094799-10094860)
chr7 (78-139)||(14810827-14810888)
chr7 (85-163)||(15123687-15123766)
chr7 (78-139)||(15257822-15257883)
chr7 (78-139)||(21991021-21991082)
chr7 (82-135)||(22493328-22493381)
chr7 (78-119)||(38649087-38649128)
chr7 (79-139)||(4621081-4621141)
chr7 (79-119)||(38277157-38277197)
[»] chr3 (14 HSPs)
chr3 (79-139)||(38379463-38379523)
chr3 (78-139)||(3457281-3457342)
chr3 (78-139)||(3961491-3961552)
chr3 (59-139)||(4817589-4817670)
chr3 (78-139)||(31462464-31462525)
chr3 (78-146)||(43243152-43243219)
chr3 (81-136)||(50981178-50981233)
chr3 (81-136)||(51084312-51084367)
chr3 (61-139)||(41868042-41868120)
chr3 (78-139)||(31270668-31270729)
chr3 (78-119)||(31730970-31731011)
chr3 (78-118)||(4019942-4019982)
chr3 (79-139)||(11225693-11225753)
chr3 (79-127)||(20044590-20044638)
[»] scaffold0321 (1 HSPs)
scaffold0321 (54-139)||(6831-6917)


Alignment Details
Target: scaffold0121 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 195 - 382
Target Start/End: Complemental strand, 31029 - 30839
Alignment:
Q  195 aaactgtggcggagca-caacatct--aggggattcatttacaccaataatagtatttttattctatttaatttgaatccccttgtattttatgtttgca 291  Q
    |||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31029 aaactgtggcggagccgcaacatctttaggggattcatttacaccaataatagtatttttattctatttaatttgaatcccgttgtattttatgtttgca 30930  T
Q  292 cttactattctctatcaactcacaccgtaaagtaaacgacaatgtccatccaaagctacacgtagagaatagacaagggtatgttgtaatt 382  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30929 cttactattctctatcaactcacaccgcatagtaaatgacaatgtccatccaaagctacacgtagagaatagacaagggtatgttgtaatt 30839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 10 - 177
Target Start/End: Complemental strand, 41431435 - 41431267
Alignment:
Q  10 tattgtggagaattaaatatagccatattcataagtttatatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcat 108  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  41431435 tattgtggagaattaaatatagtcatattcataagtttatatattttgtcattttatactattaatatagatgttgtgagttcgttaacgtattcatcat 41431336  T
Q  109 ttttgtttttaacaactttgaatttgtattgatgtactctaagtttgaatgaatgcagtttatttttgt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41431335 ttttgtttttaacaactttgaatttgtattgatgtactctaagtttgaatgaatgcagtttatttttgt 41431267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 4928254 - 4928332
Alignment:
Q  61 ttttatactattaa-ttagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||||||||||||| || ||||| ||||||||||| |   ||||||| |||||||||||||| ||||||||||||||||    
T  4928254 ttttatactattaacttggatgtcgtgagtttgttcggagattcatcttttttgtttttaacgactttgaatttgtatt 4928332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 13570537 - 13570476
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||| |||||||||||||||| ||| |||||||||||    
T  13570537 gatgttgtgagtttgttcacatattcatcttttttgtttttaacaaatttaaatttgtattg 13570476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 10338601 - 10338540
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||| |||||||||||| ||| ||||||||| |||||    
T  10338601 gatgttgtgagtttgttcacatattcatcctttttgtttttagcaaatttgaatttctattg 10338540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 10952066 - 10952017
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaacttt 127  Q
    ||||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  10952066 gatgttgtgagtttgtttgcagattcatcatttttgtttttaacgacttt 10952017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 10960071 - 10960022
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaacttt 127  Q
    ||||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  10960071 gatgttgtgagtttgtttgcagattcatcatttttgtttttaacgacttt 10960022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 32778740 - 32778681
Alignment:
Q  80 tgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||| ||  |||||||||||||||||||| | |||||| ||||| ||||    
T  32778740 tgttgtgagtttgttcgcaaattcatcatttttgtttttagcgactttggatttgaattg 32778681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 40490321 - 40490242
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||  | |||||||||||||||||  |  |||||||||||||||||||| ||| |||| |||| |||||    
T  40490321 ttttatactattaacatggatgttgtgagtttgttcacagattcatcatttttgtttttagcaaatttggatttatattg 40490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 13575979 - 13575918
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  ||||||| |||||||||||| | |||||| || |||||||    
T  13575979 gatgttgtgagtttgttcgcaaattcatcctttttgtttttagcgactttggatatgtattg 13575918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 37612995 - 37613056
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||| ||||||||||||  |  ||||||| |||||||||||||| | |||||||||||||||    
T  37612995 gatgatgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttgtattg 37613056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 2024994 - 2024934
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||||||||||||||||  |  |||||||||||||||||||| | | |||| |||||||||    
T  2024994 gatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtatt 2024934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 40198313 - 40198243
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattgatgtactcta 149  Q
    |||||||||||||||| |   | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40198313 atgttgtgagtttgttcgtagactcatcatttttgtttttaacgactttgaatttgtattgatgtactcta 40198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 9255091 - 9255013
Alignment:
Q  61 ttttatactattaattagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||   ||| ||||||||| ||| | | |||||||||||||||||||||||||||| |||||||||||    
T  9255091 ttttatgctattaacatgatattgtgagttggtttgaggattcatcatttttgtttttaacaactttaaatttgtattg 9255013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 626321 - 626260
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||| |||||  | |||||||| |||||||||||| ||| |||||||||||||||    
T  626321 gatgttgtgagcttgttcacatattcatcctttttgtttttagcaaatttgaatttgtattg 626260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 27090995 - 27091128
Alignment:
Q  7 gagtattgtggagaattaaatatagccatattcataagtttatatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcat 105  Q
    ||||||| |||||| ||||| |||| || |||  ||||  || ||| ||| || |||||| |||||||  |||||||||| |||||||| || |||| ||    
T  27090995 gagtattctggagacttaaacatagtcacatttgtaagcatagatactttgtcgttttatgctattaacatagatgttgtaagtttgttcgcatatttat 27091094  T
Q  106 catttttgtttttaacaactttgaatttgtattg 139  Q
    | |||||||||||||  |||||| ||||||||||    
T  27091095 cctttttgtttttaatgactttggatttgtattg 27091128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 31932606 - 31932667
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||||| || |||||||  |||||||||||||| | |||||||||||||||    
T  31932606 gatgttatgagtttgttcgcatattcatactttttgtttttaacgattttgaatttgtattg 31932667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 42197912 - 42197973
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  |  || |||| |||||||||||| ||| |||||||||||||||    
T  42197912 gatgttgtgagtttgttcacagatccatcctttttgtttttagcaaatttgaatttgtattg 42197973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 56062333 - 56062394
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||| |||||||| |  |||| ||| |||||||||||| | |||||||||||||||||    
T  56062333 gatgttgtaagtttgttcgtatattaatcctttttgtttttagcgactttgaatttgtattg 56062394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 24568476 - 24568416
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||  | |||||||| |||||||||||| | | ||||||||| |||||    
T  24568476 atgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttatattg 24568416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 11647510 - 11647604
Alignment:
Q  46 ttatatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||| |||||| |||||||| | ||||||  | ||||||||||||||||  || ||||||||||||||||||||| | |||||||||||||||||    
T  11647510 ttatgtattttgtcattttaaattattaacgtggatgttgtgagtttgtacgcatattcatcatttttgtttttagcgactttgaatttgtattg 11647604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 37425336 - 37425402
Alignment:
Q  54 tttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    |||||||||||||||||||||  ||||||||||||||||| |  | |||||||||||||||||||||    
T  37425336 tttatcattttatactattaacatagatgttgtgagtttgatcacatattcatcatttttgttttta 37425402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 37425441 - 37425507
Alignment:
Q  54 tttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||| |||||||  |||||||||||||||||||  | |||||||||||||||||||||    
T  37425441 tttatcattttatgctattaacatagatgttgtgagtttgttcacatattcatcatttttgttttta 37425507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 26293951 - 26294030
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||| | |||||||||||||||||  | |||||||| |||||||||||| | | |||||||||||||||    
T  26293951 ttttatgctattaatatggatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattg 26294030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 7151162 - 7151216
Alignment:
Q  85 tgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||| | | ||||||| |||||||||||||| |||||||||||||||||    
T  7151162 tgagtttgttcgtggattcatcttttttgtttttaacgactttgaatttgtattg 7151216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 2555112 - 2555051
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||| ||||||||||||| || |||| ||||||||||    
T  2555112 gatgttgtgagtttgttcacatattcatcctttttgtttttaagaaatttggatttgtattg 2555051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 42781360 - 42781421
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||| |  ||||||| ||||| |||||| | |||||||||||||||||    
T  42781360 gatgttgtgagtttgttaacaaattcatcctttttatttttagcgactttgaatttgtattg 42781421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 32309855 - 32309915
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    ||||||||||||||||| ||  ||||||| ||||| |||||||| ||||||||||| ||||    
T  32309855 gatgttgtgagtttgttcgcagattcatcttttttatttttaacgactttgaatttatatt 32309915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 11734605 - 11734546
Alignment:
Q  80 tgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||  | |||||||| |||||||||||| | | |||||||||||||||    
T  11734605 tgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattg 11734546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 34844242 - 34844301
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||||  | |||||||||||||||||  | |||||||||||||||||||||    
T  34844242 ttttatactattaacatggatgttgtgagtttgttcacatattcatcatttttgttttta 34844301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 13161705 - 13161765
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||| |||||||||||  ||||||  |||||||||| ||  |||||||||||||||||    
T  13161705 atgttgtaagtttgttagcagattcatgctttttgttttaaatgactttgaatttgtattg 13161765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 33164231 - 33164171
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||| ||||||||||||  || |||||||  ||||||||||| ||| ||||||||||||||    
T  33164231 gatgatgtgagtttgtttacggattcatcccttttgtttttagcaaatttgaatttgtatt 33164171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 27665876 - 27665956
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcg-tattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||  ||||||||||||||||||| ||  ||||||||||||||||||||| ||| ||| |||||||||||    
T  27665876 ttttatactattaacatagatgttgtgagtttgttcgcaatattcatcatttttgtttttagcaattttaaatttgtattg 27665956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 20570315 - 20570378
Alignment:
Q  76 tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||||||| || ||||||||||||||||||||| | | |||||||||| ||||    
T  20570315 tagatgctgtgagtttgttcgcatattcatcatttttgtttttagcgattttgaatttgaattg 20570378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 45693902 - 45693811
Alignment:
Q  49 tatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||| ||| ||||||||| |||||||  |||||| |||||||||||| ||  | |||||||||||||||||| | ||||||||||| |||||    
T  45693902 tatactttgtcattttatgctattaacatagatgatgtgagtttgtttgcagaatcatcatttttgtttttagcgactttgaatttctattg 45693811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 11561449 - 11561390
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtat 137  Q
    |||||||| |||||||| ||  ||||||| ||||| |||||| |||||||||||||||||    
T  11561449 gatgttgtaagtttgttcgcagattcatcctttttatttttagcaactttgaatttgtat 11561390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 12183105 - 12183036
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattgatgtactcta 149  Q
    |||||||||||||||| ||  |||||||  ||||||||||||||| |||| | |||||||||| |||||||    
T  12183105 atgttgtgagtttgttcgcagattcatctattttgtttttaacaaatttgta-ttgtattgatatactcta 12183036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 40039082 - 40039024
Alignment:
Q  81 gttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||| |   |||||||||||||||||||||  ||||||||||| |||||    
T  40039082 gttgtgagtttgttcgtagattcatcatttttgtttttaatgactttgaatttttattg 40039024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 12705045 - 12705106
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  |  |||||||||||||||||||| | | |||| ||||||||||    
T  12705045 gatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtattg 12705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 25622814 - 25622773
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  25622814 gatgttgtgagtttgttcgcatattcatcctttttgttttta 25622773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 34471319 - 34471360
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  34471319 gatgttgtgagtttgttcacatattcatcatttttgttttta 34471360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 5754641 - 5754701
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||| ||||||||||||  | |||||||| |||||||||||| | | ||||||||||||||    
T  5754641 gatgatgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtatt 5754701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 20607195 - 20607155
Alignment:
Q  99 tattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||| |||||| | |||||||||||||||||    
T  20607195 tattcatcatttttatttttagcgactttgaatttgtattg 20607155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 35039035 - 35039094
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtat 137  Q
    ||||||||||||||||| ||  ||| |||||||||||||||||| |||||||||||||||    
T  35039035 gatgttgtgagtttgttcgcagatttatcatttttgtttttaacgactttgaatttgtat 35039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 6296011 - 6295950
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  || |||| ||||||||||||||| ||| |||||||||||||||    
T  6296011 gatgttgtgagtttgttcacggattcgtcatttttgtttttagcaaatttgaatttgtattg 6295950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 6302821 - 6302760
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  || |||| ||||||||||||||| ||| |||||||||||||||    
T  6302821 gatgttgtgagtttgttcacggattcgtcatttttgtttttagcaaatttgaatttgtattg 6302760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 21942203 - 21942143
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    ||||||||||||||||| ||  ||||||||||||| |||||||||| ||||||||| ||||    
T  21942203 gatgttgtgagtttgtttgcagattcatcatttttatttttaacaattttgaatttttatt 21942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 16328870 - 16328791
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||| | |||||||| |||||||| || |||||||| ||||||||| || | |||||||||||||||||    
T  16328870 ttttatgctattaatatggatgttgtaagtttgtttgcatattcatcttttttgtttatagcgactttgaatttgtattg 16328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 2488409 - 2488542
Alignment:
Q  7 gagtattgtggagaattaaatatagccatattcataagtttatatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcat 105  Q
    ||||||| |||||| ||||| |||| || |||  ||||  || ||| ||| || |||||| |||||||  |||||||||| |||||||| || |||| ||    
T  2488409 gagtattctggagacttaaacatagtcacatttgtaagcatagatactttgtcgttttatgctattaacatagatgttgtaagtttgttcgcatatttat 2488508  T
Q  106 catttttgtttttaacaactttgaatttgtattg 139  Q
    | |||||||||||||  |||||| ||||||||||    
T  2488509 cctttttgtttttaatgactttggatttgtattg 2488542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 23637879 - 23637823
Alignment:
Q  83 tgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||  | ||||||||||||||||||||| |||  ||||||||||||||    
T  23637879 tgtgagtttgttcacatattcatcatttttgtttttagcaaaattgaatttgtattg 23637823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 892600 - 892678
Alignment:
Q  51 tattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttg 128  Q
    ||||||||| ||||||| ||||||  | ||||| ||||||||||| ||  || ||||||||||||||||||||| ||||    
T  892600 tattttatcgttttatattattaacatggatgtcgtgagtttgttcgcagatccatcatttttgtttttaacaaatttg 892678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 8978518 - 8978457
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||   |||||| |||||||||||  | |||||||||||||||||    
T  8978518 gatgttgtgagtttgttcgcaatttcatcttttttgtttttggcgactttgaatttgtattg 8978457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 12654080 - 12654019
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||| |||||||||||| ||  |||||||||||||||||||| | |||||| | ||||||||    
T  12654080 gatgatgtgagtttgttcgcagattcatcatttttgtttttagcgactttggaattgtattg 12654019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 16352311 - 16352250
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||| |||||||| || |||||||| ||||||||| || | ||||| |||||||||||    
T  16352311 gatgttgtaagtttgtttgcatattcatcttttttgtttatagcgacttttaatttgtattg 16352250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 18248840 - 18248803
Alignment:
Q  82 ttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||| || |||||||||||||||||||||    
T  18248840 ttgtgagtttgttcgcatattcatcatttttgttttta 18248803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 19402609 - 19402553
Alignment:
Q  83 tgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||  | |||||||| |||||||||||||| | |||| ||||||||||    
T  19402609 tgtgagtttgttcacatattcatcctttttgtttttaacgaatttggatttgtattg 19402553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 22530547 - 22530583
Alignment:
Q  83 tgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    |||||||||||| || |||||||||||||||||||||    
T  22530547 tgtgagtttgttcgcatattcatcatttttgttttta 22530583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 12370297 - 12370360
Alignment:
Q  77 agatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattga 140  Q
    ||||||||||| |||||||||| ||||||| |||||||||||| | ||||||||||| ||||||    
T  12370297 agatgttgtgaatttgttagcggattcatcctttttgtttttagcgactttgaatttatattga 12370360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 10304922 - 10304983
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||| |||||    
T  10304922 gatgttgtgagtttgtttgcagattcatcatttttgtttttatcaattttgaatttatattg 10304983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 15312389 - 15312328
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  ||||||| ||||| |||||||| |||||| ||||||||||    
T  15312389 gatgttgtgagtttgttcgcagattcatcctttttatttttaacgactttggatttgtattg 15312328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 25032865 - 25032804
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||| |||||| ||  ||||||| |||||||||||| | |||||||||||||||||    
T  25032865 gatgttgtgaatttgttcgcagattcatcctttttgtttttagcgactttgaatttgtattg 25032804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 47551419 - 47551500
Alignment:
Q  59 cattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||| |||||||  |||||||||||||||||||  | |||||||| |||||||||||| | | |||| ||||||||||    
T  47551419 cattttatgctattaacatagatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattg 47551500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 32784439 - 32784499
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||    |||||||||||||||||||| | | |||||||||||||||    
T  32784439 atgttgtgagtttgttaaaaaattcatcatttttgtttttagcgaatttgaatttgtattg 32784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 33177368 - 33177282
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattgatgtactcta--agtttgaatgaatg 163  Q
    ||||||||||||||||| ||  ||||||| |||||||||||| ||| |||| | |||||| |||||||||||  | ||||||||||||    
T  33177368 gatgttgtgagtttgttcgcagattcatcctttttgtttttagcaaatttgca-ttgtatcgatgtactctattaatttgaatgaatg 33177282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 40862596 - 40862536
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||||| |||||||||| ||  ||||||||| ||||||||||||| ||| |||||||||||    
T  40862596 gatgttttgagtttgttcgcagattcatcatctttgtttttaacagcttagaatttgtatt 40862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 2513386 - 2513347
Alignment:
Q  99 tattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  2513386 tattcatcatttttatttttaacgactttgaatttgtatt 2513347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 29551521 - 29551466
Alignment:
Q  84 gtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||| || |||||||| |||||||||||| | |||||||| ||||||||    
T  29551521 gtgagtttgtttgcatattcatcctttttgtttttagcgactttgaaattgtattg 29551466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 7995364 - 7995278
Alignment:
Q  54 tttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||| |||||||  | |||||||||||||||||  |  ||||||| |||||||||||| | | |||| ||||||||||    
T  7995364 tttatcattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattg 7995278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 139
Target Start/End: Original strand, 30678629 - 30678659
Alignment:
Q  109 ttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||||||||||||||||    
T  30678629 ttttgtttttaacaactttgaatttgtattg 30678659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 13999304 - 13999361
Alignment:
Q  81 gttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    |||||||||||||| ||  ||||||||||||||||| ||   ||||||||||||||||    
T  13999304 gttgtgagtttgttcgcagattcatcatttttgtttatagtgactttgaatttgtatt 13999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 23791320 - 23791377
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttt 117  Q
    ||||||||||||||  || ||||||||||||||||  | |||||||||||||||||||    
T  23791320 ttttatactattaacataaatgttgtgagtttgttctcatattcatcatttttgtttt 23791377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 28677901 - 28677840
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  ||||||| |||||||||||| | | |||| ||||||||||    
T  28677901 gatgttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttggatttgtattg 28677840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 25278605 - 25278561
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaa 123  Q
    |||||||||||||||| ||  ||||||| ||||||||||||||||    
T  25278605 atgttgtgagtttgttcgcagattcatcctttttgtttttaacaa 25278561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 26771288 - 26771231
Alignment:
Q  82 ttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||| || ||||||||||||||||||||| | ||||||||||| |||||    
T  26771288 ttgtgagtttgtttgcatattcatcatttttgtttttaccgactttgaatttatattg 26771231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 32587301 - 32587240
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| || |||||||| ||||||||||||   |||||||| ||||||||    
T  32587301 gatgttgtgagtttgttcgcatattcatcctttttgtttttagtgactttgaaattgtattg 32587240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 37714823 - 37714884
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| || |||||||| ||||| |||||   ||||||||||||||||||    
T  37714823 gatgttgtgagtttgttcgcatattcatcttttttatttttcttaactttgaatttgtattg 37714884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 38273248 - 38273309
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||||||  ||||||| |||||||||||||  |||||| |||| |||||    
T  38273248 gatgttgtgagtttgttagcaaattcatcctttttgtttttaaggactttggatttatattg 38273309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 38338944 - 38338884
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||    |||||||  |||||||||||||||||||||||||| |||||    
T  38338944 atgttgtgagtttgttcatatattcattctttttgtttttaacaactttgaatttatattg 38338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 8180162 - 8180221
Alignment:
Q  80 tgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||  | ||||||||||||||||||||| | | |||| ||||||||||    
T  8180162 tgttgtgagtttgttcacatattcatcatttttgtttttagcgaatttggatttgtattg 8180221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 9137279 - 9137358
Alignment:
Q  58 tcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgta 136  Q
    ||||||||| |||||||  | |||| |||||||||||| |   ||||||| |||||||||||| ||||||||||||||||    
T  9137279 tcattttatgctattaacatggatgatgtgagtttgttcgtaaattcatcctttttgtttttagcaactttgaatttgta 9137358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 24988280 - 24988202
Alignment:
Q  61 ttttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtatt 138  Q
    ||||||||||||||  |||||||||||| ||||||    ||||||||||||||||||||| | | |||| |||||||||    
T  24988280 ttttatactattaacatagatgttgtgattttgttcatatattcatcatttttgtttttagcgaatttggatttgtatt 24988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 45457350 - 45457260
Alignment:
Q  47 tatatattttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgta 136  Q
    ||||||||||  | |||||| |||||||| | |||||||||||||||||  |  ||||||| |||||||||||| | | ||||||||||||    
T  45457350 tatatattttgccgttttatgctattaatatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgta 45457260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 10094799 - 10094860
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  |  ||||||| |||||||||||| ||| ||||||||| |||||    
T  10094799 gatgttgtgagtttgttcacagattcatcctttttgtttttagcaaatttgaatttctattg 10094860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 14810827 - 14810888
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||||||||| |||||| ||| |||  ||||||||||    
T  14810827 gatgttgtgagtttgttcacatattcatcatttttatttttagcaattttctatttgtattg 14810888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 15123766 - 15123687
Alignment:
Q  85 tgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattgatgtactcta--agtttgaatgaatg 163  Q
    |||||||||| ||  |||||||||||||||||||| ||| ||||  ||||||||||| |||||||  | ||||||||||||    
T  15123766 tgagtttgttcgcaaattcatcatttttgtttttagcaaatttg-ctttgtattgatctactctatcaatttgaatgaatg 15123687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 15257822 - 15257883
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||||||||| |||||| ||| |||  ||||||||||    
T  15257822 gatgttgtgagtttgttcacatattcatcatttttatttttagcaattttctatttgtattg 15257883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 21991021 - 21991082
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  | |||||||| |||||||||||| | | |||| ||||||||||    
T  21991021 gatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattg 21991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 22493328 - 22493381
Alignment:
Q  82 ttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgt 135  Q
    |||||| |||||| ||| ||||||| |||||||||||| | |||||||||||||    
T  22493328 ttgtgattttgttcgcgcattcatcctttttgtttttagcgactttgaatttgt 22493381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 38649128 - 38649087
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  38649128 gatgttgtgagtttgttcgcatattcatcctttttgttttta 38649087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 4621141 - 4621081
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| |  ||||||| |||||||||||||| | |||| ||||| ||||    
T  4621141 atgttgtgagtttgttaacagattcatcctttttgtttttaacgaatttggatttgaattg 4621081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 38277157 - 38277197
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||| |||||||||||  ||||||||||||||||||||    
T  38277157 atgttgtaagtttgttagcagattcatcatttttgttttta 38277197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 38379523 - 38379463
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||  |  ||| ||| ||||||||||||||||||||||||||||||||    
T  38379523 atgttgtgagtttgttcacaaatttatcctttttgtttttaacaactttgaatttgtattg 38379463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 3457281 - 3457342
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  |||||||||||||||||||| | | |||| ||||||||||    
T  3457281 gatgttgtgagtttgttcgcaaattcatcatttttgtttttagcgaatttggatttgtattg 3457342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 3961552 - 3961491
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||   |||||||||||||||||    
T  3961552 gatgttgtgagtttgtttgcaaattcatcatttttgtttatagtgactttgaatttgtattg 3961491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 4817670 - 4817589
Alignment:
Q  59 cattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||||||||||  | |||||||||||||||||  | |||||||  |||||||||||||| | ||||||||| |||||    
T  4817670 cattttatactattaacatggatgttgtgagtttgttcacatattcatgctttttgtttttaacgaatttgaatttatattg 4817589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 31462525 - 31462464
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||||| || ||||||||||||||||||||| | | ||| |||||||||||    
T  31462525 gatgttttgagtttgttcgcatattcatcatttttgtttttagcgaatttaaatttgtattg 31462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 43243152 - 43243219
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattgatgtact 146  Q
    |||| ||||||||| || || ||||||||||||||||||||| ||| |||| | |||||||||||||||    
T  43243152 gatgatgtgagtttcttcgcatattcatcatttttgtttttagcaaatttgca-ttgtattgatgtact 43243219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 50981233 - 50981178
Alignment:
Q  81 gttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgta 136  Q
    ||||||||||| || || ||||||||||||||||||||| | ||||| ||||||||    
T  50981233 gttgtgagtttattcgcatattcatcatttttgtttttagcgactttaaatttgta 50981178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 51084367 - 51084312
Alignment:
Q  81 gttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgta 136  Q
    ||||||||||| || || ||||||||||||||||||||| | ||||| ||||||||    
T  51084367 gttgtgagtttattcgcatattcatcatttttgtttttagcgactttaaatttgta 51084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 41868120 - 41868042
Alignment:
Q  61 ttttatactattaattagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||| |||||||   |||| ||||||||||||  | |||||||| |||||||||||| | | |||||||||||||||    
T  41868120 ttttatgctattaacatgatggtgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattg 41868042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 31270668 - 31270729
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||||||||||||||||  |  ||||||| |||||||||||| | | |||||||||||||||    
T  31270668 gatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattg 31270729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 31730970 - 31731011
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgttttta 119  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  31730970 gatgttgtgagtttgttcgcatattcatcctttttgttttta 31731011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 4019942 - 4019982
Alignment:
Q  78 gatgttgtgagtttgttagcgtattcatcatttttgttttt 118  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  4019942 gatgttgtgagtttgtttgcagattcatcatttttgttttt 4019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 11225693 - 11225753
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    ||||||||| |||||| ||  |||| || |||||||||||||||||||| ||||| |||||    
T  11225693 atgttgtgattttgttcgcaaattcgtcctttttgtttttaacaactttaaatttctattg 11225753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 20044638 - 20044590
Alignment:
Q  79 atgttgtgagtttgttagcgtattcatcatttttgtttttaacaacttt 127  Q
    ||||||| |||||||| || || ||||||||||| ||||||||||||||    
T  20044638 atgttgttagtttgttcgcataatcatcatttttatttttaacaacttt 20044590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 6917 - 6831
Alignment:
Q  54 tttatcattttatactattaat-tagatgttgtgagtttgttagcgtattcatcatttttgtttttaacaactttgaatttgtattg 139  Q
    |||| |||||||| |||||||  | |||||||||||||||||  |  ||||||| |||||||||||| | | |||||||||||||||    
T  6917 tttaccattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattg 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University