View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1854_low_37 (Length: 391)
Name: NF1854_low_37
Description: NF1854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1854_low_37 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 13 - 372
Target Start/End: Complemental strand, 3617589 - 3617228
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3617589 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactctacaatgggatgtgatgaagaacatgattaccaacctcctt |
3617490 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3617489 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagatattacatggtcagatgcttg |
3617390 |
T |
|
| Q |
213 |
attgtagaagatgaaatgtgtgtttgtgttgtaatcattatgtgatagtgtgtactgttatttcttatcttatgtgtattatgtaattgttattaccaat |
312 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3617389 |
attgtagaagatgaaatgtgtgtttgtgctgtaatcattatgtgatagtgtgtactgttatttcttatcttatgcgtattatgtaaatgttattaccaat |
3617290 |
T |
|
| Q |
313 |
gatcattctactgtaaattaagaaaattcaatac--atatcccatggttttaaaatgtgcat |
372 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
3617289 |
gatcattctattgtaaattaagaaaattcaatacatatatcccatggttttaaaatgtgcat |
3617228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 13 - 371
Target Start/End: Complemental strand, 29058282 - 29057920
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
29058282 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattatcaacctcctt |
29058183 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29058182 |
gcccaaacaacattgttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttg |
29058083 |
T |
|
| Q |
213 |
attgtagaagatgaaa----tgtgtgtttgtgttgtaatcattatgtgatagtgtgtactgttatttcttatcttatgtgtattatgtaattgttattac |
308 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| |||| |||| |
|
|
| T |
29058082 |
attgtagaagatgaaatatgtgtgtttttgtgttgtaataattatgtgatattgtgtacttttatttctcatcttatgtgtattatgtaaatgttgttac |
29057983 |
T |
|
| Q |
309 |
caatgatcattctactgtaaattaagaaaattcaatacatatcccatggttttaaaatgtgca |
371 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
29057982 |
cagtgatcattctgttgtaaattaagaaaattcaatacatttaacatggttttaaaatgtgca |
29057920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 13 - 369
Target Start/End: Complemental strand, 29071510 - 29071152
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29071510 |
attaccataagtgccaatggaagaagtgtagtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgattaccaacctcctt |
29071411 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29071410 |
gtccaaacaacattgttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttg |
29071311 |
T |
|
| Q |
213 |
attgtagaagatgaaatgtg--tgtttgtgttgtaatcattatgtgatagtgtgtactgttatttcttatcttatgtgtattatgtaattgttattacca |
310 |
Q |
| |
|
|||||||||||||||||||| | |||||| |||||| |||||||||||||||||| |||||||| |||||||||| ||||||||| | || ||||| |
|
|
| T |
29071310 |
attgtagaagatgaaatgtgtctttttgtgctgtaatatttatgtgatagtgtgtacatttatttctcatcttatgtggattatgtaaatattgctacca |
29071211 |
T |
|
| Q |
311 |
atgatcattctactgtaaattaagaaaattcaatacatatcccatggttttaaaatgtg |
369 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||| | || ||||||||||||||| |
|
|
| T |
29071210 |
gtgatcattctgttgtaaattaagaaagttaaatacattttccgtggttttaaaatgtg |
29071152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 28956864 - 28957065
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
||||| || ||||| ||||| |||||||| ||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28956864 |
attacaattagtgcgaatgggaaaagtgtggtggccatggttgttgatgagtgtgactccacaaagggatgtgatgaagaacatgattaccaacctcctt |
28956963 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28956964 |
gtccaaacaacattgttgatgcttccaaggctgtgtgggaagctttaggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttg |
28957063 |
T |
|
| Q |
213 |
at |
214 |
Q |
| |
|
|| |
|
|
| T |
28957064 |
at |
28957065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 29069048 - 29068847
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
29069048 |
attaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattaccaacctcctt |
29068949 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| || ||||||| |||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29068948 |
gtccaaataacattgttgatgcttccaaggctgtgtggaaagctttaaatgtgcctaaagagcaatggggtggccttgacattacatggtcagatgcttg |
29068849 |
T |
|
| Q |
213 |
at |
214 |
Q |
| |
|
|| |
|
|
| T |
29068848 |
at |
29068847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 3619062 - 3619263
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||| || || ||||||| |||||| || |||||||| ||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3619062 |
attaccatcagcgcgaatggaagaagtgtggttgccacggttgttgatgagtgcgactctacgatgggatgtgataaagaacatgattaccaacctcctt |
3619161 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||||||||||||||||||| ||| ||||| |||||||||||||| | || ||||||||||| |||||||| |
|
|
| T |
3619162 |
gtaacaacaacatagttgatgcctctaaagctgtgtggaaagccttggatgttcctcatgatcaatggggtggattggatattacatggtctgatgcttg |
3619261 |
T |
|
| Q |
213 |
at |
214 |
Q |
| |
|
|| |
|
|
| T |
3619262 |
at |
3619263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 29078243 - 29078043
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
||||| || ||||| ||||||| || ||| ||||||| ||| || || ||||| || || | || ||||||||||||| | ||||| |||||||| |||| |
|
|
| T |
29078243 |
attacaatcagtgctaatggaagaaatgtcgtggccatggttgtcgacgagtgcgattctagaaagggatgtgatgaacagcatgactaccaaccacctt |
29078144 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
|| |||||||||||||||||||||| || |||||||||||||| || ||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29078143 |
gtacaaacaacattgttgatgcttccaaagctgtgtggaaagctttaggtgtgcctaaagaacaatggggtggccttgacattacatggtcagatgcttg |
29078044 |
T |
|
| Q |
213 |
a |
213 |
Q |
| |
|
| |
|
|
| T |
29078043 |
a |
29078043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 214
Target Start/End: Complemental strand, 29110994 - 29110793
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
||||| || ||||| ||||||| || ||| ||||||| ||| ||||| ||||| || || | || ||||||||||||| | ||||| |||||||| || | |
|
|
| T |
29110994 |
attacaatcagtgctaatggaagaaatgtcgtggccatggttgttgacgagtgcgattctagaaagggatgtgatgaacagcatgactaccaaccaccgt |
29110895 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||| || ||||||||| |||| ||||||||||| || || |||||||||||||||||||| |
|
|
| T |
29110894 |
gtccaaacaacattgttgatgcttccaaagctgtgtggaaagctttaggtgtgcctaaagaacaatggggtggtcttgatattacatggtcagatgcttg |
29110795 |
T |
|
| Q |
213 |
at |
214 |
Q |
| |
|
|| |
|
|
| T |
29110794 |
at |
29110793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 29073145 - 29073337
Alignment:
| Q |
22 |
agtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaaca |
121 |
Q |
| |
|
||||| || |||| |||||| ||||||| || |||||||||||||| || | | ||||| ||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
29073145 |
agtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaaca |
29073244 |
T |
|
| Q |
122 |
acattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttgat |
214 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
29073245 |
acatagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtccgatgcttgat |
29073337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 29116253 - 29116445
Alignment:
| Q |
22 |
agtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaaca |
121 |
Q |
| |
|
||||| || |||| |||||| ||||||| || |||||||||||||| || | | ||||| ||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
29116253 |
agtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaaca |
29116352 |
T |
|
| Q |
122 |
acattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttgat |
214 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
29116353 |
acatagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgat |
29116445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 29102108 - 29102300
Alignment:
| Q |
22 |
agtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaaca |
121 |
Q |
| |
|
||||| || |||| ||| || ||||||| || |||||||||||||| || | | ||||| ||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
29102108 |
agtgcgaacggaagaagcgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaaca |
29102207 |
T |
|
| Q |
122 |
acattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttgat |
214 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
29102208 |
acatagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgat |
29102300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 29066811 - 29067009
Alignment:
| Q |
16 |
accataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtc |
115 |
Q |
| |
|
|||||||||| ||||| ||||||| || || | ||| |||||||| ||||||||| ||| ||| ||||||| ||||||||| || |||||||| ||| |
|
|
| T |
29066811 |
accataagtggaaatggtcaaagtgtggttgcaatggtagttgatgaatgtgactcatcaaaggggtgtgatgcagaacatgagtatcaacctccatgtg |
29066910 |
T |
|
| Q |
116 |
caaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttgat |
214 |
Q |
| |
|
| || ||||||||||||||||| | |||||||||||||||||| ||||| || ||||||||||||| | || ||||||||||| |||||||||| |
|
|
| T |
29066911 |
ccaataacattgttgatgcttcaatggctgtgtggaaagccttaggtgtcccaaggaatcaatggggtgggttggatattacatggtctgatgcttgat |
29067009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 155
Target Start/End: Original strand, 29098390 - 29098517
Alignment:
| Q |
28 |
aatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaacaacattg |
127 |
Q |
| |
|
||||||| |||||| ||||||| ||| || |||||| ||||||| |||||| |||||||| |||| |||||||||||||||||||||| |||||||| | |
|
|
| T |
29098390 |
aatggaagaagtgtggtggccatggtagtcgatgagcgtgactctacaatgagatgtgataaagatcatgattaccaacctccttgtcgcaacaacatag |
29098489 |
T |
|
| Q |
128 |
ttgatgcttctaaggctgtgtggaaagc |
155 |
Q |
| |
|
||||||| || |||| ||| ||| |||| |
|
|
| T |
29098490 |
ttgatgcctccaaggttgtatgggaagc |
29098517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 369
Target Start/End: Original strand, 11851662 - 11852020
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11851662 |
attaccataagtgccaatggaagaagtgtggtggccactgtggttgatgagtgtgactctacgatgggatgtgatgaagaacatgattaccaacctcctt |
11851761 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11851762 |
gtccaaacaacattgttgatgcttccaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggccttgacattacatggtcagatgcttg |
11851861 |
T |
|
| Q |
213 |
attgtagaagatgaaatgtg--tgtttgtgttgtaatcattatgtgatagtgtgtactgttatttcttatcttatgtgtattatgtaattgttattacca |
310 |
Q |
| |
|
||||||||||||| |||||| | |||||| |||||| |||||||||||||||||| |||||||| |||||||||| ||||||||| | || ||||| |
|
|
| T |
11851862 |
attgtagaagatgtaatgtgtctttttgtgctgtaatatttatgtgatagtgtgtacatttatttctcatcttatgtggattatgtaaatattgctacca |
11851961 |
T |
|
| Q |
311 |
atgatcattctactgtaaattaagaaaattcaatacatatcccatggttttaaaatgtg |
369 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||| | || ||||||||||||||| |
|
|
| T |
11851962 |
gtgatcattctgttgtaaattaagaaagttaaatacattttccgtggttttaaaatgtg |
11852020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 214
Target Start/End: Original strand, 11854376 - 11854577
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11854376 |
attaccataagtgcgaatggaaaaagtgtggtggccatggttgttgatgagtgtgactccagaaagggatgtgatgaacaacatgattaccaacctcctt |
11854475 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttg |
212 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| || ||||||| |||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11854476 |
gtccaaataacattgttgatgcttccaaggctgtgtggaaagctttaaatgtgcctaaagagcaatggggtggccttgacattacatggtcagatgcttg |
11854575 |
T |
|
| Q |
213 |
at |
214 |
Q |
| |
|
|| |
|
|
| T |
11854576 |
at |
11854577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 11850023 - 11849831
Alignment:
| Q |
22 |
agtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctccttgtccaaaca |
121 |
Q |
| |
|
||||| || |||| |||||| ||||||| || |||||||||||||| || | | ||||| ||| ||||||||||||| |||||||||||| |||| |
|
|
| T |
11850023 |
agtgcgaacggaagaagtgtggtggccaaagttgttgatgagtgtgattcgagagcaggatgcgataaagaacatgattatcaacctccttgtaacaaca |
11849924 |
T |
|
| Q |
122 |
acattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtcagatgcttgat |
214 |
Q |
| |
|
|||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||||| |
|
|
| T |
11849923 |
acatagttgatgcctctaaagctgtgtggaaagccttgggtgtgcctcatgatcaatggggtggattggacattacatggtctgatgcttgat |
11849831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 24241202 - 24241017
Alignment:
| Q |
13 |
attaccataagtgccaatggaaaaagtgtagtggccacggtggttgatgagtgtgactcaacaatgggatgtgatgaagaacatgattaccaacctcctt |
112 |
Q |
| |
|
|||||||| || |||||||| | |||||| ||||||| | | |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
24241202 |
attaccatcagcgccaatggtagaagtgtggtggccatgtttgttgatgagtgtgacttcacaatgggatgtgatgaagagcatgattaccagcctcctt |
24241103 |
T |
|
| Q |
113 |
gtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcctcaagatcaatggggtggcctagacattacatggtca |
204 |
Q |
| |
|
|| ||||||||||| ||||| |||| ||| ||||||||||| ||||||||||| || ||||||||| || || |||||||||||| |
|
|
| T |
24241102 |
gt------aacattgttgaggcttccaaggttgtatggaaagccttaggtgtgcctcatgacaaatggggtgaacttgaaattacatggtca |
24241017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 11654929 - 11655015
Alignment:
| Q |
82 |
tgtgatgaagaacatgattaccaacctccttgtccaaacaacattgttgatgcttctaaggctgtgtggaaagccttgggtgtgcct |
168 |
Q |
| |
|
||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| ||||| ||||| || |||||||||||| |
|
|
| T |
11654929 |
tgtgatgctgaacatgattttcaacctccttgttcaaacaatattgttgatgcttctgctgctgtttggaaggctttgggtgtgcct |
11655015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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