View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1854_low_97 (Length: 236)
Name: NF1854_low_97
Description: NF1854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1854_low_97 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 11023685 - 11023466
Alignment:
| Q |
1 |
aaaatgaatctcctaaagtcagttaccttgaaaatcgagtaaaaagctgtgtggtaaaagaacaggatacaaaaaagtttacccctgaactactttctag |
100 |
Q |
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| T |
11023685 |
aaaatgaatctcctaaagtcagttaccttgaaaatcgagtaaaaagctgtgtggtaaaagaacaggatacaaaaaagtttacccctgaactactttctag |
11023586 |
T |
|
| Q |
101 |
atacactacagagtaaagaagtactagtatatgttgcccaacaatgtctagtcacctgtctgacacatatacgcgattacattcaatcattttaattttc |
200 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
11023585 |
atacactacagagtaaagaagtactagcatatgttgcccaacaatgtctagtcacctgtctgacacatatatgcgattacattcaatcattttaattttc |
11023486 |
T |
|
| Q |
201 |
ttaaattgttatctatgtct |
220 |
Q |
| |
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||||||||||||| |||||| |
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| T |
11023485 |
ttaaattgttatcgatgtct |
11023466 |
T |
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