View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18550_high_8 (Length: 308)
Name: NF18550_high_8
Description: NF18550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18550_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 6 - 292
Target Start/End: Complemental strand, 6866882 - 6866596
Alignment:
| Q |
6 |
tattttattaccaaagatgtattagtattataaaataaaaataattagaaacgacaaaatatttcagaaaagaaacatgcatttgatagtataagacaga |
105 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6866882 |
tattttattaccaaagatgtattagtattataaaatgaaaataattagaaacgacaaaatatttcagaaaagaaacatgcatttgatagtataagacaga |
6866783 |
T |
|
| Q |
106 |
gagagtactctgtcaaaaaataaattatgattcttgtttttgtttttaaactcatgatctagtattgtattgcccaacaccgaatacatgctctatattt |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
6866782 |
gagagtactctgtcaaaaaataaattatgattcttgtttttgtttttaaactcatgatctagtattgtactgcccaacaccgaatacatgctctatattt |
6866683 |
T |
|
| Q |
206 |
cagatccgtgtaatgctcacaagagtttcttgtttatgatgtgttgacctttttgcagacgcagtacctcagtgaaaatcttctaag |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
6866682 |
cagatccgtgtaatgctcacaagagtttcttgtttatgatgtgttgacctttttgcagacgcagtacctctgtgaaaatcttctaag |
6866596 |
T |
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