View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18552_low_19 (Length: 251)
Name: NF18552_low_19
Description: NF18552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18552_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 39849073 - 39849313
Alignment:
| Q |
11 |
caaaggtgacagactcagactcttaggagcccgagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
110 |
Q |
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| T |
39849073 |
caaaggtgacagactcagactcttaggagccagagccagagccagagcctcagcatgtcccgagtctaagtttgtgcacgaggcacaacaggtggaggtt |
39849172 |
T |
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| Q |
111 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgctaaagcttttaaccttgataattcatgtatgcctgcctg |
210 |
Q |
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| T |
39849173 |
cagcaggagtaggcgtcgacacagcctcggaagttacatcctagtggtccgtttgacatgttaaagcttttaaccttgataattcatgtatgcctgcctg |
39849272 |
T |
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| Q |
211 |
tatgataagggtttactctcaccactctagcataaaatcgc |
251 |
Q |
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| T |
39849273 |
tatgataagggtttactctcaccactctaccataaaatcgc |
39849313 |
T |
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