View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18552_low_29 (Length: 222)

Name: NF18552_low_29
Description: NF18552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18552_low_29
NF18552_low_29
[»] chr3 (37 HSPs)
chr3 (18-205)||(28775254-28775438)
chr3 (20-81)||(21564333-21564394)
chr3 (21-72)||(21564680-21564731)
chr3 (21-80)||(20813714-20813773)
chr3 (23-82)||(31122848-31122907)
chr3 (21-72)||(36315245-36315296)
chr3 (21-80)||(47473068-47473127)
chr3 (21-71)||(3696965-3697014)
chr3 (21-71)||(19229234-19229284)
chr3 (21-71)||(21656336-21656386)
chr3 (21-70)||(28699849-28699898)
chr3 (24-72)||(1016890-1016938)
chr3 (24-76)||(1017231-1017283)
chr3 (21-73)||(12748544-12748596)
chr3 (21-73)||(19664357-19664409)
chr3 (21-73)||(21656702-21656754)
chr3 (24-76)||(33151912-33151964)
chr3 (23-75)||(48651062-48651114)
chr3 (21-81)||(49799336-49799396)
chr3 (21-73)||(50364812-50364864)
chr3 (24-71)||(1687498-1687545)
chr3 (25-72)||(8097209-8097256)
chr3 (21-71)||(19268711-19268760)
chr3 (21-75)||(47329447-47329501)
chr3 (21-71)||(51475492-51475541)
chr3 (23-72)||(1448641-1448690)
chr3 (26-71)||(1448981-1449026)
chr3 (26-75)||(20760349-20760398)
chr3 (23-72)||(38446294-38446343)
chr3 (32-77)||(48651443-48651488)
chr3 (24-73)||(50287382-50287431)
chr3 (21-70)||(53196197-53196246)
chr3 (24-80)||(1687838-1687894)
chr3 (21-72)||(10618724-10618776)
chr3 (21-77)||(19268333-19268389)
chr3 (18-70)||(41250736-41250788)
chr3 (20-72)||(53925885-53925937)
[»] chr7 (21 HSPs)
chr7 (24-80)||(47218954-47219010)
chr7 (21-81)||(11476453-11476513)
chr7 (21-80)||(47578985-47579044)
chr7 (24-73)||(43968535-43968584)
chr7 (21-73)||(47281399-47281451)
chr7 (21-72)||(11476829-11476880)
chr7 (21-72)||(30876443-30876494)
chr7 (21-72)||(40520733-40520784)
chr7 (24-71)||(40851130-40851177)
chr7 (24-71)||(42888722-42888769)
chr7 (24-69)||(29739521-29739566)
chr7 (21-74)||(37394270-37394323)
chr7 (24-73)||(39033877-39033926)
chr7 (24-73)||(45723767-45723816)
chr7 (24-73)||(48628992-48629041)
chr7 (24-72)||(1469769-1469817)
chr7 (24-72)||(27772982-27773030)
chr7 (21-73)||(31684378-31684430)
chr7 (24-76)||(37354185-37354237)
chr7 (24-72)||(44544596-44544644)
chr7 (24-72)||(47294197-47294245)
[»] chr1 (24 HSPs)
chr1 (21-77)||(33194572-33194628)
chr1 (21-74)||(36157950-36158003)
chr1 (21-73)||(45670391-45670443)
chr1 (21-72)||(46051634-46051685)
chr1 (21-72)||(49594868-49594919)
chr1 (23-72)||(34971254-34971303)
chr1 (23-71)||(18917343-18917391)
chr1 (32-76)||(36781074-36781118)
chr1 (24-76)||(41105829-41105881)
chr1 (21-80)||(18782362-18782421)
chr1 (24-71)||(19274377-19274424)
chr1 (23-74)||(49094986-49095037)
chr1 (24-78)||(16508175-16508229)
chr1 (21-75)||(34969646-34969700)
chr1 (21-71)||(52146840-52146890)
chr1 (21-67)||(52147177-52147223)
chr1 (24-77)||(24204746-24204799)
chr1 (24-73)||(50690130-50690179)
chr1 (21-73)||(9962935-9962987)
chr1 (23-71)||(21965251-21965299)
chr1 (24-72)||(24204377-24204425)
chr1 (21-73)||(32373825-32373877)
chr1 (21-73)||(38473899-38473951)
chr1 (21-69)||(44978677-44978725)
[»] chr2 (22 HSPs)
chr2 (21-72)||(31214090-31214141)
chr2 (21-76)||(42629798-42629853)
chr2 (21-72)||(42630146-42630197)
chr2 (21-70)||(33865540-33865589)
chr2 (24-80)||(33107245-33107301)
chr2 (21-72)||(41500766-41500817)
chr2 (24-70)||(7379149-7379195)
chr2 (24-70)||(22066668-22066714)
chr2 (24-81)||(920830-920887)
chr2 (24-73)||(23671717-23671766)
chr2 (21-72)||(31187415-31187467)
chr2 (21-72)||(31195475-31195527)
chr2 (24-80)||(36444127-36444182)
chr2 (20-71)||(28216872-28216922)
chr2 (21-72)||(36211231-36211282)
chr2 (21-71)||(771883-771933)
chr2 (24-82)||(37732089-37732147)
chr2 (21-71)||(41500409-41500459)
chr2 (21-78)||(772219-772275)
chr2 (24-73)||(23673149-23673198)
chr2 (24-73)||(28650704-28650753)
chr2 (21-69)||(43249321-43249369)
[»] chr8 (15 HSPs)
chr8 (24-82)||(22684235-22684293)
chr8 (23-74)||(43468907-43468958)
chr8 (24-74)||(440655-440705)
chr8 (20-73)||(24430844-24430897)
chr8 (21-69)||(7435046-7435094)
chr8 (24-72)||(13797275-13797323)
chr8 (21-73)||(15846954-15847006)
chr8 (20-72)||(39295423-39295475)
chr8 (20-75)||(4648964-4649019)
chr8 (25-72)||(9884673-9884720)
chr8 (21-71)||(3875786-3875836)
chr8 (24-72)||(36399975-36400024)
chr8 (21-74)||(43806437-43806490)
chr8 (24-72)||(22683894-22683942)
chr8 (21-73)||(35443495-35443547)
[»] chr5 (32 HSPs)
chr5 (21-71)||(30863100-30863150)
chr5 (23-72)||(39125942-39125991)
chr5 (21-72)||(11001001-11001052)
chr5 (21-75)||(26035269-26035323)
chr5 (21-75)||(28078308-28078362)
chr5 (21-75)||(31710466-31710520)
chr5 (24-78)||(43166536-43166590)
chr5 (21-74)||(6600409-6600462)
chr5 (27-72)||(9919795-9919840)
chr5 (21-74)||(20408717-20408770)
chr5 (21-73)||(8694682-8694734)
chr5 (27-75)||(9919185-9919233)
chr5 (24-72)||(19661907-19661955)
chr5 (21-77)||(30298022-30298078)
chr5 (21-72)||(33003225-33003276)
chr5 (24-74)||(4016149-4016199)
chr5 (21-71)||(11000635-11000685)
chr5 (21-71)||(35342364-35342414)
chr5 (23-73)||(35861480-35861530)
chr5 (24-74)||(38964018-38964068)
chr5 (21-67)||(42263099-42263145)
chr5 (24-73)||(8215716-8215765)
chr5 (24-73)||(11935293-11935342)
chr5 (21-73)||(14717420-14717473)
chr5 (24-73)||(33760746-33760795)
chr5 (26-74)||(1827782-1827830)
chr5 (24-72)||(6251810-6251858)
chr5 (24-72)||(6252159-6252207)
chr5 (21-69)||(8689755-8689803)
chr5 (21-73)||(17002429-17002481)
chr5 (24-72)||(26593556-26593604)
chr5 (21-73)||(27116367-27116419)
[»] chr4 (29 HSPs)
chr4 (21-75)||(17847397-17847451)
chr4 (24-82)||(25734499-25734557)
chr4 (23-74)||(19169041-19169092)
chr4 (20-73)||(5227573-5227626)
chr4 (23-71)||(19496009-19496057)
chr4 (23-75)||(22298333-22298385)
chr4 (21-77)||(22298702-22298758)
chr4 (26-78)||(28160233-28160285)
chr4 (24-72)||(28264489-28264537)
chr4 (23-71)||(28812194-28812242)
chr4 (21-73)||(36444688-36444740)
chr4 (20-76)||(48149682-48149738)
chr4 (21-76)||(2055098-2055153)
chr4 (24-75)||(26017266-26017317)
chr4 (24-71)||(31208566-31208613)
chr4 (21-72)||(36444588-36444639)
chr4 (24-74)||(12196293-12196343)
chr4 (21-75)||(33496398-33496452)
chr4 (24-74)||(50276411-50276461)
chr4 (21-70)||(5227278-5227327)
chr4 (23-72)||(15984833-15984882)
chr4 (24-73)||(28264830-28264879)
chr4 (24-69)||(48707980-48708025)
chr4 (24-76)||(12196656-12196708)
chr4 (21-73)||(30141350-30141402)
chr4 (21-73)||(32118530-32118582)
chr4 (24-72)||(33807687-33807735)
chr4 (23-75)||(37381660-37381712)
chr4 (21-73)||(48551990-48552042)
[»] scaffold0122 (1 HSPs)
scaffold0122 (21-72)||(11182-11233)
[»] chr6 (16 HSPs)
chr6 (21-71)||(30457497-30457547)
chr6 (21-70)||(30378836-30378885)
chr6 (21-73)||(2598005-2598057)
chr6 (24-76)||(17514929-17514981)
chr6 (24-72)||(26393285-26393333)
chr6 (21-73)||(30379201-30379253)
chr6 (21-71)||(29050456-29050507)
chr6 (24-74)||(2390109-2390159)
chr6 (21-71)||(2643932-2643982)
chr6 (21-71)||(9382703-9382753)
chr6 (24-74)||(11133689-11133738)
chr6 (21-71)||(17943220-17943270)
chr6 (21-74)||(3258711-3258764)
chr6 (24-73)||(35224167-35224216)
chr6 (24-72)||(8178155-8178203)
chr6 (21-73)||(17428177-17428229)
[»] scaffold0717 (1 HSPs)
scaffold0717 (21-73)||(2030-2082)
[»] scaffold0338 (1 HSPs)
scaffold0338 (24-76)||(5787-5839)
[»] scaffold0184 (1 HSPs)
scaffold0184 (21-73)||(12911-12963)
[»] scaffold0078 (1 HSPs)
scaffold0078 (21-73)||(59881-59933)


Alignment Details
Target: chr3 (Bit Score: 166; Significance: 5e-89; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 28775438 - 28775254
Alignment:
Q  18 aaaaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaattcatattttgatactacttctacttttgtccatcat 117  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  28775438 aaaaccactttgggaaaaacgtaaaacttaaaagacctttagatgcatttgacctaaattaaattcatattttgatactacttctacttttgtccat--- 28775342  T
Q  118 aagtatatgtctgttaggagaaatttctttgtctcttttacaagaccattcaaattacttgattaacgtacaacgagaagaccattca 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28775341 aagtatatgtctgttaggagaaatttctttgtctcttttacaagaccattcaaattacttgattaacgtacaacgagaagaccattca 28775254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 21564394 - 21564333
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaat 81  Q
    |||||||| |||||||||| |||||||||| || |||| |||||||||||||||||||||||    
T  21564394 aaccacttcgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaattaaat 21564333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 21564680 - 21564731
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  21564680 accactttgggaaaaacgaaaaacttaaaggatctttagatgcatttgacct 21564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 20813714 - 20813773
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    |||||||||||||||||| |||| ||||| || |||| ||||||||||||||||| ||||    
T  20813714 accactttgggaaaaacgaaaaatttaaaggacctttagatgcatttgacctaaaataaa 20813773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 31122848 - 31122907
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaatt 82  Q
    |||||||||||||||| |||| ||||| || |||| |||||||||||||||||| |||||    
T  31122848 cactttgggaaaaacgaaaaagttaaaggacctttagatgcatttgacctaaataaaatt 31122907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 36315245 - 36315296
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  36315245 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 36315296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 47473127 - 47473068
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    ||||||| |||||||||| ||||||||||  |||||| ||||||||||||||||| ||||    
T  47473127 accacttagggaaaaacgaaaaacttaaagaatctttagatgcatttgacctaaaataaa 47473068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 3697014 - 3696965
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  3697014 accactttgggaaaaacgaaaaactt-aaagatctttagatgcatttgacc 3696965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 19229234 - 19229284
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||||||    
T  19229234 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 19229284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 21656386 - 21656336
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  21656386 accactttgggaaaaacaaaaaacttaaaagacctttagatgcatttgacc 21656336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 28699849 - 28699898
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    |||||||||||||||||| ||||||||||||| | || ||||||||||||    
T  28699849 accactttgggaaaaacggaaaacttaaaagacccttagatgcatttgac 28699898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 1016938 - 1016890
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  1016938 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 1016890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 1017231 - 1017283
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||| | ||||||||||||| |||| |||||||||||| |||||    
T  1017231 actttgggaaaaatgaaaaacttaaaagacctttagatgcatttgacttaaat 1017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 12748544 - 12748596
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||| |||||||||||||||||||| || ||||  ||||||||||||||    
T  12748544 accactttaggaaaaacgtaaaacttaaaggacctttaaatgcatttgaccta 12748596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 19664409 - 19664357
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| |||||||| |||||||||| || |||| |||||||||||||||    
T  19664409 accactttgagaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 19664357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 21656702 - 21656754
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||| ||||||| |||||||||| || |||| |||||||||||||||    
T  21656702 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 21656754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 33151912 - 33151964
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||||||    
T  33151912 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacctaaat 33151964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 48651114 - 48651062
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||| |||||||||| ||  ||| |||||||||||||||||    
T  48651114 cactttgggaaaaacgaaaaacttaaaggacatttagatgcatttgacctaaa 48651062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 49799336 - 49799396
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaat 81  Q
    |||||||||||||||||| ||||||| || || |||| ||||||||||||||  |||||||    
T  49799336 accactttgggaaaaacgaaaaactttaaggacctttagatgcatttgacctttattaaat 49799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 50364864 - 50364812
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||| | ||||||||||||| |||| ||| |||||||||||    
T  50364864 accactttgggaaaaatgaaaaacttaaaagacctttagattcatttgaccta 50364812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 1687545 - 1687498
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||    
T  1687545 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 1687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 8097209 - 8097256
Alignment:
Q  25 ctttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||    
T  8097209 ctttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 8097256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 19268711 - 19268760
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| ||||||| ||||| |||| |||||||||||||    
T  19268711 accactttgggaaaaacgaaaaactt-aaagacctttagatgcatttgacc 19268760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 47329447 - 47329501
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||| ||||||| ||||||||||  | |||| |||||||||||||||||    
T  47329447 accactttggaaaaaacgaaaaacttaaagaacctttagatgcatttgacctaaa 47329501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 51475492 - 51475541
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| ||||||| ||||| |||| |||||||||||||    
T  51475492 accactttgggaaaaacgaaaaactt-aaagacctttagatgcatttgacc 51475541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 1448690 - 1448641
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||| |||||||| |||||||||| || |||| ||||||||||||||    
T  1448690 cactttgagaaaaacgaaaaacttaaaggacctttagatgcatttgacct 1448641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1448981 - 1449026
Alignment:
Q  26 tttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||| |||||||||| || |||| |||||||||||||    
T  1448981 tttgggaaaaacggaaaacttaaaggacctttagatgcatttgacc 1449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 20760349 - 20760398
Alignment:
Q  26 tttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    ||||| ||||||| |||||||||| || |||| |||||||||||||||||    
T  20760349 tttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaa 20760398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 38446343 - 38446294
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||| ||||||| |||||||||| || |||| ||||||||||||||    
T  38446343 cactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacct 38446294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 48651443 - 48651488
Alignment:
Q  32 aaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    ||||||| |||||||||||||| ||| ||||||||| |||||||||    
T  48651443 aaaaacgaaaaacttaaaagatttttagatgcatttcacctaaatt 48651488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 50287431 - 50287382
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||| | |||||||||| || |||| |||||||||||||||    
T  50287431 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccta 50287382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 53196197 - 53196246
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    |||||||| ||||||||| |||||||||| || |||| ||||||||||||    
T  53196197 accactttcggaaaaacgaaaaacttaaaggacctttagatgcatttgac 53196246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 1687838 - 1687894
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    |||||| |||||| | |||||||||| || |||| ||||||||||||||||| ||||    
T  1687838 actttgagaaaaatgaaaaacttaaaggacctttagatgcatttgacctaaactaaa 1687894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 10618724 - 10618776
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaa-gatctttggatgcatttgacct 72  Q
    |||||||| ||||||||| ||||||||||| || |||| ||||||||||||||    
T  10618724 accactttaggaaaaacgaaaaacttaaaaggacctttagatgcatttgacct 10618776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 19268389 - 19268333
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    |||||||||  ||||||| |||||||||| ||| ||| |||| ||||||||||||||    
T  19268389 accactttgttaaaaacgaaaaacttaaaggatttttagatgtatttgacctaaatt 19268333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 41250788 - 41250736
Alignment:
Q  18 aaaaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    ||||| |||||| |||||||| |||||||||| || |||| ||||||||||||    
T  41250788 aaaacgactttgagaaaaacgaaaaacttaaaggacctttagatgcatttgac 41250736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 53925937 - 53925885
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||||| | |||||||||| || |||| ||| ||||||||||    
T  53925937 aaccactttgggaaaaatgaaaaacttaaatgacctttagatacatttgacct 53925885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 47219010 - 47218954
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||    
T  47219010 actttgggaaaaacgtaaaacttaaaggacctttagatgcatttgacctaaactaaa 47218954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 11476513 - 11476453
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaat 81  Q
    |||||||||||||||||  |||||||||| || |||| ||||||||||||||||| |||||    
T  11476513 accactttgggaaaaacaaaaaacttaaaggacctttagatgcatttgacctaaaataaat 11476453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 47579044 - 47578985
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    ||||||||| |||||| | |||||||||| |||| || ||||||||||||||||||||||    
T  47579044 accactttgagaaaaatgaaaaacttaaaggatcattagatgcatttgacctaaattaaa 47578985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 43968535 - 43968584
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||||    
T  43968535 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 43968584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 47281399 - 47281451
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||| ||||||| |||||||||| || |||| |||||||||||||||    
T  47281399 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 47281451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 11476829 - 11476880
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||| ||||||||| |||||||||| || |||| ||||||||||||||    
T  11476829 accactttaggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 11476880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 30876443 - 30876494
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || ||||  |||||||||||||    
T  30876443 accactttgggaaaaacgaaaaacttaaaggacctttaaatgcatttgacct 30876494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 40520784 - 40520733
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||| ||||||| |||| ||||||||||||| |||| |||||||||    
T  40520784 accactttggaaaaaacgaaaaatttaaaagatctttagatgtatttgacct 40520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 40851177 - 40851130
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||    
T  40851177 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 40851130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 42888769 - 42888722
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||    
T  42888769 actttgggaaaaacgaaaaacttaaatgacctttagatgcatttgacc 42888722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 29739566 - 29739521
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||    
T  29739566 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttga 29739521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 37394270 - 37394323
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||||||||||| ||||||||||  | |||| ||||||||| ||||||    
T  37394270 accactttgggaaaaacgaaaaacttaaagaacctttagatgcatttaacctaa 37394323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 39033926 - 39033877
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||| |||||||| |||||||||| || |||| |||||||||||||||    
T  39033926 actttgagaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 39033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 45723767 - 45723816
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||| |||||||| |||||||||| |||||||  ||||||||||||||    
T  45723767 actttgagaaaaacgaaaaacttaaatgatctttaaatgcatttgaccta 45723816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 48628992 - 48629041
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||| | |||||||||| || |||| |||||||||||||||    
T  48628992 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccta 48629041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 1469769 - 1469817
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||| |||||||||| ||  ||| ||||||||||||||    
T  1469769 actttgggaaaaacgaaaaacttaaaggacatttagatgcatttgacct 1469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 27773030 - 27772982
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||  |||||||||| || |||| ||||||||||||||    
T  27773030 actttgggaaaaactaaaaacttaaaggacctttagatgcatttgacct 27772982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 31684378 - 31684430
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||| ||||| | |||||||||| || |||| |||||||||||||||    
T  31684378 accactttggaaaaaatgcaaaacttaaaggacctttagatgcatttgaccta 31684430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 37354237 - 37354185
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||||| |||||||||| ||  ||| ||||||| ||||||||||    
T  37354237 actttgggaaaaacgaaaaacttaaaggacttttagatgcatatgacctaaat 37354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 44544596 - 44544644
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| ||||||| ||| ||||||||||    
T  44544596 actttgggaaaaatgaaaaacttaaaggatctttagatacatttgacct 44544644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 47294245 - 47294197
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||    
T  47294245 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacct 47294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 33194628 - 33194572
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    |||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||    
T  33194628 accactttgggaaaaacgaaaaacttaaaggatcttcagatgcatttgacctaaatt 33194572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 36157950 - 36158003
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||||    
T  36157950 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 36158003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 45670443 - 45670391
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  45670443 accactttggaaaaaacgaaaaacttaaaggatctttagatgcatttgaccta 45670391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 46051634 - 46051685
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  46051634 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 46051685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 49594919 - 49594868
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  49594919 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 49594868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 34971254 - 34971303
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  34971254 cactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 34971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 18917391 - 18917343
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||| |||||||| |||||||||| ||||||| |||||||||||||    
T  18917391 cactttgagaaaaacgaaaaacttaaaggatctttagatgcatttgacc 18917343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 36781118 - 36781074
Alignment:
Q  32 aaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||    
T  36781118 aaaaacgaaaaacttaaaagacctttagatgcatttgacctaaat 36781074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 41105881 - 41105829
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||| ||||    
T  41105881 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccaaaat 41105829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 18782362 - 18782421
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    |||||||||||||||||| |||||||||| ||  ||| ||||||||||||| ||| ||||    
T  18782362 accactttgggaaaaacgaaaaacttaaaggacttttagatgcatttgaccaaaaataaa 18782421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 19274424 - 19274377
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||    
T  19274424 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 19274377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 49094986 - 49095037
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||| ||||||||| ||||||||||  | |||||||||||||||||||||    
T  49094986 cactttaggaaaaacgaaaaacttaaagaacctttggatgcatttgacctaa 49095037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 16508175 - 16508229
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatta 78  Q
    ||||||||||||||  |||||||||| || |||| ||||||||||||||| ||||    
T  16508175 actttgggaaaaactaaaaacttaaaggacctttagatgcatttgacctatatta 16508229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 34969700 - 34969646
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||||| |||||||||| || ||||  ||| ||||||||||||    
T  34969700 accactttgggaaaaacgaaaaacttaaaggacctttatatgtatttgacctaaa 34969646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 52146890 - 52146840
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| |||||||||| ||  ||| |||||||||||||    
T  52146890 accactttgggaaaaacgaaaaacttaaaggacatttagatgcatttgacc 52146840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 52147177 - 52147223
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcattt 67  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||    
T  52147177 accactttgggaaaaacgaaaaacttaaaggacctttagatgcattt 52147223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 24204746 - 24204799
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    ||||||| ||||||| |||||||||| || |||| ||||||||||||| |||||    
T  24204746 actttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccaaaatt 24204799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 50690130 - 50690179
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||| | ||||||||||||| |||| ||||||||| |||||    
T  50690130 actttgggaaaaatgaaaaacttaaaagacctttagatgcatttaaccta 50690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 9962935 - 9962987
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| |||||||| |||||||||| || ||||  ||||||||||||||    
T  9962935 accactttgagaaaaacgaaaaacttaaaggacctttaaatgcatttgaccta 9962987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 21965251 - 21965299
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||| |||||||||| || |||| |||| ||||||||    
T  21965251 cactttgggaaaaacgaaaaacttaaaggacctttagatgtatttgacc 21965299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 24204425 - 24204377
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||    
T  24204425 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacct 24204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 32373825 - 32373877
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||  ||||||  |||||||||| ||||||| |||||||||||||||    
T  32373825 accactttgaaaaaaacaaaaaacttaaaggatctttagatgcatttgaccta 32373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 38473899 - 38473951
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| |||||||| |||||||||| ||  ||| |||||||||||||||    
T  38473899 accactttgagaaaaacgaaaaacttaaaggacatttagatgcatttgaccta 38473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 44978725 - 44978677
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    |||||||||||||||||| |||||||||| || ||||  ||||||||||    
T  44978725 accactttgggaaaaacgaaaaacttaaaggacctttaaatgcatttga 44978677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 31214090 - 31214141
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  31214090 accactttgggaaaaacgaaaaacttaaaagacctttagatgcatttgacct 31214141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 42629853 - 42629798
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||    
T  42629853 accactttgagaaaaacgaaaaacttaaaggatctttagatgcatttgacctaaat 42629798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 42630146 - 42630197
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  42630146 accactttgggaaaaacgaaaaacttaaaagacctttagatgcatttgacct 42630197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 33865540 - 33865589
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  33865540 accactttgggaaaaacgaaaaacttaaaagacctttagatgcatttgac 33865589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 33107245 - 33107301
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    ||||||||||||||| |||||||||| || ||||  |||||||||||||||||||||    
T  33107245 actttgggaaaaacgaaaaacttaaaggacctttaaatgcatttgacctaaattaaa 33107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 41500766 - 41500817
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  41500766 accactttgggaaaaacgaaaaacttaaatgacctttagatgcatttgacct 41500817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 7379149 - 7379195
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  7379149 actttggaaaaaacgaaaaacttaaaagatctttagatgcatttgac 7379195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 22066668 - 22066714
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  22066668 actttaggaaaaacgaaaaacttaaaagatctttagatgcatttgac 22066714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 920887 - 920830
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaat 81  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||| || |||||    
T  920887 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccttaaataaat 920830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 23671766 - 23671717
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||||    
T  23671766 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 23671717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 31187415 - 31187467
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaa-gatctttggatgcatttgacct 72  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  31187415 accactttgggaaaaacgaaaaacttaaaaggacctttagatgcatttgacct 31187467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 31195475 - 31195527
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaa-gatctttggatgcatttgacct 72  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  31195475 accactttgggaaaaacgaaaaacttaaaaggacctttagatgcatttgacct 31195527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 36444182 - 36444127
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaa 80  Q
    ||||||| ||||| | |||||||||||||||||| ||||||||||||| ||||||||    
T  36444182 actttggaaaaaatgaaaaacttaaaagatctttagatgcatttgacc-aaattaaa 36444127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 28216922 - 28216872
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||||||| ||||||| ||||||||||  ||||||||||||    
T  28216922 aaccactttgggaaaaacgaaaaactt-aaagatctttaaatgcatttgacc 28216872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 36211231 - 36211282
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||| ||||||| |||||||||| || |||| ||||||||||||||    
T  36211231 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacct 36211282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 771933 - 771883
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||| | |||||||||| || |||| |||||||||||||    
T  771933 accactttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacc 771883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 37732147 - 37732089
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaatt 82  Q
    ||||||||||||| | |||||||||| || |||| |||||||||||||| || ||||||    
T  37732147 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccttaaataaatt 37732089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 41500459 - 41500409
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||| | |||||||||| || |||| |||||||||||||    
T  41500459 accactttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacc 41500409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 772219 - 772275
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatta 78  Q
    |||||||||||||||||| ||||||| |||||  ||| ||||||||||||||| ||||    
T  772219 accactttgggaaaaacgaaaaactt-aaagacatttagatgcatttgacctatatta 772275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 23673149 - 23673198
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| ||  ||| |||||||||||||||    
T  23673149 actttgggaaaaacgaaaaacttaaaggacttttagatgcatttgaccta 23673198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28650704 - 28650753
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| || ||||  ||||||||||||||    
T  28650704 actttgggaaaaacgaaaaacttaaaggacctttaaatgcatttgaccta 28650753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 43249369 - 43249321
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    |||||||||||||||| | |||||||||| || |||| |||||||||||    
T  43249369 accactttgggaaaaatgaaaaacttaaaggacctttagatgcatttga 43249321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 22684235 - 22684293
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaatt 82  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||| ||||||||||    
T  22684235 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccaaaattaaatt 22684293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 43468958 - 43468907
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||||||||| |||||||||| || |||| ||||||||||||||||    
T  43468958 cactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 43468907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 440705 - 440655
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||||||| |||||||||| ||||||| |||| |||||||||||    
T  440705 actttgggaaaaacgaaaaacttaaaggatctttagatgtatttgacctaa 440655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 24430844 - 24430897
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| ||||||||| |||||||||| || |||| |||||||||||||||    
T  24430844 aaccactttaggaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 24430897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 7435046 - 7435094
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||||    
T  7435046 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttga 7435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 13797275 - 13797323
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | ||||||||||||| |||| ||||||||||||||    
T  13797275 actttgggaaaaatgaaaaacttaaaagacctttagatgcatttgacct 13797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15847006 - 15846954
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| | |||||||| || |||| |||||||||||||||    
T  15847006 accactttgggaaaaacgaacaacttaaaggacctttagatgcatttgaccta 15846954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 39295423 - 39295475
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||||||| ||||||||||||| |||| |||| |||| ||||    
T  39295423 aaccactttgggaaaaacgaaaaacttaaaagacctttagatgtatttaacct 39295475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 4649019 - 4648964
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    ||||||||||| ||||||| |||||||||| ||  ||| |||||||||||||||||    
T  4649019 aaccactttggaaaaaacgaaaaacttaaaggacttttagatgcatttgacctaaa 4648964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 9884720 - 9884673
Alignment:
Q  25 ctttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||| |||||||||| || |||| ||||||||||||||    
T  9884720 ctttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 9884673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 3875836 - 3875786
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||| ||||||| |||||||||| || |||| |||||||||||||    
T  3875836 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacc 3875786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 36400024 - 36399975
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaa-gatctttggatgcatttgacct 72  Q
    ||||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  36400024 actttgggaaaaacgaaaaacttaaaaggacctttagatgcatttgacct 36399975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 43806490 - 43806437
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||  |||||||| |||||||||| || ||||| |||||||||||||||    
T  43806490 accactttaagaaaaacgaaaaacttaaaggacctttgaatgcatttgacctaa 43806437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 22683942 - 22683894
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||    
T  22683942 actttgggaaaaatgaaaaacttaaaggagctttagatgcatttgacct 22683894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35443495 - 35443547
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||| | ||| |||||| || |||| |||||||||||||||    
T  35443495 accactttgggaaaaatgaaaatcttaaaggacctttagatgcatttgaccta 35443547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 30863150 - 30863100
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  30863150 accactttgggaaaaacgaaaaacttaaaagacctttagatgcatttgacc 30863100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 39125991 - 39125942
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  39125991 cactttgggaaaaacgaaaaacttaaaggatctttagatgcatttgacct 39125942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 11001001 - 11001052
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  11001001 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 11001052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 26035323 - 26035269
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||| ||||||| |||||||||| || |||| |||||||||||||||||    
T  26035323 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaa 26035269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 28078362 - 28078308
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||| ||||||  ||||||||||||| |||| |||||||||||||||||    
T  28078362 accactttggaaaaaacaaaaaacttaaaagacctttagatgcatttgacctaaa 28078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 31710466 - 31710520
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||||  |||||||||| ||||||| ||||||||||| |||||    
T  31710466 accactttgggaaaaactaaaaacttaaaggatctttagatgcatttgatctaaa 31710520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 43166536 - 43166590
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatta 78  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||||| ||||||    
T  43166536 actttgggaaaaacgaaaaacttaaaagacctttagatacatttgaccaaaatta 43166590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6600409 - 6600462
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||| ||||||| |||||||||| || |||| ||||||||||||||||    
T  6600409 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 6600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 9919795 - 9919840
Alignment:
Q  27 ttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||| |||||||||| || |||||||||||||||||||    
T  9919795 ttgggaaaaacgaaaaacttaaaggacctttggatgcatttgacct 9919840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 20408717 - 20408770
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||| ||||||||||||| |||||||||| || |||| ||||||||||||||||    
T  20408717 accattttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 20408770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 8694734 - 8694682
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||| | ||||||||||||| ||||  ||||||||||||||    
T  8694734 accactttgggaaaaatgcaaaacttaaaagaactttaaatgcatttgaccta 8694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 9919233 - 9919185
Alignment:
Q  27 ttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  9919233 ttgggaaaaacgaaaaatttaaaggacctttggatgcatttgacctaaa 9919185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 19661907 - 19661955
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  19661907 actttgggaaaaacgaaaaacttaaacgacctttagatgcatttgacct 19661955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 30298022 - 30298078
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    |||||||||| ||||||| |||||||||| ||  ||| |||||||||||||||||||    
T  30298022 accactttggaaaaaacgaaaaacttaaatgacttttagatgcatttgacctaaatt 30298078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 33003225 - 33003276
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||| ||||||||| |||||||||| || |||| ||||||||||||||    
T  33003225 accactttaggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 33003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 4016149 - 4016199
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||||||| | |||||||| || |||| ||||||||||||||||    
T  4016149 actttgggaaaaacgaataacttaaaggacctttagatgcatttgacctaa 4016199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 11000685 - 11000635
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| |||||||||| || |||  |||||||||||||    
T  11000685 accactttgggaaaaacgaaaaacttaaaggaccttaagatgcatttgacc 11000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 35342364 - 35342414
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||| | |||||||||| || |||| |||||||||||||    
T  35342364 accactttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacc 35342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 35861480 - 35861530
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||| ||||||| |||||||||| || |||| |||||||||||||||    
T  35861480 cactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 35861530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 38964068 - 38964018
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||||    
T  38964068 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacctaa 38964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 42263099 - 42263145
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcattt 67  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||    
T  42263099 accactttgggaaaaacgaaaaacttaaaggacctttagatgcattt 42263145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 8215765 - 8215716
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||| | |||||||||| || |||| |||||||||||||||    
T  8215765 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccta 8215716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 11935342 - 11935293
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||| ||||||| |||||||||| || |||| |||||||||||||||    
T  11935342 actttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 14717473 - 14717420
Alignment:
Q  21 accactttgggaaaaacgtaaaa-cttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| |||| |||||| || |||| |||||||||||||||    
T  14717473 accactttgggaaaaacgaaaaaacttaaaggacctttagatgcatttgaccta 14717420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 33760746 - 33760795
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| ||  ||| |||||||||||||||    
T  33760746 actttgggaaaaacgaaaaacttaaaggacttttagatgcatttgaccta 33760795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 1827830 - 1827782
Alignment:
Q  26 tttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||| | |||||||||| |||||||  |||||||||||||||    
T  1827830 tttgggaaaaatgaaaaacttaaaggatctttaaatgcatttgacctaa 1827782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 6251858 - 6251810
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||| ||||||| | |||||||||| || |||||||||||||||||||    
T  6251858 actttcggaaaaatgaaaaacttaaaggacctttggatgcatttgacct 6251810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 6252159 - 6252207
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||    
T  6252159 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgacct 6252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 8689755 - 8689803
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    |||||||||||||||||| ||||||||||  | |||| |||||||||||    
T  8689755 accactttgggaaaaacgaaaaacttaaagaacctttagatgcatttga 8689803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 17002429 - 17002481
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||  ||||||| |||||||||| || |||| |||||||||||||||    
T  17002429 accactttgaaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 17002481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 26593556 - 26593604
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||| ||||||| |||||||||| || |||| ||||||||||||||    
T  26593556 actttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacct 26593604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27116367 - 27116419
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||  |||||||||| ||  ||| |||||||||||||||    
T  27116367 accactttgggaaaaacaaaaaacttaaaggacttttagatgcatttgaccta 27116419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 17847397 - 17847451
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||||||||||    
T  17847397 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaa 17847451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 25734499 - 25734557
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaattaaatt 82  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||| ||||||||||    
T  25734499 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgaccaaaattaaatt 25734557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 19169041 - 19169092
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||||||||| |||||||||| || |||| ||||||||||||||||    
T  19169041 cactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 19169092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 5227573 - 5227626
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||| ||||||| |||||||||| || |||| |||||||||||||||    
T  5227573 aaccactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 5227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 19496057 - 19496009
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||| | ||||||||||||| |||| |||||||||||||    
T  19496057 cactttgggaaaaatgaaaaacttaaaagaactttagatgcatttgacc 19496009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 22298385 - 22298333
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||| ||||||| |||||||||| || |||| |||||||||||||||||    
T  22298385 cactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaa 22298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 22298702 - 22298758
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatt 77  Q
    |||||||||||||||||| |||||||||| ||  ||| |||||||||||||| ||||    
T  22298702 accactttgggaaaaacgaaaaacttaaaggacatttagatgcatttgaccttaatt 22298758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 28160233 - 28160285
Alignment:
Q  26 tttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaatta 78  Q
    ||||||||||||| |||||||||| || |||| ||||||||||||||| ||||    
T  28160233 tttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacctacatta 28160285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 28264537 - 28264489
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  28264537 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 28264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 28812242 - 28812194
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||| |||||||||| || |||| |||||||||||||    
T  28812242 cactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 28812194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 36444688 - 36444740
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| |||||||||| ||  ||| |||||||||||||||    
T  36444688 accactttgggaaaaacgaaaaacttaaaggacatttagatgcatttgaccta 36444740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 48149682 - 48149738
Alignment:
Q  20 aaccactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||| ||||||| |||||||||| || |||| ||||||||| ||||||||    
T  48149682 aaccactttggaaaaaacgaaaaacttaaaggacctttagatgcatttcacctaaat 48149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 2055153 - 2055098
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    |||||||||  ||||||| |||||||||| || |||| ||||||||||||||||||    
T  2055153 accactttgaaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaat 2055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 26017317 - 26017266
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    ||||||| ||||||| |||||||||| || |||| |||||||||||||||||    
T  26017317 actttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaaa 26017266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 31208613 - 31208566
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    ||||||||||||||| |||||||||| || |||| |||||||||||||    
T  31208613 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 31208566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 36444639 - 36444588
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||| ||||||| |||||||||| || |||| ||||||||||||||    
T  36444639 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacct 36444588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 12196343 - 12196293
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||||||| |||||||||| || ||||  |||||||||||||||    
T  12196343 actttgggaaaaacgaaaaacttaaaggacctttaaatgcatttgacctaa 12196293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 33496398 - 33496452
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||||| |||||||||  || |||| ||||||||| |||||||    
T  33496398 accactttgggaaaaacgaaaaacttaagggacctttagatgcatttaacctaaa 33496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 50276411 - 50276461
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||| ||||||| |||||||||| || |||| ||||||||||||||||    
T  50276411 actttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacctaa 50276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 5227327 - 5227278
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    |||||||||| ||||||| |||||||||| ||||| | ||||||||||||    
T  5227327 accactttggaaaaaacgaaaaacttaaaggatctgtagatgcatttgac 5227278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 15984882 - 15984833
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||| |||||||| |||| |||| ||| ||||||||||    
T  15984882 cactttgggaaaaacgaaaaacttagaagacctttagatacatttgacct 15984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28264830 - 28264879
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||| | |||||||||| || |||| |||||||||||||||    
T  28264830 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccta 28264879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 48707980 - 48708025
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttga 69  Q
    |||||| |||||||| |||||||||| ||||||| |||||||||||    
T  48707980 actttgagaaaaacgaaaaacttaaaggatctttagatgcatttga 48708025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 12196656 - 12196708
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||| | |||||||||| || |||| ||||||||| ||||||||    
T  12196656 actttgggaaaaatgaaaaacttaaaggacctttagatgcatttcacctaaat 12196708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 30141350 - 30141402
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||| | ||||||| |||||||||| || |||| |||||||||||||||    
T  30141350 accactttagaaaaaacgaaaaacttaaaggacctttagatgcatttgaccta 30141402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 32118582 - 32118530
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| |||||||||| || | || |||| ||||||||||    
T  32118582 accactttgggaaaaacgaaaaacttaaaggaccattagatgtatttgaccta 32118530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 33807735 - 33807687
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||| | |||||||||| || |||| ||||||||||||||    
T  33807735 actttgggaaaaatgaaaaacttaaatgacctttagatgcatttgacct 33807687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 37381712 - 37381660
Alignment:
Q  23 cactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaa 75  Q
    |||||||||||||||| |||||||||| || |||| |||  ||||||||||||    
T  37381712 cactttgggaaaaacgaaaaacttaaaggacctttagataaatttgacctaaa 37381660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 48551990 - 48552042
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||| ||||||| ||||||||||  | |||| |||||||||||||||    
T  48551990 accactttggaaaaaacgaaaaacttaaagaacctttagatgcatttgaccta 48552042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 11233 - 11182
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  11233 accactttgggaaaaacgaaaaacttaaaagacttttagatgcatttgacct 11182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 30457497 - 30457547
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||| |||||||||| || |||| |||||||||||||    
T  30457497 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacc 30457547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 30378885 - 30378836
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgac 70  Q
    |||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  30378885 accactttgggaaaaacgaaaaacttaaaggacctttagatgcatttgac 30378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 2598057 - 2598005
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||| | |||||||||| || |||| |||||||||||||||    
T  2598057 accactttgggaaaaatgaaaaacttaaaggacctttagatgcatttgaccta 2598005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 17514981 - 17514929
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||||||| ||||    
T  17514981 actttgggaaaaacgaaaaacttaaagtatctttagatgcatttgaccaaaat 17514929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 26393285 - 26393333
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    ||||||||||||||| |||||||||| || |||| ||||||||||||||    
T  26393285 actttgggaaaaacgaaaaacttaaaggacctttagatgcatttgacct 26393333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 30379201 - 30379253
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| |||||||||| || |||| ||| |||||||||||    
T  30379201 accactttgggaaaaacgaaaaacttaaaggacctttagatacatttgaccta 30379253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 29050456 - 29050507
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaa-gatctttggatgcatttgacc 71  Q
    |||||||||||||||||| ||||||||||| || |||| |||||||||||||    
T  29050456 accactttgggaaaaacgaaaaacttaaaaggacctttagatgcatttgacc 29050507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 2390159 - 2390109
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||| | ||||| ||||||||||||| |||| ||||||||||||||||    
T  2390159 actttggaataaacgaaaaacttaaaagacctttagatgcatttgacctaa 2390109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 2643982 - 2643932
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||| ||||||| |||||||||| || |||| |||||||||||||    
T  2643982 accactttggaaaaaacgaaaaacttaaaggacctttagatgcatttgacc 2643932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 9382703 - 9382753
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||  |||||||||| || |||| |||||||||||||    
T  9382703 accactttgggaaaaacaaaaaacttaaaggacctttagatgcatttgacc 9382753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 11133738 - 11133689
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    ||||||||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  11133738 actttgggaaaaacgaaaaatttaaa-gatctttagatgcatttgacctaa 11133689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 17943220 - 17943270
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacc 71  Q
    |||||||||||||||||  |||||||||| || |||| |||||||||||||    
T  17943220 accactttgggaaaaacaaaaaacttaaaggacctttagatgcatttgacc 17943270  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 3258764 - 3258711
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaa 74  Q
    |||||||||| ||||||| |||||||||| || ||||  |||||||||||||||    
T  3258764 accactttggaaaaaacgaaaaacttaaaggacctttatatgcatttgacctaa 3258711  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 35224167 - 35224216
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||||||||| |||||||||| ||  ||| |||||||||||||||    
T  35224167 actttgggaaaaacgaaaaacttaaaggacttttagatgcatttgaccta 35224216  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 8178203 - 8178155
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacct 72  Q
    |||||| |||||| | |||||||||| || |||||||||||||||||||    
T  8178203 actttgagaaaaatgaaaaacttaaaggacctttggatgcatttgacct 8178155  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 17428229 - 17428177
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||| | ||||||| ||||||||||  |||||| |||||||||||||||    
T  17428229 accactttagaaaaaacgaaaaacttaaagaatctttagatgcatttgaccta 17428177  T

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Target: scaffold0717 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 2030 - 2082
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    |||||||||||||||||| |||| ||||| || |||| |||||||||||||||    
T  2030 accactttgggaaaaacgaaaaatttaaaggaccttttgatgcatttgaccta 2082  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 5787 - 5839
Alignment:
Q  24 actttgggaaaaacgtaaaacttaaaagatctttggatgcatttgacctaaat 76  Q
    ||||||||||||||  |||||||||| || |||| ||||||||||||| ||||    
T  5787 actttgggaaaaactaaaaacttaaaggacctttagatgcatttgaccaaaat 5839  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 12963 - 12911
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| |||||||| |||||||||| || ||||  ||||||||||||||    
T  12963 accactttgagaaaaacgaaaaacttaaaggacctttaaatgcatttgaccta 12911  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 59881 - 59933
Alignment:
Q  21 accactttgggaaaaacgtaaaacttaaaagatctttggatgcatttgaccta 73  Q
    ||||||||| |||||||| |||||||||| || ||||  ||||||||||||||    
T  59881 accactttgagaaaaacgaaaaacttaaaggacctttaaatgcatttgaccta 59933  T

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