View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18554_high_13 (Length: 219)
Name: NF18554_high_13
Description: NF18554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18554_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 26863336 - 26863123
Alignment:
| Q |
1 |
ctgtttcaagcttacttttggcataccatttaagcttacccctcagagctgttcttatagttgtcggtagcttattgtaaagatcgtctcttgttcgaac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
26863336 |
ctgtttcaagcttacttttggcataccatttaagcttacccctcagagctgttcttatagttgtcggtagcttattgtaaagatcgtctctcgttcgaac |
26863237 |
T |
|
| Q |
101 |
attgattgtattcgtgcgacgtgatgacactatcttctctatcaatacaattacatttgcataatgtatagctaaagctgcatcaccaagagttgatgga |
200 |
Q |
| |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26863236 |
atcgattgtattcgtgcgacgtgatgacactatcttctctatcaatacaattacatttgcataatgtatagctaaagctgcatcaccaagagttgatgga |
26863137 |
T |
|
| Q |
201 |
atcggttttaactt |
214 |
Q |
| |
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|||||||||||||| |
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|
| T |
26863136 |
atcggttttaactt |
26863123 |
T |
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