View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18554_low_11 (Length: 250)

Name: NF18554_low_11
Description: NF18554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18554_low_11
NF18554_low_11
[»] chr3 (30 HSPs)
chr3 (8-236)||(21098302-21098533)
chr3 (8-236)||(12264198-12264429)
chr3 (8-236)||(38653927-38654158)
chr3 (8-236)||(43363611-43363842)
chr3 (8-236)||(49672560-49672791)
chr3 (8-237)||(1941719-1941951)
chr3 (8-236)||(34121353-34121584)
chr3 (8-236)||(3898420-3898651)
chr3 (8-236)||(49506349-49506580)
chr3 (8-237)||(54073025-54073260)
chr3 (25-236)||(26948816-26949027)
chr3 (25-237)||(4584433-4584645)
chr3 (25-236)||(20671267-20671478)
chr3 (25-236)||(36076454-36076665)
chr3 (52-236)||(40014653-40014837)
chr3 (25-234)||(31488429-31488638)
chr3 (25-234)||(39146458-39146667)
chr3 (8-236)||(45557884-45558115)
chr3 (25-237)||(49478226-49478438)
chr3 (25-231)||(55041588-55041800)
chr3 (25-194)||(24119225-24119394)
chr3 (82-204)||(26051334-26051457)
chr3 (130-236)||(6460168-6460273)
chr3 (25-74)||(26052240-26052289)
chr3 (192-227)||(37099729-37099764)
chr3 (196-227)||(53556920-53556951)
chr3 (195-224)||(5561565-5561594)
chr3 (192-236)||(13364022-13364066)
chr3 (200-236)||(20370358-20370394)
chr3 (200-236)||(25437286-25437322)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-236)||(46272-46503)
[»] chr8 (41 HSPs)
chr8 (8-236)||(15961130-15961361)
chr8 (8-236)||(30473884-30474115)
chr8 (8-236)||(6299020-6299251)
chr8 (8-236)||(10477935-10478166)
chr8 (8-236)||(18997698-18997929)
chr8 (8-236)||(32110861-32111092)
chr8 (8-236)||(44832186-44832417)
chr8 (8-236)||(995815-996046)
chr8 (8-236)||(18175379-18175610)
chr8 (25-236)||(11725208-11725419)
chr8 (25-236)||(28582873-28583084)
chr8 (25-236)||(35122322-35122533)
chr8 (25-236)||(18841922-18842133)
chr8 (25-236)||(44836927-44837138)
chr8 (42-236)||(39997726-39997920)
chr8 (25-234)||(18568883-18569092)
chr8 (25-236)||(24408894-24409105)
chr8 (25-212)||(39257461-39257648)
chr8 (25-231)||(11142479-11142691)
chr8 (25-213)||(40026818-40027006)
chr8 (25-234)||(28274217-28274425)
chr8 (32-204)||(18210656-18210828)
chr8 (25-184)||(19240681-19240840)
chr8 (25-184)||(19313865-19314024)
chr8 (25-197)||(19412849-19413022)
chr8 (25-184)||(24004779-24004938)
chr8 (25-125)||(23353688-23353788)
chr8 (97-204)||(25875322-25875424)
chr8 (178-236)||(23353622-23353680)
chr8 (189-237)||(19241008-19241056)
chr8 (189-237)||(19314192-19314240)
chr8 (25-74)||(25875461-25875510)
chr8 (171-227)||(405363-405419)
chr8 (25-67)||(18481929-18481971)
chr8 (192-227)||(17695618-17695653)
chr8 (192-227)||(44831143-44831178)
chr8 (195-236)||(34815244-34815285)
chr8 (199-236)||(40169720-40169757)
chr8 (200-236)||(5769490-5769526)
chr8 (200-236)||(11071961-11071997)
chr8 (200-236)||(24471872-24471908)
[»] chr7 (25 HSPs)
chr7 (8-236)||(21804572-21804803)
chr7 (8-236)||(38163339-38163570)
chr7 (8-236)||(42242154-42242385)
chr7 (8-236)||(31373454-31373685)
chr7 (8-236)||(33916947-33917178)
chr7 (13-236)||(3840641-3840867)
chr7 (8-236)||(21341821-21342052)
chr7 (8-236)||(27138528-27138759)
chr7 (25-236)||(21669999-21670210)
chr7 (25-236)||(16376545-16376756)
chr7 (8-236)||(17178237-17178469)
chr7 (25-236)||(40968909-40969120)
chr7 (25-236)||(13786188-13786399)
chr7 (25-236)||(21656646-21656857)
chr7 (25-234)||(43933546-43933755)
chr7 (25-241)||(15109660-15109876)
chr7 (25-222)||(24924097-24924294)
chr7 (32-236)||(27903417-27903621)
chr7 (42-212)||(39030276-39030446)
chr7 (25-204)||(21753524-21753703)
chr7 (192-227)||(31097897-31097932)
chr7 (175-236)||(13765318-13765379)
chr7 (200-236)||(11001324-11001360)
chr7 (171-224)||(32661033-32661086)
chr7 (8-55)||(31096698-31096748)
[»] chr6 (30 HSPs)
chr6 (8-236)||(12597265-12597496)
chr6 (8-236)||(28099597-28099828)
chr6 (8-234)||(19997663-19997892)
chr6 (8-236)||(33645940-33646171)
chr6 (8-236)||(2266766-2267005)
chr6 (25-236)||(13533785-13533996)
chr6 (25-236)||(3592911-3593122)
chr6 (25-236)||(17202450-17202661)
chr6 (25-237)||(10584727-10584939)
chr6 (25-236)||(15044740-15044951)
chr6 (25-236)||(2005446-2005657)
chr6 (111-236)||(1405563-1405688)
chr6 (25-169)||(17594834-17594979)
chr6 (25-133)||(8539618-8539726)
chr6 (8-134)||(25448747-25448876)
chr6 (97-200)||(33035523-33035626)
chr6 (177-236)||(8539723-8539782)
chr6 (195-236)||(162669-162710)
chr6 (171-236)||(6300709-6300774)
chr6 (171-236)||(6307519-6307584)
chr6 (171-227)||(8657073-8657129)
chr6 (194-236)||(14986391-14986433)
chr6 (196-236)||(15432337-15432377)
chr6 (186-234)||(25342639-25342687)
chr6 (192-227)||(24570763-24570798)
chr6 (192-227)||(33289079-33289114)
chr6 (186-236)||(2965459-2965509)
chr6 (185-238)||(14671889-14671942)
chr6 (195-236)||(24165091-24165132)
chr6 (200-236)||(2737142-2737178)
[»] chr5 (29 HSPs)
chr5 (8-236)||(20874686-20874917)
chr5 (8-236)||(34107338-34107569)
chr5 (8-236)||(34110650-34110881)
chr5 (8-236)||(38246865-38247096)
chr5 (8-236)||(16526306-16526537)
chr5 (8-236)||(10729442-10729673)
chr5 (8-236)||(2398942-2399171)
chr5 (8-236)||(17373161-17373395)
chr5 (25-236)||(20655049-20655260)
chr5 (25-229)||(1396007-1396211)
chr5 (25-236)||(33375780-33375993)
chr5 (8-201)||(33570342-33570538)
chr5 (25-236)||(5479214-5479425)
chr5 (86-236)||(40177120-40177270)
chr5 (8-189)||(14141154-14141338)
chr5 (25-227)||(25099245-25099447)
chr5 (25-227)||(25158335-25158537)
chr5 (32-218)||(24223182-24223368)
chr5 (25-197)||(27647948-27648120)
chr5 (25-200)||(29275642-29275817)
chr5 (25-194)||(6940545-6940714)
chr5 (32-181)||(1394541-1394690)
chr5 (25-173)||(17913759-17913907)
chr5 (171-236)||(8179753-8179818)
chr5 (171-227)||(30088711-30088767)
chr5 (171-227)||(30096285-30096341)
chr5 (199-240)||(4082591-4082632)
chr5 (199-227)||(16349724-16349752)
chr5 (189-237)||(41391476-41391524)
[»] chr4 (34 HSPs)
chr4 (8-236)||(52434622-52434853)
chr4 (8-236)||(16917888-16918119)
chr4 (8-236)||(30824922-30825153)
chr4 (8-236)||(53143262-53143493)
chr4 (8-236)||(37651664-37651895)
chr4 (25-236)||(16904952-16905163)
chr4 (8-236)||(12090459-12090691)
chr4 (8-236)||(31965969-31966200)
chr4 (25-236)||(33139471-33139682)
chr4 (25-234)||(46256052-46256261)
chr4 (25-237)||(37590803-37591015)
chr4 (25-236)||(35760599-35760810)
chr4 (25-236)||(47142800-47143011)
chr4 (25-227)||(44376088-44376290)
chr4 (25-236)||(41387144-41387355)
chr4 (25-236)||(48118534-48118742)
chr4 (25-234)||(45976992-45977201)
chr4 (25-236)||(39058357-39058568)
chr4 (25-213)||(31628510-31628698)
chr4 (25-212)||(52098214-52098402)
chr4 (60-234)||(54625003-54625177)
chr4 (25-184)||(45782481-45782640)
chr4 (25-174)||(50229768-50229918)
chr4 (142-196)||(50229712-50229766)
chr4 (195-236)||(18209699-18209740)
chr4 (82-129)||(34684603-34684650)
chr4 (171-236)||(26724108-26724173)
chr4 (195-226)||(11238181-11238212)
chr4 (192-227)||(19745243-19745278)
chr4 (192-227)||(19794528-19794563)
chr4 (192-227)||(23976715-23976750)
chr4 (194-236)||(18258213-18258255)
chr4 (194-236)||(22289955-22289997)
chr4 (200-236)||(8371080-8371116)
[»] chr2 (23 HSPs)
chr2 (8-236)||(41664508-41664739)
chr2 (8-236)||(6120550-6120781)
chr2 (8-236)||(18351549-18351780)
chr2 (8-236)||(41663235-41663466)
chr2 (8-236)||(44902080-44902310)
chr2 (25-236)||(19596363-19596574)
chr2 (13-236)||(20544828-20545054)
chr2 (25-236)||(8700279-8700490)
chr2 (25-234)||(31424027-31424236)
chr2 (26-236)||(42055216-42055428)
chr2 (8-236)||(42441958-42442193)
chr2 (83-236)||(27944796-27944949)
chr2 (25-242)||(36279449-36279665)
chr2 (25-234)||(26231261-26231470)
chr2 (25-238)||(34007712-34007920)
chr2 (25-205)||(999262-999442)
chr2 (82-211)||(692227-692356)
chr2 (25-195)||(16214842-16215012)
chr2 (171-236)||(2988885-2988950)
chr2 (192-236)||(25889039-25889083)
chr2 (192-227)||(31572466-31572501)
chr2 (186-236)||(22139561-22139611)
chr2 (200-236)||(17839249-17839285)
[»] chr1 (32 HSPs)
chr1 (8-236)||(4266379-4266610)
chr1 (8-236)||(34888686-34888917)
chr1 (8-236)||(38913747-38913978)
chr1 (25-236)||(1231814-1232025)
chr1 (8-236)||(2951366-2951597)
chr1 (8-212)||(50151058-50151265)
chr1 (25-236)||(9216049-9216260)
chr1 (25-236)||(23482707-23482918)
chr1 (25-231)||(35614085-35614291)
chr1 (82-237)||(31018199-31018354)
chr1 (25-236)||(18706509-18706719)
chr1 (82-234)||(50326076-50326228)
chr1 (25-236)||(7333962-7334173)
chr1 (25-236)||(38444649-38444860)
chr1 (25-237)||(52687113-52687324)
chr1 (25-236)||(18855233-18855443)
chr1 (25-196)||(39727998-39728169)
chr1 (25-197)||(35614834-35615005)
chr1 (27-181)||(19764605-19764759)
chr1 (142-236)||(29942153-29942247)
chr1 (119-203)||(5061335-5061419)
chr1 (25-141)||(2590353-2590468)
chr1 (25-145)||(19768482-19768602)
chr1 (189-237)||(52957058-52957106)
chr1 (193-236)||(2590466-2590509)
chr1 (171-227)||(29387896-29387952)
chr1 (200-236)||(26497649-26497685)
chr1 (195-227)||(28947463-28947495)
chr1 (175-221)||(14009849-14009895)
chr1 (171-236)||(45115428-45115493)
chr1 (200-236)||(4325454-4325490)
chr1 (176-232)||(36465864-36465920)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-236)||(149050-149261)
[»] scaffold0836 (1 HSPs)
scaffold0836 (84-238)||(5276-5430)
[»] scaffold0173 (1 HSPs)
scaffold0173 (25-236)||(19365-19576)
[»] scaffold0515 (1 HSPs)
scaffold0515 (84-236)||(6061-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (84-236)||(6071-6223)
[»] scaffold0896 (1 HSPs)
scaffold0896 (171-227)||(1081-1137)
[»] scaffold0316 (1 HSPs)
scaffold0316 (194-228)||(14730-14764)
[»] scaffold1234 (1 HSPs)
scaffold1234 (200-236)||(1047-1083)


Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 21098302 - 21098533
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 21098501  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  21098502 acccgtgcggcagcacgggtggaaagtctagt 21098533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 12264198 - 12264429
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12264397  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  12264398 acccgtgcggcagcacgggtggaaagtctagt 12264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 38654158 - 38653927
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38653959  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  38653958 acccgtgcggcagcacgggtggaaagtctagt 38653927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 43363842 - 43363611
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 43363643  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  43363642 acccgtgcggcagcacgggtggaaagtctagt 43363611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 49672560 - 49672791
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49672759  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  49672760 acccgtgcggcagcacgggtggaaagtctagt 49672791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 1941951 - 1941719
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 1941752  T
Q  205 acccgtgcggcagcacgggtggaaagtctagtg 237  Q
    |||||||||||||||||||||||||||||||||    
T  1941751 acccgtgcggcagcacgggtggaaagtctagtg 1941719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 34121353 - 34121584
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34121552  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  34121553 acccgtgcggcagcacgggtggaaagtctagt 34121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 3898420 - 3898651
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatg 3898619  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  3898620 acccgtgcggcagcacgggtggaaagtctagt 3898651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 49506580 - 49506349
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| ||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49506381  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||| ||||||||||||||||||    
T  49506380 acccgtgcggcagtacgggtggaaagtctagt 49506349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 54073025 - 54073260
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatg---tat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 54073224  T
Q  202 atgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    ||||||||||||||||||||||||||||||||||||    
T  54073225 atgacccgtgcggcagcacgggtggaaagtctagtg 54073260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 26948816 - 26949027
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  26948816 tataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 26948915  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  26948916 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 26949015  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  26949016 ggaaagtctagt 26949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 4584645 - 4584433
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||| |||||||||||||||    
T  4584645 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgc 4584546  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4584545 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 4584446  T
Q  225 ggaaagtctagtg 237  Q
    |||||||||||||    
T  4584445 ggaaagtctagtg 4584433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 20671267 - 20671478
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  20671267 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 20671366  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||    
T  20671367 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcgtgtggcagcacgggt 20671466  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  20671467 ggaaagtctagt 20671478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 36076665 - 36076454
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||| ||||||||||||||||||||    
T  36076665 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcgaattccaacatctgc 36076566  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  36076565 atatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 36076466  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  36076465 ggaaagtctagt 36076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 40014837 - 40014653
Alignment:
Q  52 cacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 151  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  152 tctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40014653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 31488429 - 31488638
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  31488429 tataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 31488528  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |    
T  31488529 atatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatataacccgtgcggcagcacggat 31488628  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  31488629 ggaaagtcta 31488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 39146458 - 39146667
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  39146458 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 39146557  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||| | |    
T  39146558 atatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcggcaacacagat 39146657  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  39146658 ggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 45558115 - 45557884
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 45557916  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||| || ||| ||||| |||||||||||||||    
T  45557915 acctgtacggtagcactggtggaaagtctagt 45557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 49478226 - 49478438
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||| |||    
T  49478226 tataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatttgc 49478325  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||| ||||| |||||||||||||||||    
T  49478326 atatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatgactcgtgcggcagcacgggt 49478425  T
Q  225 ggaaagtctagtg 237  Q
    |||||||||||||    
T  49478426 ggaaagtctagtg 49478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 25 - 231
Target Start/End: Complemental strand, 55041800 - 55041588
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaac 118  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||      |||||       |||||||||| |||||||||||||||||||||| |||    
T  55041800 tataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaac 55041701  T
Q  119 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagc 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  55041700 atctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggtagc 55041601  T
Q  219 acgggtggaaagt 231  Q
    |||||||||||||    
T  55041600 acgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 24119225 - 24119394
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||| ||||||||||||||||    
T  24119225 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtttgaattccaacatctgc 24119324  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctac 194  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| || ||||||    
T  24119325 atatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  82 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggg-accacatatttcattctctttgatatgcattgagatttgtttttg 180  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  181 tctattatatctacaatgtatatg 204  Q
    |||| || ||||||||||||||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 6460273 - 6460168
Alignment:
Q  130 tttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaa 229  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  6460273 tttgggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6460175  T
Q  230 gtctagt 236  Q
    |||||||    
T  6460174 gtctagt 6460168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 26052289 - 26052240
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaata 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26052289 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 26052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 37099729 - 37099764
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  37099729 tacaatgtatatgacccgtgcggcagcacgggtgga 37099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Complemental strand, 53556951 - 53556920
Alignment:
Q  196 atgtatatgacccgtgcggcagcacgggtgga 227  Q
    ||||||||||||||||||||||||||||||||    
T  53556951 atgtatatgacccgtgcggcagcacgggtgga 53556920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 5561594 - 5561565
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||    
T  5561594 aatgtatatgacccgtgcggcagcacgggt 5561565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 13364066 - 13364022
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||  |||| || |||||||    
T  13364066 tacaatgtatatgacccgtgcggcagcagaggtgaaatgtctagt 13364022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 20370394 - 20370358
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||  |||||||    
T  20370394 atatgacccgtgcggcagcacgggtggatggtctagt 20370358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 25437286 - 25437322
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  25437286 atatgacccgtgcggcagcacgggtgcaaggtctagt 25437322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 46272 - 46503
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 46471  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  46472 acccgtgcggcagcacgggtggaaagtctagt 46503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 15961130 - 15961361
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 15961329  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  15961330 acccgtgcggcagcacgggtggaaagtctagt 15961361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 30474115 - 30473884
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30473916  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  30473915 acccgtgcggcagcacgggtggaaagtctagt 30473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 6299251 - 6299020
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6299052  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  6299051 acccgtgcggcagcacgggtggaaagtctagt 6299020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 10477935 - 10478166
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10478134  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  10478135 acccgtgcggcagcacgggtggaaagtctagt 10478166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 18997698 - 18997929
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18997897  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||| ||||||||    
T  18997898 acccgtgcggcagcacgggtggatagtctagt 18997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 32111092 - 32110861
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 32110893  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  32110892 acccgtgcggcagcacgggtggaaagtctagt 32110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 44832417 - 44832186
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44832218  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||| |||||||||||||||||||    
T  44832217 acccgtgcggcaacacgggtggaaagtctagt 44832186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 996046 - 995815
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 995847  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  995846 acccgtgcggcagcacgggtggaaagtctagt 995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 18175379 - 18175610
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||| ||||||| ||||||||       |||||||||| ||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18175578  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  18175579 acccgtgcggcagcacgggtggaaagtctagt 18175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 11725208 - 11725419
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  11725208 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 11725307  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  11725308 atatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcagcagcacgggt 11725407  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  11725408 ggaaagtctagt 11725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 28582873 - 28583084
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  28582873 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 28582972  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  28582973 atatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggt 28583072  T
Q  225 ggaaagtctagt 236  Q
    ||||| ||||||    
T  28583073 ggaaaatctagt 28583084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 35122533 - 35122322
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||| |||||||||||||||||||    
T  35122533 tataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaacatctgc 35122434  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||    
T  35122433 atatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcgacagcaggggt 35122334  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  35122333 ggaaagtctagt 35122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 18841922 - 18842133
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||| || |||||||||||||||||       |||||||||| |||||||||||| |||||||||||||||||||    
T  18841922 tataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaacatctgc 18842021  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  18842022 atatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcggcagaacgggt 18842121  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  18842122 ggaaagtctagt 18842133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 44836927 - 44837138
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  44836927 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 44837026  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  44837027 atatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatataacccgtgcggcagcacgggt 44837126  T
Q  225 ggaaagtctagt 236  Q
    |||||| |||||    
T  44837127 ggaaaggctagt 44837138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 39997726 - 39997920
Alignment:
Q  42 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 141  Q
    |||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  142 tatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaattctagt 39997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 18568883 - 18569092
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       | |||||||| ||||||| ||||||||||||||||||||||||    
T  18568883 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgc 18568982  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||| |||||||||    
T  18568983 atatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggtagcacgggt 18569082  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  18569083 ggaaagtcta 18569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 24408894 - 24409105
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||| ||||||||||||||||||||    
T  24408894 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgttcgaattccaacatctgc 24408993  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| || |||||||||||||||||||||||||||| |||||||    
T  24408994 atatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatgacccgtgcggcaacacgggt 24409093  T
Q  225 ggaaagtctagt 236  Q
     |||||||||||    
T  24409094 agaaagtctagt 24409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 39257461 - 39257648
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||| |||||||||||||||    
T  39257461 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgc 39257560  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39257561 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 11142479 - 11142691
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaac 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||      |||||       |||||||||| ||||||||||||||||||||||||||    
T  11142479 tataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaac 11142578  T
Q  119 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagc 218  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  11142579 atctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgatccgtgcggcagc 11142678  T
Q  219 acgggtggaaagt 231  Q
    |||||||||||||    
T  11142679 acgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 40026818 - 40027006
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||| |||||||||||||||    
T  40026818 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgc 40026917  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcg 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  40026918 atatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 28274425 - 28274217
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||||||||||||||||||||    
T  28274425 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctgc 28274326  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||| |||||| || |||||| |    
T  28274325 gtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatgatccgtgc-gccgcacggat 28274227  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  28274226 ggaaagtcta 28274217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 32 - 204
Target Start/End: Complemental strand, 18210828 - 18210656
Alignment:
Q  32 ttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatt 131  Q
    |||||||||||| ||| ||||||||||||||||||||||||||       |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18210828 ttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctgcatatatt 18210729  T
Q  132 tgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18210728 tgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 19240681 - 19240840
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||    
T  19240681 tataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcgaattccaacatctgc 19240780  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240781 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 19240840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 19313865 - 19314024
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||    
T  19313865 tataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcgaattccaacatctgc 19313964  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19313965 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 19314024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 19412849 - 19413022
Alignment:
Q  25 tataatattaacaaaa-gaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 123  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||       |||||||||  |||||||||||||||||||||||||||||||    
T  19412849 tataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgaggttcgaattccaacatctg 19412948  T
Q  124 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  19412949 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 24004938 - 24004779
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||||||||| ||||||||||    
T  24004938 tataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgc 24004839  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 184  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  24004838 atatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 23353788 - 23353688
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||| | ||||||||||||||||||||||||||||||    
T  23353788 tataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggttcgaattccaacatctgc 23353689  T
Q  125 a 125  Q
    |    
T  23353688 a 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 25875424 - 25875322
Alignment:
Q  97 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 196  Q
    |||||||||||||||||||| ||||||||||     |||| ||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |    
T  25875424 tgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatatctacga 25875330  T
Q  197 tgtatatg 204  Q
    ||||||||    
T  25875329 tgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 23353680 - 23353622
Alignment:
Q  178 ttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23353680 ttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 23353622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 19241008 - 19241056
Alignment:
Q  189 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19241008 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagtg 19241056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 19314192 - 19314240
Alignment:
Q  189 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19314192 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagtg 19314240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 25875510 - 25875461
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaata 74  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  25875510 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaata 25875461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 405419 - 405363
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||| ||||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  405419 tttgcttttgtctactatacttacaatgtatatgacccgtgcggcagcacgggtgga 405363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 18481971 - 18481929
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaa 67  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  18481971 tataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 17695618 - 17695653
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||| |||||||||||||||||||||||    
T  17695618 tacaatgtatattacccgtgcggcagcacgggtgga 17695653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 44831178 - 44831143
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||| |||||||||||||||||    
T  44831178 tacaatgtatatgacccgagcggcagcacgggtgga 44831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 34815244 - 34815285
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  34815244 aatgtatatgacccgtgcgtcagcacgggtgataagtctagt 34815285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 40169757 - 40169720
Alignment:
Q  199 tatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  40169757 tatatgacccgtgcggtagcacgggtggaaagactagt 40169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 5769526 - 5769490
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  5769526 atatgacccgtgcggcagcacgggtgcaaggtctagt 5769490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 11071997 - 11071961
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  11071997 atatgacccgtgcggcagcacgggtgcaaggtctagt 11071961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 24471872 - 24471908
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  24471872 atatgacccgtgcggcagcacgggtgcaaggtctagt 24471908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 21804803 - 21804572
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 21804604  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  21804603 acccgtgcggcagcacgggtggaaagtctagt 21804572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 38163570 - 38163339
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38163371  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  38163370 acccgtgcggcagcacgggtggaaagtctagt 38163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 42242385 - 42242154
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 42242186  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  42242185 acccgtgcggcagcacgggtggaaagtctagt 42242154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 31373454 - 31373685
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 31373653  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  31373654 acccgtgcggcagcacgggtggaaagtctagt 31373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 33917178 - 33916947
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33916979  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  33916978 acccgtgcggcagcacgggtggaaagtctagt 33916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 3840867 - 3840641
Alignment:
Q  13 aatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 109  Q
    ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  110 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactcg 3840668  T
Q  210 tgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||    
T  3840667 tgcggcagcacgggtggaaagtctagt 3840641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 21341821 - 21342052
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatg 21342020  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  21342021 acccgtgcggcagcacgggtggaaagtctagt 21342052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 27138759 - 27138528
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatg 27138560  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||| ||||||||||||||||||||||||||||    
T  27138559 acctgtgcggcagcacgggtggaaagtctagt 27138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 21669999 - 21670210
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  21669999 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 21670098  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  21670099 atatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggt 21670198  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  21670199 ggaaagtctagt 21670210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 16376756 - 16376545
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  16376756 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 16376657  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  16376656 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 16376557  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  16376556 ggaaagtctagt 16376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 17178469 - 17178237
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnn-ggtgaataagcgtggtgtctga 103  Q
    |||| ||||||||||||   |||||| ||||||||||||||||||||||| |||||||||||||||||||        |||||||||| |||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  104 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatat 17178270  T
Q  204 gacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||| |||||||||||||||||||||||||||    
T  17178269 gacccatgcggcagcacgggtggaaagtctagt 17178237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 40968909 - 40969120
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  40968909 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 40969008  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  40969009 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 40969108  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  40969109 ggaaagtctagt 40969120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 13786188 - 13786399
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||| |||||||||| || |||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  13786188 tataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 13786287  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13786288 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 13786387  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  13786388 ggaaagtctagt 13786399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 21656646 - 21656857
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  21656646 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 21656745  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||| || |||||||||    
T  21656746 atatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatgacccgtgtggtagcacgggt 21656845  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  21656846 ggaaagtctagt 21656857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 43933755 - 43933546
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  43933755 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 43933656  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| || |||||||||||||||||||| ||||| |||||||||    
T  43933655 atatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatgacccttgcggtagcacgggt 43933556  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  43933555 ggaaagtcta 43933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 15109876 - 15109660
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       | |||||||| ||||||||||||||||||||||||||||||||    
T  15109876 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggttcgaattccaacatctgc 15109777  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| || |||||  |||||||||    
T  15109776 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgtccggtgcgatagcacgggt 15109677  T
Q  225 ggaaagtctagtgattt 241  Q
    |||||||||||| ||||    
T  15109676 ggaaagtctagttattt 15109660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 24924097 - 24924294
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||       |||||||||| |||||||||||||||| ||||||||||||| |    
T  24924097 tataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatctac 24924196  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgg 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  24924197 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 27903621 - 27903417
Alignment:
Q  32 ttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatt 131  Q
    |||||||||||||||||||| ||||||||| ||||||||||||       |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  27903621 ttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctgcatatatt 27903522  T
Q  132 tgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagt 231  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||    
T  27903521 tgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatgacccgtgcggcagcacgggtggaaagt 27903422  T
Q  232 ctagt 236  Q
    |||||    
T  27903421 ctagt 27903417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 39030446 - 39030276
Alignment:
Q  42 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 141  Q
    |||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  142 tatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgc 212  Q
    | ||| ||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 21753703 - 21753524
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||| |||||||||||  |||||||||    
T  21753703 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggttcgaattttaacatctgc 21753604  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  21753603 atatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 31097897 - 31097932
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  31097897 tacaatgtatatgacccgtgcggcagcacgggtgga 31097932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 13765318 - 13765379
Alignment:
Q  175 tttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||| ||| || |||| |||| |||||| |||||||| |||||||||||||||||||    
T  13765318 tttttgtctgttacatttacagtgtacatgacctgtgcggcaacacgggtggaaagtctagt 13765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 11001360 - 11001324
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11001360 atatgacccgtgcggcagcacgggtggaaggtctagt 11001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 32661033 - 32661086
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||| ||||||||| || |  ||||||||||||||| |||||||||||||||||    
T  32661033 tttgcttttgtctactacacttacaatgtatatgactcgtgcggcagcacgggt 32661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacaca 55  Q
    |||| ||||||||||||   |||||| ||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 12597496 - 12597265
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12597297  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  12597296 acccgtgcggcagcacgggtggaaagtctagt 12597265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 28099828 - 28099597
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 28099629  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  28099628 acccgtgcggcagcacgggtggaaagtctagt 28099597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 19997663 - 19997892
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 19997862  T
Q  205 acccgtgcggcagcacgggtggaaagtcta 234  Q
    ||||||||||||||||||||||||||||||    
T  19997863 acccgtgcggcagcacgggtggaaagtcta 19997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 33645940 - 33646171
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33646139  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  33646140 acccgtgcggcagcacgggtggaaagtctagt 33646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 2266766 - 2267005
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtg--------g 96  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||        |    
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  97 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  197 tgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2266966 tgtatatgacccgtgcggcagcacgggtggaaagtctagt 2267005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 13533785 - 13533996
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  13533785 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 13533884  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  13533885 atatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgtgcggcagcacgggt 13533984  T
Q  225 ggaaagtctagt 236  Q
    ||||| ||||||    
T  13533985 ggaaaatctagt 13533996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 3592911 - 3593122
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||||||||||||     
T  3592911 tataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctga 3593010  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3593011 atatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 3593110  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  3593111 ggaaagtctagt 3593122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 17202450 - 17202661
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  17202450 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 17202549  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||||  ||||||||||||||||    
T  17202550 atatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatgacttgtgcggcagcacgggt 17202649  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  17202650 ggaaagtctagt 17202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 10584939 - 10584727
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||||||||||||||||||||||||||||    
T  10584939 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcgaattccaacatctgc 10584840  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |  ||||||||||||    
T  10584839 atatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgacccatatggcagcacgggt 10584740  T
Q  225 ggaaagtctagtg 237  Q
    |||||||||||||    
T  10584739 ggaaagtctagtg 10584727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 15044740 - 15044951
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  15044740 tataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 15044839  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  15044840 atatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacctgtgcggcagcacgggt 15044939  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  15044940 ggaaagtctagt 15044951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 2005446 - 2005657
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  2005446 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 2005545  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||| ||    
T  2005546 atatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatgacccgtgcggccgcacgagt 2005645  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  2005646 ggaaagtctagt 2005657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 1405688 - 1405563
Alignment:
Q  111 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgt 210  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| || ||||||||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  211 gcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||| ||||||    
T  1405588 gcggcagcacgggtggaaaatctagt 1405563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 17594834 - 17594979
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 123  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||       |||||||||| ||||||||||| ||| ||||| ||||||||     
T  17594834 tataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaagtttgaatttcaacatctc 17594933  T
Q  124 catatatttgggaccacatatttcattctctttgatatgcattgag 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17594934 catatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 8539618 - 8539726
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  8539618 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 8539717  T
Q  125 atatatttg 133  Q
    |||||||||    
T  8539718 atatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 25448747 - 25448876
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| ||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  105 gttcgaattccaacatctgcatatatttgg 134  Q
     ||||||||||||||||| |||||||||||    
T  25448847 tttcgaattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  97 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 196  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  197 tgta 200  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 8539723 - 8539782
Alignment:
Q  177 tttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539723 tttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 8539782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 162710 - 162669
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 162669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 6300774 - 6300709
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||| ||| || || |||||||||||||||||||||||||||||||||| | ||||||||    
T  6300774 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 6307584 - 6307519
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||| ||| || || |||||||||||||||||||||||||||||||||| | ||||||||    
T  6307584 tttgtttttgcctactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 8657129 - 8657073
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||| ||||||||| || |  ||||||||||||||||||||||||||||||||||||    
T  8657129 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 8657073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 14986433 - 14986391
Alignment:
Q  194 caatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  14986433 caatgtatatgacccgtgcagcagcacgggtgcaaagtctagt 14986391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 15432377 - 15432337
Alignment:
Q  196 atgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  15432377 atgtatatgacccgtgcggccgcacgggtagaaagtctagt 15432337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 25342687 - 25342639
Alignment:
Q  186 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 234  Q
    ||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  25342687 tatatttacattgtatatgactcgtgcggcagcacgggtgaaaagtcta 25342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 24570798 - 24570763
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||||| |||||||||||||||    
T  24570798 tacaatgtatatgacccgtgtggcagcacgggtgga 24570763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 33289114 - 33289079
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||| |||||||||||||||||||||||||||||    
T  33289114 tacaatctatatgacccgtgcggcagcacgggtgga 33289079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 2965509 - 2965459
Alignment:
Q  186 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||| |||| ||| |||||||||||||||||||||||||  |||||||||    
T  2965509 tatatttacattgtttatgacccgtgcggcagcacgggtgataagtctagt 2965459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 14671889 - 14671942
Alignment:
Q  185 ttatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtga 238  Q
    |||||| | ||||||||||||| ||||||||||||| |||||||  ||||||||    
T  14671889 ttatatgttcaatgtatatgacacgtgcggcagcacaggtggaagatctagtga 14671942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 24165132 - 24165091
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  24165132 aatgtatatgacccgtgcgtcagcacgggtgataagtctagt 24165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 2737142 - 2737178
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||  |||||||    
T  2737142 atatgacccgtgcggcagcacgggtggatggtctagt 2737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 20874686 - 20874917
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 20874885  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  20874886 acccgtgcggcagcacgggtggaaagtctagt 20874917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 34107569 - 34107338
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34107370  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  34107369 acccgtgcggcagcacgggtggaaagtctagt 34107338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 34110650 - 34110881
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34110849  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  34110850 acccgtgcggcagcacgggtggaaagtctagt 34110881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 38247096 - 38246865
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38246897  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  38246896 acccgtgcggcagcacgggtggaaagtctagt 38246865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 16526537 - 16526306
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16526338  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  16526337 acccgtgcggcagcacgggtggaaagtctagt 16526306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 10729673 - 10729442
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10729474  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  10729473 acccgtgcggcagcacgggtggaaagtctagt 10729442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 2399171 - 2398942
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 2398974  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  2398973 acccgtgcggcagcacgggtggaaagtctagt 2398942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 17373395 - 17373161
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatg---tat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 17373196  T
Q  202 atgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||||||||||    
T  17373195 atgacccgtgcggcagcacgggtggaaagtctagt 17373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 20655260 - 20655049
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  20655260 tataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 20655161  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  20655160 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 20655061  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  20655060 ggaaagtctagt 20655049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 1396007 - 1396211
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  1396007 tataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 1396106  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||||||||||||||    
T  1396107 agatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatgacccgtgcggcagcacgggt 1396206  T
Q  225 ggaaa 229  Q
    |||||    
T  1396207 ggaaa 1396211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 33375780 - 33375993
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  33375780 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 33375879  T
Q  125 atatatttgggac--cacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgg 222  Q
    |||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  33375880 atatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgg 33375979  T
Q  223 gtggaaagtctagt 236  Q
    ||||||||| ||||    
T  33375980 gtggaaagtttagt 33375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 8 - 201
Target Start/End: Complemental strand, 33570538 - 33570342
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 5479214 - 5479425
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| || ||||||||||||||||||||||||||| |    
T  5479214 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcgaattccaacatctac 5479313  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||| || ||| |||    
T  5479314 atatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatgacccgtgcgacaacacaggt 5479413  T
Q  225 ggaaagtctagt 236  Q
    | ||||||||||    
T  5479414 gaaaagtctagt 5479425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 40177120 - 40177270
Alignment:
Q  86 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctat 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  186 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40177220 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40177270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 14141338 - 14141154
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattata 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactata 14141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 25099447 - 25099245
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| |||||||||||||||||||||||||    
T  25099447 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcgaattccaacatctgc 25099348  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  25099347 atatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 25099248  T
Q  225 gga 227  Q
    |||    
T  25099247 gga 25099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 25158537 - 25158335
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| |||||||||||||||||||||||||    
T  25158537 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcgaattccaacatctgc 25158438  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  25158437 atatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 25158338  T
Q  225 gga 227  Q
    |||    
T  25158337 gga 25158335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 24223368 - 24223182
Alignment:
Q  32 ttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatt 131  Q
    |||||||||||||||||||||||||||||| |||| | |||||       |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24223368 ttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatt 24223269  T
Q  132 tgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagc 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  24223268 tgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatgacccgtgcggcagc 24223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 27647948 - 27648120
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||     
T  27647948 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgt 27648047  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  27648048 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 29275642 - 29275817
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  29275642 tataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 29275741  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgta 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  29275742 atatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 6940714 - 6940545
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||       |||||||||| ||||||| ||||||||||||||||||||||||    
T  6940714 tataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgc 6940615  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctac 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  6940614 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 1394690 - 1394541
Alignment:
Q  32 ttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  1394690 ttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggttcgaattccaacatctgcatatatt 1394591  T
Q  132 tgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1394590 tgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 25 - 173
Target Start/End: Original strand, 17913759 - 17913907
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||||||       |||||||||| ||||| | |||||||||||||||||||||| |    
T  17913759 tataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcgaattccaacatctac 17913858  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagattt 173  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17913859 atatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 8179818 - 8179753
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||| ||| ||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  8179818 tttgctttggtctactacatctacaatatatatgatccgtgcggcagcacgggtggaaagtctagt 8179753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 30088767 - 30088711
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    ||||||||||||||  |||  ||||||||||||||||||||||||||||||| ||||    
T  30088767 tttgtttttgtctacaatacttacaatgtatatgacccgtgcggcagcacggatgga 30088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 30096341 - 30096285
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||| |||||||||  |||  |||||||||||||| |||||||||||||||||||||    
T  30096341 tttgcttttgtctacaatacttacaatgtatatgatccgtgcggcagcacgggtgga 30096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 4082591 - 4082632
Alignment:
Q  199 tatatgacccgtgcggcagcacgggtggaaagtctagtgatt 240  Q
    |||||||||||||||||||||||||||||   ||||||||||    
T  4082591 tatatgacccgtgcggcagcacgggtggacgatctagtgatt 4082632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 16349752 - 16349724
Alignment:
Q  199 tatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||||||||||||||    
T  16349752 tatatgacccgtgcggcagcacgggtgga 16349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 41391524 - 41391476
Alignment:
Q  189 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    ||||| ||||||||||||||||||| || |||||||| || ||||||||    
T  41391524 atctataatgtatatgacccgtgcgtcaacacgggtgaaaggtctagtg 41391476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 52434622 - 52434853
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 52434821  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  52434822 acccgtgcggcagcacgggtggaaagtctagt 52434853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 16918119 - 16917888
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16917920  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||| |||||||||||||||    
T  16917919 acccgtgcggcagcacaggtggaaagtctagt 16917888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 30825153 - 30824922
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30824954  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  30824953 acccgtgcggcagcacgggtggaaagtctagt 30824922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 53143493 - 53143262
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 53143294  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||| ||| ||||||    
T  53143293 acccgtgcggcagcacgggtgaaaaatctagt 53143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 37651664 - 37651895
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatg 37651863  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  37651864 acccgtgcggcagcacgggtggaaagtctagt 37651895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 16905163 - 16904952
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  16905163 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 16905064  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  16905063 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 16904964  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  16904963 ggaaagtctagt 16904952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 12090691 - 12090459
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaa-tgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctga 103  Q
    |||| ||||||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  104 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 203  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  204 gacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||||||||    
T  12090491 gacccgtgcggcagcacgggtggaaagtctagt 12090459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 31966200 - 31965969
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatg 31966001  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  31966000 acccgtgcggcagcacgggtggaaagtctagt 31965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 33139682 - 33139471
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||  ||||||||||||||||||||||||||||||||    
T  33139682 tataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggttcgaattccaacatctgc 33139583  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  33139582 atatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatgacccgtgcggcagcacgggt 33139483  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  33139482 ggaaagtctagt 33139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 46256052 - 46256261
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||       |||||||||| |||||||||||||||| |||||||||||||||    
T  46256052 tataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttccaattccaacatctgc 46256151  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  46256152 atatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 46256251  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  46256252 ggaaagtcta 46256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 37591015 - 37590803
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||||||||| ||||||||||    
T  37591015 tataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctgc 37590916  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  37590915 atatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 37590816  T
Q  225 ggaaagtctagtg 237  Q
    |||||||||||||    
T  37590815 ggaaagtctagtg 37590803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 35760599 - 35760810
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||  ||||||| ||||||||||||||||||||||||    
T  35760599 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcgaattccaacatctgc 35760698  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  35760699 atatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgtgcggcagcacgggt 35760798  T
Q  225 ggaaagtctagt 236  Q
    ||||| ||||||    
T  35760799 ggaaaatctagt 35760810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 47143011 - 47142800
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||||       ||||||||||| ||||||||||||||||||||| |||||||||    
T  47143011 tataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggttcgaattctaacatctgc 47142912  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  47142911 atatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgaccagtgcggcagcacgggt 47142812  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  47142811 ggaaagtctagt 47142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 44376290 - 44376088
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  44376290 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 44376191  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  44376190 atatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 44376091  T
Q  225 gga 227  Q
    |||    
T  44376090 gga 44376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 41387144 - 41387355
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||       |||||||||| ||||||||||||||||||||| || |||||||    
T  41387144 tataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcagcatctgc 41387243  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |    
T  41387244 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtacggcagcacggat 41387343  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  41387344 ggaaagtctagt 41387355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 48118742 - 48118534
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||       |||||||| | ||||||| ||||||||||||||||||||||||    
T  48118742 tataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggttcgaattccaacatctgc 48118643  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   || |||||||||||||||||| |||||||||||||||||    
T  48118642 atatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtc---tacatctacaatgtatatgactcgtgcggcagcacgggt 48118546  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  48118545 ggaaagtctagt 48118534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 45977201 - 45976992
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  45977201 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 45977102  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||| || |||||| ||||||||||||||||| ||||||||| |    
T  45977101 atatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatgacccgtgcagcagcacggat 45977002  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  45977001 ggaaagtcta 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 39058568 - 39058357
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||       |||||||||| ||||| ||||||||||||||||||||||||      
T  39058568 tataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggttcgaattccaacatcttg 39058469  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||  ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  39058468 atatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacaggt 39058369  T
Q  225 ggaaagtctagt 236  Q
    ||||| ||||||    
T  39058368 ggaaaatctagt 39058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 31628698 - 31628510
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||       | |||||||| ||||||| ||||||||||||||||||||||||    
T  31628698 tataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggttcgaattccaacatctgc 31628599  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcg 213  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||    
T  31628598 atatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 25 - 212
Target Start/End: Complemental strand, 52098402 - 52098214
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 123  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| || |||||||| ||| |||||||||||||||    
T  52098402 tataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaagtttgaattccaacatctg 52098303  T
Q  124 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||    
T  52098302 catatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatatgacccgtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 234
Target Start/End: Original strand, 54625003 - 54625177
Alignment:
Q  60 tgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgat 159  Q
    |||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625003 tgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgat 54625102  T
Q  160 atgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 234  Q
    ||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||| || |||  ||||||| ||||    
T  54625103 atgcattaagatttgtttttgtctactacgtctacaatgtatataacccgtgcgacatcacatgtggaaaatcta 54625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 45782640 - 45782481
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||| ||||||||||||| |    
T  45782640 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcaaattccaacatcttc 45782541  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtcta 184  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  45782540 atatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtcta 45782481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 50229918 - 50229768
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaa-ttaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 123  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||||       ||||||||||  ||||||||||||||||||||||||||||||    
T  50229918 tataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttcgaattccaacatctg 50229819  T
Q  124 catatatttgggaccacatatttcattctctttgatatgcattgagatttg 174  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50229818 catatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  142 tatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 196  Q
    |||||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 18209699 - 18209740
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 18209740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  82 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatata 129  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 26724108 - 26724173
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||| ||||||||||| | | | || ||||||| ||||||||||||||||||||| ||||||||||    
T  26724108 tttgcttttgtctattgtttttgcattgtatataacccgtgcggcagcacgggtgaaaagtctagt 26724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 11238181 - 11238212
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtgg 226  Q
    ||||||||||||||||||||||||||||||||    
T  11238181 aatgtatatgacccgtgcggcagcacgggtgg 11238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 19745243 - 19745278
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||||||||| |||||||||||    
T  19745243 tacaatgtatatgacccgtgcggccgcacgggtgga 19745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 19794563 - 19794528
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||||||||| |||||||||||    
T  19794563 tacaatgtatatgacccgtgcggccgcacgggtgga 19794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 23976750 - 23976715
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||| |||||||||||||||||||||||||||||    
T  23976750 tacaatatatatgacccgtgcggcagcacgggtgga 23976715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 18258255 - 18258213
Alignment:
Q  194 caatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||| | || ||||||||    
T  18258255 caatgtatatgacccgtgcggcagcacggatagacagtctagt 18258213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 22289997 - 22289955
Alignment:
Q  194 caatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||| |||||||||||||||||| || |||||||    
T  22289997 caatgtatatgactcgtgcggcagcacgggtgcaaggtctagt 22289955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 8371116 - 8371080
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  8371116 atatgacccgtgcggcagcacgggtgcaaggtctagt 8371080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 41664508 - 41664739
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41664707  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  41664708 acccgtgcggcagcacgggtggaaagtctagt 41664739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 6120550 - 6120781
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||| | |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6120749  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  6120750 acccgtgcggcagcacgggtggaaagtctagt 6120781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 18351549 - 18351780
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18351748  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  18351749 acccgtgcggcagcacgggtggaaagtctagt 18351780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 41663235 - 41663466
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41663434  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||| |||||||||||||||||||||||||||    
T  41663435 acccatgcggcagcacgggtggaaagtctagt 41663466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 44902080 - 44902310
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgag 44902178  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44902179 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44902278  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  44902279 acccgtgcggcagcacgggtggaaagtctagt 44902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 19596574 - 19596363
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  19596574 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 19596475  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  19596474 atatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 19596375  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  19596374 ggaaagtctagt 19596363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 20544828 - 20545054
Alignment:
Q  13 aatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 109  Q
    ||||||||||||   |||||| ||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||| | |||||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  110 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccg 209  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccg 20545027  T
Q  210 tgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||||    
T  20545028 tgcggcagcacgggtggaaagtctagt 20545054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 8700279 - 8700490
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||| ||  ||||||| ||||||||||||||||||||||||    
T  8700279 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggttcgaattccaacatctgc 8700378  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  8700379 atatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggt 8700478  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  8700479 ggaaagtctagt 8700490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 234
Target Start/End: Original strand, 31424027 - 31424236
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||| |||||||||||||||||||||| |    
T  31424027 tataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcgaattccaacatctac 31424126  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  31424127 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggt 31424226  T
Q  225 ggaaagtcta 234  Q
    ||||||||||    
T  31424227 ggaaagtcta 31424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 26 - 236
Target Start/End: Original strand, 42055216 - 42055428
Alignment:
Q  26 ataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgca 125  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||    
T  42055216 ataatcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgca 42055315  T
Q  126 tatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcg--gcagcacggg 223  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||  | ||||||||    
T  42055316 tatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggtgtagcacggg 42055415  T
Q  224 tggaaagtctagt 236  Q
    |||||||||||||    
T  42055416 tggaaagtctagt 42055428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 42441958 - 42442193
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  105 gttcg------aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatg 198  Q
    |||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T
Q  199 tatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42442156 tatatgacccgtgcggcaacacgggtggaaagtctagt 42442193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 83 - 236
Target Start/End: Complemental strand, 27944949 - 27944796
Alignment:
Q  83 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  183 tattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 27944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 36279665 - 36279449
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||| |||||| |||||||||||||||||||    
T  36279665 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagattcgaattccaacatctgc 36279566  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||||||||||| |||||  | ||||||||    
T  36279565 atatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatgactcgtgctac-gcacgggt 36279467  T
Q  225 ggaaagtctagtgattta 242  Q
    ||||||||||||||||||    
T  36279466 ggaaagtctagtgattta 36279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 26231470 - 26231261
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       | |||||||| |||||||||||||||||||||||||||||||     
T  26231470 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggttcgaattccaacatctga 26231371  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||| |||||||||    
T  26231370 atatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatataacctgtgcggtagcacgggt 26231271  T
Q  225 ggaaagtcta 234  Q
    | ||||||||    
T  26231270 gaaaagtcta 26231261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 238
Target Start/End: Complemental strand, 34007920 - 34007712
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||       |||| ||||| ||||||||||||||||||||||||||||| ||    
T  34007920 tataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcgaattccaacatcggc 34007821  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||| ||||||     |||||||||    
T  34007820 atatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattacccgt-----agcacgggt 34007726  T
Q  225 ggaaagtctagtga 238  Q
    ||||||||||||||    
T  34007725 ggaaagtctagtga 34007712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 25 - 205
Target Start/End: Complemental strand, 999442 - 999262
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||| |    
T  999442 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctac 999343  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatga 205  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||    
T  999342 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatga 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 692356 - 692227
Alignment:
Q  82 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  182 ctattatatctacaatgtatatgacccgtg 211  Q
    ||| || || ||||||||||||||||||||    
T  692256 ctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 16214842 - 16215012
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||||  |||||||||||||| |||| |||    
T  16214842 tataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctacatttgc 16214941  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctaca 195  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  16214942 atatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 2988885 - 2988950
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||| | | | || |||||||||||| |||||||||||||||| ||||||||||    
T  2988885 tttgtttttgtctattgtttttgcattgtatatgacccatgcggcagcacgggtgaaaagtctagt 2988950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 25889083 - 25889039
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  25889083 tacattgtatatgacccgtgcggcagcacgagtggaaagtctagt 25889039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 31572466 - 31572501
Alignment:
Q  192 tacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  31572466 tacaatgtatatgacccgtgcggcagcacgggtgga 31572501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 22139611 - 22139561
Alignment:
Q  186 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||| |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  22139611 tatatttacattgtatatgacccgtgctgcaacacgggtgaaaagtctagt 22139561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 17839249 - 17839285
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||  |||||||    
T  17839249 atatgacccgtgcggcagcacgggtggatggtctagt 17839285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 4266379 - 4266610
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 4266578  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  4266579 acccgtgcggcagcacgggtggaaagtctagt 4266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 34888917 - 34888686
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34888718  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  34888717 acccgtgcggcagcacgggtggaaagtctagt 34888686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 38913978 - 38913747
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38913779  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  38913778 acccgtgcggcagcacgggtggaaagtctagt 38913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 1231814 - 1232025
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  1231814 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 1231913  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1231914 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacgggt 1232013  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  1232014 ggaaagtctagt 1232025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 2951597 - 2951366
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatg 2951398  T
Q  205 acccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||    
T  2951397 acccgtgcggcagcacgggtggaaagtctagt 2951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 50151058 - 50151265
Alignment:
Q  8 ccaagaatataatattg---tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 104  Q
    |||| ||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  105 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 50151257  T
Q  205 acccgtgc 212  Q
    ||||||||    
T  50151258 acccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 9216049 - 9216260
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       ||| |||||| ||||||||||||||||||||||||||||||||    
T  9216049 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggttcgaattccaacatctgc 9216148  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9216149 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatgacccgtgcggcagcacgggt 9216248  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  9216249 ggaaagtctagt 9216260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 23482918 - 23482707
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||||||||||||||||||||    
T  23482918 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgc 23482819  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||    
T  23482818 atatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatgactcgtgcggcagcacgggt 23482719  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  23482718 ggaaagtctagt 23482707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 25 - 231
Target Start/End: Original strand, 35614085 - 35614291
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||| | ||||||||||||||||||||    
T  35614085 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagttcgaattccaacatctgc 35614184  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||    
T  35614185 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatgacccgtgcggtagcacgggt 35614284  T
Q  225 ggaaagt 231  Q
    |||||||    
T  35614285 ggaaagt 35614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 82 - 237
Target Start/End: Complemental strand, 31018354 - 31018199
Alignment:
Q  82 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  182 ctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018254 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 31018199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 18706719 - 18706509
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||       |||||||||| ||||||| ||||||||||||||||||||||||    
T  18706719 tataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcgaattccaacatctgc 18706620  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  18706619 atatatttgg-accacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatgactcgtgcggcagcacgggt 18706521  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  18706520 ggaaagtctagt 18706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 82 - 234
Target Start/End: Original strand, 50326076 - 50326228
Alignment:
Q  82 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  182 ctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 234  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326176 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 50326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 7333962 - 7334173
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||| ||||||||||||||||    
T  7333962 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggtttgaattccaacatctgc 7334061  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| || ||||| |||||||| |||||||||||    
T  7334062 atatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatataacccgtgcagcagcacgggt 7334161  T
Q  225 ggaaagtctagt 236  Q
    | ||||||||||    
T  7334162 gaaaagtctagt 7334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 38444649 - 38444860
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||| ||||||||||||||||||||  |||||||||||||||||       |||||||||| ||||||||||| ||||||||| ||||||||||    
T  38444649 tataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcgaatttcaacatctgc 38444748  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||||    
T  38444749 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccatgcggcatcacgggt 38444848  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  38444849 ggaaagtctagt 38444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 52687324 - 52687113
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||||| ||||||||||||||    
T  52687324 tataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcggattccaacatctgc 52687226  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || || ||||||||||||||||||||||||| ||||||||||    
T  52687225 atatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccgtgcgacagcacgggt 52687126  T
Q  225 ggaaagtctagtg 237  Q
    |||||||||||||    
T  52687125 ggaaagtctagtg 52687113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 18855443 - 18855233
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||||||||||| |||||||| |    
T  18855443 tataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaatttcaacatctac 18855344  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||||||||||||||||    
T  18855343 atatatttgggaccacatgttttattctctttgatatgcattgagatttg-atttgtctactgcatctacaatgtatatgacccgtgcggcagcacgggt 18855245  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  18855244 ggaaagtctagt 18855233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 39727998 - 39728169
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  39727998 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 39728097  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 196  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  39728098 atatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 35614834 - 35615005
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       ||| |||||| ||||||||||||||||||||||||||||||||    
T  35614834 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaa-ggtaaataagtgtggtgtctgaggttcgaattccaacatctgc 35614932  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaat 197  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||    
T  35614933 atatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 19764759 - 19764605
Alignment:
Q  27 taatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcat 126  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||| ||||| |||||    
T  19764759 taattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaacatttgcat 19764660  T
Q  127 atatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 181  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19764659 atatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgt 19764605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 29942153 - 29942247
Alignment:
Q  142 tatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 29942247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  119 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatat 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 2590353 - 2590468
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||| |||||| |||||||||    
T  2590353 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtt-gaattcgaacatctgc 2590451  T
Q  125 atatatttgggaccaca 141  Q
    |||||||||| ||||||    
T  2590452 atatatttggaaccaca 2590468  T

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Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 19768482 - 19768602
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||       | |||||||| ||||||||||||||||||| | |||||||| |    
T  19768482 tataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggttcgaaattcaacatctac 19768581  T
Q  125 atatatttgggaccacatatt 145  Q
    || ||||||| ||||||||||    
T  19768582 atgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 52957058 - 52957106
Alignment:
Q  189 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtg 237  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52957058 atctacaatgtatatgacccgtgcggcagcacgggtggagagtctagtg 52957106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 2590466 - 2590509
Alignment:
Q  193 acaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagtctagt 2590509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 29387952 - 29387896
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||| || |  |||||||||||||||||||||||||| |||||||||    
T  29387952 tttgtttttgtctactacacttacaatgtatatgacccgtgcggcagtacgggtgga 29387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 26497649 - 26497685
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26497649 atatgacccgtgcggcagcacgggtgcaaagtctagt 26497685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 28947495 - 28947463
Alignment:
Q  195 aatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||||||||||||||||||||||||||||||||    
T  28947495 aatgtatatgacccgtgcggcagcacgggtgga 28947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 14009849 - 14009895
Alignment:
Q  175 tttttgtctattatatctacaatgtatatgacccgtgcggcagcacg 221  Q
    |||||||||| || || |||||| |||||||||||||||||||||||    
T  14009849 tttttgtctactacatttacaatttatatgacccgtgcggcagcacg 14009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 45115493 - 45115428
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||| | | | || ||||||||||| ||||| || |||||||| ||||||||||    
T  45115493 tttgtttttgtctattgtttttgcattgtatatgacctgtgcgacatcacgggtgaaaagtctagt 45115428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 4325490 - 4325454
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  4325490 atatgacccgtgcggcagcacgggtgcaaggtctagt 4325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 36465864 - 36465920
Alignment:
Q  176 ttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtc 232  Q
    ||||||| | ||||| ||||  |||||||||| ||||||||||||||||| ||||||    
T  36465864 ttttgtcaactatatttacaccgtatatgacctgtgcggcagcacgggtgaaaagtc 36465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 236
Target Start/End: Complemental strand, 149261 - 149050
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||| ||| ||||||||||||||||||||    
T  149261 tataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgttcgaattccaacatctgc 149162  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  149161 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatgacccgtgcggcagcacgggt 149062  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  149061 ggaaagtctagt 149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 84 - 238
Target Start/End: Complemental strand, 5430 - 5276
Alignment:
Q  84 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  184 attatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtga 238  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagtctagtga 5276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 19365 - 19576
Alignment:
Q  25 tataatattaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgc 124  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||    
T  19365 tataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgc 19464  T
Q  125 atatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggt 224  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||    
T  19465 atatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtataggacccgtacggcagcacgggt 19564  T
Q  225 ggaaagtctagt 236  Q
    ||||||||||||    
T  19565 ggaaagtctagt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 6213 - 6061
Alignment:
Q  84 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 183  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  184 attatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |  | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6113 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 6223 - 6071
Alignment:
Q  84 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 183  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  184 attatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |  | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6123 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 1081 - 1137
Alignment:
Q  171 tttgtttttgtctattatatctacaatgtatatgacccgtgcggcagcacgggtgga 227  Q
    |||| ||||||||| || |  ||||||||||||||||||||||||||||||||||||    
T  1081 tttgcttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Original strand, 14730 - 14764
Alignment:
Q  194 caatgtatatgacccgtgcggcagcacgggtggaa 228  Q
    ||||||||||||||||||||||| |||||||||||    
T  14730 caatgtatatgacccgtgcggcaacacgggtggaa 14764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1234
Description:

Target: scaffold1234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 1047 - 1083
Alignment:
Q  200 atatgacccgtgcggcagcacgggtggaaagtctagt 236  Q
    |||||||||||||||||||||||||| || |||||||    
T  1047 atatgacccgtgcggcagcacgggtgcaaggtctagt 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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