View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18555_high_16 (Length: 239)
Name: NF18555_high_16
Description: NF18555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18555_high_16 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25575162 - 25575400
Alignment:
| Q |
1 |
gaagagactttccagatgaaggtggccatgttgttcctaaccagggtcgcattggtagaggggccgagccaactcatggcaaggcaactgactgcgggaa |
100 |
Q |
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| T |
25575162 |
gaagagactttccagatgaaggtggccatgttgttcctaaccagggtcgcattggtagaggggccgagccaactcatggcaaggcaactgactgcgggaa |
25575261 |
T |
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| Q |
101 |
tgggaatactttggaatttgatcgctacaaaccttcctgtggctatgacagaaaggatgacaaagaagattactctagtggttctcttttagctaattcc |
200 |
Q |
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| T |
25575262 |
tgggaatactttggaatttgatcgctacagaccttcctgtggctatgacagaaaggatgacaaagaagattactctagtggttctcttttagctaattcc |
25575361 |
T |
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| Q |
201 |
caggagaatgtgggcagagcacagattggtgaggaaacc |
239 |
Q |
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| T |
25575362 |
caggagaatgtgggcagagcacagattggtgaggaaacc |
25575400 |
T |
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