View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18555_low_13 (Length: 267)
Name: NF18555_low_13
Description: NF18555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18555_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 4 - 254
Target Start/End: Complemental strand, 7913909 - 7913658
Alignment:
| Q |
4 |
atgtcgaagaatatggattggaatgttgctataagaatggaactatttgtagataacaaatcaacaattgattcagccaag-atcacgttagtcatggta |
102 |
Q |
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| T |
7913909 |
atgtcaaagattatggattggaatgttgctataagaatggaactatttgtagataacaaatcaacaattgattcagccaagcatcacgtgagtcatggta |
7913810 |
T |
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| Q |
103 |
ggagcaagcatatagaaacgaaattgaaactcgagaccaagtacattagtagaagttgaaacttgagtaccgcaacatactaatatacaattagctggta |
202 |
Q |
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| T |
7913809 |
ggagcaagcatatagaaaagaaattgaaactcgagaccaagtacattagtagaagttgaaacttgagtaccgcaacatactaatatacaattagctggta |
7913710 |
T |
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| Q |
203 |
tactcacaaaacctttgaagaaaatcaagtttgatgacttgaagaaattgat |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7913709 |
tactcacaaaacctttgaagaaaatcaagtttgatgacttgaagaaattgat |
7913658 |
T |
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