View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18556_high_10 (Length: 313)
Name: NF18556_high_10
Description: NF18556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18556_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 5 - 301
Target Start/End: Original strand, 30874502 - 30874800
Alignment:
| Q |
5 |
tgtccaatgattcaaacctcaaaacgaatagaaaaacaaatggatcaattgagtactgcagagaaaacggaataggatgagattggaaggggaaagagag |
104 |
Q |
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| T |
30874502 |
tgtccaatgattcaaacctcaaaacgaatagaaaaacaaatggatcaattgagtactgcagagaaaacggaataggatgagattggaagggaaaagagag |
30874601 |
T |
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| Q |
105 |
agacagagaaacaaataaagtggtggaacttgcgaccattctcacaactaggaaagtattcataacaataaaatattcatggtgggattaaacaatgtaa |
204 |
Q |
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| T |
30874602 |
agacagagaaacaaataaagtggtggaacttgcgaccattctcacaactaggaaagtattcataacaataaaatattcatggtgggattaaacaatgtaa |
30874701 |
T |
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| Q |
205 |
gtt--tatttatttattaatctctttgaaaaccacattaattatagttaattgtagacttttaaaatcatgggatgaagttaaattgttgtgtctatat |
301 |
Q |
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| T |
30874702 |
gtttatatttatttattaatctctttgaaaactacattaattatagttaattgtagacttttaaaatcatgggatgaagttaaattgttgtgtctatat |
30874800 |
T |
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