View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18558_high_7 (Length: 302)
Name: NF18558_high_7
Description: NF18558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18558_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 2323815 - 2323530
Alignment:
| Q |
1 |
acaagaatagaaaaaagattaatcaagactcaaacattataaatatcacaaggatatgcatgataataagaagattaatttacttacacgaatgacaatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2323815 |
acaagaatagaaaaaagattaatcaagactcaaacattataaatatcacaaggatatgcatgataataagaagattaatttacttacacgaatgacaatt |
2323716 |
T |
|
| Q |
101 |
tccaagacacagatcacgcagattatcgagaacttcttggtcagcataaactcccataacagtcttaccactcttcttgacttttccggttggcttgaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2323715 |
tccaagacacagatcacgcagattatcgagaacttcttggtcagcataaactcccataacagtcttaccactcttcttgacttttccggttggcttgaat |
2323616 |
T |
|
| Q |
201 |
tcaagcaaggtttccaagttggccattatgcgctgaaaaattcatagcttagataattaagtaacagctactcagttatcattact |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2323615 |
tcaagcaaggtttccaagttggccattatgcgctgaaaaattcatagcttagataattaagtaacagctactcagttatcattact |
2323530 |
T |
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