View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18559_low_5 (Length: 601)

Name: NF18559_low_5
Description: NF18559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18559_low_5
NF18559_low_5
[»] chr7 (45 HSPs)
chr7 (104-585)||(38643553-38644034)
chr7 (104-233)||(38644628-38644757)
chr7 (97-217)||(12643096-12643216)
chr7 (104-217)||(4227156-4227269)
chr7 (97-217)||(45915792-45915912)
chr7 (97-241)||(47558026-47558170)
chr7 (104-217)||(12644117-12644230)
chr7 (104-213)||(4226128-4226237)
chr7 (104-201)||(12930775-12930872)
chr7 (104-217)||(45914529-45914640)
chr7 (104-201)||(7158234-7158331)
chr7 (104-201)||(12929290-12929387)
chr7 (98-182)||(37284106-37284190)
chr7 (104-217)||(27479990-27480103)
chr7 (98-182)||(37289329-37289413)
chr7 (106-217)||(22661362-22661473)
chr7 (99-217)||(27480731-27480849)
chr7 (192-245)||(32053427-32053480)
chr7 (106-178)||(31695637-31695709)
chr7 (97-176)||(31694467-31694546)
chr7 (106-213)||(40022517-40022623)
chr7 (248-330)||(40397564-40397645)
chr7 (159-221)||(47559044-47559106)
chr7 (192-245)||(2640462-2640515)
chr7 (192-245)||(23181278-23181331)
chr7 (192-241)||(27396883-27396932)
chr7 (192-245)||(28469292-28469345)
chr7 (192-245)||(40379860-40379913)
chr7 (192-245)||(42731510-42731563)
chr7 (98-201)||(7159213-7159315)
chr7 (130-201)||(19979980-19980050)
chr7 (122-201)||(27558136-27558215)
chr7 (130-201)||(43937923-43937994)
chr7 (192-238)||(6571104-6571150)
chr7 (192-238)||(17102111-17102157)
chr7 (192-238)||(27991830-27991876)
chr7 (192-238)||(30948420-30948466)
chr7 (192-238)||(32680855-32680901)
chr7 (192-245)||(10935885-10935938)
chr7 (192-245)||(42019881-42019934)
chr7 (192-245)||(45010689-45010742)
chr7 (97-201)||(26825626-26825730)
chr7 (104-168)||(26825826-26825890)
chr7 (177-241)||(32688506-32688570)
chr7 (192-240)||(45010893-45010941)
[»] scaffold0347 (2 HSPs)
scaffold0347 (104-287)||(13612-13795)
scaffold0347 (104-243)||(14551-14690)
[»] chr1 (62 HSPs)
chr1 (104-287)||(25064936-25065119)
chr1 (96-243)||(25065916-25066063)
chr1 (99-217)||(13295133-13295251)
chr1 (242-370)||(27998136-27998260)
chr1 (106-201)||(32619389-32619484)
chr1 (104-217)||(46282074-46282187)
chr1 (106-213)||(6345625-6345732)
chr1 (106-217)||(46282777-46282888)
chr1 (99-173)||(13295608-13295682)
chr1 (106-188)||(32622369-32622451)
chr1 (104-182)||(51935218-51935296)
chr1 (104-217)||(49093044-49093157)
chr1 (98-201)||(2828190-2828293)
chr1 (106-201)||(6344260-6344355)
chr1 (106-217)||(50062932-50063043)
chr1 (104-201)||(2829539-2829643)
chr1 (106-181)||(32238704-32238779)
chr1 (130-201)||(10019657-10019728)
chr1 (139-217)||(49093797-49093875)
chr1 (192-245)||(1103552-1103605)
chr1 (192-245)||(6367653-6367706)
chr1 (192-245)||(14879062-14879115)
chr1 (192-245)||(40210654-40210707)
chr1 (192-245)||(46163121-46163174)
chr1 (106-198)||(52563656-52563748)
chr1 (180-243)||(34850351-34850414)
chr1 (99-201)||(1047488-1047590)
chr1 (187-245)||(13245936-13245994)
chr1 (180-242)||(34849090-34849152)
chr1 (191-245)||(37578476-37578530)
chr1 (104-201)||(2953748-2953845)
chr1 (192-245)||(4960631-4960684)
chr1 (176-233)||(10303998-10304055)
chr1 (192-245)||(13914351-13914404)
chr1 (175-228)||(16970836-16970889)
chr1 (192-245)||(17662134-17662187)
chr1 (164-245)||(22103790-22103871)
chr1 (192-245)||(24009825-24009878)
chr1 (192-245)||(42248564-42248617)
chr1 (122-201)||(5926540-5926619)
chr1 (122-201)||(19755689-19755768)
chr1 (191-238)||(31514577-31514624)
chr1 (122-201)||(33347700-33347779)
chr1 (122-201)||(46849942-46850021)
chr1 (94-201)||(49002869-49002976)
chr1 (192-238)||(183482-183528)
chr1 (187-245)||(21444680-21444738)
chr1 (192-238)||(24905427-24905473)
chr1 (192-238)||(25647975-25648021)
chr1 (192-238)||(28011454-28011500)
chr1 (104-178)||(28534820-28534893)
chr1 (192-238)||(33442854-33442900)
chr1 (187-245)||(42267389-42267447)
chr1 (192-245)||(1841550-1841603)
chr1 (124-201)||(29980922-29980999)
chr1 (192-245)||(30711418-30711471)
chr1 (192-245)||(32917351-32917404)
chr1 (192-245)||(34464733-34464786)
chr1 (192-245)||(43758913-43758966)
chr1 (192-245)||(44523420-44523473)
chr1 (144-217)||(50062246-50062319)
chr1 (192-228)||(40772598-40772634)
[»] chr2 (51 HSPs)
chr2 (425-557)||(38235272-38235404)
chr2 (91-217)||(25623278-25623404)
chr2 (104-217)||(25624417-25624530)
chr2 (104-201)||(24387354-24387451)
chr2 (104-202)||(24388255-24388353)
chr2 (104-182)||(20101773-20101851)
chr2 (98-217)||(29957814-29957933)
chr2 (92-201)||(20982515-20982624)
chr2 (99-182)||(20103163-20103246)
chr2 (104-217)||(20983245-20983358)
chr2 (108-201)||(19620793-19620886)
chr2 (104-182)||(29958566-29958644)
chr2 (192-245)||(2318249-2318302)
chr2 (192-245)||(15848179-15848232)
chr2 (192-245)||(36755184-36755237)
chr2 (192-245)||(37895631-37895684)
chr2 (98-198)||(33881572-33881672)
chr2 (106-174)||(43236509-43236577)
chr2 (106-181)||(33882892-33882967)
chr2 (187-245)||(10840562-10840620)
chr2 (187-245)||(11721374-11721432)
chr2 (124-201)||(9694026-9694103)
chr2 (192-245)||(36382252-36382305)
chr2 (192-245)||(39423606-39423659)
chr2 (192-245)||(44714045-44714098)
chr2 (97-201)||(1150221-1150325)
chr2 (106-174)||(7983837-7983905)
chr2 (97-201)||(16366959-16367063)
chr2 (97-201)||(20911126-20911230)
chr2 (122-201)||(37985011-37985090)
chr2 (99-201)||(1149935-1150037)
chr2 (192-238)||(1696000-1696046)
chr2 (192-238)||(6657969-6658015)
chr2 (173-239)||(6846856-6846922)
chr2 (187-245)||(11689627-11689685)
chr2 (192-238)||(14900743-14900789)
chr2 (192-238)||(16099146-16099192)
chr2 (187-237)||(17266484-17266534)
chr2 (99-201)||(18476905-18477007)
chr2 (192-238)||(33739794-33739840)
chr2 (192-238)||(39498401-39498447)
chr2 (164-241)||(6848022-6848099)
chr2 (105-174)||(7981051-7981120)
chr2 (104-201)||(10446835-10446932)
chr2 (192-245)||(10712814-10712867)
chr2 (192-233)||(11163319-11163360)
chr2 (192-245)||(25892485-25892538)
chr2 (100-201)||(28599426-28599527)
chr2 (104-201)||(32519158-32519255)
chr2 (192-245)||(36479809-36479862)
chr2 (106-174)||(43237747-43237815)
[»] chr3 (51 HSPs)
chr3 (104-241)||(32717065-32717202)
chr3 (97-241)||(29192953-29193097)
chr3 (106-254)||(29192040-29192188)
chr3 (104-201)||(22736690-22736787)
chr3 (106-219)||(37249204-37249317)
chr3 (106-217)||(37249782-37249892)
chr3 (104-217)||(2943916-2944029)
chr3 (91-217)||(48189083-48189209)
chr3 (104-217)||(45279268-45279381)
chr3 (106-201)||(44481953-44482048)
chr3 (104-217)||(2944650-2944763)
chr3 (104-217)||(11026616-11026729)
chr3 (137-217)||(32716285-32716365)
chr3 (106-217)||(45278549-45278660)
chr3 (106-217)||(48188383-48188494)
chr3 (106-182)||(44476054-44476130)
chr3 (99-201)||(1757304-1757406)
chr3 (115-217)||(43105818-43105920)
chr3 (192-245)||(26463882-26463935)
chr3 (127-217)||(1756576-1756666)
chr3 (104-201)||(1741390-1741487)
chr3 (192-245)||(9294242-9294295)
chr3 (192-245)||(33689663-33689716)
chr3 (176-245)||(41988037-41988106)
chr3 (192-242)||(51994173-51994223)
chr3 (101-203)||(55036669-55036771)
chr3 (192-245)||(23458263-23458316)
chr3 (192-245)||(33156278-33156331)
chr3 (192-245)||(40758235-40758288)
chr3 (127-188)||(43105259-43105320)
chr3 (192-245)||(43384374-43384427)
chr3 (130-203)||(46670537-46670610)
chr3 (145-201)||(22735403-22735459)
chr3 (130-201)||(30890236-30890307)
chr3 (187-242)||(44654790-44654845)
chr3 (192-238)||(2796270-2796316)
chr3 (192-238)||(8041707-8041753)
chr3 (192-238)||(10770751-10770797)
chr3 (123-201)||(10998157-10998235)
chr3 (139-181)||(11025975-11026017)
chr3 (187-245)||(20704611-20704669)
chr3 (115-201)||(21255815-21255901)
chr3 (192-238)||(36314558-36314604)
chr3 (498-552)||(37609645-37609699)
chr3 (192-238)||(48322637-48322683)
chr3 (192-238)||(54466514-54466560)
chr3 (115-168)||(21300340-21300393)
chr3 (192-237)||(40033748-40033793)
chr3 (124-201)||(40256897-40256974)
chr3 (192-245)||(40506071-40506124)
chr3 (100-201)||(55036953-55037054)
[»] chr8 (53 HSPs)
chr8 (4-100)||(39030477-39030573)
chr8 (98-217)||(34213761-34213880)
chr8 (99-201)||(38598962-38599064)
chr8 (104-201)||(1231529-1231626)
chr8 (104-201)||(25288076-25288173)
chr8 (91-182)||(33497635-33497726)
chr8 (104-201)||(1232799-1232894)
chr8 (104-201)||(7393145-7393242)
chr8 (104-217)||(34665773-34665886)
chr8 (106-201)||(4970130-4970225)
chr8 (106-201)||(24377186-24377281)
chr8 (99-217)||(34214512-34214631)
chr8 (105-185)||(33497020-33497100)
chr8 (108-182)||(24379015-24379089)
chr8 (99-172)||(4463455-4463528)
chr8 (106-178)||(29574747-29574819)
chr8 (106-217)||(34666525-34666635)
chr8 (192-245)||(4405944-4405997)
chr8 (192-245)||(16388810-16388863)
chr8 (192-245)||(36928567-36928620)
chr8 (193-245)||(31608797-31608849)
chr8 (97-176)||(29575910-29575989)
chr8 (91-174)||(36574807-36574890)
chr8 (192-238)||(23698535-23698581)
chr8 (124-201)||(9632351-9632428)
chr8 (192-245)||(13186151-13186204)
chr8 (104-181)||(27436566-27436643)
chr8 (100-201)||(27857026-27857127)
chr8 (192-245)||(35756673-35756726)
chr8 (192-245)||(39071767-39071820)
chr8 (192-245)||(40318248-40318301)
chr8 (192-238)||(1425313-1425359)
chr8 (192-238)||(3041716-3041762)
chr8 (143-201)||(7392250-7392308)
chr8 (192-238)||(23663805-23663851)
chr8 (187-245)||(24085860-24085918)
chr8 (192-238)||(36325325-36325371)
chr8 (192-238)||(38845559-38845605)
chr8 (192-238)||(40775910-40775956)
chr8 (192-238)||(44407117-44407163)
chr8 (104-201)||(23424796-23424893)
chr8 (104-181)||(27437539-27437616)
chr8 (96-201)||(29190443-29190548)
chr8 (115-168)||(36623560-36623613)
chr8 (115-168)||(37342989-37343042)
chr8 (192-233)||(38862709-38862750)
chr8 (192-233)||(38955794-38955835)
chr8 (93-170)||(40422475-40422552)
chr8 (104-201)||(41801819-41801916)
chr8 (115-168)||(43866835-43866888)
chr8 (100-132)||(7392219-7392251)
chr8 (191-243)||(30710945-30710997)
chr8 (93-201)||(40525499-40525607)
[»] chr5 (61 HSPs)
chr5 (104-217)||(22870446-22870559)
chr5 (108-217)||(22869612-22869721)
chr5 (96-201)||(14744730-14744835)
chr5 (104-217)||(20856935-20857048)
chr5 (106-217)||(36476770-36476881)
chr5 (104-217)||(20857531-20857644)
chr5 (106-219)||(36477358-36477471)
chr5 (104-178)||(31107934-31108008)
chr5 (104-217)||(20072853-20072966)
chr5 (104-179)||(8654110-8654185)
chr5 (106-201)||(21978017-21978112)
chr5 (91-201)||(21978971-21979082)
chr5 (98-217)||(39181054-39181173)
chr5 (104-217)||(39181780-39181893)
chr5 (106-217)||(16532898-16533009)
chr5 (192-245)||(13962955-13963008)
chr5 (104-217)||(16533609-16533722)
chr5 (104-217)||(20072124-20072237)
chr5 (100-201)||(31108338-31108438)
chr5 (106-185)||(8673774-8673853)
chr5 (122-201)||(21260886-21260965)
chr5 (106-201)||(21972095-21972189)
chr5 (139-201)||(39402148-39402210)
chr5 (104-201)||(25253089-25253186)
chr5 (104-201)||(25316879-25316976)
chr5 (192-245)||(29646646-29646699)
chr5 (192-245)||(32242333-32242386)
chr5 (122-201)||(14745469-14745548)
chr5 (187-245)||(12904840-12904898)
chr5 (99-201)||(32052508-32052610)
chr5 (115-177)||(34404498-34404560)
chr5 (192-245)||(5993980-5994033)
chr5 (192-245)||(8322495-8322548)
chr5 (104-201)||(25253370-25253467)
chr5 (104-201)||(25317161-25317258)
chr5 (192-245)||(35512239-35512292)
chr5 (192-245)||(39453391-39453444)
chr5 (97-201)||(33735597-33735701)
chr5 (192-236)||(35920477-35920521)
chr5 (130-201)||(37945023-37945094)
chr5 (192-238)||(297274-297320)
chr5 (192-238)||(3529133-3529179)
chr5 (192-238)||(6758125-6758171)
chr5 (123-201)||(22024154-22024232)
chr5 (192-242)||(24547412-24547462)
chr5 (192-238)||(41930607-41930653)
chr5 (192-245)||(5024302-5024355)
chr5 (192-245)||(10684030-10684083)
chr5 (192-245)||(11047528-11047581)
chr5 (192-233)||(14194719-14194760)
chr5 (104-201)||(18934716-18934813)
chr5 (192-245)||(19892592-19892645)
chr5 (192-245)||(20840624-20840677)
chr5 (192-233)||(28269684-28269725)
chr5 (192-233)||(28771134-28771175)
chr5 (192-233)||(31482667-31482708)
chr5 (192-233)||(38442159-38442200)
chr5 (192-233)||(38475295-38475336)
chr5 (192-228)||(6150545-6150581)
chr5 (101-201)||(8323056-8323156)
chr5 (97-201)||(22533674-22533778)
[»] chr4 (53 HSPs)
chr4 (98-217)||(23455673-23455792)
chr4 (99-217)||(23454952-23455070)
chr4 (104-201)||(53477080-53477177)
chr4 (106-219)||(38982578-38982691)
chr4 (104-192)||(54591587-54591675)
chr4 (102-201)||(54590144-54590243)
chr4 (91-201)||(55013089-55013198)
chr4 (97-217)||(56556578-56556698)
chr4 (98-217)||(52816407-52816526)
chr4 (104-217)||(38813557-38813670)
chr4 (104-176)||(13336863-13336935)
chr4 (97-217)||(38814311-38814431)
chr4 (104-217)||(56557309-56557422)
chr4 (98-217)||(52815660-52815779)
chr4 (106-176)||(22882352-22882422)
chr4 (106-176)||(22934016-22934086)
chr4 (195-245)||(17356206-17356256)
chr4 (192-245)||(14801827-14801880)
chr4 (192-245)||(34765664-34765717)
chr4 (177-242)||(41583518-41583583)
chr4 (191-245)||(10781768-10781822)
chr4 (191-245)||(16605692-16605746)
chr4 (191-245)||(24349764-24349818)
chr4 (192-238)||(50418928-50418974)
chr4 (106-171)||(9254411-9254476)
chr4 (192-245)||(35028282-35028335)
chr4 (177-242)||(40387543-40387608)
chr4 (187-244)||(52298112-52298169)
chr4 (192-245)||(53701903-53701956)
chr4 (191-238)||(4982986-4983033)
chr4 (94-201)||(12691689-12691796)
chr4 (122-201)||(35730945-35731024)
chr4 (192-238)||(9145026-9145072)
chr4 (192-238)||(13058128-13058174)
chr4 (106-176)||(22881172-22881242)
chr4 (106-176)||(22932836-22932906)
chr4 (192-238)||(23613400-23613446)
chr4 (192-238)||(27934623-27934669)
chr4 (192-238)||(36009104-36009150)
chr4 (192-238)||(42738291-42738337)
chr4 (192-238)||(43155787-43155833)
chr4 (181-243)||(48528552-48528614)
chr4 (192-238)||(49879467-49879513)
chr4 (192-245)||(15507957-15508010)
chr4 (192-237)||(16005929-16005974)
chr4 (115-168)||(22249940-22249993)
chr4 (192-245)||(37976437-37976490)
chr4 (192-233)||(44967334-44967375)
chr4 (192-245)||(52909344-52909397)
chr4 (192-228)||(24711202-24711238)
chr4 (94-170)||(48507732-48507808)
chr4 (187-243)||(48529862-48529918)
chr4 (97-201)||(53559671-53559775)
[»] scaffold0009 (2 HSPs)
scaffold0009 (93-203)||(262439-262549)
scaffold0009 (104-201)||(261004-261101)
[»] chr6 (29 HSPs)
chr6 (98-217)||(14656477-14656596)
chr6 (99-217)||(4116797-4116915)
chr6 (99-217)||(4117531-4117649)
chr6 (91-201)||(33401126-33401236)
chr6 (97-201)||(17784385-17784489)
chr6 (107-182)||(8427384-8427459)
chr6 (104-217)||(33399969-33400082)
chr6 (103-217)||(1661414-1661528)
chr6 (99-217)||(14657193-14657311)
chr6 (104-198)||(8427203-8427297)
chr6 (192-245)||(3059348-3059401)
chr6 (187-245)||(33648749-33648807)
chr6 (172-245)||(1215150-1215223)
chr6 (104-201)||(3299843-3299940)
chr6 (104-201)||(5064338-5064435)
chr6 (192-245)||(12080727-12080780)
chr6 (192-245)||(21627997-21628050)
chr6 (192-245)||(33517625-33517678)
chr6 (101-201)||(5064619-5064719)
chr6 (98-201)||(15819774-15819877)
chr6 (192-238)||(28000645-28000691)
chr6 (192-238)||(30337540-30337586)
chr6 (104-201)||(13480211-13480308)
chr6 (104-201)||(23291747-23291844)
chr6 (104-201)||(30234876-30234973)
chr6 (192-245)||(30725850-30725903)
chr6 (192-233)||(30803952-30803993)
chr6 (192-245)||(33647054-33647107)
chr6 (121-201)||(32337851-32337931)
[»] scaffold1493 (1 HSPs)
scaffold1493 (104-201)||(596-693)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-201)||(73112-73209)
[»] scaffold0176 (1 HSPs)
scaffold0176 (444-516)||(16831-16903)
[»] scaffold0182 (2 HSPs)
scaffold0182 (104-178)||(14400-14474)
scaffold0182 (98-182)||(13131-13215)
[»] scaffold0031 (1 HSPs)
scaffold0031 (192-245)||(69056-69109)
[»] scaffold0005 (1 HSPs)
scaffold0005 (192-245)||(37847-37900)
[»] scaffold0279 (1 HSPs)
scaffold0279 (122-201)||(10874-10953)
[»] scaffold0206 (1 HSPs)
scaffold0206 (122-201)||(10346-10425)
[»] scaffold0020 (1 HSPs)
scaffold0020 (191-238)||(139762-139809)
[»] scaffold0559 (1 HSPs)
scaffold0559 (192-238)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (192-238)||(141854-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (192-238)||(1860-1906)


Alignment Details
Target: chr7 (Bit Score: 402; Significance: 0; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 104 - 585
Target Start/End: Original strand, 38643553 - 38644034
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  38643553 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcatttaa 38643652  T
Q  204 gatttcgtccctctcctcacttaattactgtcacgtcactaagtcagcaaattaggggttgtgttgacaaaaatacccttggcttgttcagaccaatgca 303  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38643653 gatttcgtccctctccccacttaattactgtcacgtcactaattcagcaaattaggggttgtgttgacaaaaatacccttggcttgttcagaccaatgca 38643752  T
Q  304 caatgaccaaagagcccctgacttcatcttctcatctctcatcgtcatcaacccagaacttctgttccactttcccatcgtattagaacgaacactattg 403  Q
    |||||||||||| |||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  38643753 caatgaccaaagtgcccctaacttcatcttgtcatctctcatcatcatcaacccataacttctgttccactctcccatcatattagaacgaacactattg 38643852  T
Q  404 tatcaatcttcttcttctgagtcaaaatcaccaccacgtattgttgaagaggaatctgtgaaagaggttctatttgaaaaagaaacaccaatttttaaac 503  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  38643853 tatcaatcttcttcttctcagtcaaaatcaccaccacgtattgttgaagaggaatctgtgaaagaggtactatttgaaaaagaaacaccaatttctaaac 38643952  T
Q  504 cccaacaagttccttatttgacacaagaaacaatgacccaaatgcaaaatatggctacggctacagttactccatcaccacc 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38643953 cccaacaagttccttatttgacacaagaaacaatgacccaaatgcaaaatatggctacggttacagttactccatcaccacc 38644034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 38644757 - 38644628
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  38644757 ttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcatttaa 38644658  T
Q  204 gatttcgtccctctcctcacttaattactg 233  Q
    |||||| ||||||||| |||||||| ||||    
T  38644657 gatttcatccctctccccacttaatcactg 38644628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 12643096 - 12643216
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| || |||||||||     
T  12643096 aaaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaac 12643195  T
Q  197 catttaagatttcgtccctct 217  Q
    ||||||| |||||||||||||    
T  12643196 catttaaaatttcgtccctct 12643216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 4227269 - 4227156
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||| |||||||    
T  4227269 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatttaa 4227170  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  4227169 aatttcgtccctct 4227156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 45915912 - 45915792
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||    
T  45915912 aaaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaat 45915813  T
Q  197 catttaagatttcgtccctct 217  Q
    ||||||| ||| |||||||||    
T  45915812 catttaaaattccgtccctct 45915792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 241
Target Start/End: Original strand, 47558026 - 47558170
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||||||||||  ||  |||||||||  ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||     
T  47558026 aaaaggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaac 47558125  T
Q  197 catttaagatttcgtccctctcctcacttaattactgtcacgtca 241  Q
    ||||||| ||||||||||||| | |  ||||| ||||||||||||    
T  47558126 catttaaaatttcgtccctcttcccgattaatcactgtcacgtca 47558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 12644230 - 12644117
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||  ||||| ||| |||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  12644230 ttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcatttaa 12644131  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  12644130 aatttcgtccctct 12644117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 4226128 - 4226237
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||| ||||||||| ||||||||| |||| |  |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4226128 ttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatttaa 4226227  T
Q  204 gatttcgtcc 213  Q
     |||||||||    
T  4226228 aatttcgtcc 4226237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 12930775 - 12930872
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| || ||| |||||||||||    
T  12930775 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 45914529 - 45914640
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||||||||||  ||| ||||||||| |||||||||||||||| || ||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  45914529 ttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttgccc-tgtaaaaattaatcatttaa 45914626  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  45914627 aatttcgtccctct 45914640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 7158234 - 7158331
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||  ||| |||||||||||| ||||||||||| |||||| |||||||||||    
T  7158234 ttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcattt 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 12929290 - 12929387
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  12929290 ttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 37284106 - 37284190
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    ||||| |||||||||| |||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  37284106 aaaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 37284190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 27479990 - 27480103
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||||||||||||| |  ||||||||||||| ||||||||||||||||||| ||||||||| |||||  | ||||||||| |    
T  27479990 ttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatttga 27480089  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  27480090 aagttcgtccctct 27480103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 37289413 - 37289329
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    ||||| |||||||||| |||||| |||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  37289413 aaaggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgccc 37289329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 22661362 - 22661473
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||| ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||||| |||||  | ||||||||| | |    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  22661462 gttcgtccctct 22661473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 27480849 - 27480731
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||||| |||| ||||||||| | ||||||||||||||  |||  ||||||||||| ||||||||||| |||||  | ||||||    
T  27480849 aaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatca 27480750  T
Q  199 tttaagatttcgtccctct 217  Q
    ||| | | |||||||||||    
T  27480749 tttgaaagttcgtccctct 27480731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 32053480 - 32053427
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  32053480 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 32053427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 31695709 - 31695637
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatttt 178  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||| || | |||||||||||| |||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 31695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 31694467 - 31694546
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    |||||||| ||||||||||||||| ||||||| |||||  |||||||  ||||||| || |  |||||||||||||||||    
T  31694467 aaaaggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 40022623 - 40022517
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    ||||||| ||||||| ||||||| ||||| ||||||||  ||||||| |||| |||||||||||| |||||||| |  || ||| ||||| ||||| |||    
T  40022623 aaatatgtatttcatccctgcaaatatag-tcatttgaaatttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatttgaga 40022525  T
Q  206 tttcgtcc 213  Q
     |||||||    
T  40022524 attcgtcc 40022517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 40397645 - 40397564
Alignment:
Q  248 cagcaaattaggggttgtgttgacaaaaatacccttggcttgttcagaccaatgcacaatgaccaaagagcccctgacttcat 330  Q
    ||||||||||||||  ||| |||| ||||||   |||||||||| ||| ||||||||||||||||||| || |||||||||||    
T  40397645 cagcaaattaggggc-gtgctgacgaaaatatgattggcttgtttagaacaatgcacaatgaccaaagtgctcctgacttcat 40397564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 47559106 - 47559044
Alignment:
Q  159 cttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctctcctc 221  Q
    ||||||||||||||||||||  || |||||||||||| ||||||| |||| || |||||||||    
T  47559106 cttactaatcctcccattttctccctgtaaaaattaaccatttaaaattttgttcctctcctc 47559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 2640515 - 2640462
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| ||||||| ||||||||    
T  2640515 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaa 2640462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 23181331 - 23181278
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||| ||||||||    
T  23181331 ttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaa 23181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 27396932 - 27396883
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtca 241  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||    
T  27396932 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 28469345 - 28469292
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||  |||||||||||    
T  28469345 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaa 28469292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 40379860 - 40379913
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| | || |||||||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaa 40379913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 42731510 - 42731563
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  42731510 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 42731563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 7159315 - 7159213
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||   ||||| ||||||| ||||| |||||||| ||||| |  ||||  ||||||||||||||||||| ||| || ||| |||||||    
T  7159315 aaaggcttaaatatgtcattcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccattttaccc-tgcaaatattaatc 7159217  T
Q  198 attt 201  Q
    ||||    
T  7159216 attt 7159213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 19979980 - 19980050
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||| |||||||| ||||  ||||||||| | |||||||||| ||| ||| |||||||||||    
T  19979980 tataggtcatttgaattttcatc-ctgaagttactaatcattccattttgccgttgcaaatattaatcattt 19980050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 27558215 - 27558136
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| ||   ||  ||||||||||| |||||||||| ||| ||| |||||||||||    
T  27558215 cctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcattt 27558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 43937923 - 43937994
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||| |||||||| ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  43937923 tataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 43937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 6571104 - 6571150
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| |||| |||||||||| |||||||| |||||||||    
T  6571104 ttaatcatttaaaattttgtccctctccccacttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 17102111 - 17102157
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  17102111 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 27991830 - 27991876
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  27991830 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 30948466 - 30948420
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 32680901 - 32680855
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 10935885 - 10935938
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||  |||||||| |||| || ||||||||    
T  10935885 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaa 10935938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 42019934 - 42019881
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||| |||||| |||||||| ||||||||||||||| |||| || ||||||||    
T  42019934 ttaattatttaaaatttcgtctctctcctcacttaatcactgccatgtcactaa 42019881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 45010689 - 45010742
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||| ||||| |||||||| |||| || ||||||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcactaa 45010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 26825626 - 26825730
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||  |||| | |||| || |||||||||||||| ||||| || ||||  ||||||||| | ||| | ||||| || ||| ||||||    
T  26825626 aaaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaat 26825725  T
Q  197 cattt 201  Q
    |||||    
T  26825726 cattt 26825730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 26825826 - 26825890
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    ||||||| | ||||||| ||||||| |||||||||||||| ||||| || ||||  |||||||||    
T  26825826 ttaaataggtatttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 26825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 32688570 - 32688506
Alignment:
Q  177 ttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtca 241  Q
    ||||||||| ||| ||||||||||||| |||||||||||   | |||||||| |||| |||||||    
T  32688570 ttgcccttgcaaatattaatcatttaaaatttcgtcccttgacccacttaataactgccacgtca 32688506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 45010941 - 45010893
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtc 240  Q
    |||||||||||| |||||||| |||||| |||||||| |||| ||||||    
T  45010941 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 104 - 287
Target Start/End: Original strand, 13612 - 13795
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  13612 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcatttaa 13711  T
Q  204 gatttcgtccctctcctcacttaattactgtcacgtcactaagtcagcaaattaggggttgtgttgacaaaaatacccttggct 287  Q
    |||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13712 gatttcgtccctctccccacttaatcactaccacgtcactaagtcagcaaattaggggttgtgttgacaaaaatacccttggct 13795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 14690 - 14551
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  14690 ttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcatttaa 14591  T
Q  204 gatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    |||||||||||||||| |||||||| |||| ||| |||||    
T  14590 gatttcgtccctctccccacttaatcactgccacatcact 14551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 104 - 287
Target Start/End: Original strand, 25064936 - 25065119
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| || || | ||||||||||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  204 gatttcgtccctctcctcacttaattactgtcacgtcactaagtcagcaaattaggggttgtgttgacaaaaatacccttggct 287  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25065036 gatttcgtccctctcctcacttgatcactgccacgtcactaagtcagcaaattagggggtgtgttgacaaaaatacccttggct 25065119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 25066063 - 25065916
Alignment:
Q  96 taaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaa 195  Q
    ||||||||||||||||||||||||| |||  ||||||| | |||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||    
T  25066063 taaaaggtttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaa 25065964  T
Q  196 tcatttaagatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    |||||||||||||||||||||||  |||||||| |||| ||| |||||    
T  25065963 tcatttaagatttcgtccctctctccacttaatcactgccacctcact 25065916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 13295133 - 13295251
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| ||||||||||||||||  |||| |||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||    
T  13295133 aaggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatca 13295232  T
Q  199 tttaagatttcgtccctct 217  Q
    ||||| || ||||||||||    
T  13295233 tttaaaatgtcgtccctct 13295251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 242 - 370
Target Start/End: Original strand, 27998136 - 27998260
Alignment:
Q  242 ctaagtcagcaaattaggggttgtgttgacaaaaatacccttggcttgttcagaccaatgcacaatgaccaaagagcccctgacttcatcttctcatctc 341  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| ||| || |||   ||||||||||||    
T  27998136 ctaagtcagcaaattaggggttgtgctgacaaaaatacccttggcttgttcagaccaatgaacaatga-caaagtgccgctaact---tcttctcatctc 27998231  T
Q  342 tcatcgtcatcaacccagaacttctgttc 370  Q
    ||||| |||||| || ||||||| |||||    
T  27998232 tcatcatcatcatcctagaacttatgttc 27998260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 32619389 - 32619484
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||| |||||| |||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcattt 32619484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 46282074 - 46282187
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||  |||||| |||| ||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  46282074 ttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 46282173  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  46282174 aagttcgtccctct 46282187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 6345732 - 6345625
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    ||||||||||||||| ||||||||||  ||||||||||  ||||||| |||| |||||||||||| ||||||||||| || ||| ||||| ||||||| |    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  206 tttcgtcc 213  Q
    ||| ||||    
T  6345632 tttagtcc 6345625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 46282888 - 46282777
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| | |    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  46282788 gttcgtccctct 46282777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 13295682 - 13295608
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccc 173  Q
    |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  13295682 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 32622451 - 32622369
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaa 188  Q
    |||||||  |||||| |||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaa 32622369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 51935296 - 51935218
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||||||||| |||||| | || ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  51935296 ttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgccc 51935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 49093044 - 49093157
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||| |||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  49093044 ttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatttga 49093143  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  49093144 aagttcgtccctct 49093157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 2828190 - 2828293
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||  | | |||||||||||| | ||||||||  || ||| |||||||    
T  2828190 aaaggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatc 2828289  T
Q  198 attt 201  Q
    ||||    
T  2828290 attt 2828293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 6344260 - 6344355
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||| |||| |||||  ||||||||||  |||||||  ||| ||||||||||||||||||||||||||| ||| ||||| |||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacattt 6344355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 50063043 - 50062932
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||  |||||  | ||||||||| | |    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  50062943 gttcgtccctct 50062932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 2829643 - 2829539
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgat-------ttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    ||||||||||||||||| ||| |||||||||||||||||||       ||||||||  |||||||||||||||||||||||| ||| || ||| ||||||    
T  2829643 ttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaat 2829544  T
Q  197 cattt 201  Q
    |||||    
T  2829543 cattt 2829539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 32238704 - 32238779
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcc 181  Q
    ||||||||||||||| ||||||| ||||||  ||||||  ||||||| |||| |||||||||||||||||||||||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcc 32238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 10019728 - 10019657
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||| |||||||| ||||  ||||||||||| |||||||||| ||| ||| |||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcattt 10019657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 49093875 - 49093797
Alignment:
Q  139 tttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctct 217  Q
    |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| | | |||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctct 49093797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 1103552 - 1103605
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||    
T  1103552 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaa 1103605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 6367653 - 6367706
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  6367653 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 6367706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 14879062 - 14879115
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||    
T  14879062 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaa 14879115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 40210707 - 40210654
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  40210707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 40210654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 46163121 - 46163174
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||||||||||| ||||||||    
T  46163121 ttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcactaa 46163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 52563656 - 52563748
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    ||||||||||||||| ||||||| ||||||  |||||   |||||||  |||| ||||||||||||||||||||||  || ||| ||||||||    
T  52563656 aaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatca 52563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 34850414 - 34850351
Alignment:
Q  180 cccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    |||||| |||| |||||||||||| ||||| ||||||||| |||||||| |||| |||||||||    
T  34850414 cccttgcaaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcact 34850351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 1047590 - 1047488
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||||| |||| || |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| ||||||||    
T  1047590 aaggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatca 1047491  T
Q  199 ttt 201  Q
    |||    
T  1047490 ttt 1047488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 13245936 - 13245994
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| |||| |||||||||| |||||||| ||||||||||||||||    
T  13245936 aaaatttaatcacttaaaattttgtccctctccccacttaatcactgtcacgtcactaa 13245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 34849090 - 34849152
Alignment:
Q  180 cccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||||| |||| |||||||||||| ||||||||||||||| | |||||| |||| ||||||||    
T  34849090 cccttgcaaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtcac 34849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 37578530 - 37578476
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||||| |||||||| |||||| |||||||| |||| |||||||||||    
T  37578530 attaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaa 37578476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 2953845 - 2953748
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  2953845 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 2953748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 4960631 - 4960684
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||| | |||||||| |||| |||||||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaa 4960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 10303998 - 10304055
Alignment:
Q  176 tttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||  |||| |||||||||||| ||||||||||||||| |||||||| ||||    
T  10303998 tttgcccttccaaaatttaatcatttaaaatttcgtccctctccccacttaatcactg 10304055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 13914404 - 13914351
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||| ||| |||| |||||||||||    
T  13914404 ttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaa 13914351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 16970889 - 16970836
Alignment:
Q  175 ttttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaat 228  Q
    |||||||  ||||||| |||||||||||| ||||||||||||||| ||||||||    
T  16970889 ttttgccactgtaaaatttaatcatttaaaatttcgtccctctccccacttaat 16970836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 17662187 - 17662134
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||| | |||||||| |||| |||||||||||    
T  17662187 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaa 17662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 22103871 - 22103790
Alignment:
Q  164 taatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||| | ||||||||||   |||| ||||||| |||| ||||||||||||||  |||||||| |||| |||||||||||    
T  22103871 taatcctgctattttgccctgtcaaaatttaatcacttaaaatttcgtccctctctccacttaatcactgccacgtcactaa 22103790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 24009878 - 24009825
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||| |||||||    
T  24009878 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 24009825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 42248564 - 42248617
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||| |||||    
T  42248564 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtgactaa 42248617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 5926540 - 5926619
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  5926540 cctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcattt 5926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 19755768 - 19755689
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| |||| ||| ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  19755768 cctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 19755689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 31514624 - 31514577
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    ||||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  31514624 attaatcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 33347779 - 33347700
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| ||  |||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  33347779 cctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcattt 33347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 46850021 - 46849942
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| || ||||  ||||| ||||| ||| ||||||| || ||| |||||||||||    
T  46850021 cctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcattt 46849942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 49002869 - 49002976
Alignment:
Q  94 aataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaatt 193  Q
    |||| ||| ||||||||||  |||| | ||||||| |||||||||||||| ||||| ||  |||  ||||||||||| ||| | ||||| || ||| |||    
T  49002869 aatataagttttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatatt 49002968  T
Q  194 aatcattt 201  Q
    ||||||||    
T  49002969 aatcattt 49002976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 183528 - 183482
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  183528 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 21444680 - 21444738
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| ||||||||| ||||| |||||||| |||| |||||||||||    
T  21444680 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaa 21444738  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 24905473 - 24905427
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 25647975 - 25648021
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  25647975 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 28011454 - 28011500
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 28534893 - 28534820
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatttt 178  Q
    ||||||||||||||| ||| || || |||||| |||||||  ||||||| |||| |||||||||||| |||||||    
T  28534893 ttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccatttt 28534820  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 33442900 - 33442854
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T

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Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 42267389 - 42267447
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| |||||||||||| |||||||| |||||| |||||||| |||  |||||||||||    
T  42267389 aaaatttaatcatttaatatttcgtctctctccccacttaatcactaccacgtcactaa 42267447  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 1841550 - 1841603
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| || ||||||||    
T  1841550 ttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaa 1841603  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 29980999 - 29980922
Alignment:
Q  124 tgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||| |||||||||||||| ||||| || | ||  ||||||||||| ||| ||||||| || ||| |||||||||||    
T  29980999 tgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcattt 29980922  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 30711418 - 30711471
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||||||| || |||||||| |||| || ||||||||    
T  30711418 ttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcactaa 30711471  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 32917351 - 32917404
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| ||| |||||||    
T  32917351 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcactaa 32917404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 34464786 - 34464733
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||| |||||||||| |||||||| |||| || ||||||||    
T  34464786 ttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcactaa 34464733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 43758913 - 43758966
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||  |||||||| |||| || ||||||||    
T  43758913 ttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaa 43758966  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 44523473 - 44523420
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||| |||||| | ||||||||| |||| |||||||||||    
T  44523473 ttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaa 44523420  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 50062246 - 50062319
Alignment:
Q  144 tttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctct 217  Q
    ||||||||| |||| |||||||||||| ||||||||| | |||||  | ||||||||| | | |||||||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtccctct 50062319  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 40772598 - 40772634
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaat 228  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  40772598 ttaatcatttaaaatttcgtccctctccccacttaat 40772634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 4e-52; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 425 - 557
Target Start/End: Original strand, 38235272 - 38235404
Alignment:
Q  425 tcaaaatcaccaccacgtattgttgaagaggaatctgtgaaagaggttctatttgaaaaagaaacaccaatttttaaaccccaacaagttccttatttga 524  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||  ||||||    
T  38235272 tcaaaatcaccaccacatattgttgaagaggaatctgtgaaagaagttctatttgaaacagaaacaccaatttccaaaccccaacaagttccaaatttga 38235371  T
Q  525 cacaagaaacaatgacccaaatgcaaaatatgg 557  Q
    |||||||||||||||||||||||||||||||||    
T  38235372 cacaagaaacaatgacccaaatgcaaaatatgg 38235404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 25623278 - 25623404
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaa 190  Q
    ||||||||| || ||||||||||||||||| |||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  25623278 aaaaataaatggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaa 25623377  T
Q  191 attaatcatttaagatttcgtccctct 217  Q
    ||||||||||||| |||||||||||||    
T  25623378 attaatcatttaaaatttcgtccctct 25623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 25624530 - 25624417
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  25624530 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcatttaa 25624431  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  25624430 aatttcgtccctct 25624417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 24387354 - 24387451
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  24387354 ttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcattt 24387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 24388353 - 24388255
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattta 202  Q
    ||||||||||||||||| |||||||||||| |  ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24388353 ttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcattta 24388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 20101773 - 20101851
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||||||||| |||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  20101773 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgccc 20101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 29957814 - 29957933
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | |||||    
T  29957814 aaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 29957913  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  29957914 atttgaaagttcgtccctct 29957933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 20982515 - 20982624
Alignment:
Q  92 aaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaa 191  Q
    |||| |||||| |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  |    
T  20982515 aaaaaaaaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaatta 20982614  T
Q  192 ttaatcattt 201  Q
     |||||||||    
T  20982615 ctaatcattt 20982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 20103246 - 20103163
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||| |||||||||| ||| || |||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  20103246 aaggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgccc 20103163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 20983358 - 20983245
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||  | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  20983358 ttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20983259  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  20983258 aagttcgtccctct 20983245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 19620886 - 19620793
Alignment:
Q  108 atatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||| | ||| ||| ||||||||||||||  ||||||| |||| |||||||||||| ||||||||||| || ||| |||||||||||    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcattt 19620793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 29958644 - 29958566
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||||||||  |||||| |||| |||||||||   |||||||||||||| |||| |||||||||||| |||||||||||    
T  29958644 ttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgccc 29958566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 2318249 - 2318302
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  2318249 ttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaa 2318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 15848179 - 15848232
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  15848179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 15848232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 36755184 - 36755237
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| ||||||||||||||||    
T  36755184 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaa 36755237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 37895684 - 37895631
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  37895684 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 37895631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 33881572 - 33881672
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||||| ||||||||||||||| |||| || |||||| |||||||  ||||||| || || ||| |||| |||||||||||||  || ||| |||||||    
T  33881572 aaaggttaaaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatc 33881671  T
Q  198 a 198  Q
    |    
T  33881672 a 33881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 43236509 - 43236577
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccca 174  Q
    |||||||||||| || ||||||| |||||| |||||||  ||||||| |||| ||||||||||||||||    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 33882967 - 33882892
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcc 181  Q
    ||||||||||||||| ||||||| |||| | |||||||  ||||||   |||| ||||||||||||||||||||||    
T  33882967 aaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttgcc 33882892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 10840562 - 10840620
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||||||||  |||||||||||| | |||||||| ||||||||||||||||    
T  10840562 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtcactaa 10840620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 11721432 - 11721374
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| |||||||| |||||| |||||||| ||||||||||||||||    
T  11721432 aaaatttaatcacttaaaatttcgtctctctccccacttaatcactgtcacgtcactaa 11721374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 9694103 - 9694026
Alignment:
Q  124 tgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||| |||||||||||||| ||||| || ||||  ||||||||||| |||||||| | ||| ||| |||||||||||    
T  9694103 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcattt 9694026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 36382252 - 36382305
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||| ||||||||| |||||||| |||| |||||||||||    
T  36382252 ttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaa 36382305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 39423606 - 39423659
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  39423606 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 39423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 44714098 - 44714045
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  44714098 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 44714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 1150325 - 1150221
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  |||||||||||  || | ||||| || ||| ||||||    
T  1150325 aaaaggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaat 1150226  T
Q  197 cattt 201  Q
    |||||    
T  1150225 cattt 1150221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 7983905 - 7983837
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccca 174  Q
    |||||||||||||||  | |||| ||||||||||||||  |||||||  ||| ||||||||||||||||    
T  7983905 aaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 16366959 - 16367063
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||  |||| | |||| || |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| ||||||    
T  16366959 aaaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 16367058  T
Q  197 cattt 201  Q
    |||||    
T  16367059 cattt 16367063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 20911126 - 20911230
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| ||||||| |  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| ||||||    
T  20911126 aaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 20911225  T
Q  197 cattt 201  Q
    |||||    
T  20911226 cattt 20911230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 37985090 - 37985011
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||| ||||||||||||||| || ||||  ||||||||||| ||| ||||||  || |||| ||||||||||    
T  37985090 cctgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatcattt 37985011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 1149935 - 1150037
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| ||||||| | ||||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| |  |||| || ||| ||||||||    
T  1149935 aaggcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatca 1150034  T
Q  199 ttt 201  Q
    |||    
T  1150035 ttt 1150037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 1696046 - 1696000
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactgtcacg 1696000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 6657969 - 6658015
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  6657969 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 6846856 - 6846922
Alignment:
Q  173 cattttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgt 239  Q
    ||||||| || || |||| | |||||||||| ||||||||||||| | ||||||||||||| |||||    
T  6846856 cattttgtccctgcaaaattgaatcatttaaaatttcgtccctcttcccacttaattactgccacgt 6846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 11689627 - 11689685
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| ||||||||| ||||| |||||||| |||| |||||||||||    
T  11689627 aaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaa 11689685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 14900789 - 14900743
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 16099146 - 16099192
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  16099146 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 17266484 - 17266534
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcac 237  Q
    |||| |||||||||||| |||| |||||||||| |||||||| ||||||||    
T  17266484 aaaatttaatcatttaaaatttggtccctctccccacttaatcactgtcac 17266534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 18476905 - 18477007
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||||||||||| || |||| | ||||||| |||||||||||||| ||||  || ||||  ||||||||||| ||| | ||||  || |||| |||||||    
T  18476905 aaggtttaaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatca 18477004  T
Q  199 ttt 201  Q
    |||    
T  18477005 ttt 18477007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 33739794 - 33739840
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 39498401 - 39498447
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  39498401 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 6848099 - 6848022
Alignment:
Q  164 taatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtca 241  Q
    |||||||  ||||||| || || |||| |||||||||||| ||||||||| || || ||||||||||||  |||||||    
T  6848099 taatcctgacattttgtccctgaaaaatttaatcatttaaaatttcgtccatcaccccacttaattactaccacgtca 6848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 7981051 - 7981120
Alignment:
Q  105 taaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccca 174  Q
    |||| ||||||||  | ||||||| ||||||||||||||  ||||||| | || ||||||||||||||||    
T  7981051 taaaaatgcattttctccctgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 10446835 - 10446932
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||| ||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  10446835 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 10712814 - 10712867
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||| ||||||||| |||||||| |||  |||||||||||    
T  10712814 ttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaa 10712867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 11163360 - 11163319
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  11163360 ttaatcatttaaaatttcgtccctctccccacttaatcactg 11163319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 25892485 - 25892538
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| | ||||||||||||| ||||||||||||  |||||| ||||    
T  25892485 ttaatcatttaaaaattcgtccctctccccacttaattactaccacgtctctaa 25892538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 28599426 - 28599527
Alignment:
Q  100 aggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcat 199  Q
    ||||||||||| |  |||| | | ||||| ||||| |||||||| ||||| ||  |||  ||||||||||| |||||||||| ||| ||| |||||||||    
T  28599426 aggtttaaataggtctttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcat 28599525  T
Q  200 tt 201  Q
    ||    
T  28599526 tt 28599527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 32519158 - 32519255
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||| | || ||| |||||||||||    
T  32519158 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcattt 32519255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 36479809 - 36479862
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||| ||||| |||||||| |||| || ||||||||    
T  36479809 ttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaa 36479862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 43237815 - 43237747
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccca 174  Q
    ||||||||||||  | ||||||| |||||| |||||||  ||| ||| |||| ||||||||||||||||    
T  43237815 aaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 32717202 - 32717065
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| || | |||||||||||| ||||||||||| ||||||||||||||||||||    
T  32717202 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatttaa 32717103  T
Q  204 gatttcgtccctctcctcacttaattactgtcacgtca 241  Q
     ||||||||||||| | || |||||||||| |||||||    
T  32717102 aatttcgtccctcttcccaattaattactgccacgtca 32717065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 97 - 241
Target Start/End: Complemental strand, 29193097 - 29192953
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  29193097 aaaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaat 29192998  T
Q  197 catttaagatttcgtccctctcctcacttaattactgtcacgtca 241  Q
     |||||| |||| |||||||| | |  ||||| ||||||||||||    
T  29192997 tatttaaaattttgtccctcttcccgattaatcactgtcacgtca 29192953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 29192040 - 29192188
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||||||| || |||||||| |||||||||||||||||||| |    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  206 tttcgtccctctcctcacttaattactgtcacgtcactaagtcagcaaa 254  Q
    |||||||||||| | |  ||||| |||| ||||||| ||| | ||||||    
T  29192140 tttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaa 29192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 22736787 - 22736690
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  | |||||||||    
T  22736787 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcattt 22736690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 37249204 - 37249317
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||||||||||||| | |||||||||||||| ||||||||| ||||||||||||||||||| |||||  | ||||||||| | |    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  206 tttcgtccctctcc 219  Q
     |||||||||||||    
T  37249304 gttcgtccctctcc 37249317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 37249892 - 37249782
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||||  | ||||||||| | |    
T  37249892 aaatatgcttttcat-cctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  37249793 gttcgtccctct 37249782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 2943916 - 2944029
Alignment:
Q  104 ttaaatatgcatttc-attcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattta 202  Q
    |||||||||| |||| || |||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||     
T  2943916 ttaaatatgcttttctatccctgcaattataggccgtttgatttttcatc-ctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttg 2944014  T
Q  203 agatttcgtccctct 217  Q
    | | |||||||||||    
T  2944015 aaagttcgtccctct 2944029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 48189209 - 48189083
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaa 190  Q
    ||||| |||||| |||||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||| |||||      
T  48189209 aaaaaaaaaaggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaatt 48189110  T
Q  191 attaatcatttaagatttcgtccctct 217  Q
    | ||||||||| | | |||||||||||    
T  48189109 actaatcatttgaaagttcgtccctct 48189083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 45279381 - 45279268
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  45279381 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 45279282  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  45279281 aagttcgtccctct 45279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 44482048 - 44481953
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||| |||||| |||| |||||| || ||||||||||||||||  |||||||||||||||||||||||||||| |||||  | |||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcattt 44481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 2944763 - 2944650
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||  ||||||||||| |||||  | ||||||||| |    
T  2944763 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatttga 2944664  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  2944663 aagttcgtccctct 2944650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 11026729 - 11026616
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| ||||| |||||| ||||||||||| |||||  | ||||||||| |    
T  11026729 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatttga 11026630  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  11026629 aagttcgtccctct 11026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 32716285 - 32716365
Alignment:
Q  137 catttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctct 217  Q
    |||||||||||| |||  |||| |||||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||    
T  32716285 catttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtccctct 32716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 45278549 - 45278660
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||| ||||||||| | |||||||||||||| ||||  ||||||||||| ||||||||||| |||||  | ||||||||| | |    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  45278649 gttcgtccctct 45278660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 48188383 - 48188494
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||  |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| | |    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  48188483 gttcgtccctct 48188494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 44476054 - 44476130
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||||||  |||||| |||| |||||| || |||||||||||||||| |||| ||||||||||||||||||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgccc 44476130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 1757406 - 1757304
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||||| |||| ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||||| |||||  | ||||||    
T  1757406 aaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatca 1757307  T
Q  199 ttt 201  Q
    |||    
T  1757306 ttt 1757304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 43105920 - 43105818
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccc 214  Q
    |||||| |||| ||||||||| | |||||||||||||| |||| ||||||||||||  |||||||||| |||||  | ||||||||| | | ||||||||    
T  43105920 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtccc 43105821  T
Q  215 tct 217  Q
    |||    
T  43105820 tct 43105818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 26463935 - 26463882
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 26463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 1756576 - 1756666
Alignment:
Q  127 aattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatttcgtccctct 217  Q
    ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||||| |||||  | ||||||||| | | |||||||||||    
T  1756576 aattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctct 1756666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 1741390 - 1741487
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  1741390 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcattt 1741487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 9294295 - 9294242
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||    
T  9294295 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaa 9294242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 33689716 - 33689663
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  33689716 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 33689663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 41988037 - 41988106
Alignment:
Q  176 tttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||| | |||| |||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||    
T  41988037 tttgccctcgcaaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcactaa 41988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 51994223 - 51994173
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||||||    
T  51994223 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 55036669 - 55036771
Alignment:
Q  101 ggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatt 200  Q
    |||||||||| |  |||| | ||||||| |||||||||||||| |||||||  ||||  ||||||||||| ||| | ||||| || ||| ||||||||||    
T  55036669 ggtttaaataggtctttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 55036768  T
Q  201 taa 203  Q
    |||    
T  55036769 taa 55036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 23458316 - 23458263
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||| |||||||    
T  23458316 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 23458263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 33156331 - 33156278
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||||||| || |||||||| |||| |||||||||||    
T  33156331 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaa 33156278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 40758235 - 40758288
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||  |||||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaa 40758288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 43105259 - 43105320
Alignment:
Q  127 aattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaa 188  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||  |||||||||| |||||    
T  43105259 aattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaa 43105320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 43384374 - 43384427
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| ||||||| ||||||||    
T  43384374 ttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaa 43384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 46670610 - 46670537
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||||||| |||||||| ||||  |||||||| || |||||||| | ||| ||| |||||||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaa 46670537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 22735403 - 22735459
Alignment:
Q  145 ttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||| || |||||||||||||||||||||||||| |||||  | |||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcattt 22735459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 30890236 - 30890307
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||| |||||||| |||||||| ||||  ||||||||| | | |||||||| ||||||| |||||||||||    
T  30890236 tatagatcatttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcattt 30890307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 44654845 - 44654790
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||| ||||||| |||| ||||||||||||||| || ||||| |||||||||||||    
T  44654845 aaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 2796270 - 2796316
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  2796270 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 8041707 - 8041753
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 10770797 - 10770751
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 10998235 - 10998157
Alignment:
Q  123 ctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  10998235 ctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 11025975 - 11026017
Alignment:
Q  139 tttgatttttcatcactgagcttactaatcctcccattttgcc 181  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  11025975 tttgatttttcatccctgaacttactaatccttccattttgcc 11026017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 20704669 - 20704611
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| ||||||||||||| | |||||||| || |||||||||||||    
T  20704669 aaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaa 20704611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 21255901 - 21255815
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||| ||||||||| ||||| |||||||| ||||| ||  | |  |||||||| || |||||||||| ||||||| |||||||||||    
T  21255901 tttcgttcctgcaaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcattt 21255815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 36314604 - 36314558
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 552
Target Start/End: Original strand, 37609645 - 37609699
Alignment:
Q  498 ttaaaccccaacaagttccttatttgacacaagaaacaatgacccaaatgcaaaa 552  Q
    ||||||| |||||||||||  |||||||| |||||| ||||||||| ||||||||    
T  37609645 ttaaacctcaacaagttccaaatttgacataagaaataatgacccatatgcaaaa 37609699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 48322683 - 48322637
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 54466514 - 54466560
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 21300340 - 21300393
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||  |||||||||    
T  21300340 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 40033793 - 40033748
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcac 237  Q
    |||||||||||| |||| |||||||||| |||||||| ||||||||    
T  40033793 ttaatcatttaaaattttgtccctctccccacttaatcactgtcac 40033748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 40256897 - 40256974
Alignment:
Q  124 tgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||| ||||||| |||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  40256897 tgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcattt 40256974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 40506124 - 40506071
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| ||||||| || |||||    
T  40506124 ttaatcatttaaaatttcgtctctctccgcacttaatcactgtcatgtaactaa 40506071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 55037054 - 55036953
Alignment:
Q  100 aggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcat 199  Q
    |||||||||||||  |||| | ||||||| |||||||||||||| ||||| |   |||  ||||||||||| ||| | ||||| || ||| |||||||||    
T  55037054 aggtttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcat 55036955  T
Q  200 tt 201  Q
    ||    
T  55036954 tt 55036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 39030573 - 39030477
Alignment:
Q  4 cgagtgagatgaagagaggccaaagagttaagagagggaatgagaaaaatgtgaaggagtgaatcaacttatatatcacatatcgttaaaaataaaa 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030573 cgagtgagattaagagaggccaaagagttaagagaggaaatgagaaaaatgtgaaggagtgaatcaacttatatatcacatatcgttaaaaataaaa 39030477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 34213761 - 34213880
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||| |||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||    
T  34213761 aaaggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatc 34213860  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  34213861 atttgaaagttcgtccctct 34213880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 38598962 - 38599064
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||||||| || ||| ||||||||    
T  38598962 aaggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatca 38599061  T
Q  199 ttt 201  Q
    |||    
T  38599062 ttt 38599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 1231529 - 1231626
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| ||| |||||||||| | ||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  1231529 ttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcattt 1231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 25288173 - 25288076
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| || ||| |||||||||||    
T  25288173 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcattt 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 33497726 - 33497635
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    ||||| |||||| |||||||||| |||||| |||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  33497726 aaaaaaaaaaggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgccc 33497635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 1232894 - 1232799
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||    ||||||||||||||||| ||||||||||||||||||    
T  1232894 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcattt 1232799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 7393242 - 7393145
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  || || ||| |||||||||||    
T  7393242 ttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcattt 7393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 34665773 - 34665886
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  34665773 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 34665872  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  34665873 aagttcgtccctct 34665886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 4970130 - 4970225
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||| ||||||||||  ||||||||||  ||||||| |||| |||||||||||| ||||||||||| || ||| ||||| |||||    
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcattt 4970225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 24377186 - 24377281
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| ||||||||  ||||||||||  ||||||| |||| |||||||||||||||||||| ||| || ||| ||||| |||||    
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcattt 24377281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 34214631 - 34214512
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttca-tcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    |||| |||||||||| |||||| |||| ||||||||| | |||||||||||| || |||| |||||||||||| ||||||||||| |||||  | |||||    
T  34214631 aaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatc 34214532  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  34214531 atttgaaagttcgtccctct 34214512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 33497020 - 33497100
Alignment:
Q  105 taaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttg 185  Q
    ||||||||  |||||||| || |||||||||||||||||||||||||   ||| |||||||||||| ||||||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttg 33497100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 24379089 - 24379015
Alignment:
Q  108 atatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    ||||||||||||| ||||||||||  ||||||||||| |||||||  ||| |||||||||||||| |||||||||    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgccc 24379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 4463528 - 4463455
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcc 172  Q
    |||| ||||||||||||||||| ||||||| |||||| |||||||  ||||||| |||| ||||||||||||||    
T  4463528 aaggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcc 4463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 29574747 - 29574819
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatttt 178  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||| || | |||||||||||| |||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 29574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 34666635 - 34666525
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||  ||||||  ||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| | |    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgccc-tgtaattactaatcatttgaaa 34666537  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  34666536 gttcgtccctct 34666525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 4405997 - 4405944
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||| | |||||||| ||||||||||||||||    
T  4405997 ttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcactaa 4405944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 16388863 - 16388810
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  16388863 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 16388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 36928567 - 36928620
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  36928567 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 36928620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 31608849 - 31608797
Alignment:
Q  193 taatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 31608797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 29575989 - 29575910
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    |||||||| ||||||||||||||| ||||||| |||||  |||||||  ||||||| || |  |||||||||||||||||    
T  29575989 aaaaggttaaaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 29575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 36574807 - 36574890
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctccca 174  Q
    ||||| |||||| | |||||||||||||||  |||||  |||||| |||||||  ||||||| |||| ||||||||||||||||    
T  36574807 aaaaaaaaaaggctaaaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 23698581 - 23698535
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||    
T  23698581 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 9632351 - 9632428
Alignment:
Q  124 tgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||| |||||||||||||| ||||| || ||||  ||||||||||| |||||||| | ||| ||| |||||||||||    
T  9632351 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcattt 9632428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 13186151 - 13186204
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| |||||||||||    
T  13186151 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactaa 13186204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 27436566 - 27436643
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcc 181  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||| || ||||  ||||||||| |  |||||||||    
T  27436566 ttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27436643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 27857127 - 27857026
Alignment:
Q  100 aggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcat 199  Q
    |||||||||||||  |||| | ||||||| |||||| ||||||| ||||| || ||||  ||||||||| | ||| | |||||||| ||| |||||||||    
T  27857127 aggtttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcat 27857028  T
Q  200 tt 201  Q
    ||    
T  27857027 tt 27857026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 35756673 - 35756726
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  35756673 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 35756726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 39071767 - 39071820
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| | |||||||||    
T  39071767 ttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcactaa 39071820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 40318301 - 40318248
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||| |||||||||||||| |||| || ||||||||    
T  40318301 ttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcactaa 40318248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 1425359 - 1425313
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  1425359 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 3041762 - 3041716
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 7392250 - 7392308
Alignment:
Q  143 atttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||| |||| ||||||||||||||||||||  || || ||| |||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcattt 7392308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 23663851 - 23663805
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  23663851 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 24085860 - 24085918
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||  |||| |||| |||||||||| |||||||| ||||||||||||||||    
T  24085860 aaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaa 24085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 36325325 - 36325371
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 38845605 - 38845559
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 40775956 - 40775910
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 44407163 - 44407117
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 23424893 - 23424796
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||| || ||||  ||||||||| | ||| | ||||| || ||| |||||||||||    
T  23424893 ttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcattt 23424796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 27437616 - 27437539
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcc 181  Q
    ||||||||||||||||| ||||||| |||||| | ||||| ||||| || ||||  ||||||||| |  |||||||||    
T  27437616 ttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27437539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 29190548 - 29190443
Alignment:
Q  96 taaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaa 195  Q
    ||||||||||||||| |  |||| | ||||||| |||||  ||||||| |||| ||| ||||  ||||||||||| ||| | ||||| || ||| |||||    
T  29190548 taaaaggtttaaataggtctttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaa 29190449  T
Q  196 tcattt 201  Q
    ||||||    
T  29190448 tcattt 29190443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||  |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 37342989 - 37343042
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||  |||||||||    
T  37342989 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 38862709 - 38862750
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  38862709 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38862750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 38955794 - 38955835
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  38955794 ttaatcatttaaaatttcatccctctcctcacttaatcactg 38955835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 40422552 - 40422475
Alignment:
Q  93 aaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcct 170  Q
    |||||| ||| ||||||| |  |||||| ||||||| |||||||||||||| ||||| || ||||  |||||||||||    
T  40422552 aaataataggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 40422475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 41801819 - 41801916
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| |  ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  41801819 ttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 41801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 43866888 - 43866835
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||  |||||||||    
T  43866888 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 7392219 - 7392251
Alignment:
Q  100 aggtttaaatatgcatttcattcctgcaattat 132  Q
    ||||||||||||||||||||| |||||||||||    
T  7392219 aggtttaaatatgcatttcatccctgcaattat 7392251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 30710945 - 30710997
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    ||||||||||||| |||||||||||   | || ||||||||||||||||||||    
T  30710945 attaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtcact 30710997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 40525499 - 40525607
Alignment:
Q  93 aaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaat 192  Q
    |||| ||||| ||||||| |  |||| ||||||||| |||| ||||||||| ||||| || ||||  ||||||||||| ||| | ||||  || ||| ||    
T  40525499 aaattaaaggcttaaataagtctttcgttcctgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatat 40525598  T
Q  193 taatcattt 201  Q
    |||||||||    
T  40525599 taatcattt 40525607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 8e-41; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 22870559 - 22870446
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22870559 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 22870460  T
Q  204 gatttcgtccctct 217  Q
     |||||||| ||||    
T  22870459 aatttcgtctctct 22870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 22869612 - 22869721
Alignment:
Q  108 atatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaagatt 207  Q
    ||||||||||||| | || ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  208 tcgtccctct 217  Q
    ||||||||||    
T  22869712 tcgtccctct 22869721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 14744835 - 14744730
Alignment:
Q  96 taaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaa 195  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| || ||| |||||    
T  14744835 taaaaggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaa 14744736  T
Q  196 tcattt 201  Q
    ||||||    
T  14744735 tcattt 14744730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 20856935 - 20857048
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| |    
T  20856935 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857034  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  20857035 aatttcgtccctct 20857048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 36476770 - 36476881
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||||||| | |    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  36476870 gttcgtccctct 36476881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 20857644 - 20857531
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| | || ||||||||| | |||||||||||||  || |||||||||||||||||||||||||| ||||||| |||||||||| |    
T  20857644 ttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857545  T
Q  204 gatttcgtccctct 217  Q
     |||||||||||||    
T  20857544 aatttcgtccctct 20857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 36477471 - 36477358
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||| |||||  | ||||||||| | |    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  206 tttcgtccctctcc 219  Q
     |||||||||||||    
T  36477371 gttcgtccctctcc 36477358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 31107934 - 31108008
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatttt 178  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  31107934 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccatttt 31108008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 20072966 - 20072853
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  20072966 ttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20072867  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  20072866 aagttcgtccctct 20072853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 8654110 - 8654185
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttg 179  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8654110 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttg 8654185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 21978112 - 21978017
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||| |||||| |||| |||||| || |||||||||||||||| ||||||||||||||||||||| ||||||| |||||  | |||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcattt 21978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 21979082 - 21978971
Alignment:
Q  91 aaaaataaa-aggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaa 189  Q
    ||||||||| ||| ||||||||||||||||| |||||||||||| | ||||||||||||||||   || |||||||||||||| |||||  || ||||||    
T  21979082 aaaaataaataggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaa 21978983  T
Q  190 aattaatcattt 201  Q
    ||||||| ||||    
T  21978982 aattaataattt 21978971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 39181054 - 39181173
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||| |||||| |||| ||||||| | | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | |||||    
T  39181054 aaaggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 39181153  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  39181154 atttgaaagttcgtccctct 39181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 39181893 - 39181780
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||  ||| || |||| ||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  39181893 ttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181794  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  39181793 aagttcgtccctct 39181780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 16532898 - 16533009
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||| ||||||| ||||||||||| |||||  | ||||||||| | |    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  206 tttcgtccctct 217  Q
     |||||||||||    
T  16532998 gttcgtccctct 16533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 13962955 - 13963008
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13962955 ttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaa 13963008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 16533722 - 16533609
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||  ||||||||| | |||||||||||||| |||| |||| ||||||| ||||||||||| |||||  | ||||||||| |    
T  16533722 ttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcatttga 16533623  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  16533622 aagttcgtccctct 16533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 20072124 - 20072237
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| ||||||  ||| ||||||||| | |||||||||||||| |||| ||||||||||||  |||||||||| |||||  | ||||||||| |    
T  20072124 ttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttga 20072223  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  20072224 aagttcgtccctct 20072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 31108438 - 31108338
Alignment:
Q  100 aggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcat 199  Q
    ||||||||||||| ||||||| ||||||| |||||  ||||||||||||||||  ||| |||||||||| | |||||||  || |||||| |||||||||    
T  31108438 aggtttaaatatgtatttcatccctgcaaatataga-catttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcat 31108340  T
Q  200 tt 201  Q
    ||    
T  31108339 tt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 8673853 - 8673774
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttg 185  Q
    ||||||||||||||| ||||||| |||||| |||||||  |||||||  ||| ||| ||||| |||||||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttg 8673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 21260886 - 21260965
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| || ||||  ||||||||||| |||||||||| ||| ||| |||||||||||    
T  21260886 cctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcattt 21260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 21972095 - 21972189
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||  |||||| |||| |||||| || |||||||||||||||| || |||||||||||||||||||||||| | |||||  | |||||||||    
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatc-ctcagcttactaatcctcccattttgctcctgtaattactaatcattt 21972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 39402210 - 39402148
Alignment:
Q  139 tttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||| |||  |||||||||||||||||||||||| || ||| |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcattt 39402148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 25253089 - 25253186
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||||| ||||||| ||||| |||||||| ||||| || ||||  ||||||||||| ||| ||||||| || ||| |||||||||||    
T  25253089 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 25316879 - 25316976
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||||| ||||||| ||||| |||||||| ||||| || ||||  ||||||||||| ||| ||||||| || ||| |||||||||||    
T  25316879 ttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 29646699 - 29646646
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||    
T  29646699 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaa 29646646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 32242333 - 32242386
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  32242333 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 32242386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 14745469 - 14745548
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| |||||||| ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  14745469 cctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 14745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 12904840 - 12904898
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||| |||||| ||||||||||||||| |||||||| | ||||||||||||||    
T  12904840 aaaatttaataatttaaaatttcgtccctctccccacttaatcaatgtcacgtcactaa 12904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 32052610 - 32052508
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| ||||||||    
T  32052610 aaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatca 32052511  T
Q  199 ttt 201  Q
    |||    
T  32052510 ttt 32052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 34404498 - 34404560
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattt 177  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||  ||||||||||| ||||||    
T  34404498 tttcgttcctgcaaatataggtcatttgaattttcgtcactgaagttactaatccttccattt 34404560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 5993980 - 5994033
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  5993980 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 5994033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 8322495 - 8322548
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||  |||||||    
T  8322495 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatttcactaa 8322548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 25253467 - 25253370
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| | |||||||||    
T  25253467 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcattt 25253370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 25317258 - 25317161
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| | |||||||||    
T  25317258 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcattt 25317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 35512239 - 35512292
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||| |||||||    
T  35512239 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaa 35512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 39453391 - 39453444
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  39453391 ttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaa 39453444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 33735701 - 33735597
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| ||||||| |  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| ||||||    
T  33735701 aaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaat 33735602  T
Q  197 cattt 201  Q
    |||||    
T  33735601 cattt 33735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 35920521 - 35920477
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtca 236  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||    
T  35920521 ttaatcatttaaaatttcgtccctctccccacttaatcactgtca 35920477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 37945023 - 37945094
Alignment:
Q  130 tataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||| ||||| || ||||  ||||||||||| ||| ||||||| || ||| |||||||||||    
T  37945023 tataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 37945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 297320 - 297274
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 3529179 - 3529133
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  3529179 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 6758171 - 6758125
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 22024232 - 22024154
Alignment:
Q  123 ctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||| |||||||||||||| ||||| ||||| |  ||||||||||| ||| ||||||  || ||| |||||||||||    
T  22024232 ctgcaaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcattt 22024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 24547462 - 24547412
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||||||||||| ||||||||||||||| |||||||  |||| ||||||||    
T  24547462 ttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 41930607 - 41930653
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 5024355 - 5024302
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||| ||||||| |||||||| |||| ||| |||||||    
T  5024355 ttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcactaa 5024302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 10684030 - 10684083
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||| ||| || |||||||||||| ||||||| ||||||||    
T  10684030 ttaatcatttaaaattttgtcactttcctcacttaatcactgtcatgtcactaa 10684083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 11047528 - 11047581
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| || ||||||||    
T  11047528 ttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaa 11047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 14194760 - 14194719
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  14194760 ttaatcatttaaaatttcgtccctctccccacttaatcactg 14194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 18934716 - 18934813
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||||| ||||||| |||| ||||||||| ||||| ||  |||  |||||||||||  ||||||||| ||| ||| |||| ||||||    
T  18934716 ttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcattt 18934813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 19892645 - 19892592
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||  ||||| |||||||| |||| |||||||||||    
T  19892645 ttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaa 19892592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 20840624 - 20840677
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||| |||||| |||| |||||||||| |||||||| |||| |||||||||||    
T  20840624 ttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcactaa 20840677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 28269725 - 28269684
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  28269725 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 28771175 - 28771134
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  28771175 ttaatcatttaaaatttcgtccctctccccacttaatcactg 28771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 31482708 - 31482667
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactg 31482667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 38442159 - 38442200
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  38442159 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 38475336 - 38475295
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  38475336 ttaatcatttaaaatttcgtccctctccccacttaatcactg 38475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 6150545 - 6150581
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaat 228  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  6150545 ttaatcatttaaaatttcgtccctctccccacttaat 6150581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 8323056 - 8323156
Alignment:
Q  101 ggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatt 200  Q
    |||||||||| |  |||||| |||  || |||||||||||||| ||||| ||  |||  ||||||||||| |||||||||| ||| | | ||||||||||    
T  8323056 ggtttaaataggtctttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatt 8323155  T
Q  201 t 201  Q
    |    
T  8323156 t 8323156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 22533778 - 22533674
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    ||||||||||||||    |||| | ||||||| |||||||||||||| ||||| || | ||  ||||||||||| | || ||||| ||| ||| ||||||    
T  22533778 aaaaggtttaaatagctttttcgtccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaat 22533679  T
Q  197 cattt 201  Q
    |||||    
T  22533678 cattt 22533674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 23455792 - 23455673
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||    
T  23455792 aaaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatc 23455693  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | |||||||||||||    
T  23455692 atttcaaatttcgtccctct 23455673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 23454952 - 23455070
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||  ||    
T  23454952 aaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattaccca 23455051  T
Q  199 tttaagatttcgtccctct 217  Q
    ||||| ||| |||||||||    
T  23455052 tttaaaattccgtccctct 23455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 53477177 - 53477080
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  53477177 ttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 53477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 38982691 - 38982578
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaaga 205  Q
    |||||||| |||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| |||||  | ||||||||| | |    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  206 tttcgtccctctcc 219  Q
     |||||||||||||    
T  38982591 gttcgtccctctcc 38982578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 54591675 - 54591587
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaat 192  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||| || ||||||    
T  54591675 ttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaat 54591587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 54590144 - 54590243
Alignment:
Q  102 gtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||| || ||||||||||  |  ||| |||||||||||    
T  54590144 gtttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcattt 54590243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 55013198 - 55013089
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaa 190  Q
    |||||||||||| |||||||||| |||||| | || |||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||| |||||      
T  55013198 aaaaataaaaggcttaaatatgcttttcatccatgtaattataggctatttgatttttcatc-ctgagcttactaatcctcccagtttgcccctgtaatt 55013100  T
Q  191 attaatcattt 201  Q
    | |||||||||    
T  55013099 actaatcattt 55013089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 56556578 - 56556698
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||| |||||| |||| ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||||| |||||  | ||||    
T  56556578 aaaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaat 56556677  T
Q  197 catttaagatttcgtccctct 217  Q
    ||||| | | |||||||||||    
T  56556678 catttgaaagttcgtccctct 56556698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 52816526 - 52816407
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||  |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | |||||    
T  52816526 aaaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatc 52816427  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  52816426 atttgaaagttcgtccctct 52816407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 38813557 - 38813670
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | |||| |||| |    
T  38813557 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatttga 38813656  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  38813657 aagttcgtccctct 38813670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 13336935 - 13336863
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    ||||||||||||||||| ||||||| ||||||||||||||  ||||||| |||| ||||||||||||||||||    
T  13336935 ttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 38814431 - 38814311
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||| |||||| | || |||| |||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||    
T  38814431 aaaaggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 38814332  T
Q  197 catttaagatttcgtccctct 217  Q
    ||||| | | |||||||||||    
T  38814331 catttgaaagttcgtccctct 38814311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 56557422 - 56557309
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||  ||||||||| | ||||||||||||||  ||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  56557422 ttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 56557323  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  56557322 aagttcgtccctct 56557309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 52815660 - 52815779
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||| |||||| |||| ||||||||| | |||||||||| ||| |||| ||||||||||||  |||||||||| |||||  | |||||    
T  52815660 aaaggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatc 52815759  T
Q  198 atttaagatttcgtccctct 217  Q
    | || | | |||||||||||    
T  52815760 acttgaaagttcgtccctct 52815779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 22882422 - 22882352
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||| |||| |||| |||||||||||||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 22934086 - 22934016
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||||||| |||| |||| |||||||||||||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 17356256 - 17356206
Alignment:
Q  195 atcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaa 17356206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 14801827 - 14801880
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  14801827 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 14801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 34765717 - 34765664
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  34765717 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 34765664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 41583583 - 41583518
Alignment:
Q  177 ttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||||| || |||| |||||||||||| ||||||||||||| |||||||||| |||| ||||||||    
T  41583583 ttgcccctgcaaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 10781822 - 10781768
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||||| ||||||||||||||| || ||||  ||||||||||||||||    
T  10781822 attaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcactaa 10781768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16605692 - 16605746
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||||| |||||||||||| || |||||||| |||| |||||||||||    
T  16605692 attaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaa 16605746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 24349764 - 24349818
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||||| ||||||||||||||| || ||||| |||| |||||||||||    
T  24349764 attaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcactaa 24349818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 50418974 - 50418928
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||    
T  50418974 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 9254411 - 9254476
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctc 171  Q
    ||||||||||||||| ||||||| |||||| |||||||  |||||||  ||| |||||||||||||    
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctc 9254476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 35028335 - 35028282
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| |||||||||||    
T  35028335 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaa 35028282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 40387543 - 40387608
Alignment:
Q  177 ttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcac 242  Q
    |||||| || |||| |||||||||||| ||||||| ||||| |||||||||| |||| ||||||||    
T  40387543 ttgcccctgcaaaagttaatcatttaaaatttcgttcctcttctcacttaatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 52298112 - 52298169
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcacta 244  Q
    |||| |||||||||||| |||||||| |||||| |||||||| |||| ||||||||||    
T  52298112 aaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcacta 52298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 53701903 - 53701956
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||| ||||||||| |||||||| |||| |||||||||||    
T  53701903 ttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaa 53701956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 4983033 - 4982986
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    ||||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  4983033 attaatcatttaaaatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 201
Target Start/End: Complemental strand, 12691796 - 12691689
Alignment:
Q  94 aataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaatt 193  Q
    ||||||||| |||||||||  |||| | ||||||| |||||||||||||| ||||  || ||||  ||||||||||| ||| |  |||| || ||| |||    
T  12691796 aataaaagggttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatatt 12691697  T
Q  194 aatcattt 201  Q
    ||||||||    
T  12691696 aatcattt 12691689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 35731024 - 35730945
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||||| || | ||| ||| |||||||||||    
T  35731024 cctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcattt 35730945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 9145072 - 9145026
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 13058128 - 13058174
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  13058128 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 22881172 - 22881242
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    ||||||||||||||| |||| || |||||| |||||||  ||||||| |||   |||||||||||||||||    
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22881242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 22932836 - 22932906
Alignment:
Q  106 aaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatt 176  Q
    ||||||||||||||| |||| || |||||| |||||||  ||||||| |||   |||||||||||||||||    
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 23613400 - 23613446
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  23613400 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 27934623 - 27934669
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 36009150 - 36009104
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  36009150 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 42738337 - 42738291
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 43155833 - 43155787
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  43155833 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 48528552 - 48528614
Alignment:
Q  181 ccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    ||||| |||| |||||||||||| ||||||| ||| ||| |||||||| |||||||| |||||    
T  48528552 ccttgcaaaatttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcact 48528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 49879513 - 49879467
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  49879513 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 15508010 - 15507957
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| | |||||||||    
T  15508010 ttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaa 15507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 16005929 - 16005974
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcac 237  Q
    |||||||||||| |||||||||||||||  ||||||| ||||||||    
T  16005929 ttaatcatttaaaatttcgtccctctccctacttaatcactgtcac 16005974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 22249940 - 22249993
Alignment:
Q  115 tttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatc 168  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||  |||||||||    
T  22249940 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 37976490 - 37976437
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| |||||||| |||| || ||||||||    
T  37976490 ttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaa 37976437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 44967375 - 44967334
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  44967375 ttaatcatttaaaatttcgtccctctccccacttaatcactg 44967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 52909344 - 52909397
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||| ||||| |||||||| |||| || ||||||||    
T  52909344 ttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaa 52909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 24711202 - 24711238
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaat 228  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  24711202 ttaatcatttaaaatttcgtccctctccccacttaat 24711238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 48507808 - 48507732
Alignment:
Q  94 aataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcct 170  Q
    ||||||||||||||||| |  |||| | ||| ||| |||||||||||||| ||||| || ||||  |||||||||||    
T  48507808 aataaaaggtttaaataggtctttcgtccctacaaatataggtcatttgaattttcgtctctgaagttactaatcct 48507732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 48529918 - 48529862
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcact 243  Q
    |||| |||||||||||| |||| |||||||||  |||||||| |||| |||||||||    
T  48529918 aaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcact 48529862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 53559775 - 53559671
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||  |||| | ||||||| |||||| ||||||| ||||| || ||||  ||||||||| | ||| | ||||| || ||| ||||||    
T  53559775 aaaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaat 53559676  T
Q  197 cattt 201  Q
    |||||    
T  53559675 cattt 53559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 262549 - 262439
Alignment:
Q  93 aaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaat 192  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| || ||| ||    
T  262549 aaataaaaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatat 262450  T
Q  193 taatcatttaa 203  Q
    |||||||||||    
T  262449 taatcatttaa 262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 261004 - 261101
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||||| || ||| |||||||||||    
T  261004 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcattt 261101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 98 - 217
Target Start/End: Original strand, 14656477 - 14656596
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||| |||||| ||||||||||||||   |||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||    
T  14656477 aaaggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatc 14656576  T
Q  198 atttaagatttcgtccctct 217  Q
    |||| | | |||||||||||    
T  14656577 atttgaaagttcgtccctct 14656596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 4116797 - 4116915
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||||| |||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  4116797 aaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatca 4116896  T
Q  199 tttaagatttcgtccctct 217  Q
    ||| | | |||||||||||    
T  4116897 tttgaaaattcgtccctct 4116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 4117649 - 4117531
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||  |||||| |||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  4117649 aaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatca 4117550  T
Q  199 tttaagatttcgtccctct 217  Q
    ||| | | |||||||||||    
T  4117549 tttgaaaattcgtccctct 4117531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 33401236 - 33401126
Alignment:
Q  91 aaaaataaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaa 190  Q
    ||||| || ||| |||||||||| |||||| |||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  33401236 aaaaaaaataggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaa 33401137  T
Q  191 attaatcattt 201  Q
     ||||||||||    
T  33401136 gttaatcattt 33401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 17784489 - 17784385
Alignment:
Q  97 aaaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaat 196  Q
    |||||| |||||||||| |||||| |||||||| ||||| ||||||||||||||||  ||| |||||||||||||||||||||||| || ||| ||||||    
T  17784489 aaaaggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaat 17784390  T
Q  197 cattt 201  Q
    |||||    
T  17784389 cattt 17784385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 8427459 - 8427384
Alignment:
Q  107 aatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgccc 8427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 33399969 - 33400082
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatttaa 203  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||| |||||  | ||||||||| |    
T  33399969 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 33400068  T
Q  204 gatttcgtccctct 217  Q
     | |||||||||||    
T  33400069 aagttcgtccctct 33400082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 1661528 - 1661414
Alignment:
Q  103 tttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattta 202  Q
    ||||||||||  |||||| |||| ||||||||| | |||||||||||||| |||| |||||||||||| ||||||| ||| |||||  | |||||||||     
T  1661528 tttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttg 1661429  T
Q  203 agatttcgtccctct 217  Q
    | | |||||||||||    
T  1661428 aaagttcgtccctct 1661414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 14657311 - 14657193
Alignment:
Q  99 aaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||| |||||||||| |||||| |||  ||||||||| | |||||||||| ||| |||| |||||||||||| ||||||||||| |||||  | ||||||    
T  14657311 aaggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatca 14657212  T
Q  199 tttaagatttcgtccctct 217  Q
    ||| | | |||||||||||    
T  14657211 tttgaaagttcgtccctct 14657193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 8427203 - 8427297
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatca 198  Q
    |||||||||  |||||| | ||||| |||||||||||||| ||||| || || |  ||||||||||||||||||||||| || ||| ||||||||    
T  8427203 ttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatca 8427297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 3059348 - 3059401
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||||||||||||||||||| |||| || ||||||||    
T  3059348 ttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcactaa 3059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 33648807 - 33648749
Alignment:
Q  187 aaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||||| ||| |||||||    
T  33648807 aaaatttaatcacttaaaatttcttccctctcctcacttaattactgccacatcactaa 33648749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 1215223 - 1215150
Alignment:
Q  172 ccattttgcccttgtaaaaattaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    ||||||||||||   |||| ||||||| |||| ||||||||||| ||| |||||||| |||| |||||||||||    
T  1215223 ccattttgccctgtcaaaatttaatcacttaaaatttcgtccctatccccacttaatcactgccacgtcactaa 1215150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 3299940 - 3299843
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||||| ||||| | ||||||| |||||||||||||| ||||| ||  |||  ||||||||||| ||| | |||| ||| ||| |||||||||||    
T  3299940 ttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcattt 3299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 5064338 - 5064435
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | |||| || |||| ||||||||| ||||| || ||||  ||||||||||||||| ||||||| || ||| |||||||||||    
T  5064338 ttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcattt 5064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 12080727 - 12080780
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| || ||||||||    
T  12080727 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaa 12080780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 21628050 - 21627997
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||| |||||||||| |||||||| |||| |||||||||||    
T  21628050 ttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaa 21627997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 33517625 - 33517678
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||  ||||||||||    
T  33517625 ttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaa 33517678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 5064719 - 5064619
Alignment:
Q  101 ggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcatt 200  Q
    ||||||||||||  |||| |  |||||| |||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||||| || ||| ||||||||||    
T  5064719 ggtttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatt 5064620  T
Q  201 t 201  Q
    |    
T  5064619 t 5064619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 15819877 - 15819774
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatc 197  Q
    ||||| |||||||||  |||| | ||||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | | |||||| ||| | |||||    
T  15819877 aaaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatc 15819778  T
Q  198 attt 201  Q
    ||||    
T  15819777 attt 15819774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 28000691 - 28000645
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 30337540 - 30337586
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 13480211 - 13480308
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||| ||||||| ||||| || ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  13480211 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 13480308  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 23291747 - 23291844
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||| ||| |||||| ||||||| |||||||| ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  23291747 ttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 23291844  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 30234973 - 30234876
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||  |||| | ||||||| |||||||  ||||| |||||||| ||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  30234973 ttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 30234876  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 30725850 - 30725903
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| || ||||| |||| || ||||||||    
T  30725850 ttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaa 30725903  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 30803952 - 30803993
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactg 233  Q
    |||||||||||| ||||||||||||||| |||||||| ||||    
T  30803952 ttaatcatttaaaatttcgtccctctccccacttaatcactg 30803993  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 33647054 - 33647107
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| |||||||| |||||| || ||||| |||| |||||||||||    
T  33647054 ttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaa 33647107  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 32337931 - 32337851
Alignment:
Q  121 tcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||| |||||||||||||| ||||| || ||||  ||||| ||||| ||| | ||||| || ||| |||||||||||    
T  32337931 tcctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcattt 32337851  T

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Target: scaffold1493 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 596 - 693
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| || ||| |||||||||||    
T  596 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcattt 693  T

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Target: scaffold0018 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 73112 - 73209
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    |||||||||| |||||| |||| |||||| || ||||||| |||||||| ||||||||||||||||||||||||||||| |||||  | |||||||||    
T  73112 ttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcattt 73209  T

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Target: scaffold0176 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 516
Target Start/End: Complemental strand, 16903 - 16831
Alignment:
Q  444 ttgttgaagaggaatctgtgaaagaggttctatttgaaaaagaaacaccaatttttaaaccccaacaagttcc 516  Q
    |||||| |||||||||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||||    
T  16903 ttgttgcagaggaatctgtgaaagaagttctatttgacatagaaacaccaattttcaaaccccaacaagttcc 16831  T

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Target: scaffold0182 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 14474 - 14400
Alignment:
Q  104 ttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccatttt 178  Q
    |||||||||| |||||  |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14474 ttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttt 14400  T

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Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 13131 - 13215
Alignment:
Q  98 aaaggtttaaatatgcatttcattcctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgccc 182  Q
    ||||| |||||||||| |||||| |||| || |||||  |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  13131 aaaggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgccc 13215  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 69056 - 69109
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  69056 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 69109  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 37900 - 37847
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacgtcactaa 245  Q
    |||||||||||| ||||||||||||||| |||||||| |||| |||||||||||    
T  37900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 37847  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 10874 - 10953
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| |||||||||||||| ||||| ||   ||  ||||||||||| |||||||||| ||| ||| |||||||||||    
T  10874 cctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcattt 10953  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 10346 - 10425
Alignment:
Q  122 cctgcaattataggtcatttgatttttcatcactgagcttactaatcctcccattttgcccttgtaaaaattaatcattt 201  Q
    ||||||| ||||| |||||||| ||||| || ||||  ||||||||||| ||| ||||||| || ||| |||||||||||    
T  10346 cctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 10425  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 139762 - 139809
Alignment:
Q  191 attaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    ||||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  139762 attaatcatttaaaatttcgtccctctccccacttaatcactgccacg 139809  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 1324 - 1370
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 141900 - 141854
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 1860 - 1906
Alignment:
Q  192 ttaatcatttaagatttcgtccctctcctcacttaattactgtcacg 238  Q
    |||||||||||| ||||||||||||||| |||||||| |||| ||||    
T  1860 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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