View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18559_low_8 (Length: 526)

Name: NF18559_low_8
Description: NF18559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18559_low_8
NF18559_low_8
[»] chr5 (44 HSPs)
chr5 (12-526)||(35922622-35923140)
chr5 (204-434)||(22169439-22169668)
chr5 (238-424)||(13312590-13312776)
chr5 (206-434)||(42034740-42034967)
chr5 (205-428)||(33958878-33959101)
chr5 (286-432)||(43461680-43461826)
chr5 (195-362)||(15221618-15221786)
chr5 (250-434)||(38521912-38522094)
chr5 (248-381)||(19621414-19621547)
chr5 (227-406)||(31189588-31189762)
chr5 (368-434)||(36169394-36169460)
chr5 (221-330)||(43262781-43262890)
chr5 (450-526)||(43262819-43262895)
chr5 (450-520)||(15221688-15221758)
chr5 (325-391)||(30045873-30045939)
chr5 (326-403)||(7156105-7156182)
chr5 (450-515)||(19621591-19621656)
chr5 (204-312)||(36169302-36169410)
chr5 (450-526)||(36169315-36169391)
chr5 (329-392)||(43262708-43262771)
chr5 (208-318)||(43461794-43461904)
chr5 (326-376)||(30704398-30704448)
chr5 (221-298)||(35922627-35922704)
chr5 (457-520)||(42034887-42034950)
chr5 (287-368)||(2477302-2477383)
chr5 (227-320)||(19621563-19621656)
chr5 (452-521)||(35922858-35922927)
chr5 (450-521)||(22169581-22169651)
chr5 (450-504)||(13312722-13312776)
chr5 (450-504)||(31189512-31189566)
chr5 (463-515)||(31189710-31189762)
chr5 (463-506)||(33958909-33958952)
chr5 (213-318)||(38522060-38522164)
chr5 (221-318)||(22169376-22169473)
chr5 (466-526)||(16095527-16095587)
chr5 (222-321)||(7156000-7156099)
chr5 (450-497)||(36169452-36169499)
chr5 (400-434)||(13312696-13312730)
chr5 (451-489)||(15221587-15221625)
chr5 (463-520)||(7156000-7156057)
chr5 (463-504)||(30704321-30704362)
chr5 (221-262)||(30704505-30704546)
chr5 (215-290)||(15221548-15221624)
chr5 (450-526)||(22169371-22169447)
[»] chr1 (56 HSPs)
chr1 (204-424)||(29676982-29677202)
chr1 (206-429)||(34490175-34490399)
chr1 (248-429)||(29167752-29167931)
chr1 (205-425)||(38951896-38952119)
chr1 (222-417)||(5831531-5831726)
chr1 (240-434)||(42604200-42604394)
chr1 (239-426)||(25238467-25238653)
chr1 (220-364)||(2569960-2570103)
chr1 (222-424)||(34364224-34364424)
chr1 (327-424)||(517433-517530)
chr1 (253-354)||(9929677-9929778)
chr1 (452-520)||(5831658-5831726)
chr1 (327-403)||(2996025-2996101)
chr1 (450-526)||(34490312-34490388)
chr1 (209-323)||(13350889-13351004)
chr1 (450-504)||(5855228-5855282)
chr1 (455-521)||(13350902-13350968)
chr1 (450-520)||(13351009-13351079)
chr1 (450-520)||(29677001-29677071)
chr1 (326-434)||(9468091-9468199)
chr1 (238-323)||(9929865-9929950)
chr1 (450-526)||(5855021-5855096)
chr1 (204-290)||(13351011-13351098)
chr1 (452-505)||(38952033-38952086)
chr1 (208-330)||(5855012-5855134)
chr1 (204-318)||(5855202-5855317)
chr1 (478-521)||(34941719-34941762)
chr1 (450-503)||(25238600-25238653)
chr1 (465-526)||(34364369-34364430)
chr1 (254-323)||(38244794-38244863)
chr1 (458-504)||(517539-517585)
chr1 (212-318)||(5831442-5831548)
chr1 (269-323)||(24708074-24708128)
chr1 (450-492)||(29167754-29167796)
chr1 (463-521)||(29677206-29677264)
chr1 (205-318)||(34490091-34490204)
chr1 (199-264)||(34941696-34941762)
chr1 (450-523)||(2995919-2995991)
chr1 (455-520)||(5831452-5831517)
chr1 (452-485)||(9468064-9468097)
chr1 (463-520)||(28499663-28499720)
chr1 (267-323)||(17227498-17227554)
chr1 (452-504)||(34364169-34364221)
chr1 (454-526)||(34490103-34490175)
chr1 (402-434)||(38244801-38244833)
chr1 (208-279)||(42604114-42604186)
chr1 (257-304)||(9468064-9468111)
chr1 (238-297)||(34364169-34364228)
chr1 (224-330)||(2995924-2996029)
chr1 (450-504)||(9929662-9929716)
chr1 (400-434)||(9929870-9929904)
chr1 (450-492)||(9929896-9929938)
chr1 (221-279)||(29677206-29677264)
chr1 (247-284)||(29168548-29168585)
chr1 (450-514)||(2996125-2996189)
chr1 (461-521)||(42604128-42604188)
[»] chr8 (47 HSPs)
chr8 (204-434)||(38606724-38606955)
chr8 (247-434)||(5321901-5322089)
chr8 (238-431)||(15714626-15714819)
chr8 (205-434)||(5573762-5573992)
chr8 (221-434)||(26493251-26493463)
chr8 (281-432)||(1251451-1251601)
chr8 (307-432)||(1240901-1241025)
chr8 (328-431)||(29367076-29367179)
chr8 (226-432)||(24575827-24576023)
chr8 (300-430)||(31273555-31273685)
chr8 (264-434)||(31596777-31596947)
chr8 (341-434)||(32959542-32959635)
chr8 (212-318)||(31596704-31596811)
chr8 (253-429)||(6809782-6809959)
chr8 (370-434)||(33286199-33286263)
chr8 (452-507)||(38606756-38606811)
chr8 (451-519)||(24576180-24576248)
chr8 (450-526)||(31596709-31596785)
chr8 (212-318)||(1251569-1251676)
chr8 (450-517)||(5322081-5322148)
chr8 (326-403)||(15233241-15233318)
chr8 (307-404)||(24537982-24538078)
chr8 (225-298)||(5322075-5322148)
chr8 (463-520)||(15233138-15233195)
chr8 (463-520)||(28700060-28700117)
chr8 (228-364)||(26914613-26914748)
chr8 (450-521)||(1251595-1251666)
chr8 (223-290)||(24576181-24576248)
chr8 (264-323)||(24919866-24919925)
chr8 (208-330)||(28700045-28700166)
chr8 (212-318)||(38606921-38607028)
chr8 (450-521)||(38606947-38607018)
chr8 (267-321)||(40502172-40502226)
chr8 (450-507)||(15233341-15233398)
chr8 (450-494)||(6809920-6809964)
chr8 (450-514)||(26914613-26914677)
chr8 (450-526)||(33286131-33286207)
chr8 (267-323)||(40502382-40502438)
chr8 (400-434)||(5321939-5321973)
chr8 (454-516)||(5573704-5573766)
chr8 (222-320)||(15233138-15233235)
chr8 (450-504)||(15714626-15714680)
chr8 (221-319)||(29367147-29367244)
chr8 (326-383)||(28700183-28700240)
chr8 (221-314)||(33286136-33286229)
chr8 (267-323)||(24919442-24919498)
chr8 (267-323)||(24920078-24920134)
[»] chr2 (26 HSPs)
chr2 (204-434)||(1400670-1400900)
chr2 (204-430)||(28527220-28527445)
chr2 (204-434)||(30905947-30906178)
chr2 (259-434)||(43900510-43900685)
chr2 (221-403)||(33667328-33667510)
chr2 (221-433)||(45305950-45306160)
chr2 (293-434)||(7378456-7378594)
chr2 (450-526)||(1400683-1400759)
chr2 (451-520)||(30906171-30906240)
chr2 (450-526)||(41212430-41212506)
chr2 (450-514)||(28527244-28527308)
chr2 (450-526)||(30905960-30906036)
chr2 (222-318)||(30906144-30906240)
chr2 (221-299)||(41212423-41212501)
chr2 (450-526)||(33667439-33667515)
chr2 (221-313)||(45305886-45305978)
chr2 (455-520)||(34175064-34175129)
chr2 (450-526)||(33667252-33667328)
chr2 (251-305)||(7378573-7378627)
chr2 (326-380)||(34175155-34175209)
chr2 (452-526)||(45305881-45305955)
chr2 (452-520)||(7378588-7378656)
chr2 (400-434)||(1400751-1400785)
chr2 (400-434)||(28527300-28527334)
chr2 (450-520)||(43900448-43900518)
chr2 (253-318)||(43900479-43900544)
[»] chr3 (72 HSPs)
chr3 (205-435)||(19280179-19280409)
chr3 (220-431)||(22432315-22432526)
chr3 (203-433)||(42637854-42638082)
chr3 (204-434)||(3823633-3823864)
chr3 (232-416)||(4169033-4169214)
chr3 (204-429)||(31545603-31545829)
chr3 (251-434)||(3785944-3786126)
chr3 (230-423)||(1705593-1705786)
chr3 (204-434)||(5341858-5342089)
chr3 (238-410)||(26308571-26308743)
chr3 (248-434)||(44080238-44080424)
chr3 (204-377)||(11501309-11501483)
chr3 (204-416)||(42481300-42481511)
chr3 (199-436)||(19624286-19624523)
chr3 (316-424)||(13358101-13358208)
chr3 (222-379)||(39126201-39126359)
chr3 (252-430)||(27707660-27707837)
chr3 (205-403)||(27335291-27335479)
chr3 (253-429)||(34627245-34627422)
chr3 (311-433)||(9710728-9710849)
chr3 (350-434)||(11509885-11509969)
chr3 (221-318)||(3785881-3785978)
chr3 (221-318)||(3823570-3823667)
chr3 (450-526)||(3823565-3823641)
chr3 (463-521)||(9710850-9710908)
chr3 (253-326)||(27079380-27079453)
chr3 (253-326)||(27085177-27085250)
chr3 (450-526)||(3785876-3785952)
chr3 (450-520)||(18733598-18733668)
chr3 (450-520)||(27335309-27335379)
chr3 (450-520)||(31545740-31545810)
chr3 (221-318)||(44080175-44080273)
chr3 (450-519)||(5342000-5342069)
chr3 (204-361)||(11509989-11510148)
chr3 (326-403)||(27365008-27365085)
chr3 (452-521)||(44080175-44080244)
chr3 (450-526)||(11509817-11509893)
chr3 (454-526)||(19280325-19280397)
chr3 (355-431)||(41571828-41571904)
chr3 (455-526)||(1705792-1705863)
chr3 (221-279)||(9710850-9710908)
chr3 (450-504)||(26308571-26308625)
chr3 (450-507)||(11501241-11501298)
chr3 (348-425)||(23163321-23163397)
chr3 (450-515)||(26308759-26308824)
chr3 (326-403)||(27326047-27326124)
chr3 (326-403)||(27332284-27332361)
chr3 (454-526)||(22432458-22432530)
chr3 (312-391)||(27079301-27079380)
chr3 (312-391)||(27085098-27085177)
chr3 (454-520)||(39126293-39126359)
chr3 (453-526)||(42637868-42637939)
chr3 (453-526)||(11501397-11501470)
chr3 (450-518)||(27040706-27040774)
chr3 (267-323)||(34164324-34164380)
chr3 (451-526)||(3823776-3823851)
chr3 (450-489)||(27079414-27079453)
chr3 (450-489)||(27085211-27085250)
chr3 (453-496)||(33488363-33488406)
chr3 (221-318)||(1705763-1705858)
chr3 (451-497)||(3786086-3786132)
chr3 (326-364)||(18733538-18733576)
chr3 (197-318)||(18733573-18733694)
chr3 (221-314)||(19280119-19280210)
chr3 (455-512)||(1705593-1705650)
chr3 (452-521)||(11510062-11510130)
chr3 (450-526)||(19280114-19280188)
chr3 (460-521)||(19624440-19624500)
chr3 (253-318)||(42638049-42638114)
chr3 (237-297)||(11501243-11501303)
chr3 (455-507)||(13359005-13359057)
chr3 (468-520)||(31545446-31545498)
[»] chr6 (59 HSPs)
chr6 (237-434)||(10304631-10304827)
chr6 (253-434)||(33814961-33815143)
chr6 (209-424)||(22608352-22608571)
chr6 (238-434)||(3222413-3222610)
chr6 (252-412)||(138661-138820)
chr6 (252-412)||(146682-146841)
chr6 (204-411)||(9068411-9068621)
chr6 (204-404)||(2834974-2835175)
chr6 (208-364)||(2430507-2430664)
chr6 (207-423)||(3620659-3620876)
chr6 (221-434)||(23595136-23595336)
chr6 (450-526)||(20084590-20084666)
chr6 (450-526)||(24386335-24386411)
chr6 (450-520)||(9068529-9068599)
chr6 (454-521)||(22608280-22608347)
chr6 (204-332)||(30056022-30056152)
chr6 (450-507)||(10304629-10304686)
chr6 (221-318)||(22608280-22608376)
chr6 (450-526)||(11108079-11108155)
chr6 (222-318)||(23595074-23595170)
chr6 (455-520)||(7915617-7915683)
chr6 (327-431)||(9474622-9474718)
chr6 (221-318)||(3222351-3222447)
chr6 (207-323)||(7915687-7915803)
chr6 (450-526)||(3222346-3222421)
chr6 (452-520)||(23595074-23595142)
chr6 (452-526)||(2430516-2430591)
chr6 (450-521)||(7915717-7915788)
chr6 (450-521)||(23595265-23595336)
chr6 (450-520)||(7706779-7706849)
chr6 (286-364)||(7706862-7706940)
chr6 (221-323)||(24386304-24386406)
chr6 (450-520)||(30056041-30056111)
chr6 (450-518)||(3222556-3222624)
chr6 (454-518)||(13767125-13767189)
chr6 (450-521)||(2835086-2835157)
chr6 (451-517)||(138813-138878)
chr6 (451-517)||(146834-146899)
chr6 (262-320)||(2430648-2430706)
chr6 (400-434)||(2430650-2430684)
chr6 (204-305)||(7706943-7707042)
chr6 (221-323)||(20084595-20084697)
chr6 (205-297)||(11108067-11108160)
chr6 (386-434)||(11108155-11108203)
chr6 (450-526)||(11108195-11108271)
chr6 (267-323)||(15341853-15341909)
chr6 (267-323)||(19846091-19846147)
chr6 (468-520)||(22608505-22608557)
chr6 (450-485)||(2365669-2365704)
chr6 (454-521)||(3620674-3620741)
chr6 (224-283)||(13767125-13767184)
chr6 (268-323)||(15341430-15341485)
chr6 (400-434)||(9068503-9068537)
chr6 (269-323)||(14524093-14524147)
chr6 (253-318)||(10304793-10304858)
chr6 (253-318)||(33815109-33815174)
chr6 (406-434)||(2365649-2365677)
chr6 (267-323)||(15341641-15341697)
chr6 (267-323)||(15342065-15342121)
[»] scaffold1126 (4 HSPs)
scaffold1126 (204-430)||(104-332)
scaffold1126 (450-526)||(328-404)
scaffold1126 (221-318)||(302-399)
scaffold1126 (450-520)||(123-194)
[»] chr7 (45 HSPs)
chr7 (204-434)||(20556748-20556982)
chr7 (205-434)||(5083690-5083918)
chr7 (252-434)||(31303435-31303616)
chr7 (221-434)||(21589605-21589818)
chr7 (204-433)||(4290810-4291039)
chr7 (204-434)||(18312809-18313039)
chr7 (252-434)||(21548434-21548616)
chr7 (204-412)||(28804883-28805094)
chr7 (292-425)||(22740644-22740776)
chr7 (242-434)||(15958248-15958441)
chr7 (204-403)||(32964775-32964964)
chr7 (450-526)||(28805142-28805218)
chr7 (220-320)||(22033156-22033255)
chr7 (221-321)||(28805113-28805213)
chr7 (450-526)||(31303367-31303443)
chr7 (450-526)||(21589747-21589823)
chr7 (326-403)||(46943761-46943839)
chr7 (450-521)||(22032980-22033050)
chr7 (452-521)||(22033186-22033254)
chr7 (221-318)||(31303372-31303469)
chr7 (450-526)||(22740070-22740146)
chr7 (204-298)||(22740057-22740152)
chr7 (286-372)||(5174910-5174996)
chr7 (456-526)||(18312956-18313026)
chr7 (450-520)||(31303576-31303646)
chr7 (221-318)||(20556685-20556782)
chr7 (263-403)||(27523442-27523583)
chr7 (452-526)||(20556680-20556754)
chr7 (450-520)||(32964875-32964945)
chr7 (450-507)||(5083721-5083778)
chr7 (450-502)||(15958433-15958485)
chr7 (450-526)||(28804896-28804972)
chr7 (450-520)||(5083910-5083980)
chr7 (450-500)||(15958248-15958298)
chr7 (240-310)||(15958416-15958485)
chr7 (452-521)||(32964672-32964741)
chr7 (457-521)||(5174814-5174878)
chr7 (450-526)||(18312741-18312817)
chr7 (450-506)||(20556893-20556949)
chr7 (368-410)||(2887188-2887230)
chr7 (455-521)||(21548581-21548646)
chr7 (451-520)||(4290951-4291020)
chr7 (452-505)||(21548388-21548440)
chr7 (221-298)||(22032980-22033056)
chr7 (222-318)||(5083884-5083980)
[»] chr4 (52 HSPs)
chr4 (204-434)||(1966731-1966960)
chr4 (220-434)||(9809056-9809272)
chr4 (222-434)||(17633257-17633468)
chr4 (300-434)||(16583578-16583712)
chr4 (205-423)||(14351055-14351274)
chr4 (220-431)||(9810745-9810959)
chr4 (204-425)||(19596773-19596996)
chr4 (238-424)||(42908560-42908745)
chr4 (204-425)||(8740690-8740908)
chr4 (307-423)||(33249616-33249732)
chr4 (226-434)||(24669155-24669363)
chr4 (274-434)||(35544388-35544546)
chr4 (286-434)||(2433694-2433842)
chr4 (307-423)||(33179759-33179875)
chr4 (221-313)||(17633439-17633531)
chr4 (325-434)||(55666844-55666951)
chr4 (450-521)||(17633460-17633531)
chr4 (450-516)||(24669297-24669363)
chr4 (450-504)||(42908691-42908745)
chr4 (450-526)||(16583510-16583586)
chr4 (450-521)||(19596907-19596978)
chr4 (450-520)||(17633257-17633327)
chr4 (221-318)||(9808993-9809090)
chr4 (369-434)||(20874815-20874880)
chr4 (450-526)||(1966744-1966819)
chr4 (387-425)||(1966978-1967016)
chr4 (450-520)||(19596700-19596770)
chr4 (450-520)||(19746941-19747011)
chr4 (450-520)||(19792795-19792865)
chr4 (221-318)||(9810679-9810776)
chr4 (221-318)||(16583515-16583612)
chr4 (221-318)||(55666918-55667014)
chr4 (212-318)||(8740883-8740991)
chr4 (253-323)||(24669123-24669194)
chr4 (399-434)||(24669270-24669305)
chr4 (450-521)||(55666943-55667014)
chr4 (452-518)||(8740912-8740978)
chr4 (452-526)||(14351188-14351262)
chr4 (214-298)||(19596691-19596776)
chr4 (450-526)||(9808988-9809064)
chr4 (450-526)||(9810674-9810750)
chr4 (450-513)||(24669099-24669163)
chr4 (454-526)||(25007625-25007696)
chr4 (246-318)||(35544512-35544584)
chr4 (450-490)||(35544538-35544578)
chr4 (450-521)||(9810887-9810958)
chr4 (457-496)||(20871788-20871827)
chr4 (451-490)||(33179726-33179765)
chr4 (450-507)||(8740625-8740682)
chr4 (450-507)||(8740717-8740774)
chr4 (222-283)||(19746950-19747011)
chr4 (222-283)||(19792795-19792856)
[»] scaffold0123 (2 HSPs)
scaffold0123 (307-434)||(24021-24147)
scaffold0123 (238-318)||(24113-24195)
[»] scaffold0251 (3 HSPs)
scaffold0251 (309-426)||(10617-10734)
scaffold0251 (208-318)||(10708-10819)
scaffold0251 (463-521)||(10747-10805)
[»] scaffold0043 (1 HSPs)
scaffold0043 (326-403)||(87035-87112)
[»] scaffold0024 (1 HSPs)
scaffold0024 (326-403)||(112158-112235)
[»] scaffold0126 (4 HSPs)
scaffold0126 (376-434)||(21549-21607)
scaffold0126 (210-334)||(21420-21545)
scaffold0126 (253-316)||(21575-21638)
scaffold0126 (457-520)||(21433-21496)
[»] scaffold0213 (1 HSPs)
scaffold0213 (253-330)||(25338-25415)
[»] scaffold0291 (1 HSPs)
scaffold0291 (326-403)||(5870-5947)
[»] scaffold0016 (1 HSPs)
scaffold0016 (455-500)||(49447-49492)
[»] scaffold0012 (1 HSPs)
scaffold0012 (267-323)||(142063-142119)


Alignment Details
Target: chr5 (Bit Score: 434; Significance: 0; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 12 - 526
Target Start/End: Complemental strand, 35923140 - 35922622
Alignment:
Q  12 aacctgtgcagtgttaaacatttgaatttgcagcaaaatgactttgttcttatgtacatgttggctatctatctatttat----attatagtagcttgaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||    
T  35923140 aacctgtgcagtgttaaacatttgaatttgcagcaaaatgactttgttcttatgtacatgttggctatctatctatctatctatattatagtagcttgaa 35923041  T
Q  108 gttcactatggttgatttatgctttttgtttgttgttgaagtaaagtgcttgaaagcattactttgacctaaataagtgaaagaaacaaaatacaccaat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35923040 gttcactatggttgatttatgctttttgtttgttgttgaagtaaagtgcttgaaagcattactttgacctaaataagtgaaagaaaaaaaatacaccaat 35922941  T
Q  208 gataggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35922940 gataggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttaagttaaccaaatttatggtctgtgggaccatattttttaagttgcat 35922841  T
Q  308 gaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtg 407  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||||||||||||||||||||||    
T  35922840 gaccactattttttcagaatttatttggttaactaaatggaaaaatagtggtcatacgcattttagttgcgtgaccacatttttcagcttctaaatagtg 35922741  T
Q  408 gtcacgcaactgaaaaaatgtggtcactttgtttnnnnnnnntgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    ||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35922740 gtcacgcaactgaaaaaatgtggccactttgttcaaaaaaaatgtggtcacacataccatatatttgattaactgaaatttttcagagtgatacaaaggg 35922641  T
Q  508 atgtacacattaagtgtgt 526  Q
    |||||||||||||||||||    
T  35922640 atgtacacattaagtgtgt 35922622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 204 - 434
Target Start/End: Complemental strand, 22169668 - 22169439
Alignment:
Q  204 caatgataggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    |||||||||||  ||| |||||| |||||||| ||||||| |||| |||||| ||| ||||||||||||||||| | |||| ||||| ||||||| ||||    
T  22169668 caatgataggtgcacaccttaatctgtacacc-ctttgtaccactctgaaaatttttagttaaccaaatttatgatatgtgtgaccacatttttttagtt 22169570  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    || |||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| || |||||||| ||| |||||    
T  22169569 gcgtgaccattattttttcaaaatttatttggttaactacgttgaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcaacttataaat 22169470  T
Q  404 agtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||||||| ||||    
T  22169469 agtggtcacgcaactgaaaaaatgtgatcac 22169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 238 - 424
Target Start/End: Complemental strand, 13312776 - 13312590
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggtt 337  Q
    |||||| |||| |||||||||||||||||||| || |||| | |||| ||||| ||||||| |||||| |||||||||||||| || |||||||||||||    
T  13312776 tttgtaccactctgaaaaatttcagttaaccatatatatgatttgtgtgaccacatttttttagttgcgtgaccactatttttccataatttatttggtt 13312677  T
Q  338 aactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaa 424  Q
    |||||| |||||||||||| | |||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||||    
T  13312676 aactaagtggaaaaatagttgccacgcgcattttagttgcgtgaccacatttttcagcttctaaatagcggtcacccaactgaaaaa 13312590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 206 - 434
Target Start/End: Complemental strand, 42034967 - 42034740
Alignment:
Q  206 atgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttg 304  Q
    |||||||||||||||||| |||| ||||| | ||||||| |||| | ||||||||||||| | ||||| |||||| ||||  | || ||||||| |||||    
T  42034967 atgataggtagacatctttaatgcgtacatccctttgtaccactctaaaaaatttcagttgatcaaatatatggtatgtgtaatcacatttttttagttg 42034868  T
Q  305 catgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaata 404  Q
    | ||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||    
T  42034867 cgtgaccactagttttccaaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttgcgtgaccacatttttcagcttct-aata 42034769  T
Q  405 gtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |  |||||||||||| ||||||||||||||    
T  42034768 ggagtcacgcaactg-aaaaatgtggtcac 42034740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 205 - 428
Target Start/End: Original strand, 33958878 - 33959101
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||||||| | ||||| |||| | | ||||||| |||| |||||||||||| |||||||||| |||||||| ||  | || ||||||| || |    
T  33958878 aatgataggtagacacccttaatatgtatatc-ctttgtaccactctgaaaaatttcacttaaccaaatatatggtctatgtaatcacatttttttagct 33958976  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||| |||||| || |||||||||||| |||||| ||||||||||||||| || || ||||||||||||||| |||||||||||| ||||||||    
T  33958977 gcatgaccacaatttttccagaatttatttggtcaactaagtggaaaaatagtggttactcggattttagttgcgtgaccatatttttcagtttctaaat 33959076  T
Q  404 agtggtcacgcaactgaaaaaatgt 428  Q
    |||||||||||| ||||||||||||    
T  33959077 agtggtcacgcagctgaaaaaatgt 33959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 286 - 432
Target Start/End: Original strand, 43461680 - 43461826
Alignment:
Q  286 gaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcat 385  Q
    ||||||| ||||| |||||  |||| |||||||||||| ||||||||||||| ||||| ||||||||||||||| ||| | ||||||||||||||| | |    
T  43461680 gaccatactttttcagttgtgtgacaactattttttcagaatttatttggtttactaagtggaaaaatagtggttacgtgaattttagttgcgtgaccgt 43461779  T
Q  386 atttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtc 432  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||||    
T  43461780 atttttcaacttctaaatagtggtcacacaactgaaaaaatatggtc 43461826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 195 - 362
Target Start/End: Complemental strand, 15221786 - 15221618
Alignment:
Q  195 aaaatacaccaatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatat 293  Q
    |||||| |||||||||||| ||||| ||| |||||||||||  |||||||||| | |||||||||||||||||| |||| ||||||||||| ||||| ||    
T  15221786 aaaatagaccaatgataggcagacacctttaatgtgtacactcctttgtatcattctgaaaaatttcagttaactaaatatatggtctgtgtgaccacat 15221687  T
Q  294 tttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcac 362  Q
    ||||| | |||  ||||||||||||||||| ||||||||| ||||| ||| |||||||| |||||||||    
T  15221686 ttttttaattgtgtgaccactattttttcagaatttatttagttaattaagtggaaaaagagtggtcac 15221618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 250 - 434
Target Start/End: Original strand, 38521912 - 38522094
Alignment:
Q  250 tgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaa 349  Q
    ||||||||||| |||||| |  | |||| |||||| ||| | |||||||| ||||| |||||| || ||||  | ||||||||| ||||||||| || ||    
T  38521912 tgaaaaatttcggttaactacgtatatgatctgtgtgactacatttttta-gttgcgtgaccattagttttctagaatttatttagttaactaagtgtaa 38522010  T
Q  350 aaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  38522011 aaatagtggtcacgcgcatttta-tcgcgtgaccacatttttcagcttctaaatagtggtcatgcaattgaaaaaatgtggtcac 38522094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 381
Target Start/End: Original strand, 19621414 - 19621547
Alignment:
Q  248 tttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatgg 347  Q
    |||| ||||||| | |||||||||| ||| ||| |||  |||| ||||||  |||||| | | |||||||||| || ||||||||||||||||||| |||    
T  19621414 tttggaaaatttaacttaaccaaatatattgtcagtgtaaccacatttttgtagttgcgtaatcactatttttccagaatttatttggttaactaagtgg 19621513  T
Q  348 aaaaatagtggtcacgcgcattttagttgcgtga 381  Q
    ||||||||||||||||| ||||||||||||||||    
T  19621514 aaaaatagtggtcacgcacattttagttgcgtga 19621547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 406
Target Start/End: Complemental strand, 31189762 - 31189588
Alignment:
Q  227 gtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccata-ttttttaagttgcatgaccactattttttcaaa 325  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||      ||||| | |||||| |||||  | || ||||| ||| || |    
T  31189762 gtgtacacccctttgtaccactttaaaaaatttcagttaaccaaatatatggtt-----gaccacaatttttttagttgtgtaactactatgtttccaga 31189668  T
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagt 406  Q
    ||||||||| ||||| || ||||||| ||||||||||   ||||||||||||||||||| |||||||||||||||||||||    
T  31189667 atttatttgattaaccaagtggaaaa-tagtggtcacaaacattttagttgcgtgatcacatttttcagcttctaaatagt 31189588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 434
Target Start/End: Original strand, 36169394 - 36169460
Alignment:
Q  368 ttttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36169394 ttttagttgcgtgaccatatttttcagcttctaaatagtggtcacgcaactgaaagaatgtggtcac 36169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 221 - 330
Target Start/End: Complemental strand, 43262890 - 43262781
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||| ||||| |||| || ||||   |||| |||||||||    
T  43262890 cttaatgtgtacacccctttgtactactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacatttgtttagttatgtgactactattttt 43262791  T
Q  321 tcaaaattta 330  Q
     ||| |||||    
T  43262790 ccaacattta 43262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 43262819 - 43262895
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||| ||||    
T  43262819 tgtggtcacacagaccatatatttggttaactgaaatttttcaaagtagtacaaaggggtgtacacattaagggtgt 43262895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 15221688 - 15221758
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||  ||||||||||||    
T  15221688 tgtggtcacacagaccatatatttagttaactgaaatttttcagaatgatacaaaggagtgtacacattaa 15221758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 30045939 - 30045873
Alignment:
Q  325 aatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatattttt 391  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  30045939 aatttatttggttaattaaatggaaaaatagtggtcacgcgtattttagttgcgtcattatattttt 30045873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 7156182 - 7156105
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||| ||| |||||||||| |||||||||  |||||||||||| ||||| ||||||||||||||||||    
T  7156182 atttatttggttaattaagtggaaaaataatggtcacgcatattttagttgcgcgatcacatttttcagcttctaaat 7156105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 450 - 515
Target Start/End: Original strand, 19621591 - 19621656
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacac 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||    
T  19621591 tgtggtcacacataccatatatttggttaactgaaatttttcagaatggtacaaaggagtgtacac 19621656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 36169302 - 36169410
Alignment:
Q  204 caatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| |||||||||||||  | ||||||| ||||||||||||||| |||||||||||| ||||||  ||| ||||| ||||||| |||    
T  36169302 caatgataggtagacactcttaatgtgtacttctctttgtaccactttgaaaaattttagttaaccaaatatatggtaggtgtgaccacatttttt-agt 36169400  T
Q  303 tgcatgacca 312  Q
    ||| ||||||    
T  36169401 tgcgtgacca 36169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 36169391 - 36169315
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||| ||||    
T  36169391 tgtggtcacacctaccatatatttggttaactaaaatttttcaaagtggtacaaagagaagtacacattaagagtgt 36169315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 392
Target Start/End: Original strand, 43262708 - 43262771
Alignment:
Q  329 tatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttc 392  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||    
T  43262708 tatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgtgtgaccacatttttc 43262771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 43461904 - 43461794
Alignment:
Q  208 gataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgca 306  Q
    |||||||||||| |||||||||||  ||| ||||||| ||||||  |||||||||||||| ||||| |||||||| | |||||||||||||| |||||      
T  43461904 gataggtagacactcttaatgtgtgtacccctttgtagcacttttgaaaatttcagttaatcaaatatatggtct-ttggaccatattttttcagttgtg 43461806  T
Q  307 tgaccactattt 318  Q
    ||||||||||||    
T  43461805 tgaccactattt 43461794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 326 - 376
Target Start/End: Original strand, 30704398 - 30704448
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttg 376  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30704398 atttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttg 30704448  T

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Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 35922627 - 35922704
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt 298  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||| ||||| |||||| |||| ||||| |||||||    
T  35922627 cttaatgtgtacatccctttgtatcactctgaaaaatttcagttaatcaaatatatggtatgtgtgaccacatttttt 35922704  T

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Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 457 - 520
Target Start/End: Original strand, 42034887 - 42034950
Alignment:
Q  457 acacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||| ||||||    
T  42034887 acacataccatatatttgatcaactgaaattttttagagtggtacaaagggatgtacgcattaa 42034950  T

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Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 368
Target Start/End: Complemental strand, 2477383 - 2477302
Alignment:
Q  287 accatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcat 368  Q
    |||| |||| || |||||| || ||||||||||| || ||||||||||||||||||| | |||||||||||| |||||||||    
T  2477383 accacatttatttagttgcgtggccactatttttacagaatttatttggttaactaagtcgaaaaatagtggccacgcgcat 2477302  T

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Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 19621656 - 19621563
Alignment:
Q  227 gtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||  ||||||| || | ||||||||||||||||||||||| |||||| |||| ||||| ||||||  | |||| ||||||||||||||    
T  19621656 gtgtacactcctttgtaccattctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacatttttccatttgcgtgaccactattttt 19621563  T

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Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 521
Target Start/End: Original strand, 35922858 - 35922927
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||| |||| |||||| |||||||||||| |||||||||| |||||||||||| | |||||||||||||    
T  35922858 tggtcccacagaccataaatttggttaacttaaatttttcaaagtgatacaaagcggtgtacacattaag 35922927  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 22169581 - 22169651
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||| |||| |||||||||||| ||| ||||||||||| ||||||||| |||||| ||||||    
T  22169581 tgtggtcacacatatcataaatttggttaactaaaaattttcagagtggtacaaaggg-tgtacagattaag 22169651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 13312722 - 13312776
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  13312722 tgtggtcacacaaatcatatatatggttaactgaaatttttcagagtggtacaaa 13312776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 31189566 - 31189512
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||    
T  31189566 tgtggtcacacatactatatatttggttaactgaaattttcgagagtggtacaaa 31189512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 31189710 - 31189762
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacac 515  Q
    |||||||||||||||||||||||||||| | |||| ||||||||| |||||||    
T  31189710 accatatatttggttaactgaaattttttaaagtggtacaaaggggtgtacac 31189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 506
Target Start/End: Complemental strand, 33958952 - 33958909
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagg 506  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||    
T  33958952 accatatatttggttaagtgaaatttttcagagtggtacaaagg 33958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 38522164 - 38522060
Alignment:
Q  213 gtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgacc 311  Q
    ||||||||||| || ||||||||| ||| ||||| ||||||||  ||| | |||||||||| |||||||| || ||||| ||||||| | ||||||||||    
T  38522164 gtagacatctttaacgtgtacacccctt-gtatc-ctttgaaattttttaattaaccaaatatatggtctatgtgaccacattttttcaattgcatgacc 38522067  T
Q  312 actattt 318  Q
    |||||||    
T  38522066 actattt 38522060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 22169376 - 22169473
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||||||||||||   |||||||| |||  ||||||||||||||| |||| |||||  | || || || ||||||| |||||| ||||||||||||    
T  22169376 cttaatgtgtacaccctattgtatcatttttgaaaatttcagttaactaaatatatggaatatgtgatcacattttttcagttgcgtgaccactattt 22169473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 526
Target Start/End: Complemental strand, 16095587 - 16095527
Alignment:
Q  466 atatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||||| |||||||||  |||||| || |||||| |||||||||||| |||||    
T  16095587 atatatttggttaattgaaattttcgagagtggtagaaaggggtgtacacattaaatgtgt 16095527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 321
Target Start/End: Original strand, 7156000 - 7156099
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt 321  Q
    |||||||||||| |  |||||| ||||||  |||||||||||||| ||||| |||||| | |  || || ||||||| ||||  ||||||||||||||||    
T  7156000 ttaatgtgtacatctttttgtaccactttagaaaatttcagttaatcaaatatatggtttatatgatcacattttttcagttatatgaccactatttttt 7156099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 497
Target Start/End: Original strand, 36169452 - 36169499
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtg 497  Q
    ||||||||||||||||||||||||| | | ||||||||||| ||||||    
T  36169452 tgtggtcacacataccatatatttgatcagctgaaatttttgagagtg 36169499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 13312696 - 13312730
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||| |||||||||||||||    
T  13312696 aaatagtggtcacgcaactaaaaaaatgtggtcac 13312730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 489
Target Start/End: Complemental strand, 15221625 - 15221587
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttt 489  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  15221625 gtggtcacacaaaccatatatttggttaactaaaatttt 15221587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 7156057 - 7156000
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||||||||  | |||| ||||||  ||||||||||||||    
T  7156057 accatatatttgattaactgaaattttctaaagtggtacaaaaagatgtacacattaa 7156000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 504
Target Start/End: Complemental strand, 30704362 - 30704321
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||||| |||||||||||||| ||||||| ||||||    
T  30704362 accatatatttgattaactgaaattttacagagtggtacaaa 30704321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 30704546 - 30704505
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcag 262  Q
    ||||||||||||||  |||| |||||||||||||||||||||    
T  30704546 cttaatgtgtacacttctttatatcactttgaaaaatttcag 30704505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 15221548 - 15221624
Alignment:
Q  215 agacatcttaatgtgtacac-cgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggacca 290  Q
    |||||| ||||||||||||| ||||||||| || | |  ||||||| |||||||||||| |||||| |||| |||||    
T  15221548 agacattttaatgtgtacacacgctttgtaccattctcgaaaattttagttaaccaaatatatggtttgtgtgacca 15221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 22169447 - 22169371
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||| ||||| || |||||||||| |||||||||||||||  | | ||||||||  || ||||||||||||| ||||    
T  22169447 tgtgatcacatattccatatatttagttaactgaaattttcaaaaatgatacaatagggtgtacacattaagggtgt 22169371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 7e-72; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 204 - 424
Target Start/End: Original strand, 29676982 - 29677202
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    ||||||||| |||||| ||| |||||||||  | ||||||| ||||||||||||||| |||||||||||| ||||| ||||| ||||| |||||||| ||    
T  29676982 caatgatagttagacacctttaatgtgtacgtccctttgtagcactttgaaaaattttagttaaccaaatatatggcctgtgtgaccacatttttta-gt 29677080  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  29677081 tgcatgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtgaccacatttttcagcttctaaa 29677180  T
Q  403 tagtggtcacgcaactgaaaaa 424  Q
    |||||||||| |||||||||||    
T  29677181 tagtggtcactcaactgaaaaa 29677202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 206 - 429
Target Start/End: Complemental strand, 34490399 - 34490175
Alignment:
Q  206 atgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttg 304  Q
    |||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||| || |||| ||||||||||| ||||| ||||||| |||||    
T  34490399 atgataggtagacactcttaatgtgtacaccactttgtaccactctgaaaaatttcagtttacaaaatatatggtctgtgtgaccacatttttttagttg 34490300  T
Q  305 catgaccacta-ttttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    | ||||||||| |||||||| ||||||||||||||||||| | ||||||||||||||| |||||||||| |||| ||| || |||||| |||||||||||    
T  34490299 cgtgaccactagttttttcagaatttatttggttaactaactagaaaaatagtggtcatgcgcatttta-ttgcatgaccacattttttagcttctaaat 34490201  T
Q  404 agtggtcacgcaactgaaaaaatgtg 429  Q
    ||||||||  ||||||||||||||||    
T  34490200 agtggtcatacaactgaaaaaatgtg 34490175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 248 - 429
Target Start/End: Original strand, 29167752 - 29167931
Alignment:
Q  248 tttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatgg 347  Q
    |||||||||||||||||||| |||| |||||| |||| ||||| |||||||| ||||| ||||||||| ||||||  ||||||||||||||||||| |||    
T  29167752 tttgaaaaatttcagttaactaaatatatggtttgtgtgaccacatttttta-gttgcctgaccactagtttttcggaatttatttggttaactaagtgg 29167850  T
Q  348 aaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtg 429  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  29167851 aaaaatagtggtcatgcgcatttta-ttgcgtgaccatattttttagcttctaaatagtggtcacgcaactgaaaaaatgtg 29167931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 205 - 425
Target Start/End: Complemental strand, 38952119 - 38951896
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    |||||||| |||||| | |||| || |||||| |||||||||||| |||||||||||||||||| |||| |||||| | || ||||||||||||| ||||    
T  38952119 aatgatagatagacaaccttaaagtatacacctctttgtatcactctgaaaaatttcagttaacaaaatgtatggtatatgtgaccatatttttttagtt 38952020  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcata--tttttcagcttctaa 401  Q
    || |||||||||||| | |||||||||||||||||||||| | |||||||||||||||  ||||||||||||||||||  |||  |||||||| ||||||    
T  38952019 gcttgaccactatttctccaaaatttatttggttaactaagtagaaaaatagtggtcagacgcattttagttgcgtgactatatttttttcagtttctaa 38951920  T
Q  402 atagtggtcacgcaactgaaaaaa 425  Q
    |||||||||||||| |||||||||    
T  38951919 atagtggtcacgcagctgaaaaaa 38951896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 222 - 417
Target Start/End: Complemental strand, 5831726 - 5831531
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt 321  Q
    |||| ||||||||| |||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||| ||||||||| ||||     
T  5831726 ttaacgtgtacacccctttgtatcactctgaaaaatttcaattaaccaaatatatggtctgtgtgaccatatttttttagttgcgtgaccactaattttc 5831627  T
Q  322 caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaac 417  Q
    || ||||||||||||||||||| ||||||||| ||||| |  |||||||||||| || || ||||||||| | ||||||||||||||||| |||||    
T  5831626 cagaatttatttggttaactaagtggaaaaattgtggtaatacgcattttagttacgggaccatattttttaacttctaaatagtggtcatgcaac 5831531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 240 - 434
Target Start/End: Complemental strand, 42604394 - 42604200
Alignment:
Q  240 tgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaa 339  Q
    |||| ||||||||||| |||  ||||| ||||| |||||| |||| ||||| ||| ||| |||||  ||| ||||||||||||| ||||||||| |||||    
T  42604394 tgtaccactttgaaaatttttggttaatcaaatatatggtttgtgtgaccacattgttttagttgtgtgatcactattttttcagaatttatttcgttaa 42604295  T
Q  340 ctaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||| ||||||||||||||||||||||||||||||||  ||| |||| |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  42604294 ctaagtggaaaaatagtggtcacgcgcattttagttgtatgaccatacttttaagcttctaaatagtggtgatgcaactgaaaaaatgtggtcac 42604200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 239 - 426
Target Start/End: Complemental strand, 25238653 - 25238467
Alignment:
Q  239 ttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggtta 338  Q
    ||||| |||| ||||||||||||||||| ||||| |||||| | || ||||| ||||||| ||||   |||| |||| ||||||| ||||||||||||||    
T  25238653 ttgtaccactctgaaaaatttcagttaatcaaatatatggtttctgtgaccacatttttttagttatgtgactactagtttttcagaatttatttggtta 25238554  T
Q  339 actaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaat 426  Q
    ||||| ||||||||||||||| |||| ||||||| || ||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  25238553 actaagtggaaaaatagtggttacgcacatttta-ttacgtgaccacattttttagcttctaaatagtggtcacgcaactgaaaaaat 25238467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 220 - 364
Target Start/End: Complemental strand, 2570103 - 2569960
Alignment:
Q  220 tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttt 319  Q
    |||||||||||||||| ||||||| | || || ||||||| |||||||||| | |||||| ||||  |||||||||||| |||||| |||||||||||||    
T  2570103 tcttaatgtgtacacc-ctttgtaccgctctggaaaatttaagttaaccaagtatatggtttgtgttaccatattttttgagttgcgtgaccactatttt 2570005  T
Q  320 ttcaaaatttatttggttaactaaatggaaaaatagtggtcacgc 364  Q
    |  | ||||||||||||||||||| ||||||||||||||||||||    
T  2570004 tctagaatttatttggttaactaagtggaaaaatagtggtcacgc 2569960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 222 - 424
Target Start/End: Complemental strand, 34364424 - 34364224
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt 321  Q
    |||| ||||||| | |||||||  ||| |||||||||| |||||| ||||| |||| ||||||  | || ||| |||| ||||  |||||| |||||||     
T  34364424 ttaacgtgtacatccctttgtactactctgaaaaatttaagttaatcaaatatatgctctgtgtaatcacattcttta-gttgtgtgaccattatttttc 34364326  T
Q  322 caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaa 421  Q
    || ||||| ||||||||||||| || |||||| |||||||||  ||||||||||| |||| || || |||||||||||||||| ||| ||||||||||||    
T  34364325 cagaatttttttggttaactaagtgaaaaaattgtggtcacgttcattttagttgtgtgaccacatgtttcagcttctaaata-tggccacgcaactgaa 34364227  T
Q  422 aaa 424  Q
    |||    
T  34364226 aaa 34364224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 327 - 424
Target Start/End: Original strand, 517433 - 517530
Alignment:
Q  327 tttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaa 424  Q
    ||||||||||||||||| |  ||||||||| |||| |  |||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||||    
T  517433 tttatttggttaactaagttaaaaaatagtagtcatgttcattttagttgcgtgatcatattttttaacttctaaatagtggttacgcaattgaaaaa 517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 9929677 - 9929778
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaa 352  Q
    ||||||| |||||||||||| |||||| |||  ||||| ||| ||| ||||||  ||||  |||||||||||||||||||||||||||||||||||||||    
T  9929677 aaaatttaagttaaccaaatatatggtttgtatgaccacattattttagttgcgcgaccgatattttttcaaaatttatttggttaactaaatggaaaaa 9929776  T
Q  353 ta 354  Q
    ||    
T  9929777 ta 9929778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 5831658 - 5831726
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||    
T  5831658 tggtcacacagaccatatatttggttaattgaaatttttcagagtgatacaaaggggtgtacacgttaa 5831726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 327 - 403
Target Start/End: Complemental strand, 2996101 - 2996025
Alignment:
Q  327 tttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||||||  |||||||||| || ||||||||||||| |||||||| || ||||||||||||||||||    
T  2996101 tttatttggttaactaagcggaaaaatagcggccacgcgcattttatttgcgtgaccacatttttcagcttctaaat 2996025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 34490312 - 34490388
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||| || |||||||||||||||||||| ||||||| | ||||||||||||| ||||    
T  34490312 tgtggtcacacagaccatatattttgtaaactgaaatttttcagagtggtacaaagtggtgtacacattaagagtgt 34490388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 13350889 - 13351004
Alignment:
Q  209 ataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcat 307  Q
    ||||||||||||| ||||||||||||||  |||||| |||| |  |||||||||||||||||||| |||||| |||| || ||  |||||| ||||||||    
T  13350889 ataggtagacatccttaatgtgtacacccttttgtaccactctcgaaaatttcagttaaccaaatatatggtatgtgtgatcacgttttttcagttgcat 13350988  T
Q  308 gaccactattttttca 323  Q
    | | ||||||||||||    
T  13350989 ggctactattttttca 13351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 5855228 - 5855282
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5855228 tgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaa 5855282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 13350968 - 13350902
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||| || |||||||||||||    
T  13350968 tcacacataccatatatttggttaactgaaattttcgagagtggtacaaaagggtgtacacattaag 13350902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 13351009 - 13351079
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| | ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||    
T  13351009 tgtggtcacaaagaccatatatttggttaagttaaatttttcagagtggtacaaaggggtgtacacattaa 13351079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 29677071 - 29677001
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||||  |||||||||||||||||| |||||||||| |||| |||||||||| |||||||||||    
T  29677071 tgtggtcacacaggccatatatttggttaactaaaatttttcaaagtgctacaaagggacgtacacattaa 29677001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 9468199 - 9468091
Alignment:
Q  326 atttatttggttaactaaatgg-aaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaa 424  Q
    |||||||||||||||||| ||| ||||||||| |||||   ||||||||||| ||||||| ||||| |||||| |||||| ||||||  |||||||||||    
T  9468199 atttatttggttaactaagtggcaaaaatagtagtcacatacattttagttgtgtgatcacattttacagcttttaaata-tggtcagacaactgaaaaa 9468101  T
Q  425 atgtggtcac 434  Q
    || |||||||    
T  9468100 atatggtcac 9468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 9929950 - 9929865
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| || |||||||||||||| ||||| |||| ||||||||||| ||||| ||||||| | |||| |||||||||||||||||    
T  9929950 tttgtaccattttgaaaaatttcaattaactaaatatatggtctgtgtgaccacattttttcatttgcgtgaccactattttttca 9929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 5855096 - 5855021
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||  |||||||||||||| |||||||| ||||    
T  5855096 tgtggtcacacagaccatatatttggttagctgaaatttttca-agtagtacaaagggatgtaaacattaagcgtgt 5855021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 204 - 290
Target Start/End: Complemental strand, 13351098 - 13351011
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggacca 290  Q
    ||||||||| |||||||||| |||||||||||| ||||||| |||| |||||||||| | |||||||||| |||||||| || |||||    
T  13351098 caatgatagctagacatctttaatgtgtacacccctttgtaccactctgaaaaatttaacttaaccaaatatatggtctttgtgacca 13351011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 505
Target Start/End: Original strand, 38952033 - 38952086
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaag 505  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  38952033 tggtcacatataccatacattttgttaactgaaatttttcagagtgatacaaag 38952086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 5855012 - 5855134
Alignment:
Q  208 gataggtagacat-cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgca 306  Q
    ||||||||||||  |||||||| |||| | |||||||  |||| |||||||||||| ||||||||| ||||||||||| ||||| || |||| |||||      
T  5855012 gataggtagacacgcttaatgtttacatccctttgtactactt-gaaaaatttcagctaaccaaatatatggtctgtgtgaccacatattttcagttgtg 5855110  T
Q  307 tgaccactattttttcaaaattta 330  Q
    ||||||| |||||| ||| |||||    
T  5855111 tgaccacaatttttccaacattta 5855134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 5855317 - 5855202
Alignment:
Q  204 caatgataggtagacatct-taatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| |  |||| |||||||   |||||| |||| |||||||||| |||||||||||| |||||| |||| ||||| ||||  | |||    
T  5855317 caatgataggtagacaccactaatatgtacactcttttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttagttagt 5855218  T
Q  303 tgcatgaccactattt 318  Q
    ||| ||||||||||||    
T  5855217 tgcgtgaccactattt 5855202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 521
Target Start/End: Complemental strand, 34941762 - 34941719
Alignment:
Q  478 aactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  34941762 aactgaaatttttcagagtggtacaaagggatgtacacattaag 34941719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 25238600 - 25238653
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaa 503  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||| |||||    
T  25238600 tgtggtcacagaaaccatatatttgattaactgaaatttttcagagtggtacaa 25238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 526
Target Start/End: Original strand, 34364369 - 34364430
Alignment:
Q  465 catatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||| |||||    
T  34364369 catatatttgattaacttaaatttttcagagtagtacaaagggatgtacacgttaaatgtgt 34364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 38244863 - 38244794
Alignment:
Q  254 aaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||| |||||| ||||||||||| ||||| ||||||| |||||| |||||||||| ||||||    
T  38244863 aaatttaagttagccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccactatcttttca 38244794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 504
Target Start/End: Original strand, 517539 - 517585
Alignment:
Q  458 cacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||    
T  517539 cacatatcatatatttggttaacttaaatttttgagagtgatacaaa 517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 5831442 - 5831548
Alignment:
Q  212 ggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgacc 311  Q
    ||||||||  |||||| |||||||  |||||| || | |||||||||| ||||||| |||  |||||| |||| || |||||||| |  |||||||||||    
T  5831442 ggtagacactttaatgagtacacccttttgtaacattctgaaaaattttagttaactaaagatatggtatgtgtgatcatattttgtttgttgcatgacc 5831541  T
Q  312 actattt 318  Q
    |||||||    
T  5831542 actattt 5831548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 24708074 - 24708128
Alignment:
Q  269 aaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||| ||||||||||| ||||| |||||||||| ||| |||||||||||||||||    
T  24708074 aaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattttttca 24708128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 492
Target Start/End: Complemental strand, 29167796 - 29167754
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttca 492  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  29167796 tgtggtcacacaaaccatatatttagttaactgaaatttttca 29167754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 521
Target Start/End: Original strand, 29677206 - 29677264
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| |||||| |||||||| |||||| ||||||| | |||||||||||||    
T  29677206 accatatatttgtttaacttaaatttttgagagtggtacaaagaggtgtacacattaag 29677264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 34490091 - 34490204
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    |||||| |||||||| | |||||||||| | |  || ||| |||| || ||||||||||||||| |||| ||||||||||| || || ||||||| ||||    
T  34490091 aatgattggtagacacccttaatgtgtatatcttttggtaccactatgtaaaatttcagttaactaaatatatggtctgtgtga-cacattttttcagtt 34490189  T
Q  304 gcatgaccactattt 318  Q
    | |||||||||||||    
T  34490190 gtatgaccactattt 34490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 34941696 - 34941762
Alignment:
Q  199 tacaccaatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagtt 264  Q
    |||| |||||||||| ||||||| |||||||||||| | ||||||| |||| |||||||||||||||    
T  34941696 tacaacaatgataggaagacatccttaatgtgtacatccctttgtaccactctgaaaaatttcagtt 34941762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 523
Target Start/End: Complemental strand, 2995991 - 2995919
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtg 523  Q
    |||||||||||| |||||||||||| |||| | || ||||||| |||| |||||| ||||||||||||| ||||    
T  2995991 tgtggtcacaca-accatatatttgattaattaaattttttcaaagtggtacaaaaggatgtacacattgagtg 2995919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 5831517 - 5831452
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||||||| ||| ||||||| |||||||||||| || |||||| || ||||| ||||||    
T  5831517 tcacacataccatatctttagttaactaaaatttttcagaatgttacaaaagggtgtactcattaa 5831452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 485
Target Start/End: Complemental strand, 9468097 - 9468064
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaa 485  Q
    ||||||||||||||||||||||||||||||||||    
T  9468097 tggtcacacataccatatatttggttaactgaaa 9468064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 520
Target Start/End: Original strand, 28499663 - 28499720
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||||||||||||||||||| ||| || ||||||  ||||||||| ||||    
T  28499663 accatatatttggttaactgaaattttttagaatggtacaaaatgatgtacacgttaa 28499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 17227498 - 17227554
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| ||||| |||||||||| ||| ||||||||||| |||||    
T  17227498 ccaaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactattctttca 17227554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 504
Target Start/End: Complemental strand, 34364221 - 34364169
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||| ||||||    
T  34364221 tggtcacacagaccatatatttagttaacttaaattttccagagtggtacaaa 34364169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 526
Target Start/End: Complemental strand, 34490175 - 34490103
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||| ||||||||||| ||||||||||||||| || |||| ||| ||  ||| ||||||||||| ||||    
T  34490175 gtcacacagaccatatatttagttaactgaaattttacatagtggtaccaaaagatatacacattaagggtgt 34490103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 434
Target Start/End: Original strand, 38244801 - 38244833
Alignment:
Q  402 atagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||||||||||||||    
T  38244801 atagtggtcacgcaactgaaaaaatgtggtcac 38244833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 279
Target Start/End: Original strand, 42604114 - 42604186
Alignment:
Q  208 gataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggt 279  Q
    |||||||||||| | ||||||||||||||  |||||| || ||| |||||||||| |||||||||| ||||||    
T  42604114 gataggtagacaaccttaatgtgtacacccatttgtaccattttaaaaaatttcaattaaccaaatgtatggt 42604186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 9468064 - 9468111
Alignment:
Q  257 tttcagttaaccaaatttatggtctgtgggaccatattttttaagttg 304  Q
    |||||||||||||||| |||||| |||| ||||||||||||| |||||    
T  9468064 tttcagttaaccaaatatatggtatgtgtgaccatattttttcagttg 9468111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 34364169 - 34364228
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttt 297  Q
    |||||| |||| || ||||||| ||||||| |||| ||||||||||| ||||||||||||    
T  34364169 tttgtaccactctggaaaatttaagttaactaaatatatggtctgtgtgaccatattttt 34364228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 330
Target Start/End: Original strand, 2995924 - 2996029
Alignment:
Q  224 aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||||||| |  |||||| |||||||||||| || | |||| ||||| |||||| |||| ||||| ||||||| |||||  ||  |||||||||||||    
T  2995924 aatgtgtacatccttttgtaccactttgaaaaaatttaattaatcaaatatatggt-tgtgtgaccacattttttcagttgtgtggtcactattttttca 2996022  T
Q  324 aaattta 330  Q
     ||||||    
T  2996023 gaattta 2996029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 9929716 - 9929662
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||| ||| ||||||||||||||||||| |||||||  |||||| ||||||    
T  9929716 tgtggtcatacaaaccatatatttggttaacttaaattttcaagagtggtacaaa 9929662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 9929870 - 9929904
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||| |||||||||||||||||    
T  9929870 aaatagtggtcacgcaaatgaaaaaatgtggtcac 9929904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 492
Target Start/End: Original strand, 9929896 - 9929938
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttca 492  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  9929896 tgtggtcacacagaccatatatttagttaattgaaatttttca 9929938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 29677264 - 29677206
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggt 279  Q
    ||||||||||||||| ||||||| |||| | |||||||| |||||| ||||| ||||||    
T  29677264 cttaatgtgtacacctctttgtaccactctcaaaaatttaagttaaacaaatatatggt 29677206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 29168585 - 29168548
Alignment:
Q  247 ctttgaaaaatttcagttaaccaaatttatggtctgtg 284  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  29168585 ctttgtaaaatttcagttaaccaaatatatggtctgtg 29168548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 2996125 - 2996189
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtaca 514  Q
    ||||||||||||||| |||||||| ||||| | |||||||||  | ||||| |||||| ||||||    
T  2996125 tgtggtcacacatactatatatttagttaatttaaatttttctaaatgatataaaggggtgtaca 2996189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 461 - 521
Target Start/End: Complemental strand, 42604188 - 42604128
Alignment:
Q  461 ataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||| |||||||||| |||||||||| | | || |||||| || |||||||||||||    
T  42604188 ataccatacatttggttaattgaaattttttaaaatggtacaaatgggtgtacacattaag 42604128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 1e-70; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 38606724 - 38606955
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||||| ||||| | || ||| ||||||| |||| |||||||||||||||||| |||| |||||| |||| ||||||||||||| ||     
T  38606724 caatgataggtagacatccttaatctttagacccctttgtaccactctgaaaaatttcagttaactaaatatatggtatgtgtgaccatatttttttagc 38606823  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| |||||||||| ||| || ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| || |||||||||||||||||    
T  38606824 tgcgtgaccactatgtttccagaatttatttggttaactaagtggaaaaatagtggtcacacgcattttcgttgcgtgaccacatttttcagcttctaaa 38606923  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||| ||||||||||||||||||||||||    
T  38606924 tagtggtaacgcaactgaaaaaatgtggtcac 38606955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 247 - 434
Target Start/End: Original strand, 5321901 - 5322089
Alignment:
Q  247 ctttgaaaaatttc-agttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaat 345  Q
    |||||||||||||  ||||||  |||| |||||  |||| ||||| ||||||| |||||| ||||||||||||||| | ||||||||||||||||||| |    
T  5321901 ctttgaaaaattttgagttaattaaatatatggcatgtgtgaccacatttttttagttgcgtgaccactatttttttagaatttatttggttaactaagt 5322000  T
Q  346 ggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||    
T  5322001 ggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaataatgatcacgcaattgaaaaaatgtgatcac 5322089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 238 - 431
Target Start/End: Original strand, 15714626 - 15714819
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggtt 337  Q
    |||||| |||| |||||||||||||||| | |||| |||| | | || ||||| ||||| | |||||| |||||||||||||||| ||||||||||||||    
T  15714626 tttgtaccactctgaaaaatttcagttagctaaatatatgatttatgtgaccacattttgttagttgcgtgaccactattttttcgaaatttatttggtt 15714725  T
Q  338 aactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggt 431  Q
    |||||| |||||||||||||||||||  |||||||||| ||||| ||||||||||||||| |||||||| ||||| || |||||||||||||||    
T  15714726 aactaagtggaaaaatagtggtcacggacattttagttacgtgaccatatttttcagcttttaaatagtagtcacacagctgaaaaaatgtggt 15714819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 205 - 434
Target Start/End: Complemental strand, 5573992 - 5573762
Alignment:
Q  205 aatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatg-gtctgtgggaccatattttttaagt 302  Q
    ||||||||||||||  ||| |||||||||||   |||||| |||| | ||| |||||||||||| |||| |||  |||| || ||||| ||||||| | |    
T  5573992 aatgataggtagactcctttaatgtgtacactcttttgtaccactctaaaagatttcagttaactaaatatatatgtctttgtgaccacatttttttaat 5573893  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||| || |||||||| ||||||||    
T  5573892 tgcgtgaccactattttt-caaaatttatttggttaactaagtggaaaaatagtggtcacgtgcattttagttccatgaccacatttttcaacttctaaa 5573794  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||| ||||||||||| |||||    
T  5573793 tagtggtcacgcaattgaaaaaatgtagtcac 5573762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 221 - 434
Target Start/End: Original strand, 26493251 - 26493463
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||||   ||| || |||||| |||||||| | |||| ||||| |||||||| || ||||| ||| ||| ||||||  ||||| || ||||    
T  26493251 cttaatgtgtacacttttttataccactttaaaaaattttacttaatcaaatatatggtctatgtgaccacattgttttagttgcgcgaccattaatttt 26493350  T
Q  321 tcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactga 420  Q
    ||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||| || || |||||||    
T  26493351 tcagaatttatttgattaactaaatggaaaaatagttgtcacgcgca-tttagttgcgtgaccacatttttcagcttctaaatagtagttacacaactga 26493449  T
Q  421 aaaaatgtggtcac 434  Q
    ||||||||| ||||    
T  26493450 aaaaatgtgatcac 26493463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 281 - 432
Target Start/End: Original strand, 1251451 - 1251601
Alignment:
Q  281 tgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtg 380  Q
    |||| ||||| |||| || |||||| |||||||||||||| || ||||||||||||||||||| ||| |||||||||||| ||| |||||||||| | ||    
T  1251451 tgtgtgaccacatttgtttagttgcgtgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcgcgcacattttagtt-catg 1251549  T
Q  381 atcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtc 432  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  1251550 atcacatttttcaggttttaaatagtggtcacgcaactgaaaaaatgtggtc 1251601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 307 - 432
Target Start/End: Original strand, 1240901 - 1241025
Alignment:
Q  307 tgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagt 406  Q
    |||||||||||||| || ||||||||||||||||||| ||| |||||||||||||||| |||||||||| | ||| || |||||||||||||||||||||    
T  1240901 tgaccactatttttccataatttatttggttaactaagtgggaaaatagtggtcacgcacattttagtt-catgaccacatttttcagcttctaaatagt 1240999  T
Q  407 ggtcacgcaactgaaaaaatgtggtc 432  Q
    |||||| ||||||||||||| |||||    
T  1241000 ggtcacacaactgaaaaaatatggtc 1241025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 29367076 - 29367179
Alignment:
Q  328 ttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatg 427  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| |||||||||     
T  29367076 ttatttggttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcttcaaaatagtggtcacacaattgaaaaaata 29367175  T
Q  428 tggt 431  Q
    ||||    
T  29367176 tggt 29367179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 226 - 432
Target Start/End: Original strand, 24575827 - 24576023
Alignment:
Q  226 tgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaa 325  Q
    |||||||||| |||| || |||||| |||| |||| ||||||||||| ||||||||||| ||||||||| ||| |||||  |||||||||||||| || |    
T  24575827 tgtgtacaccccttt-taccactttaaaaagtttcggttaaccaaatatatggtctgtgcgaccatattattttagttgtctgaccactatttttccaga 24575925  T
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaa 425  Q
    |||||||||||||| ||| || |||||||||||||||  ||         | ||| ||| |||||||||||||||||||||||| ||| |||| ||||||    
T  24575926 atttatttggttaaataagtgaaaaaatagtggtcacttgc---------gtgtggtcacatttttcagcttctaaatagtggtaacgaaactcaaaaaa 24576016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 430
Target Start/End: Original strand, 31273555 - 31273685
Alignment:
Q  300 agttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 399  Q
    |||||| ||| ||| ||||||| | ||||||||||||||||| | || |||||||| | ||||| ||||||||| ||| ||| |||||||||||||||||    
T  31273555 agttgcgtgatcaccattttttaagaatttatttggttaacttagtgaaaaaatagcgttcacgtgcattttagctgcatgaccatatttttcagcttct 31273654  T
Q  400 aaatagtggtcacgcaactgaaaaaatgtgg 430  Q
    |||||| ||||||||||||||||| ||||||    
T  31273655 aaataggggtcacgcaactgaaaacatgtgg 31273685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 264 - 434
Target Start/End: Complemental strand, 31596947 - 31596777
Alignment:
Q  264 taaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaa-aatttatttggttaactaaatggaaaaatagtggtcac 362  Q
    |||| |||| |||| | |||| ||| ||||||||| |||||  |||||| || |||||| | ||||||||||||||| ||| ||||||||||||| | ||    
T  31596947 taactaaatatatgatttgtgtgactatatttttttagttgtgtgaccattagtttttccataatttatttggttaattaagtggaaaaatagtgattac 31596848  T
Q  363 gcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
     ||||||| |||||  ||| || |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  31596847 acgcattt-agttgtctgaccacatttttcatcttctaaatagtggtaacgcaactgaaaaaatgtggtcac 31596777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 32959635 - 32959542
Alignment:
Q  341 taaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||| | ||||||||||| |||| ||||||||| ||||||| ||| ||||||||| || |||||||||||| ||||    
T  32959635 taaatggaaaaatagtggtcacacacattttagttgtgtgaccatattttttagcttcttaatggtggtcacgtaattgaaaaaatgtgatcac 32959542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 31596704 - 31596811
Alignment:
Q  212 ggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgac 310  Q
    |||||||| ||||||| |||||||| ||||||| |||||||||||||| ||||||| ||||| |||||| |||| ||||| ||||||| |||||| | ||    
T  31596704 ggtagacactcttaatatgtacacctctttgtaccactttgaaaaattacagttaatcaaatatatggtatgtgtgaccacattttttcagttgcgttac 31596803  T
Q  311 cactattt 318  Q
    ||||||||    
T  31596804 cactattt 31596811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 429
Target Start/End: Complemental strand, 6809959 - 6809782
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt-tcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||||||||| ||||| ||| || |||| ||||| ||||||  |||||  |||  ||||||||| ||| ||||||||||||||| |||||||||||    
T  6809959 aaaatttcagttaatcaaatatatagtatgtgtgaccacatttttatagttgtgtgataactatttttctcataatttatttggttaattaaatggaaaa 6809860  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtg 429  Q
    |||||||||||  | |||||||| | || | || |||||| | ||| |||||||||  || |||| |||| |||||||    
T  6809859 atagtggtcacatgtattttagtcgagtaaccacattttttatcttttaaatagtgaccatgcaattgaataaatgtg 6809782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 33286263 - 33286199
Alignment:
Q  370 ttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  33286263 ttagttgcgtgaccacatttttcagcttctaaaaagtggtcacgcaattgaaaaaatgtggtcac 33286199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 452 - 507
Target Start/End: Complemental strand, 38606811 - 38606756
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  38606811 tggtcacacataccatatatttagttaactgaaatttttcagagtggtacaaaggg 38606756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 451 - 519
Target Start/End: Original strand, 24576180 - 24576248
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatta 519  Q
    ||||||||||| ||||||||||||||||| |||||||||  |||||| ||||||||| |||||||||||    
T  24576180 gtggtcacacagaccatatatttggttaattgaaattttcgagagtggtacaaaggggtgtacacatta 24576248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 31596785 - 31596709
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||| | |||||| |||||| ||||    
T  31596785 tgtggtcacacataccatatatttgattaactgtaatttttcaaagtggtacaaagaggtgtacatattaagagtgt 31596709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 318
Target Start/End: Complemental strand, 1251676 - 1251569
Alignment:
Q  212 ggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgac 310  Q
    |||||||||| ||||||||||||||  |||||| |||| |  ||||||||||||||| |||| |||| | |||| ||||| ||||||| |||||| ||||    
T  1251676 ggtagacatccttaatgtgtacacccatttgtaccactctcgaaaatttcagttaactaaatatatgatttgtgagaccacattttttcagttgcgtgac 1251577  T
Q  311 cactattt 318  Q
    ||||||||    
T  1251576 cactattt 1251569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 450 - 517
Target Start/End: Original strand, 5322081 - 5322148
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacat 517  Q
    |||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||||  |||||||||    
T  5322081 tgtgatcacacagaccatatatttggttaattgaaatttttgagagtgatacaaaggagtgtacacat 5322148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 15233318 - 15233241
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||| ||| || |||||||||||||| ||||||||||||||||||| ||  ||||||| ||| |||||    
T  15233318 atttatttggttaattaagtgaaaaaatagtggtcatgcgcattttagttgcgtgaccacgtttttcaacttttaaat 15233241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 24537982 - 24538078
Alignment:
Q  307 tgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaata 404  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||||| || ||| ||  |||| | ||| ||||||||| ||||||||||||    
T  24537982 tgaccactaattttccaaaatttatttggttaaccatatggaaaaatagtggtaacacgcgttgcagttacatgaccatattttt-agcttctaaata 24538078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 5322148 - 5322075
Alignment:
Q  225 atgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt 298  Q
    ||||||||||  |||||||||||| | |||||||||| |||||||||| ||||||||||| || || |||||||    
T  5322148 atgtgtacactcctttgtatcactctcaaaaatttcaattaaccaaatatatggtctgtgtgatcacatttttt 5322075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 15233195 - 15233138
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||||||||||||| || ||| ||| ||||||||||||||    
T  15233195 accatatatttgattaactgaaatttttcagattggtacgaagagatgtacacattaa 15233138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 28700117 - 28700060
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||| |||||||||||||||| ||| |||||||||  ||||||||||||||    
T  28700117 accatatatttagttaactgaaattttttagaatgatacaaaatgatgtacacattaa 28700060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 364
Target Start/End: Original strand, 26914613 - 26914748
Alignment:
Q  228 tgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaat 327  Q
    |||||| | ||||| || ||| |||||||||| || |||| |||| |||| | |||| || || |||||||| ||| | ||||||||||||||  | |||    
T  26914613 tgtacatccctttgcattactctgaaaaatttaagctaactaaatatatgatttgtgtgatcacatttttta-gttacgtgaccactatttttcaagaat 26914711  T
Q  328 ttatttggttaactaaatggaaaaatagtggtcacgc 364  Q
    |||||||||||| | | |||||||||| |||||||||    
T  26914712 ttatttggttaattgagtggaaaaataatggtcacgc 26914748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 1251595 - 1251666
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||| |||| | ||||||||| |||||||||||||||  |||||| |||||| || |||||||||||||    
T  1251595 tgtggtctcacaaatcatatatttagttaactgaaattttcgagagtggtacaaatgggtgtacacattaag 1251666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 24576248 - 24576181
Alignment:
Q  223 taatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggacca 290  Q
    ||||||||||||| ||||||| |||| |  ||||||||| |||||||||| ||||||||||| |||||    
T  24576248 taatgtgtacacccctttgtaccactctcgaaaatttcaattaaccaaatatatggtctgtgtgacca 24576181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 24919925 - 24919866
Alignment:
Q  264 taaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    ||||||||| |||| |||||| ||||| |||||||||| ||| |||||||||||||||||    
T  24919925 taaccaaatatatgttctgtgtgaccacattttttaaggtgcgtgaccactattttttca 24919866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 330
Target Start/End: Original strand, 28700045 - 28700166
Alignment:
Q  208 gataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgca 306  Q
    ||||||| |||||||| |||||||||| |  ||||||||| | | |||||||||||||||| |||| |||||| | || |||||||||||||  ||||||    
T  28700045 gataggttgacatctttaatgtgtacatcattttgtatcattctaaaaaatttcagttaactaaatatatggt-tatgtgaccatatttttt-cgttgca 28700142  T
Q  307 tgaccactattttttcaaaattta 330  Q
    ||||  |||||||| || ||||||    
T  28700143 tgacttctatttttccagaattta 28700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 318
Target Start/End: Complemental strand, 38607028 - 38606921
Alignment:
Q  212 ggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgac 310  Q
    |||||||||| |||||||||||||| |||||||  ||| |  ||||||||||||||| | || |||||| || | ||||| ||||||| |||||| | ||    
T  38607028 ggtagacatccttaatgtgtacacccctttgtacaactctccaaaatttcagttaactacatatatggtttgcgtgaccacattttttcagttgcgttac 38606929  T
Q  311 cactattt 318  Q
    ||||||||    
T  38606928 cactattt 38606921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 38606947 - 38607018
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||||| || ||||||||| | |||||||||||||||  |||||  ||||||||| |||||||||||||    
T  38606947 tgtggtcacgcaaaccatatatgtagttaactgaaattttggagagttgtacaaaggggtgtacacattaag 38607018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 40502226 - 40502172
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt 321  Q
    |||||| ||||||||||| ||||| |||||||||| ||| |||||||||||||||    
T  40502226 ccaaatatatggtctgtgtgaccacattttttaaggtgcgtgaccactatttttt 40502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 15233341 - 15233398
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||||| || ||||||||  |||||| ||||||||||||||| |||||||||    
T  15233341 tgtggtcacacaaactatatatttaattaactaaaatttttcagagtggtacaaaggg 15233398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 6809920 - 6809964
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcaga 494  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  6809920 tgtggtcacacatactatatatttgattaactgaaattttccaga 6809964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 26914677 - 26914613
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtaca 514  Q
    |||| ||||||| | ||||||||| |||| || |||||||||||||| || ||||||||||||||    
T  26914677 tgtgatcacacaaatcatatatttagttagcttaaatttttcagagtaatgcaaagggatgtaca 26914613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 33286207 - 33286131
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| || ||||||||||||||||| | || ||||| |||| | |||||| || ||||||||||||| ||||    
T  33286207 tgtggtcacgcagaccatatatttggttaattaaatttttttagaggggtacaaatgggtgtacacattaagggtgt 33286131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 40502438 - 40502382
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| ||||| |||||||||| ||  |||||||||||||||||    
T  40502438 ccaaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattttttca 40502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 5321973 - 5321939
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||| |||||||||||||||    
T  5321973 aaatagtggtcacgcaactaaaaaaatgtggtcac 5321939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 516
Target Start/End: Complemental strand, 5573766 - 5573704
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacaca 516  Q
    |||||| ||| |||||||||||||||||||||| ||  ||| ||||||||| || ||||||||    
T  5573766 gtcacatatatcatatatttggttaactgaaatgttcgagaatgatacaaaagggtgtacaca 5573704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 320
Target Start/End: Original strand, 15233138 - 15233235
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    |||||||||||| | ||| ||| || | ||||||||||||||||| ||||| |||||||| || || || | ||||| |||| | ||||||||||||||    
T  15233138 ttaatgtgtacatctcttcgtaccaatctgaaaaatttcagttaatcaaatatatggtctctgcgatcaca-tttttcagttacgtgaccactattttt 15233235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 15714680 - 15714626
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||| | | ||||||||| | ||||||||||||||||||||| ||||||    
T  15714680 tgtggtcacataaatcatatatttagctaactgaaatttttcagagtggtacaaa 15714626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 29367244 - 29367147
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttt 319  Q
    ||||||||||||||| ||| |||||||| |  ||||||| | ||||| |||| |||||||| ||  |||||||||||| | |||  |||||||||||||    
T  29367244 cttaatgtgtacacccctt-gtatcactcttgaaaattttaattaactaaatatatggtctatgtaaccatattttttcaattgtgtgaccactatttt 29367147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 28700240 - 28700183
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatc 383  Q
    |||||||||||||||||| | |||||||| |||||||  |||||||| ||| ||||||    
T  28700240 atttatttggttaactaagtagaaaaataatggtcacttgcattttaattgtgtgatc 28700183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 33286136 - 33286229
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccact 314  Q
    |||||||||||||||  |||||| | || | ||||| || | |||||||||| ||||||||| | ||||| ||||||| | |||| ||||||||    
T  33286136 cttaatgtgtacacccatttgtacccctctaaaaaaatttaattaaccaaatatatggtctgcgtgaccacattttttcaattgcgtgaccact 33286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 24919498 - 24919442
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| |||||||||||  |||| |||||||||| ||| ||| |||||||||||||    
T  24919498 ccaaatatatggtctgtgttaccacattttttaagatgcgtgagcactattttttca 24919442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 24920134 - 24920078
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| |||| | |||| ||||| |||||||||| ||| |||||||||||||||||    
T  24920134 ccaaatatatgttatgtgtgaccacattttttaaggtgcgtgaccactattttttca 24920078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 1400670 - 1400900
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||| ||||||||||| | ||||||||||||||  |||||| || | ||||||||||||||||||||||| |||||| |||| ||||| |||||||||||    
T  1400670 caataataggtagacacccttaatgtgtacacccttttgtaccaatctgaaaaatttcagttaaccaaatatatggtatgtgtgaccacattttttaagt 1400769  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| |||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||| || |||||||||||||||||    
T  1400770 tgcgtgaccactatttttccataatttatttggttaactaagtggaaaaatagtgatcacgcgcatttttgttgtgtgaccacatttttcagcttctaaa 1400869  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||| ||||||||||||||    
T  1400870 tagtggtcacgcaactg-aaaaatgtggtcac 1400900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 204 - 430
Target Start/End: Original strand, 28527220 - 28527445
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||| |||    
T  28527220 caatgataggtagacacccttaat-tgtacacccctttgtaccactttgaaaaatttcagctaaccaaatatatggtctgtgtgaccacatttttttagt 28527318  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| |||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||  | ||||| |||||||||||    
T  28527319 tgcgtgaccactatttttccagaatttatttggttaactaattggaaaaatagtggtcacacgcatgttagtt-cgtgacaacattttccagcttctaaa 28527417  T
Q  403 tagtggtcacgcaactgaaaaaatgtgg 430  Q
    |  ||||||||||||| |||||||||||    
T  28527418 ttatggtcacgcaactaaaaaaatgtgg 28527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 30905947 - 30906178
Alignment:
Q  204 caatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| |||||||||||||| | ||||||| || | |||||| ||| ||||||||| || ||| ||||||| ||||| |||| || |||    
T  30905947 caatgataggtagacactcttaatgtgtacatccctttgtaacattctgaaaatttttagttaaccagatatattgtctgtgtgaccacatttatttagt 30906046  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||  |||||||||| ||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||    
T  30906047 tgtgtgaccactatgtttccataatttatttgcttaactaagtggaaaaatagtggtcacgcgcattttagttgcgtgaccacatttttcagcatttaaa 30906146  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||| ||||||||||  ||||||||    
T  30906147 tagtggtcacgaaactgaaaaatggtggtcac 30906178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 259 - 434
Target Start/End: Complemental strand, 43900685 - 43900510
Alignment:
Q  259 tcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtgg 358  Q
    |||||||||||||| |||| | |||| || || ||||||| | |||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  43900685 tcagttaaccaaatatatgatttgtgtgatcacatttttttaattgcgtgacccctattttttcagaatttatttggttaactaaatagaaaaatagtgg 43900586  T
Q  359 tcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  43900585 tcacgtgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacacaactgaaaaaatgtgatcac 43900510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 221 - 403
Target Start/End: Complemental strand, 33667510 - 33667328
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    |||||| |||||||   |||||| |||| |||||||||| |||||||||||| |||||| |||  || || |||||||||||||| ||||||||||||||    
T  33667510 cttaatatgtacactcttttgtaccactctgaaaaattttagttaaccaaatatatggtatgtatgaacacattttttaagttgcgtgaccactattttt 33667411  T
Q  321 tcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    ||| ||| ||||||||||||||| ||||||||||||||| |||| ||||||| |||||||| || |||||||| |||||||||    
T  33667410 tcagaatatatttggttaactaagtggaaaaatagtggttacgcacattttaattgcgtgaccacatttttcaacttctaaat 33667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 221 - 433
Target Start/End: Complemental strand, 45306160 - 45305950
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||||   ||| ||||| | | |||||||| ||| || ||||| |||| | |||| ||||| ||||||| ||||   ||| || |||||||    
T  45306160 cttaatgtgtacactcatttatatcattctaaaaaatttaagt-aatcaaatatatgatatgtgtgaccacatttttttagttatgtgatcaatattttt 45306062  T
Q  321 tcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactga 420  Q
    | | |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||  || |||||||||||| ||||| ||||||||||||||||    
T  45306061 ttagaatttattcggttaactaagtggaaaaatagtggtcacgcacattttagttgcgtggccacatttttcagcttttaaat-gtggtcacgcaactga 45305963  T
Q  421 aaaaatgtggtca 433  Q
    |||||| ||||||    
T  45305962 aaaaatatggtca 45305950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 434
Target Start/End: Original strand, 7378456 - 7378594
Alignment:
Q  293 ttttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttc 392  Q
    |||||| |||||| |||| |||||||||| |||||||| | |||||| ||| ||||| |||||||||||| | |||||||||||||| | |||||||||     
T  7378456 tttttttagttgcgtgactactatttttttaaaatttaat-ggttaattaagtggaataatagtggtcacacacattttagttgcgtcaccatattttt- 7378553  T
Q  393 agcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||| ||||| |||||||||||||||| |||||||    
T  7378554 agcttctaaat-gtggttacgcaactgaaaaaatatggtcac 7378594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 1400759 - 1400683
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||| ||||    
T  1400759 tgtggtcacacataccatatatttggttaactgaaatttttcagattggtacaaaagggtgtacacattaagggtgt 1400683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 30906171 - 30906240
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  30906171 gtggtcacgcagaccatatatttggttaactgaaatttttcagagtggtacaaaagggtgtacacattaa 30906240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 41212430 - 41212506
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||| ||||    
T  41212430 tgtggtcacacagaccatatatttggttaacttaaatttttcagagtggtacaaaggggtatacatattaagggtgt 41212506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 28527308 - 28527244
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtaca 514  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  28527308 tgtggtcacacagaccatatatttggttagctgaaatttttcaaagtggtacaaaggggtgtaca 28527244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 30906036 - 30905960
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| || |||||| ||||||||| ||| |||||||| || ||||||||||||||||||||||| ||||    
T  30906036 tgtggtcacacagacaatatatctggttaactaaaaattttcagaatgttacaaagggatgtacacattaagagtgt 30905960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 30906240 - 30906144
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||  |||||| |||| ||||||||||||||||||||||| ||||||||| | |||||   ||||| |||| | ||||||||||||    
T  30906240 ttaatgtgtacacccttttgtaccactctgaaaaatttcagttaaccaaatatatggtctgcgtgaccaccatttttcagtttcgtgaccactattt 30906144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 41212501 - 41212423
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta 299  Q
    |||||| |||| ||| ||||||| |||| |||||||||| |||||||||||| ||||||||||| ||||| ||||||||    
T  41212501 cttaatatgtatacccctttgtaccactctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatttttta 41212423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 33667439 - 33667515
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||| |||||| |  |||||| |||||| ||||    
T  33667439 tgtgttcatacataccatatatttggttaactaaaatttttcagagtggtacaaaagagtgtacatattaagggtgt 33667515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 45305886 - 45305978
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccac 313  Q
    |||||| |||||||  ||||||| |||| | ||||||||||||||| ||||| ||| ||||||  ||||||||||||| |||||| |||||||    
T  45305886 cttaatatgtacactcctttgtaccactctaaaaaatttcagttaatcaaatatatagtctgtatgaccatattttttcagttgcgtgaccac 45305978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 34175129 - 34175064
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||| | ||||||||| ||||| ||||| |||||||| | |||||||||||||||||||||||    
T  34175129 tcacacaaatcatatatttagttaattgaaaattttcagaataatacaaagggatgtacacattaa 34175064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 33667328 - 33667252
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| |||||| |  ||||||||||| |||||||| ||||    
T  33667328 tgtggtcatacaaaccatatatttggttaattgaatttttttagagtggtgtaaagggatgtagacattaagggtgt 33667252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 7378627 - 7378573
Alignment:
Q  251 gaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgc 305  Q
    ||||||||||||||||| |||| |||||| |||| ||||||||||||| ||||||    
T  7378627 gaaaaatttcagttaacaaaatatatggtttgtgtgaccatattttttcagttgc 7378573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 34175209 - 34175155
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtg 380  Q
    |||||||||||||||||| |||||||||||  ||||| | |||||||||||||||    
T  34175209 atttatttggttaactaagtggaaaaatagcagtcacacacattttagttgcgtg 34175155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 526
Target Start/End: Complemental strand, 45305955 - 45305881
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||| ||| || ||||||||| ||||||||||||||| |||||| ||||||||  |||||| |||||| ||||    
T  45305955 tggtcatacagactatatatttgattaactgaaattttttagagtggtacaaaggagtgtacatattaagggtgt 45305881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 520
Target Start/End: Original strand, 7378588 - 7378656
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| ||||||||||| ||||||||||||||||| || || | |||| ||||| || ||||||    
T  7378588 tggtcacacaaaccatatattttgttaactgaaatttttctgaatggtgcaaaaggatggacgcattaa 7378656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 1400785 - 1400751
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||| |||||||||||||||    
T  1400785 aaatagtggtcacgcaacttaaaaaatgtggtcac 1400751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Complemental strand, 28527334 - 28527300
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||| |||||||||||||||    
T  28527334 aaatagtggtcacgcaactaaaaaaatgtggtcac 28527300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 43900518 - 43900448
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||| ||||||| ||||||||||| |||| ||||||||||  |||||| ||||||  ||| ||||||||||    
T  43900518 tgtgatcacacagaccatatatttagttacctgaaattttcgagagtggtacaaaatgatctacacattaa 43900448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 43900479 - 43900544
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||||||| |||| |||| ||||||||||| || || ||||||| |||||  ||||||||||||    
T  43900479 aaaatttcaggtaactaaatatatggtctgtgtgatcacattttttcagttgtgtgaccactattt 43900544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 205 - 435
Target Start/End: Complemental strand, 19280409 - 19280179
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||||||| | ||||||||||||||  |||||| |||| |||||| ||| |||||| ||||| ||||||||||| ||| | |||||||||||     
T  19280409 aatgataggtagacacccttaatgtgtacacccgtttgtaccactctgaaaatttttagttaatcaaatatatggtctgtgtgacaacattttttaagtg 19280310  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |  ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| || |||||||| ||||||||     
T  19280309 gtgtgaccactaatttttcaaaatttatttggttaactaagtgg-aaaatagtggtcacgcgaattttagttgcgtgaccacatttttcaacttctaaac 19280211  T
Q  404 agtggtcacgcaactgaaaaaatgtggtcact 435  Q
    |||||||||||| |||||||||||||||||||    
T  19280210 agtggtcacgcatctgaaaaaatgtggtcact 19280179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 220 - 431
Target Start/End: Complemental strand, 22432526 - 22432315
Alignment:
Q  220 tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttt 319  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||| || ||||| ||||||||||| ||| | ||||||| ||||||||||||||||||||    
T  22432526 tcttaatgtgtacacccttttgtagcactttgaaaaatttgagtaaatcaaatatatggtctgtgtgactacatttttttagttgcatgaccactatttt 22432427  T
Q  320 ttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactg 419  Q
    |||| |||||||||||| |||||  |||||||||||||| ||| |||||||||||||  ||| || |||||||||||| |||||||||| ||||||||||    
T  22432426 ttcataatttatttggtcaactatgtggaaaaatagtggacacacgcattttagttgattgaccacatttttcagcttttaaatagtggacacgcaactg 22432327  T
Q  420 aaaaaatgtggt 431  Q
    ||||||| ||||    
T  22432326 aaaaaatatggt 22432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 203 - 433
Target Start/End: Original strand, 42637854 - 42638082
Alignment:
Q  203 ccaatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaag 301  Q
    ||||| ||||||||||| | |||||||| ||| | ||||||| ||||  ||||||||||| |||||||||| |||  | |||| ||||  || ||||| |    
T  42637854 ccaataataggtagacacccttaatgtgcacatccctttgtaccact--gaaaaatttcaattaaccaaatatattatttgtgtgaccgcatatttta-g 42637950  T
Q  302 ttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaa 401  Q
    |||  ||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  42637951 ttgtctgaccactattttttcagaatttatttggttaactaagttgaaaaatagtggttacgcgcattttagttgcgtgaccacatttttcagcttctaa 42638050  T
Q  402 atagtggtcacgcaactgaaaaaatgtggtca 433  Q
    ||||||||||||||||||||||||||||||||    
T  42638051 atagtggtcacgcaactgaaaaaatgtggtca 42638082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 204 - 434
Target Start/End: Complemental strand, 3823864 - 3823633
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| | ||||| ||| ||||  ||||||  |||  |||||||| ||||||||||||| ||| ||||||| |||||  ||||||| ||    
T  3823864 caatgataggtagacacccttaatatgttcacccgtttgtactactcagaaaaattccagttaaccaaatatattgtctgtgtgaccacgtttttta-gt 3823766  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatattttt--cagcttcta 400  Q
    ||| |||||||||||||| || ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||  |||||| ||    
T  3823765 tgcgtgaccactatttttccataatttatttggttaactaagtggaaaaa-agtggtcacacgcattttagttgcgtgaccatatttttttcagcttata 3823667  T
Q  401 aatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||| ||||||||||||||||    
T  3823666 aatagtggtcacgcaacagaaaaaatgtggtcac 3823633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 232 - 416
Target Start/End: Original strand, 4169033 - 4169214
Alignment:
Q  232 caccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttat 331  Q
    |||| |||||||  ||| |||||||||||||||||||||   |||||| || | ||||  ||||||| ||||||||||| |||||||||||| |||||||    
T  4169033 cacctctttgtactactctgaaaaatttcagttaaccaa---tatggtatgcgtgacctcattttttcagttgcatgactactattttttcagaatttat 4169129  T
Q  332 ttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaa 416  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||||||||||||||||    
T  4169130 ttggttaactaaatggaaaaatagtggtcacgcacattttagttgcgttaccacatttttcagcttctaaatagtggtcacgcaa 4169214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 204 - 429
Target Start/End: Complemental strand, 31545829 - 31545603
Alignment:
Q  204 caatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||| ||||||||||| | ||||| |||||| |  ||||||||||| ||||||||||||| ||||| ||| |||||||| || ||||| ||||||| |||    
T  31545829 caattataggtagacaattttaatatgtacatctttttgtatcactctgaaaaatttcaggtaacctaatatatggtctatgtgaccacatttttttagt 31545730  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||  |||||||||||||| || ||||||||| ||||||||| | ||||||||||||||| || ||||||||||| |||| || |||||||||||||||||    
T  31545729 tgtgtgaccactatttttccagaatttattttgttaactaagtagaaaaatagtggtcatgcacattttagttgtgtgaccacatttttcagcttctaaa 31545630  T
Q  403 tagtggtcacgcaactgaaaaaatgtg 429  Q
    ||||||| || ||||||||||||||||    
T  31545629 tagtggttactcaactgaaaaaatgtg 31545603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 251 - 434
Target Start/End: Complemental strand, 3786126 - 3785944
Alignment:
Q  251 gaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaa 350  Q
    |||||||| ||||||||||||| ||| ||||||| |||||  ||||||| ||||| |||||||||||||| || ||||||||||||||||||| ||||||    
T  3786126 gaaaaattccagttaaccaaatatattgtctgtgtgaccacgtttttta-gttgcgtgaccactatttttccataatttatttggttaactaagtggaaa 3786028  T
Q  351 aatagtggtcacgcgcattttagttgcgtgatcata-tttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    || |||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  3786027 aa-agtggtcacgcgcattttagttgcgtgaccatattttttcagcttataaatagtggtcacgtaacagaaaaaatgtggtcac 3785944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 230 - 423
Target Start/End: Original strand, 1705593 - 1705786
Alignment:
Q  230 tacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaattt 329  Q
    |||||| |||| || |||| |||||||||| |||| || |||| |||||| |||| ||  ||||||||| ||||| |||||||||| |||| || || ||    
T  1705593 tacacccctttctaccactctgaaaaatttaagtttactaaatatatggtttgtgtgattatatttttttagttgtatgaccactagttttccagaaatt 1705692  T
Q  330 atttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaa 423  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  1705693 atttggttaactaaggggaaaaatagtggtcacgcgcattttagttgcatgaccatatttttcagcttctaaatagtggtcacgcaactaaaaa 1705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 204 - 434
Target Start/End: Complemental strand, 5342089 - 5341858
Alignment:
Q  204 caatgataggtagacatct-taatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    ||||||||||||||||||  ||||| ||||||| |||||||  ||| ||||||||||||||||| | ||| ||||||||||| ||||| ||||||| |||    
T  5342089 caatgataggtagacatccctaatgcgtacacccctttgtacgactctgaaaaatttcagttaatcgaatatatggtctgtgtgaccacatttttttagt 5341990  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||  | |||| ||| |||||| ||||||||||||||||||| |||||||||||||||||   | ||||||||||  ||| || |||||||| ||||||||    
T  5341989 tgtgtaaccattatgttttcagaatttatttggttaactaagtggaaaaatagtggtcatatgtattttagttgtatgaccacatttttcaacttctaaa 5341890  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||| || ||||||| |||||||    
T  5341889 tagtggtcacgcagctaaaaaaatatggtcac 5341858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 26308571 - 26308743
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggtt 337  Q
    |||||||||||||||||||| ||||||||| |||| |||||| |||| ||||| ||| ||| |||||  ||||||||| |||| || |||||||||||||    
T  26308571 tttgtatcactttgaaaaatatcagttaactaaatatatggtttgtgtgaccacattgttttagttgtgtgaccactaattttccagaatttatttggtt 26308670  T
Q  338 aactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtc 410  Q
    || ||| |||||||||||||||||||||||||||| |||||||| || ||| |||||||||||||||||||||    
T  26308671 aagtaagtggaaaaatagtggtcacgcgcattttaattgcgtgaccacattattcagcttctaaatagtggtc 26308743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 248 - 434
Target Start/End: Complemental strand, 44080424 - 44080238
Alignment:
Q  248 tttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatgg 347  Q
    ||||||||||||||||||| |||   ||| |||||||  |||| ||||||| |||||   ||||||||||||| |||||||| ||||||||||||| |||    
T  44080424 tttgaaaaatttcagttaatcaaggatatagtctgtgttaccacatttttttagttgtgcgaccactatttttccaaaatttttttggttaactaagtgg 44080325  T
Q  348 aaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactg-aaaaaatgtggtcac 434  Q
    ||||||||||| ||||| ||||||||||  |||| || |||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  44080324 aaaaatagtgggcacgcacattttagtt-tgtgaccacatttttcaacttctaaatagtggtcacgcaactgcaaaaaatatggtcac 44080238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 377
Target Start/End: Complemental strand, 11501483 - 11501309
Alignment:
Q  204 caatgataggtagacat-cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    ||||||||||| ||||  ||||||||||||||  |||| || ||||||  ||||||| |||||||||||| |||| |||||| ||||  | ||||| |||    
T  11501483 caatgataggttgacacacttaatgtgtacactcctttataccactttagaaaatttaagttaaccaaatatatgatctgtgtgaccgcagttttttagt 11501384  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgc 377  Q
    ||| | | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  11501383 tgcgttagcactatttttttaaaatttatttggttaactaattggaaaaatagtggtcacgcacattttagttgc 11501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 204 - 416
Target Start/End: Complemental strand, 42481511 - 42481300
Alignment:
Q  204 caatgataggtagacatctt--aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaag 301  Q
    ||||||||| ||||||||||  |||||||| |||  ||| ||||||| |  |||||   ||||||||| || ||| ||||| |  | || ||||||| ||    
T  42481511 caatgatagatagacatcttttaatgtgtataccattttatatcactctacaaaat---agttaaccagatatatagtctgagtaatcacatttttttag 42481415  T
Q  302 ttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaa 401  Q
    || |||||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||||  ||||||||||| |||| |||||||||||| || |||    
T  42481414 ttacatgaccattattttttcagaatttatttggttaactaagtagaaaaataatggtcacgtacattttagttgtgtgaccatatttttcagtttttaa 42481315  T
Q  402 atagtggtcacgcaa 416  Q
    |||||||||||||||    
T  42481314 atagtggtcacgcaa 42481300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 199 - 436
Target Start/End: Complemental strand, 19624523 - 19624286
Alignment:
Q  199 tacaccaatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctg-tgggaccatatttt 296  Q
    |||| ||||||||||| |||||| |||||||||||| | |||||||  ||  |||||| ||| | |||||||||| |||||| || || ||||| |||||    
T  19624523 tacaacaatgataggttgacatccttaatgtgtacatc-ctttgtacaacgctgaaaattttaatttaaccaaatatatggtatgatgcgaccacatttt 19624425  T
Q  297 ttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagct 396  Q
    || |||||  ||||||| |||||| || ||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||  || || ||| ||||    
T  19624424 tttagttgtgtgaccacaatttttccagaatttatgtggttaactaagtggaaaaatagtggtcacgtgcattttagttgggtggccacatattttagct 19624325  T
Q  397 tctaaatagtggtcacgcaactgaaaaaatgtggtcactt 436  Q
    | |||||| ||||||| |||||||| |||| || ||||||    
T  19624324 tataaata-tggtcacacaactgaagaaatatgatcactt 19624286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 13358101 - 13358208
Alignment:
Q  316 ttttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgca 415  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||| |||||| |||    
T  13358101 ttttttcaaaatttatttggttaactatgtggaaaaatagtggtaacgcgcattttaattgtgtgaccatatttttcagcttctaaata-tggtcatgca 13358199  T
Q  416 actgaaaaa 424  Q
    | |||||||    
T  13358200 attgaaaaa 13358208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 379
Target Start/End: Complemental strand, 39126359 - 39126201
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccacta--tttt 319  Q
    |||||||||||||  |||||||| | | |||||||||| |||||||||||| |||| |||||| ||| | ||||||| |||||| |||| ||||  ||||    
T  39126359 ttaatgtgtacacttctttgtattattctgaaaaatttaagttaaccaaatatatgatctgtgtgacaacatttttttagttgcgtgactactatttttt 39126260  T
Q  320 ttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgt 379  Q
    || ||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||    
T  39126259 tttaaaatttatttggttaactaagtggaaaaatagtgatcgcgcgc-ttttagttgcgt 39126201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 430
Target Start/End: Complemental strand, 27707837 - 27707660
Alignment:
Q  252 aaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||| |||||| ||||| |||||||| || |||||||| ||||  |||||||| ||||||||||| || |||||||||||||||  || || ||||    
T  27707837 aaaaatttaagttaatcaaatatatggtctctgtgaccatatatttttggttgcatgtccactatttttccagaatttatttggttaatcaagtgaaaaa 27707738  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtgg 430  Q
    |||||||||| || ||||||||||| | || || |||||| || ||| |||| |||||||| ||| |||||||||||||    
T  27707737 atagtggtcatgcacattttagttgtgcgaccacattttttagtttcaaaat-gtggtcacacaattgaaaaaatgtgg 27707660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 403
Target Start/End: Original strand, 27335291 - 27335479
Alignment:
Q  205 aatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||| ||||||| |||||||||||| ||||||| || | |||||| ||| ||||||||||   |||||| |||| ||||| ||||||| ||||    
T  27335291 aatgataggtaaacatctttaatgtgtacacccctttgtaccattctgaaaattttgagttaaccaataatatggtatgtgtgaccacatttttttagtt 27335390  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    || |||| |||||||           |||||||||||||| ||||||||||||||||||| | |||||||||| |||| || ||||||||||||||||||    
T  27335391 gcgtgacaactattt-----------atttggttaactaagtggaaaaatagtggtcacgtgtattttagttgtgtgaccacatttttcagcttctaaat 27335479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 253 - 429
Target Start/End: Original strand, 34627245 - 34627422
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaa 352  Q
    ||||||| |||||| ||||| ||| || | || |||||||||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||    
T  34627245 aaaatttaagttaatcaaatatatagtttctgtgaccatattttttaagttgcgtgactactatttttttcgaatttatttggttaactaaatggaaaaa 34627344  T
Q  353 tagtggtcacgcgcattttagttgcgtgatcatattttt-cagcttctaaatagtggtcacgcaactgaaaaaatgtg 429  Q
    || |||| ||  | ||||||||||||||| || |||||| | | || |||||||||  |  |||||||||||||||||    
T  34627345 taatggttacatgtattttagttgcgtgaccacatttttccgggttttaaatagtgtccttgcaactgaaaaaatgtg 34627422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 9710728 - 9710849
Alignment:
Q  311 cactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtc 410  Q
    ||||| ||| ||| ||||||||||||||||||| ||||||||||||||||| | | |||| |||||||||| || | |||||||||||||| ||||||||    
T  9710728 cactagtttctcagaatttatttggttaactaagtggaaaaatagtggtcaagtgtattt-agttgcgtgaccacagttttcagcttctaagtagtggtc 9710826  T
Q  411 acgcaactgaaaaaatgtggtca 433  Q
    ||||||| |||||||| ||||||    
T  9710827 acgcaaccgaaaaaatatggtca 9710849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 11509969 - 11509885
Alignment:
Q  350 aaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||||||  |||||||||| |||||||||||||||||    
T  11509969 aaataggggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaataaaggtcacgcaagtgaaaaaatgtggtcac 11509885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 3785881 - 3785978
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||| ||||||| |||| |  |||||||||||||||||| ||||||||||||| ||||| |||||||  ||| | ||||||||||||    
T  3785881 cttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattttatggtctgtgtgaccacattttttctgttacgtgaccactattt 3785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 3823570 - 3823667
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||| ||||||| |||| |  |||||||||||||||||| | ||||||||||| ||||| |||||||  ||||| ||||||||||||    
T  3823570 cttaatgtgtacacccctttgtaccactctcgaaaatttcagttaaccaattatatggtctgtgtgaccacattttttctgttgcgtgaccactattt 3823667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 3823641 - 3823565
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| |||||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||    
T  3823641 tgtggtcacacagaccatataattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaagggtgt 3823565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 463 - 521
Target Start/End: Original strand, 9710850 - 9710908
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  9710850 accatatatttggttaactgaaatttttcagagtggtacaaaggggtgtacatattaag 9710908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 27079453 - 27079380
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaa 326  Q
    |||||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||||||||| ||||||||||||    
T  27079453 aaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaaaa 27079380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 27085250 - 27085177
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaa 326  Q
    |||||||| ||||||||||| ||||||||||| ||||| | ||||| |||||||||||||| ||||||||||||    
T  27085250 aaaatttcggttaaccaaatatatggtctgtgtgaccacaatttttcagttgcatgaccacaattttttcaaaa 27085177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 3785952 - 3785876
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| |||||| | ||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||    
T  3785952 tgtggtcacacagaccataaaattggttaactgaaattttcgagagtggtacaaaggggtgtacacattaagggtgt 3785876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 18733598 - 18733668
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||| || || |||||| ||||||||||||    
T  18733598 tgtggtcacccataccatatatttagttaacttaaatttttcagaatggtataaaggggtgtacacattaa 18733668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 27335379 - 27335309
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||||||||||||  |||||||||| ||| |||||||| || ||||||||| ||||||||||||    
T  27335379 tgtggtcacacataccatattattggttaactcaaaattttcagaatggtacaaaggggtgtacacattaa 27335309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 31545740 - 31545810
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| | |||||||||| ||||| |||||||||||||||||||||||||  |||||||| |||||    
T  31545740 tgtggtcacatagaccatatattaggttacctgaaatttttcagagtgatacaaaaagatgtacatattaa 31545810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 44080175 - 44080273
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt-aagttgcatgaccactattt 318  Q
    |||||||||||||   ||||||| |||| |||| |||||||||||||||||| |||  |||||| |||||||||||||  |||||| ||||||||||||    
T  44080175 cttaatgtgtacatatctttgtaccactctgaacaatttcagttaaccaaatatataatctgtgtgaccatattttttgcagttgcgtgaccactattt 44080273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 519
Target Start/End: Original strand, 5342000 - 5342069
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatta 519  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||  ||||||||| ||||| |||||    
T  5342000 tgtggtcacacagaccatatattcgattaactgaaatttttcagagtcgtacaaaggggtgtacgcatta 5342069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 361
Target Start/End: Complemental strand, 11510148 - 11509989
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta--a 300  Q
    |||||||||||||||||| |||||||||| | | |||||||   || |||||||||||||||||  |||| |||  | |||| |||||||||||||   |    
T  11510148 caatgataggtagacatccttaatgtgtatatc-ctttgtacacctctgaaaaatttcagttaaataaatatataatatgtgtgaccatattttttttta 11510050  T
Q  301 gttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtca 361  Q
    ||||| ||| |||||||||   | ||||||||| ||||||||| || ||||||||||||||    
T  11510049 gttgcgtgagcactattttcctagaatttatttagttaactaattgaaaaaatagtggtca 11509989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 403
Target Start/End: Original strand, 27365008 - 27365085
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||| ||| |||||||||||||||||| || ||||||| |||||||  | ||||||||| ||||||||    
T  27365008 atttatttggttaattaagtggaaaaatagtggtcacacgtattttagctgcgtgactacatttttcagtttctaaat 27365085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 521
Target Start/End: Complemental strand, 44080244 - 44080175
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||| |  |||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  44080244 tggtcacacagattatatatttggttaactgaaattgttcagagtggtacaaagatatgtacacattaag 44080175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 11509893 - 11509817
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| | |  |||||||||||  |||||||||| |||||| ||||||||| ||||||||||||||||||    
T  11509893 tgtggtcacacaaatcgcatatttggttatttgaaatttttaagagtggtacaaaggggtgtacacattaagtgtgt 11509817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 454 - 526
Target Start/End: Original strand, 19280325 - 19280397
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||| |||||||||||| |||||| ||| ||||||||||| |||||| || ||||||||||||| ||||    
T  19280325 gtcacacagaccatatatttgattaactaaaaattttcagagtggtacaaacgggtgtacacattaagggtgt 19280397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 41571904 - 41571828
Alignment:
Q  355 gtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggt 431  Q
    |||||||||  |||||||  || ||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||    
T  41571904 gtggtcacgtacattttaactgtgtgatcacatttttcaacttttaaatagtggtcacgtaactgaaaaaatgtggt 41571828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 526
Target Start/End: Original strand, 1705792 - 1705863
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| ||| |||||||||||||||||||||| | | ||||||| | |||||||||||||||| ||||    
T  1705792 tcacacatatcatgtatttggttaactgaaattttttacaatgatacacaaggatgtacacattaagggtgt 1705863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 9710908 - 9710850
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggt 279  Q
    |||||| |||||||| ||||||| |||| ||||||||||||||||||||||| ||||||    
T  9710908 cttaatatgtacacccctttgtaccactctgaaaaatttcagttaaccaaatatatggt 9710850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 504
Target Start/End: Complemental strand, 26308625 - 26308571
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||    
T  26308625 tgtggtcacacaaaccatatatttagttaactgatatttttcaaagtgatacaaa 26308571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 11501298 - 11501241
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||||| ||||||||||||||||  ||||| ||||||||||| |||||||||    
T  11501298 tgtggtcacacagaccatatatttggttatttgaaaattttcagagtggtacaaaggg 11501241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 23163397 - 23163321
Alignment:
Q  348 aaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaa 425  Q
    ||||||| || ||||| |||||||||||| |||| ||||||||||||| |||| |||||||||| |||||||| ||||    
T  23163397 aaaaataatgatcacgtgcattttagttgtgtgaccatatttttcagc-tctacatagtggtcatgcaactgataaaa 23163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 515
Target Start/End: Original strand, 26308759 - 26308824
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacac 515  Q
    ||||| |||||| |||||||||||| |||||||||| |||||||||| |||||||| | |||||||    
T  26308759 tgtggccacacaaaccatatatttgattaactgaaaattttcagagttatacaaagaggtgtacac 26308824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 403
Target Start/End: Original strand, 27326047 - 27326124
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||| |||||| || ||||||||||||||||||  | ||||||||||||||| || |||||| || ||||||||    
T  27326047 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27326124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 403
Target Start/End: Original strand, 27332284 - 27332361
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||| |||||| || ||||||||||||||||||  | ||||||||||||||| || |||||| || ||||||||    
T  27332284 atttatttagttaaccaactggaaaaatagtggtcacatgtattttagttgcgtgaccacattttttagtttctaaat 27332361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 526
Target Start/End: Original strand, 22432458 - 22432530
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||| |||||||||||| || ||| |||||||||| |||| |||||| || ||||||||||||| ||||    
T  22432458 gtcacacagaccatatatttgatttactcaaatttttcaaagtgctacaaaagggtgtacacattaagagtgt 22432530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 27079301 - 27079380
Alignment:
Q  312 actattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatattttt 391  Q
    |||||||||  | |||||||||| |||||||| |||||||||  |||||||||||||||||| | ||||| || ||||||    
T  27079301 actatttttctataatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt 27079380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 27085098 - 27085177
Alignment:
Q  312 actattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatattttt 391  Q
    |||||||||  | |||||||||| |||||||| |||||||||  |||||||||||||||||| | ||||| || ||||||    
T  27085098 actatttttctataatttatttgattaactaagtggaaaaatgatggtcacgcgcattttagctacgtgaccacattttt 27085177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 520
Target Start/End: Original strand, 39126293 - 39126359
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||| | ||||||||||||||||| |||||||||||| | ||||||||   ||||||||||||    
T  39126293 gtcacacagatcatatatttggttaacttaaatttttcagaataatacaaagaagtgtacacattaa 39126359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 526
Target Start/End: Complemental strand, 42637939 - 42637868
Alignment:
Q  453 ggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| |  |||||||||||||| |||||||||||  |||| ||||||||||||| ||||||||| ||||    
T  42637939 ggtcacacaaataatatatttggttaattgaaatttttc--agtggtacaaagggatgtgcacattaagggtgt 42637868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 526
Target Start/End: Original strand, 11501397 - 11501470
Alignment:
Q  453 ggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| | ||||||||||||||||| |||||||  | |||| || |||||  ||||||||||||||||||    
T  11501397 ggtcacacagatcatatatttggttaacttaaattttctaaagtggtataaaggagtgtacacattaagtgtgt 11501470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 518
Target Start/End: Original strand, 27040706 - 27040774
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatt 518  Q
    |||| ||||||| | |||||||||||||||| ||||||||  |||||  |||||||| |||||||||||    
T  27040706 tgtgatcacacagatcatatatttggttaaccgaaattttctagagtagtacaaaggaatgtacacatt 27040774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 34164324 - 34164380
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| ||||| ||||| |||| ||| |||||||||||||||||    
T  34164324 ccaaatatatggtctgtgtgaccacattttataaggtgcgtgaccactattttttca 34164380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 526
Target Start/End: Original strand, 3823776 - 3823851
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||||| || ||||||||||||||||| |||||||| ||||  |||||| || || ||| |||||| ||||    
T  3823776 gtggtcacacagacaatatatttggttaactggaatttttctgagtagtacaaacgggtgaacatattaagggtgt 3823851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 27079414 - 27079453
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttt 489  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  27079414 tgtggtcacacagaccatatatttggttaaccgaaatttt 27079453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 27085211 - 27085250
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttt 489  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  27085211 tgtggtcacacagaccatatatttggttaaccgaaatttt 27085250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 496
Target Start/End: Original strand, 33488363 - 33488406
Alignment:
Q  453 ggtcacacataccatatatttggttaactgaaatttttcagagt 496  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  33488363 ggtcatacataccatatatttagttaacttaaatttttcagagt 33488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 1705858 - 1705763
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||| |  | ||||||| | | |||||||||||||||||||||  ||| | |||| || |||||||||  |||||| ||||||||||||    
T  1705858 cttaatgtgtacatccttgtgtatcattgtaaaaaatttcagttaaccaaatacatgatatgtgtgatcatattttt--agttgcgtgaccactattt 1705763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 497
Target Start/End: Original strand, 3786086 - 3786132
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtg 497  Q
    ||||||||||| || ||||||||||||||||| |||||||| |||||    
T  3786086 gtggtcacacagacaatatatttggttaactggaatttttctgagtg 3786132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 18733576 - 18733538
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgc 364  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  18733576 atttatttggttaactaagtggaaaaatagtgctcacgc 18733538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 18733694 - 18733573
Alignment:
Q  197 aatacaccaatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattt 295  Q
    |||||| |||| ||| ||||||| ||| |||||||||||| |||| || || | |||||||||| ||||||| |||| |||||| || | ||||| ||||    
T  18733694 aatacaacaattatatgtagacacctttaatgtgtacacccctttataccattctgaaaaatttaagttaactaaatatatggtatgggtgaccacattt 18733595  T
Q  296 tttaagttgcatgaccactattt 318  Q
     || |||||| |||| |||||||    
T  18733594 ctt-agttgcgtgacaactattt 18733573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 19280119 - 19280210
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccact 314  Q
    ||||| ||||||||| ||||||| ||||   ||| |||| |||||||||||| ||||||||| | ||||| ||||||| || ||| ||||||||    
T  19280119 cttaaagtgtacacccctttgtaccacta--aaatattttagttaaccaaatatatggtctgagtgaccacattttttcagatgcgtgaccact 19280210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 1705650 - 1705593
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgta 512  Q
    ||||||| ||||||||||| || |||| ||||||||||||||| || |||||| ||||    
T  1705650 tcacacaaaccatatatttagtaaacttaaatttttcagagtggtagaaaggggtgta 1705593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 521
Target Start/End: Original strand, 11510062 - 11510130
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||||||||  ||||||||  ||||||||||||||||||||   |||||| |||| |||||||||||    
T  11510062 tggtcacacatattatatatttatttaactgaaatttttcagaggtgtacaaa-ggatatacacattaag 11510130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 19280188 - 19280114
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| || ||||||||||||||||||| |||| |||   |||| ||||||||| ||||||| ||||| ||||    
T  19280188 tgtggtcactcagaccatatatttggttaactaaaatattt--tagtggtacaaaggggtgtacactttaagggtgt 19280114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 521
Target Start/End: Original strand, 19624440 - 19624500
Alignment:
Q  460 cataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||||||||| | ||| ||||||| ||  |||||| ||||||||||||||||    
T  19624440 cataccatatatttggttaaattaaaattttcagcgttgtacaaa-ggatgtacacattaag 19624500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 42638114 - 42638049
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||| |||| |||||| | |  ||||| ||||||| |||||| ||||||||||||    
T  42638114 aaaatttcagttaactaaatatatggtatatatgaccacattttttcagttgcgtgaccactattt 42638049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 11501243 - 11501303
Alignment:
Q  237 ctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttt 297  Q
    ||||||| |||| |||||| |||||  ||||||||| ||||||||||| ||||| ||||||    
T  11501243 ctttgtaccactctgaaaattttcaaataaccaaatatatggtctgtgtgaccacattttt 11501303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 507
Target Start/End: Original strand, 13359005 - 13359057
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    ||||||| |||||||||||  |||||||||||||| ||||||| |||| ||||    
T  13359005 tcacacagaccatatatttaattaactgaaattttccagagtggtacagaggg 13359057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 31545498 - 31545446
Alignment:
Q  468 atatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||| ||||||||||||||  |||||  ||||||||||| ||||||||||    
T  31545498 atatttgattaactgaaattttcgagagtagtacaaagggatatacacattaa 31545446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 2e-62; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 237 - 434
Target Start/End: Original strand, 10304631 - 10304827
Alignment:
Q  237 ctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggt 336  Q
    ||||||| |||| | ||||||||||||||||||||| ||||||||||| ||||| | ||||||| |||| |||||||| ||||| || ||||||||||||    
T  10304631 ctttgtaccactctaaaaaatttcagttaaccaaatatatggtctgtgtgaccacactttttaa-ttgcgtgaccactttttttccagaatttatttggt 10304729  T
Q  337 taactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||| || |||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10304730 taactaagtgaaaaaatagtggtcacgcgcattttagttgcgtgaccgtatttttctgcttctaaatagtgatcacgcaactgaaaaaatgtggtcac 10304827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 253 - 434
Target Start/End: Original strand, 33814961 - 33815143
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt-caaaatttatttggttaactaaatggaaaa 351  Q
    ||||||| |||||| ||||| |||||| |||  |||||||| | || ||||||  ||||||| |||||| || ||||||||||||||||||| |||||||    
T  33814961 aaaatttaagttaatcaaatatatggtttgtatgaccatatctgtttagttgcgcgaccactttttttttcagaatttatttggttaactaagtggaaaa 33815060  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    || ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33815061 atggtggtcacgcgcattttagttgcgtgaccacatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 33815143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 209 - 424
Target Start/End: Complemental strand, 22608571 - 22608352
Alignment:
Q  209 ataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaattt---atggtctgtgggaccatattttttaagttg 304  Q
    ||||||||||| | ||||| |||||||| |||||||||| |||||||| |||||||||||||||| |   ||| |||||| ||||||||| ||| |||||    
T  22608571 ataggtagacacttttaatatgtacacccctttgtatcattttgaaaattttcagttaaccaaatattatatgatctgtgtgaccatattgttttagttg 22608472  T
Q  305 catgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaata 404  Q
    | ||||||||| ||||||| || ||||||| |||||||| |  |||||||||||||| || |||||||||||| ||| || |||||||||||||||||||    
T  22608471 cgtgaccactaatttttcagaaattatttgattaactaattcaaaaaatagtggtcatgcacattttagttgcatgaccacatttttcagcttctaaata 22608372  T
Q  405 gtggtcacgcaactgaaaaa 424  Q
    ||||||||||||||||||||    
T  22608371 gtggtcacgcaactgaaaaa 22608352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 238 - 434
Target Start/End: Complemental strand, 3222610 - 3222413
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaa-aatttatttggt 336  Q
    ||||||||||| | |||||  | |||||| ||||| ||||||||||| ||||| ||||||  |||| | |||||||||| ||||| | ||||||||||||    
T  3222610 tttgtatcactctaaaaaagattagttaatcaaatatatggtctgtgtgaccacatttttctagttacgtgaccactatattttccagaatttatttggt 3222511  T
Q  337 taactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||| |||||||||||||||||||  |||||||||||||||| |  |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  3222510 taactaagtggaaaaatagtggtcacgtacattttagttgcgtgaccgcatttttcagcatttaaatagtggtcacgcaactgaaaaaatgtggtcac 3222413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 138661 - 138820
Alignment:
Q  252 aaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||| |||||||||||| ||||||||||| | ||| ||||| | |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||    
T  138661 aaaaattt-agttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaa 138759  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcac 412  Q
    ||||||||| ||| || ||||||||||||| || |||||||||||||||||||||||||||    
T  138760 atagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 146682 - 146841
Alignment:
Q  252 aaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||| |||||||||||| ||||||||||| | ||| ||||| | |||||| ||||||||||||||||| ||||||||||||| ||||| |||||||    
T  146682 aaaaattt-agttaaccaaatatatggtctgtgtggccacattttcttagttgcgtgaccactattttttcagaatttatttggttgactaagtggaaaa 146780  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcac 412  Q
    ||||||||| ||| || ||||||||||||| || |||||||||||||||||||||||||||    
T  146781 atagtggtcgcgcacaatttagttgcgtgaccacatttttcagcttctaaatagtggtcac 146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 204 - 411
Target Start/End: Complemental strand, 9068621 - 9068411
Alignment:
Q  204 caatgataggtagacatc----ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta 299  Q
    ||||||| ||||||||||    ||||||||||||||  |||||| |||| |||||||||| |||||| ||||| |||||| |||| ||||| |||||||     
T  9068621 caatgatcggtagacatccttattaatgtgtacacccttttgtaccactctgaaaaattttagttaatcaaatatatggtatgtgtgaccacattttttt 9068522  T
Q  300 agttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 399  Q
    |||||| |||||||||||||| || || |||||| ||| ||||| ||||||||||||  ||||||||||||||| || |||| || |||||||||||| |    
T  9068521 agttgcgtgaccactatttttccagaacttattt-gtttactaagtggaaaaatagtaatcacgcgcattttagatgtgtgaccacatttttcagctttt 9068423  T
Q  400 aaatagtggtca 411  Q
    ||||||||||||    
T  9068422 aaatagtggtca 9068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 404
Target Start/End: Complemental strand, 2835175 - 2834974
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| | |||||||||| | |  |||||| |||| |||||||||| |||||||||||| ||   |||||| ||||| ||||||| |||    
T  2835175 caatgataggtagacagccttaatgtgtatatcaatttgtaccactctgaaaaatttaagttaaccaaatataccatctgtgtgaccacatttttttagt 2835076  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||  | |||||||||||| || ||||||||| |||| |||| |||||||||| |||||||||| ||||||||||| ||| ||||||||||||||| ||||    
T  2835075 tgtgtaaccactatttttccataatttatttagttagctaagtggaaaaataatggtcacgcgtattttagttgcatgaccatatttttcagcttttaaa 2834976  T
Q  403 ta 404  Q
    ||    
T  2834975 ta 2834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 208 - 364
Target Start/End: Original strand, 2430507 - 2430664
Alignment:
Q  208 gataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaa-tttcagttaaccaaatttatggtctgtgggaccatattttttaagttgc 305  Q
    |||||||||||| | ||||||||||||   ||||||| || | ||||||| ||||||||||| |||| |||| |||||| |||||| ||||||| |||||    
T  2430507 gataggtagacacccttaatgtgtacattcctttgtaccattctgaaaaaatttcagttaactaaatatatgatctgtgtgaccatttttttta-gttgc 2430605  T
Q  306 atgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgc 364  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2430606 atgaccactattttttcagaatttatttggttaactaagtggaaaaatagtggtcacgc 2430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 207 - 423
Target Start/End: Original strand, 3620659 - 3620876
Alignment:
Q  207 tgataggtagacat-cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgc 305  Q
    |||||||||||||| ||||||||||||| |  ||| || |||| ||||   ||| |||||| ||||| |||||| |||| ||| | | || || | ||||    
T  3620659 tgataggtagacattcttaatgtgtacatccatttataccactctgaatttttttagttaaacaaatatatggtttgtgtgactacaattctttacttgc 3620758  T
Q  306 atgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatag 405  Q
      |||||||||||||||| ||||||||||||||||||| || |||||||||||||||    |||||||||| ||||||| |||||||| |||||||||||    
T  3620759 gcgaccactattttttcagaatttatttggttaactaagtgaaaaaatagtggtcacatatattttagttgtgtgatcacatttttcaacttctaaatag 3620858  T
Q  406 tggtcacgcaactgaaaa 423  Q
    || |||||| | ||||||    
T  3620859 tgatcacgcgattgaaaa 3620876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 434
Target Start/End: Complemental strand, 23595336 - 23595136
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    |||||| ||||||||  ||||||| ||| | |||||||||| |||||||||| ||| ||||||| ||||| |||||||  ||||  ||||||||| ||||    
T  23595336 cttaatatgtacacccttttgtattactctaaaaaatttcaattaaccaaatatatagtctgtgtgaccacattttttt-gttg--tgaccactaatttt 23595240  T
Q  321 tcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactga 420  Q
    ||| ||||||||| ||||||||| |||||||||||||| ||||||  ||        |||| || ||||||||||||||||||||| ||||| ||||| |    
T  23595239 tcagaatttattttgttaactaagtggaaaaatagtggccacgcg--tt--------gtgaccacatttttcagcttctaaatagttgtcacacaactaa 23595150  T
Q  421 aaaaatgtggtcac 434  Q
    |||||| |||||||    
T  23595149 aaaaatatggtcac 23595136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 20084666 - 20084590
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||||||||||||||||||||||| |||||||||||  || || |||||||||||||||||||| ||||    
T  20084666 tgtggtcacacataccatatatttggttaacttaaatttttcagcatggtataaagggatgtacacattaagggtgt 20084590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 24386335 - 24386411
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||| ||||    
T  24386335 tgtggtcacacagaccatatatttggttaacttaaatttttcagcgtggtataaagggatgtacacattaagggtgt 24386411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 9068529 - 9068599
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||||||    
T  9068529 tgtggtcacacataccatatatttgattaactaaaatttttcagagtggtacaaaagggtgtacacattaa 9068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 22608347 - 22608280
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||| ||||||||||||||||||| |||||||| |||||| ||||||||| |||||||||||||    
T  22608347 gtcacacagaccatatatttggttaactaaaatttttgagagtggtacaaaggggtgtacacattaag 22608280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 30056022 - 30056152
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccata-ttttttaag 301  Q
    |||| ||||||||||| ||| ||||| ||| || |||||||  ||| | ||||||||||||||||||||| |||||||| || ||||| | ||||||  |    
T  30056022 caataataggtagacacctttaatgtatactcccctttgtacaactctaaaaaatttcagttaaccaaatatatggtctatgtgaccacatttttttttg 30056121  T
Q  302 ttgcatgaccactattttttcaaaatttatt 332  Q
    |||| ||||||||||||||||| ||||||||    
T  30056122 ttgcgtgaccactattttttcagaatttatt 30056152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 10304686 - 10304629
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  10304686 tgtggtcacacagaccatatatttggttaactgaaattttttagagtggtacaaaggg 10304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 22608280 - 22608376
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||| ||||||| |||| | |||||||| |||||||||||| ||||||||||| ||| | | ||||| |||||| ||||||||||||    
T  22608280 cttaatgtgtacacccctttgtaccactctcaaaaattttagttaaccaaatatatggtctgtgtgactaca-tttttcagttgcgtgaccactattt 22608376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 11108155 - 11108079
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||  |||||  | |||||||||||||| ||||    
T  11108155 tgtggtcacacagaccatatatttggttaattgaaatttttcagagtagtacaagtgaatgtacacattaagagtgt 11108079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 23595074 - 23595170
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||  ||||||||||| |  ||||||| ||||||| |||| ||||||||||| ||||||||||||| |||||  |||| |||||||    
T  23595074 ttaatgtgtacacccttttgtatcactctcgaaaatttaagttaactaaatatatggtctgtgtgaccatatttttttagttgtgtgacaactattt 23595170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 7915683 - 7915617
Alignment:
Q  455 tcacacataccatatatttggttaactgaaat-ttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||| || ||||||||||||    
T  7915683 tcacacataccacatatttgattaactgaaattttttcagagtgatacaaaagggtgtacacattaa 7915617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 9474718 - 9474622
Alignment:
Q  327 tttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaat 426  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||| || ||||| || |||||| ||||||||       |||||||||||||||||||    
T  9474718 tttatttggttaactaagtgaaaaaatagtggtcacacgcatttta-tttcgtgaccacattttttagcttcta-------gtcacgcaactgaaaaaat 9474627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 3222351 - 3222447
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||||| |||||||| ||| | ||||||||||  ||||||||| |||||| | || ||||| ||||||| |||||| ||||||||||||    
T  3222351 cttaatgtgtacacc-ctttgtattactcttaaaaatttcaaataaccaaatatatggtgtctgtgaccacattttttcagttgcgtgaccactattt 3222447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 323
Target Start/End: Complemental strand, 7915803 - 7915687
Alignment:
Q  207 tgataggtagacat-cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgc 305  Q
    |||||| ||||||| |||||||||||||||   || || |||| ||||||||||||||||| ||||| ||| ||||||| ||||| | ||||| ||||||    
T  7915803 tgatagatagacattcttaatgtgtacaccctcttttaccactctgaaaaatttcagttaatcaaatatatcgtctgtgtgaccacaattttttagttgc 7915704  T
Q  306 atgaccactattttttca 323  Q
     ||||||| |||||||||    
T  7915703 gtgaccac-attttttca 7915687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 3222421 - 3222346
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| | ||||||||||||||||  |||||||||| ||||| |||||||||| ||||||||||||| ||||    
T  3222421 tgtggtcacagacaccatatatttggttatttgaaatttttaagagtaatacaaaggg-tgtacacattaagggtgt 3222346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 452 - 520
Target Start/End: Complemental strand, 23595142 - 23595074
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| ||||||||||| ||||||| |||||||  ||||||||||||| || ||||||||||||    
T  23595142 tggtcacacagaccatatatttagttaacttaaattttcgagagtgatacaaaagggtgtacacattaa 23595074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 526
Target Start/End: Complemental strand, 2430591 - 2430516
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaat-ttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| | ||||||||| |||||||||||| |||||||| || |||||||| |||||||||||||| ||||    
T  2430591 tggtcacacagatcatatatttagttaactgaaattttttcagaatggtacaaaggaatgtacacattaagggtgt 2430516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 7915717 - 7915788
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||| || ||  || |||||||||||||    
T  7915717 tgtggtcacacagacgatatatttgattaactgaaatttttcagagtggtaaaagagggtgtacacattaag 7915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 23595265 - 23595336
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| || |||||||||||||| |||||||||| ||||| ||||||| || |||||| ||||||    
T  23595265 tgtggtcacacagactatatatttggttaattgaaattttttagagtaatacaaaagggtgtacatattaag 23595336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 7706849 - 7706779
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||||   |||||| |||||||||||| || |||||| |||||||||||||||    
T  7706849 tgtggtcacacaaaccatatattatattaactaaaatttttcagaatggtacaaaaggatgtacacattaa 7706779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 7706940 - 7706862
Alignment:
Q  286 gaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgc 364  Q
    ||||| ||||||| |||||| |||| ||||||||| || || |||||||||||  ||| ||||||||||||||||||||    
T  7706940 gaccacatttttttagttgcgtgacaactatttttccagaacttatttggttacttaagtggaaaaatagtggtcacgc 7706862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 24386406 - 24386304
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||| | |||| || |||  |||||||||| |||||||||||| ||||||||||| ||||| || ||||  ||||| ||| ||||| ||||    
T  24386406 cttaatgtgtacatccctttataccacgctgaaaaatttaagttaaccaaatatatggtctgtgtgaccacatattttttgttgcgtgatcactactttt 24386307  T
Q  321 tca 323  Q
    |||    
T  24386306 tca 24386304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 30056111 - 30056041
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||  |||||||||  ||| |||||||    
T  30056111 tgtggtcacatagaccatatatttggttaactgaaattttttagagttgtacaaaggggagtatacattaa 30056041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 518
Target Start/End: Original strand, 3222556 - 3222624
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatt 518  Q
    |||||||||||| |||||||||||| |||||| |  ||||| ||||||||||||| | |||||||||||    
T  3222556 tgtggtcacacagaccatatatttgattaactaatcttttttagagtgatacaaacgaatgtacacatt 3222624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 518
Target Start/End: Complemental strand, 13767189 - 13767125
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatt 518  Q
    |||| ||| ||||||||||||||||||| |||||||  |||||||||||||||  ||||||||||    
T  13767189 gtcagacagaccatatatttggttaacttaaattttctagagtgatacaaaggagtgtacacatt 13767125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 2835086 - 2835157
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| |   ||||||||||||||| ||||||||||||||| ||||||  ||| |||||||||||    
T  2835086 tgtggtcacacagatggtatatttggttaacttaaatttttcagagtggtacaaattgatatacacattaag 2835157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 138813 - 138878
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacat 517  Q
    ||||||||||| || ||||||||||||||||||| ||||| |||||  ||||||||| |||||||||    
T  138813 gtggtcacacacac-atatatttggttaactgaatttttttagagtagtacaaaggggtgtacacat 138878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 146834 - 146899
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacat 517  Q
    ||||||||||| || ||||||||||||||||||| ||||| |||||  ||||||||| |||||||||    
T  146834 gtggtcacacacac-atatatttggttaactgaatttttttagagtagtacaaaggggtgtacacat 146899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 2430706 - 2430648
Alignment:
Q  262 gttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||| |||||| |||| ||||| ||||||| |||||| ||||||||||||||    
T  2430706 gttaaccaaatatatggtttgtgtgaccacattttttcagttgcgtgaccactattttt 2430648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 2430650 - 2430684
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||||||||||||||||    
T  2430650 aaatagtggtcacgcaactgaaaaaatgtggtcac 2430684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 7707042 - 7706943
Alignment:
Q  204 caatgataggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||| ||||||||  ||| |||||  |||||||||| ||| |||||||||||||||| |||| ||| |||||||  || | ||||||| ||||    
T  7707042 caatgataggttgacatctt--tgtatacactcctttgtatcattttaaaaaatttcagttaactaaatatatagtctgtgtaactacatttttttagtt 7706945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 20084595 - 20084697
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||| | |||| || ||   |||||||||| |||||||||||| |||||| |||| ||||| || ||||| ||||| ||| ||||| ||||    
T  20084595 cttaatgtgtacatccctttataccatgctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatattttatgttgcgtgatcactactttt 20084694  T
Q  321 tca 323  Q
    |||    
T  20084695 tca 20084697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 11108067 - 11108160
Alignment:
Q  205 aatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttt 297  Q
    |||| |||||||||| ||||||||||||||     |||||  ||| |||||||||||| |||||||||| ||||||||||| ||||| ||||||    
T  11108067 aatggtaggtagacactcttaatgtgtacattcacttgtactactctgaaaaatttcaattaaccaaatatatggtctgtgtgaccacattttt 11108160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 11108155 - 11108203
Alignment:
Q  386 atttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||| |  | |||||||||||||||||||||||||||||||    
T  11108155 atttttcagcttattgacagtggtcacgcaactgaaaaaatgtggtcac 11108203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 11108195 - 11108271
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| | ||||||||||||||| |||| ||||| ||| | |||||||  ||| ||||||||||| ||||    
T  11108195 tgtggtcacacaaatcatatatttggttaattgaatttttttagaataatacaaaaagatatacacattaagggtgt 11108271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 15341909 - 15341853
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| ||||| |||||||||| ||  |||||||||||||||||    
T  15341909 ccaaatatatggtctgtgtgaccacattttttaaggtgtgtgaccactattttttca 15341853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 19846091 - 19846147
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| || || || ||||||| |||||||||||||||||||||    
T  19846091 ccaaatatatggtctgtgtgatcacatattttaaggtgcatgaccactattttttca 19846147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 520
Target Start/End: Original strand, 22608505 - 22608557
Alignment:
Q  468 atatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||| |||||    
T  22608505 atatttggttaactgaaaattttcaaaatgatacaaaggggtgtacatattaa 22608557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 485
Target Start/End: Original strand, 2365669 - 2365704
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaa 485  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2365669 tgtggtcacgcataccatatatttggttaactgaaa 2365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 3620741 - 3620674
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||| |||||||||||| |||||| |||   ||||||||| || ||| ||||||||||||||||    
T  3620741 gtcacacaaaccatatatttgtttaactaaaaaaattcagagtggtataaatggatgtacacattaag 3620674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 13767125 - 13767184
Alignment:
Q  224 aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgt 283  Q
    |||||||||||  |||||||||||| |  ||||||| |||||||||||| ||||||||||    
T  13767125 aatgtgtacactcctttgtatcactctagaaaatttaagttaaccaaatatatggtctgt 13767184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 15341485 - 15341430
Alignment:
Q  268 caaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    ||||| ||||||||||| || || |||||||||| ||| |||||||||||||||||    
T  15341485 caaatatatggtctgtgtgaacacattttttaagatgcgtgaccactattttttca 15341430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 9068503 - 9068537
Alignment:
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||| |||||||||||||||    
T  9068503 aaatagtggtcacgcaactaaaaaaatgtggtcac 9068537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 14524093 - 14524147
Alignment:
Q  269 aaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||| ||||||||||| ||||| ||| |||||| ||| |||||||||||||||||    
T  14524093 aaatatatggtctgtgtgaccacattgtttaaggtgcgtgaccactattttttca 14524147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 10304858 - 10304793
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||| ||| ||| |||| ||||||||||| ||||| ||||||| |||||| ||| ||||||||    
T  10304858 aaaattttagtgaactaaatatatggtctgtgtgaccacattttttcagttgcgtgatcactattt 10304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 33815174 - 33815109
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||| |||| ||||| |||| ||| ||||||| ||||| ||||||| |||||| ||||||||||||    
T  33815174 aaaacttcaattaactaaatatatagtctgtgtgaccacattttttcagttgcgtgaccactattt 33815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 434
Target Start/End: Original strand, 2365649 - 2365677
Alignment:
Q  406 tggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||||||||||    
T  2365649 tggtcacgcaactgaaaaaatgtggtcac 2365677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 15341697 - 15341641
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| ||||||||||| || || ||||||||||  || |||||||||||||||||    
T  15341697 ccaaatatatggtctgtgtgatcacattttttaaggcgcgtgaccactattttttca 15341641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 15342121 - 15342065
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| |||||| ||||  |||| |||||||||| ||| |||||||||||||||||    
T  15342121 ccaaatgtatggtttgtgtaaccacattttttaaggtgcgtgaccactattttttca 15342065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 121; Significance: 9e-62; HSPs: 4)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 204 - 430
Target Start/End: Original strand, 104 - 332
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcact-ttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaag 301  Q
    |||||| ||||||||||||| ||||||||||    |||||| |||| |||||||||||||||||||||||| ||||| ||||| || || ||| ||| ||    
T  104 caatgacaggtagacatctttaatgtgtacatttttttgtaccactcttgaaaaatttcagttaaccaaatatatggactgtgtgatcacattgttttag 203  T
Q  302 ttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaa 401  Q
    |||| ||||||||| |||||||||| |||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||    
T  204 ttgcgtgaccactaatttttcaaaaattatttggataagtaagtggaaaaatagtggtcatgcgcattttagttgcgtgaccacatttttcagcttctaa 303  T
Q  402 atagtggtcacgcaactgaaaaaatgtgg 430  Q
    ||||||||||||||||||||||| |||||    
T  304 atagtggtcacgcaactgaaaaagtgtgg 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 328 - 404
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||| ||||    
T  328 tgtggccacacagaccatatatttggttaactgaaaattttcagagtggtacaaagagatgtacaaattaagggtgt 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 399 - 302
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||| |||||| | ||||||| |||| |||||| |||||||||||||||| ||||||||||| | ||| | ||||| |||||| ||||||||||||    
T  399 cttaatttgtacatctctttgtaccactctgaaaattttcagttaaccaaatatatggtctgtgtggccacactttttcagttgcgtgaccactattt 302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 194 - 123
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttc-agagtgatacaaagggatgtacacattaa 520  Q
    |||| |||||||  |||||||||||||||||||||||||||| |||||| ||||||   |||||||||||||    
T  194 tgtgatcacacagtccatatatttggttaactgaaatttttcaagagtggtacaaaaaaatgtacacattaa 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 204 - 434
Target Start/End: Complemental strand, 20556982 - 20556748
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||| ||| ||||| || ||||  ||||||||||||||||||| ||||||||||| |||| ||| ||||||  ||||| |||||||  ||    
T  20556982 caatgataggtagatatccttaatatgcacactcctttgtatcactttgaaaattttcagttaactaaatatatagtctgtttgaccacatttttttggt 20556883  T
Q  303 tgcatgaccactatttttt---caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 399  Q
    ||  |||||||||||||||   || ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||| || ||||||||||||||    
T  20556882 tgagtgaccactatttttttttcagaatttatttggttaactaagtggaaaaatattggtcacgcgtattttagttgcgtgaccacatttttcagcttct 20556783  T
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||| ||||||||||||| |||||||    
T  20556782 aaatagtggtcacacaactgaaaaaatatggtcac 20556748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 205 - 434
Target Start/End: Original strand, 5083690 - 5083918
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||||||||| ||||| | || ||| |||| ||||||||||||||||||||||||| ||||| |||||||| || ||||| |||||||| |||    
T  5083690 aatgataggtagacatccttaatctatatacccctttatatcactttgaaaaatttcagttaatcaaatatatggtctttgtgaccacatttttta-gtt 5083788  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
     | ||||||||||||||  | ||||||||| |||||| || | |||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||    
T  5083789 acgtgaccactatttttctagaatttatttcgttaacaaagttgaaaaatagtggtcacccgcattt-agttgcgtgaccatatttttcaacttctaaat 5083887  T
Q  404 agtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||| |||||||||||||||||    
T  5083888 agtggtcacgcaattgaaaaaatgtggtcac 5083918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 252 - 434
Target Start/End: Complemental strand, 31303616 - 31303435
Alignment:
Q  252 aaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||||||||||| |||| |||||| |||| ||||| |||||||| ||||| |||||||||| ||| || ||||||||||||||||||| |||||||    
T  31303616 aaaaatttcagttaacaaaatatatggtatgtgtgaccacatttttta-gttgcgtgaccactatgtttccagaatttatttggttaactaagtggaaaa 31303518  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31303517 atagtggtcacgcacattttagttgcatgaccacatttttcagcttctaaatagtggtcacgcaattgaaaaaatgtggtcac 31303435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 221 - 434
Target Start/End: Complemental strand, 21589818 - 21589605
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||||| |  ||| || |||| | |||||||||||||| |||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  21589818 cttaatgtgtacatccgtttataccactctaaaaaatttcagttatccaaatatatggtctgtgtgaccacatttttttagttgcatgaccactattttt 21589719  T
Q  321 tcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactga 420  Q
     || || ||||||| |||| ||| |||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||||||| |||| |||||||    
T  21589718 ccagaacttatttgattaattaagtggaaaaatagtggtcacacgcattttagttgcatgaccacatttttcagcttctaaatagtgatcacacaactga 21589619  T
Q  421 aaaaatgtggtcac 434  Q
    |||||| |||||||    
T  21589618 aaaaatatggtcac 21589605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 204 - 433
Target Start/End: Complemental strand, 4291039 - 4290810
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||| | ||| |||||||  | | |||||||  |||||||||||||||||||||||||||  ||| |||||  |||||  |||||| |||    
T  4291039 caatgataggtagatacctttaatgtgtcaatctctttgtactactttgaaaaatttcagttaaccaaataaatgatctgtatgaccacgtttttttagt 4290940  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||| || |||||||| ||||||||    
T  4290939 tgcgtgaccactagtttttcagaatttatttggttaactaagtggaaaaatagtggtcacgcaca-cttagttgcgtgaccacatttttcaacttctaaa 4290841  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtca 433  Q
    |||||||||| ||||||||||||||||||||    
T  4290840 tagtggtcactcaactgaaaaaatgtggtca 4290810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 204 - 434
Target Start/End: Complemental strand, 18313039 - 18312809
Alignment:
Q  204 caatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||| ||| ||| |||||||||| ||||  ||||||| |||| ||||||||||||| ||||||||| |||||| |||| | | | ||||||| |||    
T  18313039 caatgatacgtaaacactcttaatgtgcacactcctttgtaccactctgaaaaatttcagctaaccaaatatatggtttgtgtggctaaatttttttagt 18312940  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| ||||||||||||||  | |||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||| || | |||||||||||||||    
T  18312939 tgcgtgaccactatttttcaagaatttattaggttaactaagtggaaaaatagtggtcacatgcattttagttgcgtgagcaca-ttttcagcttctaaa 18312841  T
Q  403 tagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||| || ||||||||||||| ||||||||||    
T  18312840 tagtagtgacgcaactgaaaatatgtggtcac 18312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 252 - 434
Target Start/End: Complemental strand, 21548616 - 21548434
Alignment:
Q  252 aaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaa 351  Q
    |||||||||||||||| |||| ||||||||||| || ||||||| || |||||| |||||||||||||| || ||||||||||||||||||| |||||||    
T  21548616 aaaaatttcagttaactaaatatatggtctgtgtgatcatatttgtttagttgcgtgaccactatttttccagaatttatttggttaactaagtggaaaa 21548517  T
Q  352 atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    | |||||| |||||||||  |||||||||| || |||||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  21548516 acagtggttacgcgcattcgagttgcgtgaccacatttttcagcttttaaatattggtcacacaactgaaaaaatatggtcac 21548434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 204 - 412
Target Start/End: Original strand, 28804883 - 28805094
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta--- 299  Q
    |||||||||||||||| | ||||| ||||||||  |||||| || | |  |||||||||||||||||||| |||||||| || ||||| |||||||        
T  28804883 caatgataggtagacacccttaatatgtacacccttttgtaccattctagaaaatttcagttaaccaaatatatggtctatgtgaccacatttttttttt 28804982  T
Q  300 agttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 399  Q
    |||||  |||||||||| ||| || ||||||||||||||||||| |||||||||||||||| |||||||||| |||| |||| || ||||||||||||||    
T  28804983 agttgtgtgaccactatatttccataatttatttggttaactaagtggaaaaatagtggtc-cgcgcattttggttgtgtgaccacatttttcagcttct 28805081  T
Q  400 aaatagtggtcac 412  Q
    |||||||| ||||    
T  28805082 aaatagtgatcac 28805094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 292 - 425
Target Start/End: Original strand, 22740644 - 22740776
Alignment:
Q  292 attttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatattttt 391  Q
    ||||||| | |||| |||| |||||||||||| ||||||||||||||||||| |||||||||| || ||||||  ||||||||||||||| |||||||||    
T  22740644 atttttttaattgcgtgactactattttttcagaatttatttggttaactaagtggaaaaataatgatcacgcatattttagttgcgtgaccatattttt 22740743  T
Q  392 cagcttctaaatagtggtcacgcaactgaaaaaa 425  Q
    |||||| |||||| ||||||| ||||||||||||    
T  22740744 cagcttttaaata-tggtcacacaactgaaaaaa 22740776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 434
Target Start/End: Original strand, 15958248 - 15958441
Alignment:
Q  242 tatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggt----t 337  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| ||||| ||||||| |||||  ||||||||||||||||| ||||||||||||    |    
T  15958248 tatcactttgaaaaatttaagttaaccaaatatatggtcagtgtgaccacatttttttagttgtgtgaccactattttttcagaatttatttggttaaat 15958347  T
Q  338 aactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    || ||||   |||||| ||| |||||| || |||| |||||||| || ||||||||||||||||||||| |||| ||||||  ||||||||||||||    
T  15958348 aagtaaaaaaaaaaattgtgatcacgcaca-tttaattgcgtgaccacatttttcagcttctaaatagt-gtcatgcaact-taaaaatgtggtcac 15958441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 403
Target Start/End: Complemental strand, 32964964 - 32964775
Alignment:
Q  204 caatgataggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||| ||||||| ||| ||||| ||||||  ||||||||||| | |||||||| ||||||| | || ||||||||||| ||||| || |||| |||    
T  32964964 caatgatatgtagacacctttaatgtatacacccttttgtatcactctaaaaaatttaagttaactatatatatggtctgtgtgaccacatatttttagt 32964865  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| ||||||||||||           ||| |||||| ||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  32964864 tgcgtgaccactattt-----------attaggttaattaagtggaaaaatagtggtcacgtgcattttagttacatgaccatatttttcagcttctaaa 32964776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 28805142 - 28805218
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||    
T  28805142 tgtggtcacacataccatatatttggttaacttaaatttttcagagtgatacaaaggggtatacacattaagggtgt 28805218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 22033255 - 22033156
Alignment:
Q  220 tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttt 319  Q
    |||||||||||||| | ||||||| || | |||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||||||    
T  22033255 tcttaatgtgtacatc-ctttgtaccattctgaaaaattttagttaaccaaatatatggtctgtgtgaccatattttttgagttgcgtgaccactatttt 22033157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 28805213 - 28805113
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttt 320  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||||||||| |||||| |||| ||||| ||||||| |||||| ||| ||| ||||||    
T  28805213 cttaatgtgtatacccctttgtatcactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacattttttcagttgcgtgatcacgattttt 28805114  T
Q  321 t 321  Q
    |    
T  28805113 t 28805113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 31303443 - 31303367
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| || ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  31303443 tgtggtcacgcagaccatgtatttggttgactgaaatttttcagagtgatacaaatggatgtacacattaagggtgt 31303367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 21589747 - 21589823
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||| || ||| |||||||||||||||| ||||    
T  21589747 tgtggtcacacagaccatatatttggataactgaaattttttagagtggtataaacggatgtacacattaagggtgt 21589823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 326 - 403
Target Start/End: Original strand, 46943761 - 46943839
Alignment:
Q  326 atttatttggttaactaaatggaaaa--atagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||||||| || ||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  46943761 atttatttggttaactaagtgaaaaaaaatagtggtcacgcgcattttagttgcgtgatcaca-ttttcagcttctaaat 46943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 450 - 521
Target Start/End: Complemental strand, 22033050 - 22032980
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||| |||||| ||||||||||||||||    
T  22033050 tgtggtcacacataccatatatttggttaacttaaattttaaagagtggtacaaa-ggatgtacacattaag 22032980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 452 - 521
Target Start/End: Original strand, 22033186 - 22033254
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||| ||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||||    
T  22033186 tggtcacacagaccatatatttggttaactaaaatttttcagaatggtacaaa-ggatgtacacattaag 22033254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 31303372 - 31303469
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||||| |  ||||||||||| |||||||||||||| ||||||||  |||||||| | ||||| ||||||| | |||| ||||||||||||    
T  31303372 cttaatgtgtacatccatttgtatcactctgaaaaatttcagtcaaccaaatacatggtctgcgtgaccacattttttcaattgcgtgaccactattt 31303469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 22740146 - 22740070
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| |||||||||||| |||||| |||| ||||||||||||||| || | ||||||||||||| ||||    
T  22740146 tgtggtcacacagaccatatatttgattaacttaaatatttcagagtgatacatagaggtgtacacattaagagtgt 22740070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 22740057 - 22740152
Alignment:
Q  204 caatgataggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt 298  Q
    ||||||||| | |||| |||||||||||||||| || ||||||||| ||||| |||| |||||| ||||| ||||||||||| ||||| |||||||    
T  22740057 caatgatagattgacactcttaatgtgtacacctctatgtatcactctgaaatatttaagttaatcaaatatatggtctgtgtgaccacatttttt 22740152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 5174996 - 5174910
Alignment:
Q  286 gaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcatttta 372  Q
    ||||| ||||||| | | || ||||||||| ||||||| |||||||||| |||||||| || ||||||||||||||||| |||||||    
T  5174996 gaccacatttttttaatcgcgtgaccactaatttttcagaatttatttgattaactaagtgtaaaaatagtggtcacgcacatttta 5174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 18312956 - 18313026
Alignment:
Q  456 cacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||  ||| ||||||||| ||||    
T  18312956 cacacaaaccatatatttggttagctgaaatttttcagagtggtacaaaggagtgtgcacattaagagtgt 18313026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 31303576 - 31303646
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||| || ||| ||||||| |||||||    
T  31303576 tgtggtcacacataccatatattttgttaactgaaatttttttgagtggtataaaaggatgtagacattaa 31303646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 20556685 - 20556782
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||||| | | |||||| | ||| |  |||||||||||||||||||| ||||||| ||| ||||||||||||| |||||  ||||||||||||    
T  20556685 cttaatgtgtatatctctttgtgttactctcgaaaatttcagttaaccaaatatatggtcggtgtgaccatattttttcagttgtgtgaccactattt 20556782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 403
Target Start/End: Original strand, 27523442 - 27523583
Alignment:
Q  263 ttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt-caaaatttatttggttaactaaatggaaaaatagtggtca 361  Q
    |||| ||||| |||| |||||| || || ||||||| |||||  | || |||||||||| || ||||||||||||||| ||| |||||||||||| ||||    
T  27523442 ttaatcaaatatatgatctgtgtgatcacatttttttagttgtgtaactactatttttttcagaatttatttggttaattaagtggaaaaatagtagtca 27523541  T
Q  362 cgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
     || ||||||| |||  ||| ||| |||||||| ||||||||    
T  27523542 agcacattttaattgtatgaccatgtttttcagtttctaaat 27523583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 452 - 526
Target Start/End: Complemental strand, 20556754 - 20556680
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||  |||||||||||||||||||||||||||  ||||| | |||||| ||| ||||||||||| ||||    
T  20556754 tggtcacaccgaccatatatttggttaactgaaattttcgagagtaacacaaagagatatacacattaagggtgt 20556680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 32964875 - 32964945
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||| | ||||||| |||||||| ||||||||||||| || |||| |||||||    
T  32964875 tgtggtcacacagaccatatatatagttaacttaaattttttagagtgatacaaaagggtgtatacattaa 32964945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 5083778 - 5083721
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||| | |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  5083778 tgtggtcacaaagaccatatatttgattaactgaaatttttcaaagtgatataaaggg 5083721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 502
Target Start/End: Original strand, 15958433 - 15958485
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgataca 502  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  15958433 tgtggtcacacagaccatatatttagttaactgaaattttacagagtggtaca 15958485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 28804972 - 28804896
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| | |||||||||||||||||||||||||||  ||| || |||||| || |||||| |||||| ||||    
T  28804972 tgtggtcacatagaccatatatttggttaactgaaattttctagaatggtacaaaagggtgtacatattaagggtgt 28804896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 5083910 - 5083980
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||||||||||||||||||| | || |||||||||  ||| | |||||||||| |||| |||||||    
T  5083910 tgtggtcacacataccatatatttgatgaattgaaattttcgagaataatacaaaggggtgtatacattaa 5083980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 15958298 - 15958248
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgata 500  Q
    |||||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  15958298 tgtggtcacactgaccatatatttggttaacttaaatttttcaaagtgata 15958248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 15958485 - 15958416
Alignment:
Q  240 tgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgac 310  Q
    |||| |||| || ||||||||||||||| |||| ||||||||||| ||||| | |||||||||||||||||    
T  15958485 tgtaccactctgtaaaatttcagttaactaaatatatggtctgtgtgaccaca-tttttaagttgcatgac 15958416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 521
Target Start/End: Complemental strand, 32964741 - 32964672
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||||||||||||| ||||||| ||||| || |||||| |  ||| | ||||||||||||||    
T  32964741 tggtcacacataccatatatttagttaacttaaattctttagagtggtgtaaatgaatgtacacattaag 32964672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 5174878 - 5174814
Alignment:
Q  457 acacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||| ||||||||| || ||||||||||||||  || ||| ||||||| |||||||||||||||    
T  5174878 acacaaaccatatatatgattaactgaaattttcgagcgtggtacaaagagatgtacacattaag 5174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 18312817 - 18312741
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| | |||||||||||| |||| |||||||||  |||||| ||||||||| | ||||| ||||| ||||    
T  18312817 tgtggtcacagagaccatatatttgattaattgaaattttcgagagtggtacaaaggggtatacacgttaagggtgt 18312741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 506
Target Start/End: Original strand, 20556893 - 20556949
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagg 506  Q
    |||||||| ||| || |||||||| ||||||||||| |||||| |||||||||||||    
T  20556893 tgtggtcaaacagactatatatttagttaactgaaaattttcaaagtgatacaaagg 20556949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 410
Target Start/End: Original strand, 2887188 - 2887230
Alignment:
Q  368 ttttagttgcgtgatcatatttttcagcttctaaatagtggtc 410  Q
    |||||||||||| | || |||||||||||||||||||||||||    
T  2887188 ttttagttgcgtaaccacatttttcagcttctaaatagtggtc 2887230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 21548581 - 21548646
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||| ||||||||||| |||||||||||||||| ||| || ||| |||| || |||||||||||    
T  21548581 tcacacagaccatatatttagttaactgaaattttttagaatggtac-aaggaatatacacattaag 21548646  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 4290951 - 4291020
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||| ||| | ||| |||||||||||||||||||||||| |||  ||||||| |||  |||||||||    
T  4290951 gtggtcatacagatcatttatttggttaactgaaatttttcaaagtagtacaaagagattgacacattaa 4291020  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 505
Target Start/End: Complemental strand, 21548440 - 21548388
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaag 505  Q
    |||||||||||||||||| |||| ||||||||||||||  |||||| |||||||    
T  21548440 tggtcacacataccatat-tttgattaactgaaattttcaagagtggtacaaag 21548388  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 22032980 - 22033056
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt 298  Q
    ||||||||||||| | ||||||| |||| |  ||||||| |||||||||||| |||||| |||| ||||| |||||||    
T  22032980 cttaatgtgtacatc-ctttgtaccactctttaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttt 22033056  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 5083980 - 5083884
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||| |||||| |||||||| | | |  ||||||||| || | ||||| |||||| |||| ||||| ||||||| | |||| ||||||||||||    
T  5083980 ttaatgtatacacccctttgtattattctcgaaaatttcaattcatcaaatatatggtatgtgtgaccacattttttcaattgcgtgaccactattt 5083884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 204 - 434
Target Start/End: Original strand, 1966731 - 1966960
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagt 302  Q
    |||||||||||||||| | ||| ||| ||||||  |||||| |||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| ||    
T  1966731 caatgataggtagacacccttactgtatacacccttttgtaccactctgaaaa-tttcagttaaccaaatatatggtctgtgtgaccacatttttta-gt 1966828  T
Q  303 tgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaa 402  Q
    ||| ||||||||| |||| || ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  1966829 tgcgtgaccactagttttccagaatttatttggttaattaagtggaaaaatagtggtcacgcgca-tttagttgcgtgaccacatttttcagcttctaaa 1966927  T
Q  403 tagtggtcacgcaact-gaaaaaatgtggtcac 434  Q
    ||||||||||||||||  |||||||||||||||    
T  1966928 tagtggtcacgcaactaaaaaaaatgtggtcac 1966960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 220 - 434
Target Start/End: Complemental strand, 9809272 - 9809056
Alignment:
Q  220 tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta--agttgcatgaccactatt 317  Q
    |||||||||||| |||  |||||| |||| |  ||| ||| |||||||||| | ||||||||||| ||||| |||||||   |||||| |||||| | ||    
T  9809272 tcttaatgtgtaaacctatttgtaccactctagaaattttaagttaaccaagtatatggtctgtgtgaccacatttttttttagttgcgtgaccattttt 9809173  T
Q  318 ttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaac 417  Q
    ||| || || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||    
T  9809172 tttccataaattatttggttaactaaatggaaaaatagtggtcacgcgcatttgagttgcgtgactacatttttcagcttctaaatagtggtcacgcaac 9809073  T
Q  418 tgaaaaaatgtggtcac 434  Q
    |||||||||||||||||    
T  9809072 tgaaaaaatgtggtcac 9809056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 17633257 - 17633468
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactatttttt 321  Q
    |||||||||||||   |||||| ||||  ||||||||| |||||||||||| ||||||||||| ||||| |||||||| | ||||||||||| |||| |     
T  17633257 ttaatgtgtacactcatttgtaccactccgaaaaattttagttaaccaaatatatggtctgtgtgaccacatttttta-gatgcatgaccacaatttgtc 17633355  T
Q  322 caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttc-agcttctaaatagtggtcacgcaactga 420  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||| | |||||| || ||||||||||||||||    
T  17633356 caaaatttatttggttaactaagttaaaaaatagtggtcacgcgcattttagttgcgtgaccatatttttcaaacttctagat-gtggtcacgcaactga 17633454  T
Q  421 aaaaatgtggtcac 434  Q
    ||||||||||||||    
T  17633455 aaaaatgtggtcac 17633468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 300 - 434
Target Start/End: Complemental strand, 16583712 - 16583578
Alignment:
Q  300 agttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct 399  Q
    |||||| |||| ||||||||  || ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16583712 agttgcgtgactactattttaccataatttatttggttaattaagtggaaaaatagtggtcacgcgcattttagttgcatgatcatatttttcagcttct 16583613  T
Q  400 aaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||||||||||||||||||||||||||||||    
T  16583612 aaatagtggtcacgcaactgaaaaaatgtggtcac 16583578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 205 - 423
Target Start/End: Complemental strand, 14351274 - 14351055
Alignment:
Q  205 aatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    ||||||||||||||| | ||||||||| |||  ||||||| |||| | ||||| || |||||||||||| |||||| |||| ||||||||||||  ||||    
T  14351274 aatgataggtagacacccttaatgtgtgcacttctttgtaccactctcaaaaaatttagttaaccaaatatatggtttgtgtgaccatatttttctagtt 14351175  T
Q  304 gcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    || |||||||||||||  |||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||| || ||| |||||| ||||    
T  14351174 gcgtgaccactattttgacaaaatttatttggttaactaagtggaaaaatagtggtcatggacattttagttgcgtgatcacatcttttagcttcaaaat 14351075  T
Q  404 agtggtcacgcaactgaaaa 423  Q
    |||||| | |||| ||||||    
T  14351074 agtggttatgcaattgaaaa 14351055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 220 - 431
Target Start/End: Complemental strand, 9810959 - 9810745
Alignment:
Q  220 tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta-agttgcatgaccactattt 318  Q
    |||||||||||| |||  |||||| |||| |  ||| ||| |||||||||||| ||||||||||| ||||| |||||||  |||||| |||||| | |||    
T  9810959 tcttaatgtgtaaacctatttgtaccactctagaaattttaagttaaccaaatatatggtctgtgtgaccacattttttttagttgcgtgaccaattttt 9810860  T
Q  319 ttt--caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaa 416  Q
    |||  || || |||||||||||||||||||||||||||| |||||||| ||||| ||||||||||  | |||||| ||||||||||||||||||||||||    
T  9810859 tttttcataaattatttggttaactaaatggaaaaatagaggtcacgcacatttgagttgcgtgactacattttttagcttctaaatagtggtcacgcaa 9810760  T
Q  417 ctgaaaaaatgtggt 431  Q
    |||||||||||||||    
T  9810759 ctgaaaaaatgtggt 9810745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 425
Target Start/End: Complemental strand, 19596996 - 19596773
Alignment:
Q  204 caatgataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttta-ag 301  Q
    |||||||||||||||  | |||||||||||| |  |||||| |  |||| |||||||||||||||||||| ||||||  ||| ||||| |||||||  ||    
T  19596996 caatgataggtagacgcccttaatgtgtacatccttttgtacccttttggaaaatttcagttaaccaaatatatggtacgtgtgaccacattttttttag 19596897  T
Q  302 ttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaa 401  Q
     ||| |||||||||| |||||| ||||||||||||||||||| |||  ||||||| |||| ||||||||||||||||||| || ||||||||||||||||    
T  19596896 ctgcgtgaccactatgttttcagaatttatttggttaactaagtgggtaaatagtagtcatgcgcattttagttgcgtgaccacatttttcagcttctaa 19596797  T
Q  402 atagtggtcacgcaactgaaaaaa 425  Q
    ||| |||| || || |||||||||    
T  19596796 ataatggttacacagctgaaaaaa 19596773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 238 - 424
Target Start/End: Complemental strand, 42908745 - 42908560
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggtt 337  Q
    |||||| |||| |||||||||| |||||||||||| |||||| |||| ||||| |||||||| ||||  | |||||||||||| || |||||||||||||    
T  42908745 tttgtaccactctgaaaaatttaagttaaccaaatatatggtatgtgtgaccacatttttta-gttgagtcaccactatttttccagaatttatttggtt 42908647  T
Q  338 aactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcata-tttttcagcttctaaatagtggtcacgcaactgaaaaa 424  Q
    ||||||  ||||| ||||||||||||||||||||||||||||||||| | ||||||| ||| ||||| |||||||| |||||||||||    
T  42908646 aactaagaggaaacatagtggtcacgcgcattttagttgcgtgatcacattttttcaacttttaaat-gtggtcacacaactgaaaaa 42908560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 204 - 425
Target Start/End: Original strand, 8740690 - 8740908
Alignment:
Q  204 caatgataggtagacatcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagtt 303  Q
    |||||||||||||||| ||||||||    ||| ||||| | |||| |||||||||  |||||| ||||| |||||| | || ||||| ||||||| ||||    
T  8740690 caatgataggtagacaccttaatgt----acccctttgcaccactctgaaaaattcaagttaatcaaatatatggtttatgtgaccacatttttttagtt 8740785  T
Q  304 gcatgacc---actattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttcta 400  Q
    |  |||||   |||| |||| || ||||||||| ||||||||| | ||||||||||||||||||||||||||| | ||||| || |||||||||||||||    
T  8740786 g-gtgaccactactacttttccataatttatttagttaactaagtagaaaaatagtggtcacgcgcattttag-tacgtgaccacatttttcagcttcta 8740883  T
Q  401 aatagtggtcacgcaactgaaaaaa 425  Q
    ||||||| |||||||||||||||||    
T  8740884 aatagtgatcacgcaactgaaaaaa 8740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 307 - 423
Target Start/End: Original strand, 33249616 - 33249732
Alignment:
Q  307 tgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagt 406  Q
    ||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| |||||||||  ||||||| || |||||||| ||||||||||||    
T  33249616 tgaccactactttttcaaaatttatttgattaactaggtggaaaaatagtggtcacacgcattttatgtgcgtgaccacatttttcaccttctaaatagt 33249715  T
Q  407 ggtcacgcaactgaaaa 423  Q
    |||||||||||||||||    
T  33249716 ggtcacgcaactgaaaa 33249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 226 - 434
Target Start/End: Complemental strand, 24669363 - 24669155
Alignment:
Q  226 tgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaa 325  Q
    |||||||||| ||||||| |||| |||||||||| |||||| ||||| ||||||||||| ||||| ||||||| |||||| ||||||||               
T  24669363 tgtgtacacccctttgtaccactctgaaaaatttaagttaatcaaatatatggtctgtgtgaccacattttttcagttgcgtgaccact----------- 24669275  T
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttct-----------aaatagtggtcacgc 414  Q
    |||||||||||||||||| || ||||||||||||||| || ||||||||||||||| ||||||||| || ||||           |||||||||||||||    
T  24669274 atttatttggttaactaagtgaaaaaatagtggtcacacgaattttagttgcgtgaccatatttttgagtttctaaatgctgaaaaaatagtggtcacgc 24669175  T
Q  415 aactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||||    
T  24669174 aactgaaaaaatgtggtcac 24669155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 274 - 434
Target Start/End: Original strand, 35544388 - 35544546
Alignment:
Q  274 tatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttag 373  Q
    |||||| |||| |||||||||||||| |||| | ||  ||||||| | |||||||||||| ||||| ||| ||||||||||||| |||| ||||||| ||    
T  35544388 tatggtttgtgtgaccatatttttta-gttgtacgattactatttatccaaaatttatttagttaattaagtggaaaaatagtgatcacacgcattt-ag 35544485  T
Q  374 ttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||||| || ||||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  35544486 ttgcgtgaccacatttttcagcttctaaatagtggtcatacaacggaaaaaatgtgatcac 35544546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 286 - 434
Target Start/End: Complemental strand, 2433842 - 2433694
Alignment:
Q  286 gaccatattttttaagttgcatgaccactatttttt--caaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatc 383  Q
    |||||||||||||| ||||||| |||||||||||||  || |||||||||||||||| || || |||||||||||||||| |||||||  || | ||| |    
T  2433842 gaccatatttttta-gttgcattaccactattttttttcataatttatttggttaacaaagtgaaaaaatagtggtcacgtgcatttttttt-catgacc 2433745  T
Q  384 atatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    | ||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  2433744 acatttttcagcttctaaatagtggtcaaacaactgaaaaaatgtgatcac 2433694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 307 - 423
Target Start/End: Original strand, 33179759 - 33179875
Alignment:
Q  307 tgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagt 406  Q
    ||||||||| ||||| | |||||||||| |||||||| |||||||||||||||||| ||||||||||||| |||  || ||||||||  |||||||||||    
T  33179759 tgaccactacttttttagaatttatttgattaactaagtggaaaaatagtggtcacacgcattttagttgtgtggccacatttttcactttctaaatagt 33179858  T
Q  407 ggtcacgcaactgaaaa 423  Q
    ||||||||| |||||||    
T  33179859 ggtcacgcagctgaaaa 33179875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 17633531 - 17633439
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccac 313  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||||||    
T  17633531 cttaatatgtacacccctttgtaccactttgaaaaatttcagttaaccaaatatatggtctgtgtgaccacattttttcagttgcgtgaccac 17633439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 55666844 - 55666951
Alignment:
Q  325 aatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaa 424  Q
    |||||||||| |||||||| |||||||||||||||||||  |||||||||| ||||| ||  ||||||||||| |||||| |||||||||||||| ||||    
T  55666844 aatttatttgcttaactaagtggaaaaatagtggtcacgaacattttagtt-cgtgaccacgtttttcagcttataaataatggtcacgcaactg-aaaa 55666941  T
Q  425 atgtggtcac 434  Q
    ||||||||||    
T  55666942 atgtggtcac 55666951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 17633460 - 17633531
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| |||||| ||||||    
T  17633460 tgtggtcacacagaccatatatttggttaactgaaatttttcaaagtggtacaaaggggtgtacatattaag 17633531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 516
Target Start/End: Original strand, 24669297 - 24669363
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacaca 516  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||    
T  24669297 tgtggtcacacagaccatatatttgattaacttaaatttttcagagtggtacaaaggggtgtacaca 24669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 42908691 - 42908745
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaa 504  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42908691 tgtggtcacacataccatatatttggttaacttaaatttttcagagtggtacaaa 42908745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 16583586 - 16583510
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||||   |||||||||||||||||||||||||||  |||||| ||||||||||||||| ||||||| ||||    
T  16583586 tgtggtcacatcaaccatatatttggttaactgaaattttcgagagtggtacaaagggatgtacgcattaagggtgt 16583510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 19596907 - 19596978
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||||||| |||||||||||||||||||||||||||| || |  | |||||| ||||||||||||||||    
T  19596907 tgtggtcacacgtaccatatatttggttaactgaaattttccaaaagggtacaaaaggatgtacacattaag 19596978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 17633327 - 17633257
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||    
T  17633327 tgtggtcacacagaccatatatttggttaactaaaatttttcggagtggtacaaatgagtgtacacattaa 17633257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 9808993 - 9809090
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||| ||||||||  |||||| | || ||||||| |||||||||| |||| ||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  9808993 cttaatatgtacacccttttgtaccgctatgaaaaaattcagttaactaaatatatggtctgcgtgaccacattttttcagttgcgtgaccactattt 9809090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 20874880 - 20874815
Alignment:
Q  369 tttagttgcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||| | || ||||||||||||||||| |||| |||||||||||||||||| |||||||    
T  20874880 tttagttgcgttaccacatttttcagcttctaaaaagtgatcacgcaactgaaaaaatatggtcac 20874815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 1966819 - 1966744
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| || |||| ||| |||| ||||    
T  1966819 tgtggtcacacagaccatatatttggttaactgaaa-ttttcagagtggtacaaaagggtgtatacagtaagggtgt 1966744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 425
Target Start/End: Original strand, 1966978 - 1967016
Alignment:
Q  387 tttttcagcttctaaatagtggtcacgcaactgaaaaaa 425  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1966978 tttttcagcttctaaatagtggtcacgcaactgaaaaaa 1967016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 19596770 - 19596700
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||||||| |  |||||||||||||| ||| || ||||||||||||| ||||||||| ||||||||||||    
T  19596770 tgtggtcacgctgaccatatatttggtcaacagagatttttcagagtggtacaaaggggtgtacacattaa 19596700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Original strand, 19746941 - 19747011
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||| ||| ||||| ||||| |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  19746941 tgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaa 19747011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 520
Target Start/End: Complemental strand, 19792865 - 19792795
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    |||||||| ||| ||||| ||||| |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  19792865 tgtggtcaaacagaccatgtatttagttaactgaaattttcgagaatgatacaaaggggtgtacacattaa 19792795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 9810679 - 9810776
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||| ||||||||  |||||| |||| |||||||||||||||||  |||| |||||| || |  |||| ||||||| |||||| ||||||||||||    
T  9810679 cttaatatgtacacccttttgtaccactatgaaaaatttcagttaattaaatatatggtttgcgttaccacattttttcagttgcgtgaccactattt 9810776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 16583515 - 16583612
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||| ||||| | ||||||| |||| |  |||||||||||||||||||| ||||||   || ||||| ||||||| |||||| ||||||||||||    
T  16583515 cttaatgcgtacatccctttgtaccactctcgaaaatttcagttaaccaaatatatggttgatgtgaccacattttttcagttgcgtgaccactattt 16583612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 318
Target Start/End: Complemental strand, 55667014 - 55666918
Alignment:
Q  221 cttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    |||||| |||||||  ||||||| ||||||  ||||||||||||||| |||| ||||||||||| ||||| | ||||| |||||| |||||| |||||    
T  55667014 cttaatatgtacactcctttgtaccactttcgaaaatttcagttaactaaatatatggtctgtgtgaccaca-tttttcagttgcgtgaccattattt 55666918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 318
Target Start/End: Complemental strand, 8740991 - 8740883
Alignment:
Q  212 ggtagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatt-ttttaagttgcatga 309  Q
    |||||||||||| ||||||||||    ||||||||||| | |||| |||||||||| ||||| |||| |||||| ||||||||| |||| |||||| |||    
T  8740991 ggtagacatcttcaatgtgtacattcttttgtatcactctcaaaattttcagttaatcaaatgtatgatctgtgtgaccatatttttttcagttgcgtga 8740892  T
Q  310 ccactattt 318  Q
     ||||||||    
T  8740891 tcactattt 8740883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 24669123 - 24669194
Alignment:
Q  253 aaaatttcagttaaccaaat-ttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    ||||||| ||||| |||||| ||||||| |||| ||||| ||||||| |||||| |||||||||||||||||    
T  24669123 aaaatttaagttagccaaatattatggtatgtgtgaccacattttttcagttgcgtgaccactattttttca 24669194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 24669270 - 24669305
Alignment:
Q  399 taaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||||||||||||||||||||||||||||||||||    
T  24669270 taaatagtggtcacgcaactgaaaaaatgtggtcac 24669305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 55666943 - 55667014
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| ||||||||||| |||||||||||||||  | |||| ||||||||  |||||| ||||||    
T  55666943 tgtggtcacacagaccatatatttagttaactgaaattttcgaaagtggtacaaaggagtgtacatattaag 55667014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 518
Target Start/End: Original strand, 8740912 - 8740978
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacatt 518  Q
    |||||||||| | |||| ||||| |||||||||| |||| ||||||||||||| | |||||||||||    
T  8740912 tggtcacacagatcatacatttgattaactgaaaattttgagagtgatacaaaagaatgtacacatt 8740978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 14351188 - 14351262
Alignment:
Q  452 tggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||||||| ||||||||||||||||||| || ||||| |||||| |||||||   || |||||||||| ||||    
T  14351188 tggtcacacaaaccatatatttggttaactaaattttttgagagtggtacaaagaagtgcacacattaagggtgt 14351262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 298
Target Start/End: Original strand, 19596691 - 19596776
Alignment:
Q  214 tagacatctt-aatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatatttttt 298  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||| || ||| ||||||| ||||||| | | ||||| |||||||    
T  19596691 tagacatctttaatgtgtacacccctttgtaccactctgaaaaatctctgttgaccaaatatatggtcagcgtgaccacatttttt 19596776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 9809064 - 9808988
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    ||||||||| || ||||||||||| |||||||||| ||||||| || | |||||| || |||||| |||||| ||||    
T  9809064 tgtggtcacgcagaccatatatttagttaactgaattttttcatagcggtacaaaagggtgtacatattaagggtgt 9808988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 526
Target Start/End: Complemental strand, 9810750 - 9810674
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||| || || |||||||||||  ||||||||||||||||| |||| |||||| || |||||| |||||| ||||    
T  9810750 tgtggtaacgcaaaccatatatttaattaactgaaatttttcatagtggtacaaaagggtgtacatattaagggtgt 9810674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 513
Target Start/End: Complemental strand, 24669163 - 24669099
Alignment:
Q  450 tgtggtcacacataccat-atatttggttaactgaaatttttcagagtgatacaaagggatgtac 513  Q
    |||||||||||||||||| |||||||| ||||| |||||||  ||| ||||||||| ||||||||    
T  24669163 tgtggtcacacataccataatatttggctaacttaaattttctagaatgatacaaatggatgtac 24669099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 526
Target Start/End: Original strand, 25007625 - 25007696
Alignment:
Q  454 gtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaagtgtgt 526  Q
    |||||| | |||||||||||||||||||||||||||  ||| || ||||||||| |||| |||||||| ||||    
T  25007625 gtcacatagaccatatatttggttaactgaaattttcgagaatggtacaaaggg-tgtatacattaagagtgt 25007696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 35544584 - 35544512
Alignment:
Q  246 actttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||| ||||||||||||||| ||||| |||||| |||| || || |||||||  |||| |||||||||||||    
T  35544584 acttttaaaaatttcagttaatcaaatatatggtatgtgtgatcacattttttccgttgtatgaccactattt 35544512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 490
Target Start/End: Original strand, 35544538 - 35544578
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaattttt 490  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  35544538 tgtgatcacacataccatatatttgattaactgaaattttt 35544578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 9810887 - 9810958
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    |||||||||||| ||||||||||||||||||| ||| |||  |||||| ||||||  | | |||||||||||    
T  9810887 tgtggtcacacagaccatatatttggttaacttaaaatttctagagtggtacaaataggtttacacattaag 9810958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 496
Target Start/End: Complemental strand, 20871827 - 20871788
Alignment:
Q  457 acacataccatatatttggttaactgaaatttttcagagt 496  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  20871827 acacataccatatatttgattaattgaaatttttcagagt 20871788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 490
Target Start/End: Complemental strand, 33179765 - 33179726
Alignment:
Q  451 gtggtcacacataccatatatttggttaactgaaattttt 490  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  33179765 gtggtcacacataccacatatttgattaactgaaattttt 33179726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 8740682 - 8740625
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||| | |||||||||||| ||||||  |||||||||||||| | |||||||    
T  8740682 tgtggtcacataaaccatatatttgattaacttgaatttttcagagtggtgcaaaggg 8740625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Complemental strand, 8740774 - 8740717
Alignment:
Q  450 tgtggtcacacataccatatatttggttaactgaaatttttcagagtgatacaaaggg 507  Q
    |||||||||| | |||||||||||| ||||||  |||||||||||||| | |||||||    
T  8740774 tgtggtcacataaaccatatatttgattaacttgaatttttcagagtggtgcaaaggg 8740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 19747011 - 19746950
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgt 283  Q
    |||||||||||||| |||||||||| | |  ||||||||||||||| ||||  |||||||||    
T  19747011 ttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgt 19746950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 19792795 - 19792856
Alignment:
Q  222 ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgt 283  Q
    |||||||||||||| |||||||||| | |  ||||||||||||||| ||||  |||||||||    
T  19792795 ttaatgtgtacacccctttgtatcattctcgaaaatttcagttaactaaatacatggtctgt 19792856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 307 - 434
Target Start/End: Original strand, 24021 - 24147
Alignment:
Q  307 tgaccactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagt 406  Q
    ||||||||| ||||||| |||||||||||| || ||| ||||||||||||||||||||||||||||  ||||| | || |||||| ||||||||||||||    
T  24021 tgaccactagtttttcagaatttatttggtaaaataagtggaaaaatagtggtcacgcgcatttta-atgcgtaaccacattttttagcttctaaatagt 24119  T
Q  407 ggtcacgcaactgaaaaaatgtggtcac 434  Q
    ||||| |||||||||||||||| |||||    
T  24120 ggtcatgcaactgaaaaaatgtagtcac 24147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 24195 - 24113
Alignment:
Q  238 tttgtatcactttgaaaaatttcagttaaccaaatttatg--gtctgtgggaccatattttttaagttgcatgaccactattt 318  Q
    ||||||||| | |||||||||||||| |||| ||| ||||  |||| || ||| | ||||||| |||||||||||||||||||    
T  24195 tttgtatcaatctgaaaaatttcagtgaaccgaatatatgtcgtctatgtgactacattttttcagttgcatgaccactattt 24113  T

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Target: scaffold0251 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 426
Target Start/End: Original strand, 10617 - 10734
Alignment:
Q  309 accactattttttcaaaatttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaatagtgg 408  Q
    |||| |||||||| | ||||||||||||||||||| |||||||||| |||||||| | ||||||||||||||| || |||||| |  || ||||||||||    
T  10617 accattattttttgagaatttatttggttaactaagtggaaaaataatggtcacgggtattttagttgcgtgaccacattttttattttttaaatagtgg 10716  T
Q  409 tcacgcaactgaaaaaat 426  Q
    ||| |||||| |||||||    
T  10717 tcatgcaacttaaaaaat 10734  T

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Target: scaffold0251; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 10819 - 10708
Alignment:
Q  208 gataggtagacatc-ttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgca 306  Q
    |||||||| ||||| ||||| ||||||   ||||||| |||| |  ||||||||| |||||||||| ||||||||  | ||| |||||||||||||||||    
T  10819 gataggtaaacatccttaatatgtacattcctttgtaccactctagaaaatttcaattaaccaaatatatggtctaggtgactatattttttaagttgca 10720  T
Q  307 tgaccactattt 318  Q
    ||||||||||||    
T  10719 tgaccactattt 10708  T

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Target: scaffold0251; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 521
Target Start/End: Original strand, 10747 - 10805
Alignment:
Q  463 accatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaag 521  Q
    ||||||||||||||||| |||||||||  |||||| |||||||| ||||||| ||||||    
T  10747 accatatatttggttaattgaaattttctagagtggtacaaaggaatgtacatattaag 10805  T

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Target: scaffold0043 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 87112 - 87035
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||||||| | ||||||||||||||||| | ||||||||||||||| || ||||||||| ||||||||    
T  87112 atttatttggttaactaagtagaaaaatagtggtcacgtgtattttagttgcgtgaccacatttttcagtttctaaat 87035  T

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Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 112235 - 112158
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||| ||  |||||||||||||||||    
T  112235 atttatttagttaactaagtggaaaaatagtggtcacgtgcattttaattgcgtgaccacgtttttcagcttctaaat 112158  T

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Target: scaffold0126 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 434
Target Start/End: Original strand, 21549 - 21607
Alignment:
Q  376 gcgtgatcatatttttcagcttctaaatagtggtcacgcaactgaaaaaatgtggtcac 434  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21549 gcgtgaccacatttttcagcttctatatagtggtcacgcaactgaaaaaatgtggtcac 21607  T

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Target: scaffold0126; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 334
Target Start/End: Original strand, 21420 - 21545
Alignment:
Q  210 taggtagaca-tcttaatgtgtacaccgctttgtatcactttgaaaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatg 308  Q
    |||||||||| | |||||||||||| |  ||| || || ||| ||||||||||||||||||||| || ||||||||  | ||||| ||||||||||| ||    
T  21420 taggtagacacttttaatgtgtacatccatttataccattttaaaaaatttcagttaaccaaatatacggtctgtgtaagcatatattttaagttgcgtg 21519  T
Q  309 accactattttttcaaaatttatttg 334  Q
    |||| ||||||| || ||||||||||    
T  21520 accattatttttccagaatttatttg 21545  T

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Target: scaffold0126; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 21638 - 21575
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactat 316  Q
    ||||| |||||||||| ||| ||||||||||| ||||| ||||||| |||||| ||||||||||    
T  21638 aaaatctcagttaaccgaatatatggtctgtgtgaccacattttttcagttgcgtgaccactat 21575  T

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Target: scaffold0126; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 520
Target Start/End: Complemental strand, 21496 - 21433
Alignment:
Q  457 acacataccatatatttggttaactgaaatttttcagagtgatacaaagggatgtacacattaa 520  Q
    ||||| ||| |||||||||||||||||||||||| | | || || ||| |||||||||||||||    
T  21496 acacagaccgtatatttggttaactgaaattttttaaaatggtataaatggatgtacacattaa 21433  T

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Target: scaffold0213 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 25415 - 25338
Alignment:
Q  253 aaaatttcagttaaccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttcaaaattta 330  Q
    ||||||| |||||||||||| ||||||||||   |||| |||||| |||||| ||||||||||||||| |||||||||    
T  25415 aaaattttagttaaccaaatatatggtctgtataaccacatttttaaagttgtatgaccactatttttccaaaattta 25338  T

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Target: scaffold0291 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 5947 - 5870
Alignment:
Q  326 atttatttggttaactaaatggaaaaatagtggtcacgcgcattttagttgcgtgatcatatttttcagcttctaaat 403  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||||||||||  | || | |||||||||| |||||    
T  5947 atttatttggttaattaagtgcaaaaatagtggtcacgcgtattttagttgcgacaccacacttttcagcttttaaat 5870  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 500
Target Start/End: Complemental strand, 49492 - 49447
Alignment:
Q  455 tcacacataccatatatttggttaactgaaatttttcagagtgata 500  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  49492 tcacacataccatatatttggttaacttaaatttttcagaatgata 49447  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 142119 - 142063
Alignment:
Q  267 ccaaatttatggtctgtgggaccatattttttaagttgcatgaccactattttttca 323  Q
    |||||| || |||||||| ||||| |||| ||||| ||| |||||||||||||||||    
T  142119 ccaaatatacggtctgtgtgaccacatttgttaaggtgcgtgaccactattttttca 142063  T

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