View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18561_high_1 (Length: 409)

Name: NF18561_high_1
Description: NF18561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18561_high_1
NF18561_high_1
[»] chr4 (57 HSPs)
chr4 (8-169)||(36073459-36073620)
chr4 (8-168)||(21802115-21802278)
chr4 (8-168)||(46441953-46442114)
chr4 (8-168)||(22199370-22199529)
chr4 (8-166)||(9088979-9089138)
chr4 (8-168)||(47290175-47290336)
chr4 (8-168)||(53123140-53123301)
chr4 (8-169)||(44893535-44893697)
chr4 (8-168)||(7744907-7745068)
chr4 (8-168)||(36073056-36073221)
chr4 (8-168)||(44893008-44893169)
chr4 (8-168)||(10442582-10442745)
chr4 (8-168)||(31078614-31078775)
chr4 (8-168)||(50156374-50156534)
chr4 (13-168)||(2624951-2625107)
chr4 (8-166)||(24128348-24128507)
chr4 (8-168)||(49387682-49387844)
chr4 (8-168)||(4751555-4751717)
chr4 (13-158)||(23964269-23964416)
chr4 (68-168)||(33530479-33530579)
chr4 (8-137)||(30563318-30563448)
chr4 (8-171)||(17655539-17655704)
chr4 (71-168)||(11314046-11314144)
chr4 (68-168)||(37219801-37219902)
chr4 (8-168)||(37934736-37934897)
chr4 (70-168)||(42671840-42671939)
chr4 (78-166)||(24392854-24392942)
chr4 (73-167)||(44744607-44744698)
chr4 (95-169)||(25063368-25063443)
chr4 (76-169)||(36073255-36073349)
chr4 (92-164)||(33530676-33530749)
chr4 (92-164)||(10442777-10442850)
chr4 (92-164)||(31078807-31078880)
chr4 (92-164)||(49387876-49387949)
chr4 (92-164)||(2624841-2624914)
chr4 (92-164)||(7745100-7745173)
chr4 (92-164)||(21802310-21802383)
chr4 (92-164)||(22199265-22199338)
chr4 (92-164)||(24392671-24392744)
chr4 (92-164)||(36072951-36073024)
chr4 (92-164)||(46441848-46441921)
chr4 (92-164)||(47290070-47290143)
chr4 (92-162)||(42671675-42671746)
chr4 (92-164)||(53123034-53123108)
chr4 (92-138)||(17655461-17655507)
chr4 (92-164)||(4751450-4751523)
chr4 (92-129)||(9088910-9088947)
chr4 (92-164)||(24128243-24128316)
chr4 (92-164)||(36073354-36073427)
chr4 (92-164)||(37934929-37935002)
chr4 (92-129)||(44893201-44893238)
chr4 (92-129)||(44893466-44893503)
chr4 (92-126)||(23964453-23964487)
chr4 (92-126)||(50156566-50156600)
chr4 (8-57)||(33530596-33530644)
chr4 (8-57)||(36073650-36073699)
chr4 (92-155)||(36073731-36073795)
[»] chr8 (69 HSPs)
chr8 (8-166)||(20091598-20091757)
chr8 (8-166)||(34665491-34665649)
chr8 (8-168)||(26041908-26042069)
chr8 (8-168)||(37985851-37986011)
chr8 (8-169)||(17841644-17841806)
chr8 (8-170)||(3596834-3596997)
chr8 (8-169)||(25581033-25581195)
chr8 (8-168)||(6108028-6108189)
chr8 (8-168)||(40779924-40780085)
chr8 (8-168)||(15187669-15187830)
chr8 (13-168)||(1645759-1645916)
chr8 (8-169)||(30055626-30055787)
chr8 (13-166)||(38017048-38017201)
chr8 (8-169)||(42754836-42754998)
chr8 (68-169)||(10044518-10044619)
chr8 (8-168)||(32064854-32065016)
chr8 (68-167)||(14129029-14129128)
chr8 (68-166)||(24211169-24211267)
chr8 (76-168)||(1503638-1503730)
chr8 (13-143)||(8453948-8454078)
chr8 (8-156)||(35353150-35353299)
chr8 (69-166)||(37132477-37132575)
chr8 (80-168)||(31347571-31347659)
chr8 (8-157)||(39772608-39772757)
chr8 (8-156)||(32393967-32394114)
chr8 (78-168)||(7022159-7022249)
chr8 (8-169)||(24844654-24844815)
chr8 (68-137)||(41819594-41819663)
chr8 (72-165)||(3890412-3890506)
chr8 (30-168)||(30834850-30834989)
chr8 (78-168)||(7017653-7017743)
chr8 (8-58)||(24211459-24211509)
chr8 (8-128)||(27835288-27835409)
chr8 (92-164)||(27782105-27782178)
chr8 (92-164)||(32064749-32064822)
chr8 (92-164)||(34665386-34665459)
chr8 (92-164)||(17841838-17841911)
chr8 (92-164)||(20091789-20091862)
chr8 (92-137)||(31347770-31347815)
chr8 (92-164)||(40780117-40780190)
chr8 (92-156)||(42755030-42755095)
chr8 (92-138)||(7017853-7017899)
chr8 (92-165)||(24844847-24844920)
chr8 (8-58)||(41819684-41819734)
chr8 (92-164)||(1645953-1646026)
chr8 (92-137)||(3597029-3597074)
chr8 (92-137)||(7022010-7022055)
chr8 (92-164)||(8453838-8453911)
chr8 (92-164)||(14128868-14128941)
chr8 (92-164)||(15187564-15187637)
chr8 (92-137)||(15972865-15972910)
chr8 (92-164)||(24211541-24211614)
chr8 (92-164)||(26042104-26042177)
chr8 (92-164)||(27835441-27835514)
chr8 (92-164)||(32393862-32393935)
chr8 (92-164)||(35353045-35353118)
chr8 (92-164)||(37986043-37986116)
chr8 (92-129)||(39772789-39772826)
chr8 (92-156)||(30835035-30835099)
chr8 (97-164)||(37132651-37132719)
chr8 (93-156)||(38016983-38017047)
chr8 (106-156)||(1886621-1886672)
chr8 (92-143)||(6108221-6108272)
chr8 (28-58)||(7017771-7017801)
chr8 (28-58)||(7022107-7022137)
chr8 (92-137)||(3817918-3817963)
chr8 (92-137)||(3890605-3890649)
chr8 (92-129)||(25581227-25581264)
chr8 (92-156)||(41819766-41819831)
[»] scaffold0085 (2 HSPs)
scaffold0085 (8-169)||(47959-48120)
scaffold0085 (92-164)||(47854-47927)
[»] chr7 (45 HSPs)
chr7 (8-169)||(24395081-24395242)
chr7 (8-168)||(3962088-3962248)
chr7 (8-168)||(45637821-45637981)
chr7 (8-166)||(4974532-4974691)
chr7 (8-168)||(48880722-48880883)
chr7 (8-168)||(42611920-42612081)
chr7 (8-169)||(30848678-30848840)
chr7 (68-168)||(34483008-34483108)
chr7 (15-168)||(15577642-15577799)
chr7 (68-168)||(15329444-15329544)
chr7 (68-168)||(35445567-35445667)
chr7 (13-168)||(42696197-42696354)
chr7 (68-169)||(35876414-35876515)
chr7 (84-168)||(25167651-25167735)
chr7 (68-159)||(29737314-29737406)
chr7 (78-167)||(37476876-37476965)
chr7 (8-166)||(20009895-20010054)
chr7 (78-168)||(18037157-18037247)
chr7 (78-168)||(15238564-15238654)
chr7 (169-219)||(1807701-1807751)
chr7 (362-409)||(1807894-1807941)
chr7 (92-164)||(4974723-4974796)
chr7 (92-164)||(42611815-42611888)
chr7 (92-164)||(45637716-45637789)
chr7 (95-164)||(15577841-15577911)
chr7 (104-169)||(36790270-36790336)
chr7 (92-164)||(15329277-15329350)
chr7 (92-164)||(34482839-34482912)
chr7 (102-171)||(40880638-40880706)
chr7 (92-164)||(48880915-48880988)
chr7 (8-58)||(25167756-25167806)
chr7 (8-58)||(29737248-29737298)
chr7 (92-137)||(15238414-15238459)
chr7 (92-129)||(35444598-35444635)
chr7 (8-55)||(35444667-35444714)
chr7 (13-55)||(15329387-15329429)
chr7 (8-58)||(34482944-34482993)
chr7 (28-58)||(37476986-37477016)
chr7 (92-164)||(3961983-3962056)
chr7 (92-137)||(18037010-18037055)
chr7 (97-134)||(20953112-20953149)
chr7 (92-164)||(25167838-25167911)
chr7 (92-164)||(29737143-29737216)
chr7 (92-164)||(36790454-36790527)
chr7 (92-164)||(37477068-37477141)
[»] chr6 (37 HSPs)
chr6 (13-168)||(28675262-28675418)
chr6 (8-169)||(2309217-2309379)
chr6 (8-168)||(17175816-17175977)
chr6 (8-171)||(18365366-18365529)
chr6 (8-171)||(18370630-18370793)
chr6 (8-168)||(33696805-33696967)
chr6 (8-168)||(17705264-17705421)
chr6 (8-169)||(33695120-33695283)
chr6 (8-168)||(23290876-23291040)
chr6 (8-166)||(6031537-6031697)
chr6 (28-168)||(32702334-32702475)
chr6 (13-137)||(18889470-18889594)
chr6 (68-168)||(29693615-29693716)
chr6 (78-166)||(11548386-11548474)
chr6 (8-134)||(8515556-8515682)
chr6 (8-99)||(9752110-9752201)
chr6 (31-127)||(6127408-6127506)
chr6 (102-167)||(34238883-34238948)
chr6 (92-164)||(33695315-33695388)
chr6 (92-164)||(33696700-33696773)
chr6 (114-169)||(2121003-2121059)
chr6 (8-58)||(25987039-25987089)
chr6 (8-58)||(29693547-29693597)
chr6 (90-169)||(582521-582602)
chr6 (92-164)||(6127279-6127352)
chr6 (92-137)||(11548576-11548621)
chr6 (92-164)||(23291072-23291145)
chr6 (92-137)||(9752233-9752278)
chr6 (92-164)||(17176009-17176082)
chr6 (92-164)||(17705453-17705526)
chr6 (92-164)||(18365561-18365634)
chr6 (92-164)||(18370825-18370898)
chr6 (92-164)||(25986934-25987007)
chr6 (92-164)||(28675152-28675225)
chr6 (92-164)||(18889685-18889757)
chr6 (102-164)||(8515723-8515786)
chr6 (92-129)||(32702245-32702282)
[»] chr5 (38 HSPs)
chr5 (8-168)||(14138777-14138937)
chr5 (8-170)||(8145484-8145645)
chr5 (8-169)||(33584123-33584285)
chr5 (8-168)||(4892311-4892472)
chr5 (8-169)||(6043306-6043467)
chr5 (8-168)||(25398347-25398508)
chr5 (28-168)||(3521802-3521942)
chr5 (8-165)||(12850910-12851069)
chr5 (8-174)||(37321582-37321749)
chr5 (13-170)||(2477750-2477908)
chr5 (8-167)||(3362887-3363048)
chr5 (8-147)||(11360947-11361087)
chr5 (8-169)||(38899519-38899682)
chr5 (78-168)||(22912852-22912942)
chr5 (68-168)||(12614532-12614633)
chr5 (8-126)||(4433845-4433963)
chr5 (8-137)||(31640767-31640896)
chr5 (78-168)||(17545477-17545567)
chr5 (92-164)||(12614721-12614794)
chr5 (92-164)||(22913042-22913115)
chr5 (76-131)||(13664737-13664792)
chr5 (92-164)||(2477640-2477713)
chr5 (92-164)||(6043499-6043572)
chr5 (92-156)||(8145387-8145452)
chr5 (92-164)||(11361119-11361192)
chr5 (29-169)||(27481952-27482096)
chr5 (92-137)||(31640928-31640973)
chr5 (92-164)||(3362782-3362855)
chr5 (92-164)||(4433995-4434068)
chr5 (92-164)||(4892206-4892279)
chr5 (92-137)||(17545673-17545718)
chr5 (92-164)||(25398242-25398315)
chr5 (92-164)||(38899714-38899787)
chr5 (68-128)||(36880148-36880213)
chr5 (92-164)||(12850805-12850878)
chr5 (92-156)||(14138680-14138745)
chr5 (92-164)||(33584317-33584390)
chr5 (101-137)||(10458429-10458465)
[»] chr2 (41 HSPs)
chr2 (8-169)||(9293369-9293532)
chr2 (8-169)||(33380316-33380478)
chr2 (8-171)||(35160866-35161032)
chr2 (8-168)||(23267857-23268018)
chr2 (8-165)||(31174633-31174790)
chr2 (8-169)||(10661996-10662159)
chr2 (8-169)||(7475302-7475464)
chr2 (8-164)||(3989185-3989342)
chr2 (8-168)||(13354955-13355118)
chr2 (68-168)||(22592880-22592983)
chr2 (78-168)||(43331092-43331182)
chr2 (13-169)||(9723519-9723678)
chr2 (68-137)||(16767288-16767357)
chr2 (8-137)||(21936190-21936321)
chr2 (78-166)||(21393483-21393570)
chr2 (78-129)||(34320991-34321042)
chr2 (8-168)||(40262531-40262692)
chr2 (92-164)||(14941354-14941427)
chr2 (14-128)||(14941199-14941317)
chr2 (78-147)||(37335824-37335894)
chr2 (92-164)||(9293564-9293637)
chr2 (13-58)||(27847746-27847791)
chr2 (92-164)||(10661891-10661964)
chr2 (92-164)||(21936085-21936158)
chr2 (92-164)||(23268050-23268123)
chr2 (92-156)||(31174822-31174887)
chr2 (92-164)||(35160761-35160834)
chr2 (92-164)||(43330916-43330989)
chr2 (8-58)||(16767378-16767428)
chr2 (92-138)||(27847663-27847709)
chr2 (123-169)||(39819272-39819318)
chr2 (92-164)||(9723409-9723482)
chr2 (93-138)||(37335744-37335789)
chr2 (92-126)||(3989119-3989153)
chr2 (28-58)||(21393594-21393624)
chr2 (28-58)||(43331041-43331071)
chr2 (92-164)||(7475496-7475569)
chr2 (92-156)||(13354858-13354923)
chr2 (92-137)||(21393676-21393721)
chr2 (92-164)||(33380211-33380284)
chr2 (8-56)||(22591591-22591639)
[»] scaffold0096 (2 HSPs)
scaffold0096 (8-175)||(41120-41287)
scaffold0096 (92-164)||(41015-41088)
[»] chr1 (42 HSPs)
chr1 (8-168)||(51737614-51737775)
chr1 (8-167)||(40215097-40215257)
chr1 (8-168)||(19015513-19015674)
chr1 (8-168)||(25463785-25463946)
chr1 (8-168)||(44094807-44094967)
chr1 (8-168)||(6883596-6883757)
chr1 (8-168)||(36966503-36966664)
chr1 (8-168)||(41876237-41876398)
chr1 (8-170)||(37821627-37821790)
chr1 (8-168)||(20304925-20305087)
chr1 (8-168)||(3559726-3559887)
chr1 (32-169)||(25973542-25973678)
chr1 (68-168)||(18404618-18404718)
chr1 (8-171)||(9910083-9910249)
chr1 (78-169)||(32000060-32000151)
chr1 (78-168)||(33786426-33786516)
chr1 (78-166)||(40273888-40273976)
chr1 (71-166)||(44690818-44690914)
chr1 (92-170)||(19722892-19722970)
chr1 (8-168)||(27523050-27523211)
chr1 (92-175)||(33786623-33786706)
chr1 (96-167)||(52064373-52064445)
chr1 (68-169)||(22157332-22157433)
chr1 (68-131)||(52329445-52329508)
chr1 (92-164)||(16045786-16045859)
chr1 (92-164)||(40214992-40215065)
chr1 (92-164)||(40273706-40273779)
chr1 (92-164)||(25463680-25463753)
chr1 (92-164)||(44094702-44094775)
chr1 (92-143)||(6883513-6883564)
chr1 (8-58)||(44690935-44690985)
chr1 (92-164)||(9910281-9910354)
chr1 (76-168)||(10167577-10167670)
chr1 (92-164)||(19015408-19015481)
chr1 (92-164)||(32000255-32000328)
chr1 (92-164)||(36966696-36966769)
chr1 (92-164)||(37821822-37821895)
chr1 (28-58)||(32000173-32000203)
chr1 (28-58)||(40273831-40273861)
chr1 (92-164)||(3559621-3559694)
chr1 (92-164)||(18404446-18404519)
chr1 (92-156)||(44691017-44691082)
[»] chr3 (51 HSPs)
chr3 (13-169)||(19650694-19650850)
chr3 (8-168)||(22426140-22426300)
chr3 (23-169)||(30385525-30385671)
chr3 (8-168)||(3137209-3137370)
chr3 (8-166)||(33145821-33145980)
chr3 (8-168)||(6041993-6042147)
chr3 (8-168)||(33113902-33114064)
chr3 (8-169)||(2754826-2754990)
chr3 (8-172)||(3089526-3089693)
chr3 (8-168)||(3456173-3456334)
chr3 (8-168)||(3574321-3574482)
chr3 (8-167)||(8320378-8320540)
chr3 (8-170)||(37522162-37522325)
chr3 (8-169)||(47738214-47738383)
chr3 (8-168)||(37216848-37217009)
chr3 (68-168)||(34482683-34482783)
chr3 (68-169)||(26612916-26613018)
chr3 (28-168)||(36864827-36864967)
chr3 (8-168)||(48161014-48161176)
chr3 (71-168)||(40328004-40328102)
chr3 (78-175)||(9796817-9796914)
chr3 (68-156)||(33839705-33839794)
chr3 (68-166)||(42921295-42921394)
chr3 (78-168)||(8361834-8361924)
chr3 (8-169)||(24343656-24343821)
chr3 (78-168)||(41224414-41224504)
chr3 (8-128)||(42297973-42298092)
chr3 (13-153)||(41883031-41883174)
chr3 (76-167)||(46919072-46919164)
chr3 (8-96)||(42297463-42297549)
chr3 (8-58)||(30385120-30385170)
chr3 (92-164)||(3137402-3137475)
chr3 (92-164)||(3574515-3574588)
chr3 (92-164)||(6041888-6041961)
chr3 (92-137)||(8362033-8362078)
chr3 (92-164)||(33113797-33113870)
chr3 (92-164)||(33145717-33145789)
chr3 (8-50)||(34482824-34482866)
chr3 (8-58)||(40327934-40327984)
chr3 (92-164)||(2754721-2754794)
chr3 (92-164)||(3456068-3456141)
chr3 (92-137)||(9797017-9797062)
chr3 (92-164)||(11347272-11347345)
chr3 (92-164)||(37217041-37217114)
chr3 (92-137)||(41883211-41883256)
chr3 (92-164)||(48160909-48160982)
chr3 (92-126)||(3089460-3089494)
chr3 (92-164)||(30385015-30385088)
chr3 (92-164)||(34482898-34482971)
chr3 (29-58)||(41224363-41224392)
chr3 (92-156)||(47738117-47738182)
[»] scaffold0228 (6 HSPs)
scaffold0228 (8-168)||(26045-26206)
scaffold0228 (8-168)||(16093-16254)
scaffold0228 (92-156)||(8414-8479)
scaffold0228 (8-99)||(8511-8603)
scaffold0228 (92-156)||(15996-16061)
scaffold0228 (92-156)||(25948-26013)
[»] scaffold0204 (2 HSPs)
scaffold0204 (8-169)||(4505-4667)
scaffold0204 (92-164)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (8-172)||(11730-11895)
scaffold0178 (92-164)||(11625-11698)
[»] scaffold0471 (2 HSPs)
scaffold0471 (8-166)||(12951-13110)
scaffold0471 (92-164)||(12846-12919)
[»] scaffold0041 (1 HSPs)
scaffold0041 (102-171)||(85577-85645)
[»] scaffold0665 (1 HSPs)
scaffold0665 (92-164)||(3072-3145)


Alignment Details
Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 36073459 - 36073620
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  36073459 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 36073558  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  36073559 attgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 36073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 21802278 - 21802115
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgg---gtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| |||||||||| ||| |||||||||||||||||||||   ||||||||||         ||||||| |||||||||||||||||||||||||||||    
T  21802278 ccaataaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtg 21802179  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21802178 attattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 46441953 - 46442114
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  46441953 ccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 46442052  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  46442053 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 22199370 - 22199529
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  22199370 ccaataaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 22199468  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22199469 attgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 9088979 - 9089138
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| | ||||    
T  9088979 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgat 9089078  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  9089079 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 47290175 - 47290336
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          |||||||  ||||||||||||||||||||||| ||||||    
T  47290175 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgat 47290274  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  47290275 tattgtaccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 53123140 - 53123301
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| | ||||    
T  53123140 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgat 53123239  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  53123240 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 44893535 - 44893697
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  44893535 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 44893634  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  44893635 tattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 44893697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 7745068 - 7744907
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||  ||||||||||||| |||||||||| ||||||    
T  7745068 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgat 7744969  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  7744968 tattgtgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 36073056 - 36073221
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaaggttaataaatgagactgaaatctaaggg 102  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||              ||||||| |||||||||||||||||||||||| ||    
T  36073056 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaagg 36073155  T
Q  103 tgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36073156 tggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcc 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 44893169 - 44893008
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  44893169 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 44893070  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  44893069 tattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 10442745 - 10442582
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaaggttaa-taaatgagactgaaatctaagggtg 104  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||           |  ||||| |||| |||||||||||||||||||| ||||    
T  10442745 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtg 10442646  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10442645 attattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 31078775 - 31078614
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||          ||||||| ||||||||||||| |||||||||| | ||||    
T  31078775 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgat 31078676  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  31078675 tattgtgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 50156534 - 50156374
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||||| ||||    
T  50156534 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaagg-tgat 50156436  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||| || |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  50156435 tattatgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 50156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2624951 - 2625107
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattattg 111  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 2625050  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  2625051 tgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcc 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 24128348 - 24128507
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||| ||| ||    
T  24128348 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaat 24128447  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  24128448 tattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 49387844 - 49387682
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||  ||||||||||||||||||||| |||||||||           ||||||| |||||||||||||||||||||||| |||||    
T  49387844 ccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 49387745  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  49387744 ttattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttcc 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 4751555 - 4751717
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||| |||  ||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||     
T  4751555 ccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtgg 4751654  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||    
T  4751655 ttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 23964416 - 23964269
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattatt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||| |||||||||| | ||||||||    
T  23964416 aaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattatt 23964317  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcatttttgatatct 158  Q
     ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  23964316 atgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  168 c 168  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 30563318 - 30563448
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||| |||||    
T  30563318 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgat 30563417  T
Q  107 tattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||| |||||||||||||||||||||||    
T  30563418 tattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 17655539 - 17655704
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttat--gtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||||  |||         |||||||||||||||||||||||||||||||| ||| |    
T  17655539 ccaataaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtatttttttt-atgaaaggttaataaatgagactgaaatctaaaggtaa 17655637  T
Q  106 ttattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttccaat 171  Q
    ||||| || |||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||||    
T  17655638 ttattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttttcaat 17655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 11314144 - 11314046
Alignment:
Q  71 aaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 37219801 - 37219902
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    ||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  167 cc 168  Q
    ||    
T  37219901 cc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 37934897 - 37934736
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| |||  ||||||| ||||| |||||| |||||||||         ||||||||||||||||||||| ||||||||||||||||||    
T  37934897 ccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgatt 37934798  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||| ||||| ||||||||||||| ||||||||| |  | ||||||| ||||||||    
T  37934797 attgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  70 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||| |||||||||| |||||||||  |||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||   |||||||| |||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 44744607 - 44744698
Alignment:
Q  73 aggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||||||| |||||||||||||||| | ||||||| | ||||||||||||||||||   | |||||||||||||||||||||| |||||||    
T  44744607 aggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 25063443 - 25063368
Alignment:
Q  95 tctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    |||||| ||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcca 25063368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 36073349 - 36073255
Alignment:
Q  76 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||| ||||||||||||||| || |||||| || ||| |||||||| |||||||||| ||||||||||||||  ||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcca 36073255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| || ||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| |||||||| || ||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||  || ||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||| | |||||| || ||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagca 162  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt--ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  | |||||| || ||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| || ||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37934929 - 37935002
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttga-atctttcttataaaatcatttttgatatctagcatt 164  Q
    |||||||||||||| |||| | ||||||||||||||| || ||| | |||||||| |||||||||| |||||||    
T  37934929 aaatctaagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcatt 37935002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 44893503 - 44893466
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaa 44893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 23964453 - 23964487
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||| |||||||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattctt 23964487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 50156566 - 50156600
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||| |||||||||||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattctt 50156600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 33530644 - 33530596
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgt 57  Q
    |||| ||||| |||||||| ||||||||||| ||||||||||||||||||    
T  33530644 ccaataaaatttcagcctggccggaaatcat-gggtggtgggtgttatgt 33530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 36073699 - 36073650
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgt 57  Q
    |||| ||||||||||  || |||||||||||||||||||| |||||||||    
T  36073699 ccaataaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgata 155  Q
    ||||||||  ||||||||| || |||||||||||| |||||||||| |||||||| || ||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 20091757 - 20091598
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  20091757 ccaataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 20091658  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20091657 tattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 34665491 - 34665649
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||| || ||| ||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  34665491 ccaataaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgatt 34665590  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34665591 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 26042069 - 26041908
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  26042069 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 26041970  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  26041969 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 37986011 - 37985851
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||         ||||||| |||||||||| ||||||||||||| |||||||    
T  37986011 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgatt 37985912  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37985911 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 17841806 - 17841644
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  17841806 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 17841707  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17841706 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 17841644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 3596997 - 3596834
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  3596997 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 3596898  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    ||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  3596897 tattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttccaa 3596834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 25581195 - 25581033
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  25581195 ccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 25581096  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  25581095 tattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 25581033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 6108189 - 6108028
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  6108189 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgat 6108090  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  6108089 tattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 40780085 - 40779924
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  40780085 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 40779986  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  40779985 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 15187669 - 15187830
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||| |||||| ||||||||||||| |||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||    
T  15187669 ccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 15187768  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  15187769 tattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 1645916 - 1645759
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattatt 110  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 1645817  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  1645816 gtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcc 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 30055626 - 30055787
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||          ||||||||||||||||||||||| |||||||||||||||    
T  30055626 ccaataaaatctcagc-tggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgat 30055724  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  30055725 tattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcca 30055787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 38017048 - 38017201
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtga-ttattg 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||| ||| | ||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38017147 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 42754998 - 42754836
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  42754998 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 42754899  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  42754898 tattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 42754836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 10044518 - 10044619
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  168 ca 169  Q
    ||    
T  10044618 ca 10044619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 32064854 - 32065016
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||| || |||||||||||||           ||||||| |||||||||||||||||||||||| |||||    
T  32064854 ccaataaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 32064953  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  32064954 ttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 1503730 - 1503638
Alignment:
Q  76 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 8453948 - 8454078
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgt 112  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8454047  T
Q  113 gccatgtcattcttgaatctttcttataaaa 143  Q
    ||||||||||||||||||  |||||||||||    
T  8454048 gccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 35353150 - 35353299
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||          ||||||| ||||||||||||| | |||| ||| ||||||    
T  35353150 ccaataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgat 35353249  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatat 156  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  35353250 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  69 tgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 80 - 168
Target Start/End: Complemental strand, 31347659 - 31347571
Alignment:
Q  80 taaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 39772757 - 39772608
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||| | |||||||||||||| ||||||||||||||||          ||||||| |||||||| || |||||||||||| ||||||    
T  39772757 ccaataaaatctcagccag-ccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgat 39772659  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatc 157  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  39772658 tattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 32393967 - 32394114
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||  ||| ||||||||||||||| |||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  32393967 ccaataaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 32394066  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatat 156  Q
    |||||| |||||||||||| ||| ||| ||||||||||||| |||||||    
T  32394067 attgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 24844815 - 24844654
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||||  ||||||||| |||||||||||||||||||         ||||||||||||||| | ||| | ||||||||| ||||||    
T  24844815 ccaataaaatctcatcctgattggaaatcatagggtggtgggtgttatgtatttttttt-atgaaaggttaataattaagattaaaatctaagagtgatt 24844717  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    ||| ||||||| ||||||| |||||||||| ||||||||||| |||||||||| |||||||||    
T  24844716 attttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttcca 24844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 41819663 - 41819594
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41819663 atgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 3890506 - 3890412
Alignment:
Q  72 aaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattt 165  Q
    ||||||||||||| ||| | |||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  3890506 aaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 30834989 - 30834850
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||||||||||||||||||||||||         || ||| ||| | |||| | ||||||||||||||||| ||||| || |||||||||||| ||    
T  30834989 ggaaatcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaa 30834890  T
Q  130 tctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| ||||||||||| |||||||||| ||||||||    
T  30834889 tctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| |||||||| |   ||||||||||| ||| ||||||   |||||||| |||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 24211509 - 24211459
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  24211509 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 27835409 - 27835288
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||   ||||||||||||| ||||||||||||||||          || |||||||||||||||||| |||||||||||| ||||    
T  27835409 ccaataaaatctcagcctagacggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgat 27835310  T
Q  107 tattgtgccatgtcattcttga 128  Q
    ||||||| ||| ||||| ||||    
T  27835309 tattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||  || ||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||  || ||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 7017853 - 7017899
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttctta 7017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattt 165  Q
    ||||||||||||||||||| || |||||||||||||||| |||||| |||||||  || ||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 41819734 - 41819684
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||| | |||||||||||||||||||| ||||||||||    
T  41819734 ccaataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 1645953 - 1646026
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||| ||||| ||  |||||| |||||||| || ||||||| |||||||    
T  1645953 aaatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcatt 1646026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 3597029 - 3597074
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||    
T  3597029 aaatctaagggtaattattctgccatgtcattcttgaaactttctt 3597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 7022055 - 7022010
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttctt 7022010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||| || |||||||| || ||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||||| |||||| |||||| |||||||||||  |||||| |||||||| || ||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 24211541 - 24211614
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||| ||||||||||  |||||| |||||||| || ||||||| |||||||    
T  24211541 aaatttaagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcatt 24211614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| || || |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| | ||||||||||||||||| |||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt-gaatctttcttataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||||||||||||  ||| ||| | |||||||| || ||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 39772789 - 39772826
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaa 39772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatat 156  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||   |||||||| || |||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 37132651 - 37132719
Alignment:
Q  97 taagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||| |||||||| ||||||||||||||| ||| |||||| |||||||  |||||||||| |||||||    
T  37132651 taaggatgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcatt 37132719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 38017047 - 38016983
Alignment:
Q  93 aatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    |||| ||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  106 ttattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 6108221 - 6108272
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaa 143  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| ||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaa 6108272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 7017801 - 7017771
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  7017801 ccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 7022107 - 7022137
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  7022107 ccggaaatcatggggtggtgggtgttatgta 7022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 3817918 - 3817963
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| || ||||| |||||||||| ||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttctt 3817963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 3890605 - 3890649
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  3890605 aaatctaagg-tgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 41819766 - 41819831
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| |||||| |||||||| || | ||||| |||||||| || |||||||    
T  41819766 aaatctaagggtgattattctgccatatcattcttaaaacattcttgataaaatctttcttgatat 41819831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 47959 - 48120
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| | |||||    
T  47959 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgatt 48058  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48059 attgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 48120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 24395081 - 24395242
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  24395081 ccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgatt 24395180  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  24395181 attgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttcca 24395242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 3962088 - 3962248
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  3962088 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 3962187  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  3962188 attgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcc 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 45637821 - 45637981
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| ||||||||||||||||||||| |||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  45637821 ccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 45637920  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  45637921 attgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 4974691 - 4974532
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||  || |||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  4974691 ccaataaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 4974592  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  4974591 tattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 48880883 - 48880722
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||| ||||||||||||  |||||    
T  48880883 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgat 48880784  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  48880783 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 42611920 - 42612081
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||||          ||||||| ||||||||| |||||||||||||| ||||||    
T  42611920 ccaataaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgat 42612019  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  42612020 tattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 30848678 - 30848840
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| | ||||||||||||||          ||||||| |||||||||||||||||||| ||| ||||||    
T  30848678 ccaataaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgat 30848777  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  30848778 tattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttcca 30848840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  168 c 168  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 15577799 - 15577642
Alignment:
Q  15 aatctcagcctgaccggaaatcatggggtggtgggtgttatgta----nnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattatt 110  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||             || |||| |||||||||||||||||||||||| ||||||||||    
T  15577799 aatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 15577700  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  15577699 gtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 15329444 - 15329544
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  168 c 168  Q
    |    
T  15329544 c 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 35445567 - 35445667
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  168 c 168  Q
    |    
T  35445667 c 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 42696197 - 42696354
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattattg 111  Q
    ||||||||| |||| |||||||||| |||||||||| |||||||||          |||||| |||||||||||||||||||||||||||||||||||||    
T  42696197 aaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattg 42696296  T
Q  112 tgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    | ||||||||||||||||| ||| || ||||||||||| |||||||||| ||||||||    
T  42696297 taccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 35876414 - 35876515
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||  || ||||||||||||||||| ||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  168 ca 169  Q
    ||    
T  35876514 ca 35876515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  84 tgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatcta 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||   |||||||| ||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 20010054 - 20009895
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||| |||||||| |||||||  |||||||||||||         || |||||||||||||||||||| |||||||||  |||||    
T  20010054 ccaataaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgatt 20009955  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||| |||||||||||||||||||| || |||||||||||  ||||||||| ||||||    
T  20009954 attgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||   |||||||| |||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||   |||||||| |||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 1807701 - 1807751
Alignment:
Q  169 aataaaatgacaaaattggatacaaaaatagaccccaaatttatgggcgac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1807701 aataaaatgacaaaattggatacaaaaatagaccccaaatttatgggcgac 1807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 362 - 409
Target Start/End: Original strand, 1807894 - 1807941
Alignment:
Q  362 cctcatcatgtctaaaaacaatgatattgtaacatcaaatctttgttt 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1807894 cctcatcatgtctaaaaacaatgatattgtaacatcaaatctttgttt 1807941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  95 tctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 36790336 - 36790270
Alignment:
Q  104 gattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||| |||||||||||||||||||| || |||||| |||| ||||||| ||||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcca 36790270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 40880706 - 40880638
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    |||||||||||||||||| ||| || ||||||||  || |||||||| ||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttccaat 40880638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 25167806 - 25167756
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25167806 ccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29737248 - 29737298
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| ||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  29737248 ccaataaaatctcaacctgaccggaaatcatggggtagtgggagttatgta 29737298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 35444635 - 35444598
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaa 35444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 35444667 - 35444714
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttat 55  Q
    |||| |||||||||||||| ||| |||||||||| |||||||||||||    
T  35444667 ccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15329387 - 15329429
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttat 55  Q
    |||||||||| ||| |||||||||||||||||||| |||||||    
T  15329387 aaaatctcagactggccggaaatcatggggtggtgagtgttat 15329429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34482944 - 34482993
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  34482944 ccaataaaatctcagtctggccggaaatcat-gggtggtgggtgttatgta 34482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 37477016 - 37476986
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  37477016 ccggaaatcatggggtggtgggtgttatgta 37476986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| || |||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 18037055 - 18037010
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttctt 18037010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 20953112 - 20953149
Alignment:
Q  97 taagggtgattattgtgccatgtcattcttgaatcttt 134  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  20953112 taagggtgattattttgccatatcattcttgaatcttt 20953149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 25167838 - 25167911
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 29737216 - 29737143
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| | ||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 36790454 - 36790527
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| ||||||| |||||| ||||||||||||||| ||| |||||| |||||| | || ||||||| |||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37477068 - 37477141
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| ||||| |||||||| ||||||||||||||| ||| |||||| | |||||| || ||||||| |||||||    
T  37477068 aaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 28675262 - 28675418
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattattg 111  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  28675262 aaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattg 28675361  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28675362 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 28675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 2309379 - 2309217
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||| || |||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  2309379 ccaataaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgat 2309280  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  2309279 tattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttcca 2309217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 17175977 - 17175816
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  17175977 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 17175878  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17175877 tattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 18365529 - 18365366
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  18365529 ccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 18365430  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18365429 attgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttccaat 18365366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 18370793 - 18370630
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  18370793 ccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 18370694  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18370693 attgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttccaat 18370630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 33696805 - 33696967
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||    
T  33696805 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtga 33696904  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33696905 ttattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcc 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 17705421 - 17705264
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||    
T  17705421 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt--atgaaaggttaataaatgagactgaaatctaagg-tgatt 17705325  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17705324 attgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 33695283 - 33695120
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||    
T  33695283 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtga 33695184  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  33695183 ttattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttcca 33695120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 23291040 - 23290876
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaaggttaataaatgagactgaaatctaagggt 103  Q
    |||| |||||||||||||| || |||||||||||||| |||||||||||||             ||||||| |||||||||||||||||||||||| |||    
T  23291040 ccaataaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggt 23290941  T
Q  104 gattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23290940 aattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 6031697 - 6031537
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||           || |||| |||||||||||||||||||||||| |||||    
T  6031697 ccaataaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtga 6031598  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| || |||||    
T  6031597 ttattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 32702334 - 32702475
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||| |||||||          ||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  32702334 ccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattctt 32702433  T
Q  127 gaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  32702434 gaatttttcttataaaatcattcttgatatctagcattttcc 32702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 18889594 - 18889470
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgt 112  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  18889594 aaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18889495  T
Q  113 gccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| |||||    
T  18889494 gccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 29693615 - 29693716
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  167 cc 168  Q
    ||    
T  29693715 cc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||| |||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 8515682 - 8515556
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||         |||||| |||||||||| ||||||||||||||| ||||||    
T  8515682 ccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgatt 8515583  T
Q  108 attgtgccatgtcattcttgaatcttt 134  Q
    ||| | |||||||||| || |||||||    
T  8515582 attctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 9752201 - 9752110
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaa 99  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||||||||    
T  9752201 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 6127408 - 6127506
Alignment:
Q  31 gaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttg 127  Q
    ||||||||||||||||||||||||||||         ||  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6127408 gaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 2121059 - 2121003
Alignment:
Q  114 ccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcca 2121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 25987039 - 25987089
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  25987039 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 29693547 - 29693597
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  29693547 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Complemental strand, 582602 - 582521
Alignment:
Q  90 tgaaatctaagggtgattattgtgcc-atgtcattcttgaatctttctta-taaaatcatttttgatatctagcattttcca 169  Q
    |||||||||| |||||||||| |||| || |||||||| ||| ||||||| |||||||||| |||||||||| |||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcca 582521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  ||| || |||||||| || ||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttg-aatctttcttataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||| | |||||||| || ||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttg-aatctttcttataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||| | |||||||| || ||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25987007 - 25986934
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||| ||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  25987007 aaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||||||||||||  | |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatt 164  Q
    |||||||||||| |||||| ||||||||||||||||||  ||||||   ||||| || ||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||||| || ||||||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 32702282 - 32702245
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  32702282 aaatctaagggtgattattctgccatatcattcttgaa 32702245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 6e-53; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 14138777 - 14138937
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||| |||||||||| |||||||    
T  14138777 ccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgatt 14138876  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  14138877 attgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 8145484 - 8145645
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  8145484 ccaataaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 8145582  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8145583 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccaa 8145645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 33584285 - 33584123
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  33584285 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 33584186  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33584185 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 33584123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 4892311 - 4892472
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         | |||||| |||||||||||||||||||||||| ||||||    
T  4892311 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgat 4892410  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  4892411 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 6043467 - 6043306
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  6043467 ccaataaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 6043368  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  6043367 attgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 6043306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 25398347 - 25398508
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  25398347 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 25398446  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  25398447 tattgtgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 3521942 - 3521802
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttg 127  Q
    |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  3521942 ccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctta 3521843  T
Q  128 aatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||| ||||||||||||||||| |||||||||||||||||||    
T  3521842 aatttttcttataaaatcattcttgatatctagcattttcc 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 12850910 - 12851069
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||     
T  12850910 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtgg 12851009  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattt 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  12851010 ttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 37321749 - 37321582
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||  |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  37321749 ccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgat 37321650  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaataaa 174  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  37321649 tattgtgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttcctataaa 37321582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 2477750 - 2477908
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgattattg 111  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||| |||||||||||||| |||||| ||||    
T  2477750 aaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattg 2477849  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  2477850 tgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttccaa 2477908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3362887 - 3363048
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||| ||||     
T  3362887 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgg 3362986  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  3362987 ttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 11361087 - 11360947
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||| ||| |||||||||| | ||||    
T  11361087 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgat 11360988  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcat 147  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11360987 tattgtgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 38899682 - 38899519
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| ||| |||||||||||||||||||||||| ||          ||||||| |||||||||||||||||||||||| |||| |    
T  38899682 ccaataaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggt 38899583  T
Q  107 tattgtgccatgtcattcttgaa-tctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||    
T  38899582 tattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcca 38899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 12614633 - 12614532
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  167 cc 168  Q
    ||    
T  12614533 cc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 4433963 - 4433845
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||         ||||||| ||||||||| |||||||||||||| |||||||    
T  4433963 ccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgatt 4433864  T
Q  108 attgtgccatgtcattctt 126  Q
    |||||||||||||||||||    
T  4433863 attgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 31640896 - 31640767
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||| |||    ||||||| |  ||||    
T  31640896 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgatt 31640797  T
Q  108 attgtgccatgtcattcttgaatctttctt 137  Q
    ||| ||||||||||||||||||||||||||    
T  31640796 attctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||   |||||||| |||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| |||||||  || ||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| | |||||| || ||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 13664737 - 13664792
Alignment:
Q  76 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatc 131  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| | ||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 27481952 - 27482096
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaa-tctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||||||||||          || |||||||||||||| ||| | ||| ||||| |||||||||| ||  |||||||||||    
T  27481952 cggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattctt 27482051  T
Q  127 gaatctttctt-ataaaatcatt-tttgatatctagcattttcca 169  Q
    |||||||| || ||||||||||| ||| |||||||  ||||||||    
T  27482052 gaatcttttttgataaaatcattctttaatatctaatattttcca 27482096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| || ||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| | |||||| || ||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| |||||||||||||||| |  |||||| |||||||| || ||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 36880213 - 36880148
Alignment:
Q  68 atgaaaggttaataaatgagactg-aaatctaagggtgat----tattgtgccatgtcattcttga 128  Q
    |||||||||||||| ||||||||| |||||||||||||||    ||||||| ||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattcttga 36880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 12850878 - 12850805
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| |||||||||||| ||| |  |||||| |||||||| || ||||||| |||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 14138745 - 14138680
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    |||| |||||||||||||| |||||||| |||||||||  |||||| |||||||| || |||||||    
T  14138745 aaatttaagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatat 14138680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33584317 - 33584390
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 10458465 - 10458429
Alignment:
Q  101 ggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttctt 10458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 9293532 - 9293369
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||||||    
T  9293532 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtga 9293433  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9293432 ttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcca 9293369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 33380316 - 33380478
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         | |||||| |||||||||||||||||||||||| ||||||    
T  33380316 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgat 33380415  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33380416 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 33380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 35160866 - 35161032
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||            ||||||| |||||||||||||||||||||||| ||||    
T  35160866 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtg 35160965  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35160966 attattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccaat 35161032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 23268018 - 23267857
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  23268018 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 23267919  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  23267918 tattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 31174790 - 31174633
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||| |||||||||| || | ||    
T  31174790 ccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagttt 31174691  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattt 165  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31174690 attgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 10661996 - 10662159
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||||           ||||||| |||||||||||||||||||||||| |||||    
T  10661996 ccaataaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtga 10662095  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10662096 ttattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 10662159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 7475464 - 7475302
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  7475464 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 7475365  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||| || ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7475364 tattatgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 7475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 3989185 - 3989342
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||| ||    
T  3989185 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttat 3989284  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatt 164  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  3989285 tattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 13354955 - 13355118
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| |||||||| |||||| ||||||||||||| |||||||||||||||||           ||||||| ||||||||||||||||||||||||  |||    
T  13354955 ccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtg 13355054  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  13355055 attattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 22592880 - 22592983
Alignment:
Q  68 atgaaaggttaataaatgagactgaaa--tctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  165 ttcc 168  Q
    ||||    
T  22592980 ttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 9723519 - 9723678
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattatt 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||           |||||| || ||||||| |||||||||||||| ||||||||||    
T  9723519 aaaatctcagcctcaccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattatt 9723618  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
     || |||||||||||| ||| |||||| || |||||||| |||||||||| |||||||||    
T  9723619 ctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcca 9723678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 21936190 - 21936321
Alignment:
Q  8 ccaagaaaatctc-agcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||| |||||||||||| |||||    
T  21936190 ccaataaaatctctagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtga 21936289  T
Q  106 ttattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||||||||||||| ||| |||||    
T  21936290 ttattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||   |||||||| |||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 40262692 - 40262531
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||||||||          |||||| ||||| |||| | ||||||||||||| || ||    
T  40262692 ccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgtatttattttttatgaaacgttaacaaataaaactgaaatctaagagttat 40262593  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||| | ||||||||||||||||||  || |  |||  |||| |||||||||||||||||||    
T  40262592 tattctaccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcattttcc 40262531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 14941317 - 14941199
Alignment:
Q  14 aaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaaggttaataaatgagactgaaatctaagggtgattat 109  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||             ||||||||||||||||| ||| |||||||||||| |||||||    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattat 14941218  T
Q  110 tgtgccatgtcattcttga 128  Q
    |||| ||||||||||||||    
T  14941217 tgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcat 147  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27847746 - 27847791
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  27847746 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| |||||||| || ||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| || | |||||| || ||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 16767428 - 16767378
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||| |||||||||||||||||||    
T  16767428 ccaataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 27847709 - 27847663
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttctta 27847663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 39819272 - 39819318
Alignment:
Q  123 tcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcca 39819318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| || |||||||||||| |||||||||| |||||||| || || |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  93 aatctaagggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 3989153 - 3989119
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||| |||||||||||||||    
T  3989153 aaatctaagggtgattattctgccatgtcattctt 3989119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 21393624 - 21393594
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  21393624 ccggaaatcatggggtggtgggtgttatgta 21393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 43331041 - 43331071
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  43331041 ccggaaatcatggggtggtgggtgttatgta 43331071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |  |||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    |||||||||||| |||||| |||||| |||||||||||  |||||| |||||||| || |||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 21393676 - 21393721
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| | ||||||||||||| ||| ||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttctt 21393721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33380284 - 33380211
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||||||||||||  |||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 22591591 - 22591639
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatg 56  Q
    |||| |||||||||||||  | ||||||||||||||||||||| |||||    
T  22591591 ccaataaaatctcagcctagcaggaaatcatggggtggtgggtattatg 22591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 41120 - 41287
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  41120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgatt 41219  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaataaaa 175  Q
    ||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  41220 attgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttccaaaaaaa 41287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttg-aatctttcttataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||| | |||||||| || ||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 51737614 - 51737775
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  51737614 ccaataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 51737713  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  51737714 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 40215097 - 40215257
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||  |||||||||||||||||||||||| ||||||    
T  40215097 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgat 40215196  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40215197 tattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 19015513 - 19015674
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  19015513 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgat 19015612  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  19015613 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 25463785 - 25463946
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| ||||||||||||||| |||||||| ||||||    
T  25463785 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgat 25463884  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  25463885 tattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 44094807 - 44094967
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||    
T  44094807 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgatt 44094906  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  44094907 attgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcc 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 6883596 - 6883757
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||     
T  6883596 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaa 6883695  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  6883696 tattatgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 36966664 - 36966503
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  36966664 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 36966565  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  36966564 tattgtgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 41876398 - 41876237
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  41876398 ccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 41876299  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  41876298 tattgtgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 37821790 - 37821627
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| ||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  37821790 ccaataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37821691  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  37821690 tattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccaa 37821627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 20305087 - 20304925
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| ||||||||||| || ||| |||||||||| ||||||||||||||||           ||||||| || ||||||||||||||||||||| |||||    
T  20305087 ccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtga 20304988  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20304987 ttattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 3559726 - 3559887
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgtta-tgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||||         ||||||| |||||||||||||||||||| ||| ||||||    
T  3559726 ccaataaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgat 3559825  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  3559826 tattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 25973542 - 25973678
Alignment:
Q  32 aaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatc 131  Q
    |||||||||||||||||||||||||||         ||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||     
T  25973542 aaatcatggggtggtgggtgttatgtatttttttt-atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatt 25973640  T
Q  132 tttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25973641 tttcttataaaatcattcttgatatctagcattttcca 25973678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 18404618 - 18404718
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  168 c 168  Q
    |    
T  18404718 c 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 9910249 - 9910083
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| ||||||||||  || ||||||||||||||||||||||||||||| |            ||||||| ||||||||| || ||||||||||| ||||    
T  9910249 ccaataaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtg 9910150  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  9910149 attattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttccaat 9910083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 32000151 - 32000060
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcca 32000060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  71 aaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||| ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 19722970 - 19722892
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttccaa 19722892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 27523211 - 27523050
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||||||| |||| ||||||||||||||||| |||||||||||||         |||||| |||||||||| ||||| ||||| ||||||||||    
T  27523211 ccaataaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgatt 27523112  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    | | ||||||   ||||||||||||||||| ||||||||||| ||||||| || ||||||||    
T  27523111 aatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 33786623 - 33786706
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaataaaa 175  Q
    |||| |||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||| |||| ||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcatttcccaaaaaaa 33786706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  96 ctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttc 167  Q
    |||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 22157433 - 22157332
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||| |||||||||| ||| |||||| |||| ||||||||| | ||||||||||||| ||||  || ||  || ||||||||||||||||||||||||    
T  22157433 atgaaatgttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttc 22157334  T
Q  168 ca 169  Q
    ||    
T  22157333 ca 22157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 52329445 - 52329508
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatc 131  Q
    |||||| |||||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  52329445 atgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||| |||||| | |||||| || |||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||  || ||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 6883564 - 6883513
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaa 143  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||| ||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaa 6883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44690985 - 44690935
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  44690985 ccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 10167577 - 10167670
Alignment:
Q  76 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaat-ctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||| |||||||||||||| ||||||||||||  ||| | |||||| |||  ||| ||||||||||||| || |||| || ||||||||    
T  10167577 ttaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacattttcc 10167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| | |||||| || ||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||| ||||| || |||||||||||||||| |||||| | |||||| || ||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| | |||||| || ||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||| | |||||| || ||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 32000203 - 32000173
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  32000203 ccggaaatcatggggtggtgggtgttatgta 32000173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 40273831 - 40273861
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||||||||    
T  40273831 ccggaaatcatggggtggtgggtgttatgta 40273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3559694 - 3559621
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt-gaatctttcttataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| |||||||||||||||  ||| ||| | |||||||| || ||||||| |||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||| |||||||||| | ||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44691017 - 44691082
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatc-tttcttataaaatcatttttgatat 156  Q
    ||||||||| || |||||| |||||||| ||||||||||| ||| |||||||||| || |||||||    
T  44691017 aaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 19650850 - 19650694
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgt 112  Q
    ||||||||||| || |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  19650850 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 19650751  T
Q  113 gccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  19650750 gtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcca 19650694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 22426300 - 22426140
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||  ||||||    
T  22426300 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgatt 22426201  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22426200 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 30385525 - 30385671
Alignment:
Q  23 cctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcat 122  Q
    |||| |||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  30385525 cctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 30385624  T
Q  123 tcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  30385625 tcttgaatctttcttataaaatcattcttgatatttagcattttcca 30385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 3137370 - 3137209
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  3137370 ccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgat 3137271  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  3137270 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 33145821 - 33145980
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||| ||||||          ||||||||||||||||| |||||||||||||||||||||    
T  33145821 ccaataaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgat 33145920  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33145921 tattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 6041993 - 6042147
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| |          ||||||  |||||||||||||||||||||||| |||||||    
T  6041993 ccaataaaatctcagcctgaccggaaatcatggggtggtggttgttattt------ttttatgaaaaattaataaatgagactgaaatctaaaggtgatt 6042086  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  6042087 attgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 33113902 - 33114064
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||||           ||||||| ||||||||||||| |||||||||| |||||    
T  33113902 ccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtga 33114001  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33114002 ttattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 2754826 - 2754990
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||            ||||||| |||||||||||||||||||| ||| ||||    
T  2754826 ccaataaaatctcagcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtg 2754925  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  2754926 attattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttcca 2754990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 3089526 - 3089693
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||| ||||||            ||||||| |||||||||||||||||||||||| ||||    
T  3089526 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtg 3089625  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaata 172  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  3089626 attattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttccaata 3089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 3456173 - 3456334
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| | ||||    
T  3456173 ccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgat 3456272  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3456273 tagtgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 3574482 - 3574321
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||  ||||||    
T  3574482 ccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgat 3574383  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  3574382 tattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 8320540 - 8320378
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatgggg-tggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| |||||||||||||| || |||||||||||| | ||||||||||||||           ||||||| |||||||||||||||||||||||| ||||    
T  8320540 ccaataaaatctcagcctggccagaaatcatgggggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtg 8320441  T
Q  105 attattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8320440 attattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 37522162 - 37522325
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| ||||||||| |||| |||||||| ||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  37522162 ccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37522261  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaa 170  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  37522262 tattatgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttccaa 37522325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 47738214 - 47738383
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat-------gaaaggttaataaatgagactgaaatctaag 100  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||         ||       |||||||||||||||||||||||||||||||    
T  47738214 ccaataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgtatttttttttattttttatgaaaggttaataaatgagactgaaatctaag 47738313  T
Q  101 ggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  47738314 gatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcca 47738383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 37217009 - 37216848
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||  | | ||||||| |||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  37217009 ccaataaaatctcagccttgctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 37216910  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37216909 tattgtaccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 34482783 - 34482683
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttc 167  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  168 c 168  Q
    |    
T  34482683 c 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 26612916 - 26613018
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  167 cca 169  Q
    |||    
T  26613016 cca 26613018  T

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Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 36864967 - 36864827
Alignment:
Q  28 ccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttg 127  Q
    |||||||||||||| ||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36864967 ccggaaatcatgggatggtgggtgttatgtattttttat-atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttg 36864869  T
Q  128 aatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    ||||||| || ||||||||||| |||||||||||||||||||    
T  36864868 aatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 48161014 - 48161176
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtga 105  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||||||||           ||||||  |||||||||||||||||||||||| |||||    
T  48161014 ccaataaaatctcagcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtga 48161113  T
Q  106 ttattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||| |||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  48161114 ttattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttcc 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 40328004 - 40328102
Alignment:
Q  71 aaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 168  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  40328004 aaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

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Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 9796914 - 9796817
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaataaaa 175  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||   |||||||| ||||||||||||||||||| ||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcccataaaa 9796817  T

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Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

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Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  68 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||| || ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

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Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||   |||||||| |||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 24343656 - 24343821
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnat---gaaaggttaataaatgagactgaaatctaagggtg 104  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||||||||          |   ||||||||||||||| |||||||||||||||||||    
T  24343656 ccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgttatgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtg 24343755  T
Q  105 attattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcca 169  Q
    |||||  |  |||||||||||||||||||| || ||||||||||| |||||||||| |||||||||    
T  24343756 attatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttcca 24343821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  78 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 42297973 - 42298092
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatctaagggtgatt 107  Q
    |||| |||||||||| ||| ||||||||||||||||||| | |||||||||         ||||||||||||||||||||||||||||||||||||| ||    
T  42297973 ccaataaaatctcagtctggccggaaatcatggggtggtagatgttatgtatttttttt-atgaaaggttaataaatgagactgaaatctaagggtggtt 42298071  T
Q  108 attgtgccatgtcattcttga 128  Q
    |||||| ||||||||||||||    
T  42298072 attgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 41883174 - 41883031
Alignment:
Q  13 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaaggttaataaatgagactgaaatctaagggtgattatt 110  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||           || ||||||| |||||| ||||||||||| || | ||||||||    
T  41883174 aaaatctcagactggctagaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattatt 41883075  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcatttttga 153  Q
     | |||||||||||||||||||||||| ||||||||||||||||    
T  41883074 ttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 46919072 - 46919164
Alignment:
Q  76 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcattttc 167  Q
    ||||||||| |||| ||||||||  |||||||||| |||||||||||| |||||||||| || ||||||||||| |||||||||| |||||||    
T  46919072 ttaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 42297463 - 42297549
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaaggttaataaatgagactgaaatc 96  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||| |||||    
T  42297463 ccaataaaatctcagcctgaccggaaatcatggggtggtggatgttatgta--tttttttatgaaaggttaataaatgagactaaaatc 42297549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30385120 - 30385170
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  30385120 ccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33113870 - 33113797
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||||| |||||||||  |||||| |||||||| || ||||||| |||||||    
T  33113870 aaatctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcatt 33113797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||| | |||||||| || ||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 34482866 - 34482824
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggt 50  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  34482866 ccaataaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 40327934 - 40327984
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 58  Q
    |||| ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  40327934 ccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3456141 - 3456068
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9797017 - 9797062
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 9797062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||||| |||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| ||||||||||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 48160982 - 48160909
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| |||||| |||||||| ||  |||||| |||||||| || ||||||| |||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 3089494 - 3089460
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||| |||||||||||||||    
T  3089494 aaatctaagggtgattattctgccatgtcattctt 3089460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 30385088 - 30385015
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||| |||||||||||||| |||||||||||| |||||  |||||| |||||||| || ||||||  |||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| | |||| |||||||||||  |||||| | |||||| || ||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 41224363 - 41224392
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgta 41224392  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    |||||||| ||| |||||| |||||| |||||||||||| |||||| |||||||| || |||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

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Target: scaffold0228 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 26045 - 26206
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  26045 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 26144  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  26145 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 26206  T

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Target: scaffold0228; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 16093 - 16254
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| |||||||||||||||||||||||| | ||||    
T  16093 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgat 16192  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16193 tattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 16254  T

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Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

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Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 8511 - 8603
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaaggttaataaatgagactgaaatctaa 99  Q
    |||| |||||||||| ||| |||||||||||||| ||||||||||||||||          ||||||| ||||||||||||||||||||||||    
T  8511 ccaataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa 8603  T

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Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

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Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

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Target: scaffold0204 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 4505 - 4667
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  4505 ccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgat 4604  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttcca 169  Q
    ||||||||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  4605 tattgtgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcca 4667  T

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Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| | |||||| || ||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

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Target: scaffold0178 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 11730 - 11895
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||||||          ||||||| |||||||||||||||||||||||| ||||||    
T  11730 ccaataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgat 11829  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaata 172  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||    
T  11830 tattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttccaata 11895  T

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Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

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Target: scaffold0471 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 12951 - 13110
Alignment:
Q  8 ccaagaaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaaggttaataaatgagactgaaatctaagggtgat 106  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||          ||||||| |||||||||||||||||||||||| ||| ||    
T  12951 ccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaat 13050  T
Q  107 tattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcatttt 166  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  13051 tattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

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Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    |||||||||| |||||||| ||||||||||||||||||  |||||| | |||||| || ||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

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Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 85577 - 85645
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcatttttgatatctagcattttccaat 171  Q
    |||||||||||||||||| ||| || ||||||||  || |||||||| ||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttccaat 85645  T

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Target: scaffold0665 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  92 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatttttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||| || |||||||| || ||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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