View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18562_high_4 (Length: 429)

Name: NF18562_high_4
Description: NF18562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18562_high_4
NF18562_high_4
[»] chr1 (25 HSPs)
chr1 (3-413)||(9488244-9488654)
chr1 (3-282)||(9435720-9435985)
chr1 (194-413)||(9463841-9464059)
chr1 (3-198)||(9459081-9459276)
chr1 (3-198)||(9462908-9463103)
chr1 (91-185)||(9454061-9454155)
chr1 (94-185)||(9318524-9318615)
chr1 (91-170)||(9486441-9486520)
chr1 (95-185)||(9399415-9399505)
chr1 (91-171)||(9433088-9433168)
chr1 (94-185)||(9319687-9319778)
chr1 (94-185)||(9350004-9350095)
chr1 (89-189)||(9143101-9143201)
chr1 (89-183)||(8964292-8964386)
chr1 (91-185)||(9255262-9255356)
chr1 (315-413)||(9318296-9318394)
chr1 (95-168)||(9234313-9234386)
chr1 (95-168)||(9384008-9384081)
chr1 (113-185)||(9348783-9348855)
chr1 (311-363)||(10974248-10974300)
chr1 (297-363)||(10903417-10903483)
chr1 (320-413)||(8964523-8964616)
chr1 (320-413)||(8999674-8999767)
chr1 (323-411)||(8942031-8942119)
chr1 (91-159)||(9082799-9082867)
[»] chr3 (2 HSPs)
chr3 (113-185)||(9159396-9159468)
chr3 (315-408)||(9159598-9159691)
[»] chr6 (2 HSPs)
chr6 (91-166)||(15927449-15927524)
chr6 (315-413)||(15927202-15927300)


Alignment Details
Target: chr1 (Bit Score: 379; Significance: 0; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 3 - 413
Target Start/End: Original strand, 9488244 - 9488654
Alignment:
Q  3 aaggtagatttctgagttgtccaattccttgtacaggcattccttttggagtttgaaatggcttaggaggcatttccaaggactcgacatctccttcaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9488244 aaggtagatttctgagttgtccaattccttgtacaggcattccttttggagtttgaaatggcttaggaggcatttccaaggactcgacatctccttcaag 9488343  T
Q  103 taactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagtatcttctcctcctct 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9488344 taactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagtatcttctcctcctct 9488443  T
Q  203 tctgtaccattccccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagggaaataaacttgactcttatgatcttcaccctcattca 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9488444 tctgtaccattccccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagggaaataaacttgactcttatgatcttcactctcattca 9488543  T
Q  303 tgttccttcttctactcgccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctgg 402  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||||||||| |||||    
T  9488544 tgttccttctcctactcgccatttccattaacaacattccaaagctataaacatctgctttgtacgatactcctccaatattcttatagaacaattctgg 9488643  T
Q  403 cgccatgtatc 413  Q
     ||||||||||    
T  9488644 tgccatgtatc 9488654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 3 - 282
Target Start/End: Original strand, 9435720 - 9435985
Alignment:
Q  3 aaggtagatttctgagttgtccaattccttgtacaggcattccttttggagtttgaaatggcttaggaggcatttccaaggactcgacatctccttcaag 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||     
T  9435720 aaggtagatttctgagttgtccaattccttgtacaggcattcctttaggagtttgaaatggctttggaggcatttccaaggactcaacatctccttcaa- 9435818  T
Q  103 taactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagtatcttctcctcctct 202  Q
                 |||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||    
T  9435819 -------------ttgttcattgacggacgatcaattggtttcatctgtatataccacaatgcaactattatcatcttcttcaatatcttttcctcctct 9435905  T
Q  203 tctgtaccattccccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagggaaataaacttgactctt 282  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9435906 tctgtaccatttcccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagggaaataaacttgactctt 9435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 194 - 413
Target Start/End: Original strand, 9463841 - 9464059
Alignment:
Q  194 tcctcctcttctgtaccattccccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagggaaataaacttgactcttatgatcttcac 293  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9463841 tcctcctcctccgtaccattccccatttctatttccttcccttcgctaaattggtcgtaaacccaagaagtgaaataaacttgactcttatgatcttcac 9463940  T
Q  294 cctcattcatgttccttcttctactcgccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaa 393  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  9463941 tctcattcatgttccttctcctactcgccatttccattaacaacattcc-aagctataaacatctgctttgtacgatactcctccaatgttcttatagaa 9464039  T
Q  394 caactctggcgccatgtatc 413  Q
    ||||||||| ||||||||||    
T  9464040 caactctggtgccatgtatc 9464059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 9459081 - 9459276
Alignment:
Q  3 aaggtagatttctgagttgtccaattccttgtacaggcattccttttggagtttgaaatggcttaggaggcatttccaaggactcgacatctccttcaag 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9459081 aaggtagatttctgagttgtccaatgccttgtacaggcattccttttgcagtttgaaatggcttaggaggcatttccaaggactcaacatctcctacaag 9459180  T
Q  103 taactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagtatcttctcctc 198  Q
     ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  9459181 caactcaaccactttgttcatcgaaggacggtcaattggtttcatctatatacaccacaacgcaactattatcatcttcttcaatatcttctcctc 9459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 9462908 - 9463103
Alignment:
Q  3 aaggtagatttctgagttgtccaattccttgtacaggcattccttttggagtttgaaatggcttaggaggcatttccaaggactcgacatctccttcaag 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9462908 aaggtagatttctgagttgtccaatgccttgtacaggcattccttttgcagtttgaaatggcttaggaggcatttccaaggactcaacatctcctacaag 9463007  T
Q  103 taactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagtatcttctcctc 198  Q
     ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  9463008 caactcaaccactttgttcatcgaaggacggtcaattggtttcatctatatacaccacaacgcaactattatcatcttcttcaatatcttctcctc 9463103  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 9454155 - 9454061
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    |||||||||||| | ||| || ||||| ||||| |||||||||||||| ||||||| |||||||||||||||| ||||||| | ||| |||||||    
T  9454155 atctccttcaagcatctctactacttttttcattgaaggacgatcaatgggtttcaactgtatacaccataatccaactatgaacattttcttca 9454061  T

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Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 9318615 - 9318524
Alignment:
Q  94 tccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    ||||||||| | ||| | |||||||||||| ||||||||||||  ||||||||  ||||||||||||||||||| ||| | |||||||||||    
T  9318615 tccttcaagcatctctatcactttgttcattgaaggacgatcacatggtttcaattgtatacaccataatgcaattatgaacatcttcttca 9318524  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 9486520 - 9486441
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaacta 170  Q
    |||||||||||| | ||| || ||||||||||| |||||||||||||| ||||||| |||||||||||| | ||||||||    
T  9486520 atctccttcaagcatctctactactttgttcattgaaggacgatcaatgggtttcaactgtatacaccaaagtgcaacta 9486441  T

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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 9399415 - 9399505
Alignment:
Q  95 ccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    |||||||| | ||| || ||||||||||| |||||||||||||| ||||||| |||||||||||| | ||||||||| | ||| |||||||    
T  9399415 ccttcaagcatctctactactttgttcattgaaggacgatcaatgggtttcaactgtatacaccaaagtgcaactatgaacattttcttca 9399505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 9433168 - 9433088
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactat 171  Q
    |||||||||||| | ||| || ||||||||||| |||||||||||||  ||||||| |||||||||||| | |||||||||    
T  9433168 atctccttcaagcatctctactactttgttcattgaaggacgatcaacgggtttcaactgtatacaccaaagtgcaactat 9433088  T

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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 9319687 - 9319778
Alignment:
Q  94 tccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    ||||||||| | ||| | |||||||||||| ||||||||||||  ||||||||  ||||||||||||||||| | ||| | |||||||||||    
T  9319687 tccttcaagcatctctatcactttgttcattgaaggacgatcacatggtttcaattgtatacaccataatgctattatgaacatcttcttca 9319778  T

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Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 9350004 - 9350095
Alignment:
Q  94 tccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    ||||||||| | ||| | |||||||||||| ||||||||||||  ||||||||  ||||||||||||||||| | ||| | |||||||||||    
T  9350004 tccttcaagcatctctatcactttgttcattgaaggacgatcacatggtttcaattgtatacaccataatgctattatgaacatcttcttca 9350095  T

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Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 9143201 - 9143101
Alignment:
Q  89 acatctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttcagta 188  Q
    ||||||||||| || | ||| || ||||||||||| || || ||||||  ||||||||  ||||||||||| | ||||||||| ||||||||||| ||||    
T  9143201 acatctccttcgagcatctccactactttgttcattgaggggcgatcagctggtttcaattgtatacaccaaagtgcaactatgatcatcttctttagta 9143102  T
Q  189 t 189  Q
    |    
T  9143101 t 9143101  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 8964292 - 8964386
Alignment:
Q  89 acatctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttctt 183  Q
    ||||||||||| || | ||| || || |||||||| || || ||||||| |||||||| |||||||||||| | ||| ||||| |||||||||||    
T  8964292 acatctccttcgagcatctccactaccttgttcattgaggggcgatcaactggtttcaactgtatacaccaaagtgcgactatgatcatcttctt 8964386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 9255356 - 9255262
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    |||||||||||| | ||| | |||||| ||||| || |||||||||  ||||||||  ||||||||||||||||| | ||| | |||||||||||    
T  9255356 atctccttcaagcatctctatcactttattcattgagggacgatcacatggtttcaattgtatacaccataatgctattatgaacatcttcttca 9255262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 9318394 - 9318296
Alignment:
Q  315 tactcgccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccatgtatc 413  Q
    |||| ||||||||||| || | |||||||||||| || ||||| || || || |||||||||||||| || || |||||||| || || ||||||||||    
T  9318394 tacttgccatttccatcaaaagcattccaaagctatatacatcggccttgtaggatactcctccaatatttttgtagaacaattcaggagccatgtatc 9318296  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 9234386 - 9234313
Alignment:
Q  95 ccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaac 168  Q
    |||||||| | |||||| ||||||||||| |||||||||||| | ||||||| ||| |||||||| | ||||||    
T  9234386 ccttcaagcatctcaactactttgttcattgaaggacgatcactcggtttcaactgaatacaccaaagtgcaac 9234313  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 9384008 - 9384081
Alignment:
Q  95 ccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaac 168  Q
    |||||||| | |||||| ||||||||||| | |||||||||| | ||||||| ||| |||||||| ||||||||    
T  9384008 ccttcaagcatctcaactactttgttcattgtaggacgatcactcggtttcaactgaatacaccaaaatgcaac 9384081  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 9348855 - 9348783
Alignment:
Q  113 actttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    ||||| ||||| | |||||||||| ||||||| | |||||||||||||||||||| ||| | ||| |||||||    
T  9348855 actttattcattgcaggacgatcacttggttttaactgtatacaccataatgcaattatgaacattttcttca 9348783  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 10974248 - 10974300
Alignment:
Q  311 cttctactcgccatttccattaacaacattccaaagctgtaaacatctgcttt 363  Q
    |||||||||||||| |||||||||||||| |||||||| || ||||| |||||    
T  10974248 cttctactcgccatctccattaacaacatcccaaagctatagacatcagcttt 10974300  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 10903417 - 10903483
Alignment:
Q  297 cattcatgttccttcttctactcgccatttccattaacaacattccaaagctgtaaacatctgcttt 363  Q
    |||||| |||| | |||||||| ||||| |||||||||||||| |||||||| || ||||| |||||    
T  10903417 cattcaagttcttccttctacttgccatctccattaacaacatcccaaagctatagacatcagcttt 10903483  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 413
Target Start/End: Original strand, 8964523 - 8964616
Alignment:
Q  320 gccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccatgtatc 413  Q
    ||||| ||||| || | ||| |||||||| |||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| ||||| ||||    
T  8964523 gccatctccatcaaaagcatcccaaagctataaacatcagccttataggacactcccccaatatttttatagaacaattctggagccatatatc 8964616  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 413
Target Start/End: Original strand, 8999674 - 8999767
Alignment:
Q  320 gccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccatgtatc 413  Q
    ||||| ||||| || | ||| |||||||| |||||||| || ||||| || ||||| ||||| || ||||||||||| ||||| ||||| ||||    
T  8999674 gccatctccatcaaaagcatcccaaagctataaacatcagccttataagacactcccccaatatttttatagaacaattctggagccatatatc 8999767  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 8942031 - 8942119
Alignment:
Q  323 atttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccatgta 411  Q
    ||||||||||| | |||||||||||| || ||||| |||||||| || |||   ||||| || || |||||||| ||||| ||||||||    
T  8942031 atttccattaagagcattccaaagctatacacatcggctttataggaaactttaccaatatttttgtagaacaattctggtgccatgta 8942119  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 9082867 - 9082799
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacacca 159  Q
    |||||||||||| | ||| || ||| |  ||||||||||||||||| |||||||||  |||||||||||    
T  9082867 atctccttcaagcatctccactactctactcatcgaaggacgatcatttggtttcaattgtatacacca 9082799  T

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Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 9159396 - 9159468
Alignment:
Q  113 actttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgcaactattatcatcttcttca 185  Q
    ||||||||||| | |||||||||| ||||||| | |||||||||||||||||||| ||| | ||| |||||||    
T  9159396 actttgttcattgcaggacgatcacttggttttaactgtatacaccataatgcaattatgaacattttcttca 9159468  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 408
Target Start/End: Original strand, 9159598 - 9159691
Alignment:
Q  315 tactcgccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccat 408  Q
    |||| ||||||||||| || | ||||||||| || |||||||| || || ||||||||||| ||||| || || ||||||||||| || |||||    
T  9159598 tacttgccatttccatcaaaagcattccaaaactataaacatcagccttgtatgatactccaccaatatttttgtagaacaactcgggagccat 9159691  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 15927524 - 15927449
Alignment:
Q  91 atctccttcaagtaactcaaccactttgttcatcgaaggacgatcaattggtttcatctgtatacaccataatgca 166  Q
    |||||||||||| | ||| | |||| ||||||| |||||||||||| ||||||| |  || |||||||||||||||    
T  15927524 atctccttcaagcatctctatcactctgttcattgaaggacgatcacttggttttaattgaatacaccataatgca 15927449  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 413
Target Start/End: Complemental strand, 15927300 - 15927202
Alignment:
Q  315 tactcgccatttccattaacaacattccaaagctgtaaacatctgctttatatgatactcctccaatgttcttatagaacaactctggcgccatgtatc 413  Q
    |||| ||||||||||| || | |||||||||||| || ||||| || ||||| || ||||||||||| || || ||||| || || || ||||||||||    
T  15927300 tacttgccatttccatcaaaagcattccaaagctatatacatcggccttatacgaaactcctccaatatttttgtagaataattcaggagccatgtatc 15927202  T

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