View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18563_high_22 (Length: 271)
Name: NF18563_high_22
Description: NF18563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18563_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 54 - 253
Target Start/End: Complemental strand, 29593018 - 29592819
Alignment:
| Q |
54 |
aagtcatgcatgttttgagacttcaaggaccaataccggaaaacgatcaatcttaaatgactgctggtaaaattttggcctatcaaaggaaaaggtgact |
153 |
Q |
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| T |
29593018 |
aagtcatgcatgttttgagacttcaaggaccaataccggaaaacgatcaatcttaaatgactgctggtaaaattttggcctatcaaaggaaaaggtgact |
29592919 |
T |
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| Q |
154 |
tacttggatctgaagtagagatagtagccatgtcattgaagttacatgattcagtagactttctcatcttatgataataagcatcaaaagcataattagc |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
29592918 |
tacttggatctgaagtagagatagtagccatgtcattgaagttacatgattcagtagactttcccatcttatgataataagcatcaaaagcataattagc |
29592819 |
T |
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