View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18563_low_19 (Length: 299)
Name: NF18563_low_19
Description: NF18563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18563_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 7934657 - 7934946
Alignment:
| Q |
1 |
ccatagacgagttctttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctatgatgattat |
100 |
Q |
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| T |
7934657 |
ccatagacgagttctttgtttctcgataagattcagattttagattaaaaaataataattggtcataagataccatttagtgactacctaggatgattat |
7934756 |
T |
|
| Q |
101 |
atgaattaatatttaaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttatctccattacaaacaaatgtttcatcatta |
200 |
Q |
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| T |
7934757 |
atgaattaatatttaaccaaaagttaaggccaatgttttgcatagtttgctttgttgggaacaatgtttgtctccattacaaacaaatgtttcatcatta |
7934856 |
T |
|
| Q |
201 |
tcttatttttcattgttgtgtcttatgtacatccattatataaatgcaatggcctt-gcataattgtccacactgataccctcccctttg |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
7934857 |
tcttatttttcattgttgtgtcttatgtacatccattatataaatgcaatggccttcacataattgtccacactgataccctcccctttg |
7934946 |
T |
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