View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18563_low_22 (Length: 287)
Name: NF18563_low_22
Description: NF18563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18563_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 7 - 272
Target Start/End: Original strand, 26694714 - 26694979
Alignment:
| Q |
7 |
taataatgcgacaaaaattacaaattaattagcttaattctatgctaattgcattggtgctaaacaattcaacaaatttctgagctaactctgagtaaac |
106 |
Q |
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| T |
26694714 |
taataatgcgataaaaattacaaattaattagcttaattctatgctaattgcattggtgctaaacaattcaacaaatttctgagctaactctgagtaaac |
26694813 |
T |
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| Q |
107 |
aatgattattgttttgattactaacctgagacgcgtggatgaagaaaacggattcatggttagaagtagaaattggatccaattgaattggtgagatccg |
206 |
Q |
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| T |
26694814 |
aatgattcttgttttgattactaacctgagacgcgtggatgaagaaaacggattcatggttagaagtagaaattggatccaattgaattggtgagatccg |
26694913 |
T |
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| Q |
207 |
aatcgcttacgacgaaggagatttggatctgagagtgggactttgaattattatttcctcgttatt |
272 |
Q |
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| T |
26694914 |
aatcgcttacgacgaaggagatttggatctgagagtggaactttgaattattatttcctcgttatt |
26694979 |
T |
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