View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18564_high_10 (Length: 229)

Name: NF18564_high_10
Description: NF18564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18564_high_10
NF18564_high_10
[»] chr7 (34 HSPs)
chr7 (130-169)||(44958470-44958509)
chr7 (129-169)||(5234168-5234208)
chr7 (123-169)||(25092150-25092196)
chr7 (129-167)||(36687229-36687267)
chr7 (129-169)||(35104074-35104114)
chr7 (133-169)||(46759906-46759942)
chr7 (130-165)||(2945813-2945848)
chr7 (130-169)||(6911079-6911118)
chr7 (130-169)||(8144292-8144331)
chr7 (130-169)||(14543707-14543746)
chr7 (130-169)||(23399940-23399979)
chr7 (130-169)||(27458396-27458435)
chr7 (119-165)||(6509438-6509484)
chr7 (131-169)||(35837922-35837960)
chr7 (127-169)||(39438993-39439035)
chr7 (132-169)||(1614558-1614595)
chr7 (132-169)||(25988384-25988421)
chr7 (132-169)||(30709608-30709645)
chr7 (132-169)||(35838301-35838338)
chr7 (132-169)||(38486477-38486514)
chr7 (132-169)||(46759657-46759694)
chr7 (131-168)||(46828942-46828979)
chr7 (129-165)||(1614872-1614908)
chr7 (129-165)||(3975545-3975581)
chr7 (129-165)||(5233804-5233840)
chr7 (132-164)||(5611535-5611567)
chr7 (129-165)||(9659657-9659693)
chr7 (133-169)||(24717496-24717532)
chr7 (129-165)||(25988717-25988753)
chr7 (129-169)||(30223457-30223497)
chr7 (129-169)||(34878089-34878129)
chr7 (129-169)||(39520394-39520434)
chr7 (129-169)||(44568654-44568694)
chr7 (130-166)||(48854037-48854073)
[»] chr8 (39 HSPs)
chr8 (129-169)||(20984474-20984514)
chr8 (130-169)||(2728229-2728268)
chr8 (131-168)||(28324146-28324183)
chr8 (129-169)||(8298939-8298979)
chr8 (129-169)||(9175008-9175048)
chr8 (133-169)||(32195280-32195316)
chr8 (129-169)||(32725903-32725943)
chr8 (129-165)||(44997927-44997963)
chr8 (130-169)||(7420227-7420266)
chr8 (134-169)||(15930933-15930968)
chr8 (130-169)||(24187861-24187900)
chr8 (130-165)||(28497252-28497287)
chr8 (131-169)||(11019518-11019556)
chr8 (131-165)||(39439922-39439956)
chr8 (131-165)||(42429756-42429790)
chr8 (132-169)||(3512230-3512267)
chr8 (132-165)||(5357422-5357455)
chr8 (132-169)||(9496340-9496377)
chr8 (131-164)||(10292814-10292847)
chr8 (132-169)||(10337118-10337155)
chr8 (132-169)||(17073806-17073843)
chr8 (132-169)||(17574427-17574464)
chr8 (132-169)||(25600229-25600266)
chr8 (132-169)||(25702773-25702810)
chr8 (132-169)||(35097327-35097364)
chr8 (132-169)||(35346962-35346999)
chr8 (133-169)||(1778564-1778600)
chr8 (133-169)||(7185968-7186004)
chr8 (133-169)||(8298587-8298623)
chr8 (129-165)||(11976369-11976405)
chr8 (133-169)||(14489037-14489073)
chr8 (129-165)||(20984142-20984178)
chr8 (129-169)||(22650460-22650500)
chr8 (129-165)||(27117944-27117980)
chr8 (133-169)||(34963628-34963664)
chr8 (133-169)||(35346629-35346665)
chr8 (133-169)||(42132864-42132900)
chr8 (133-169)||(42133118-42133154)
chr8 (133-169)||(42430084-42430120)
[»] chr6 (20 HSPs)
chr6 (129-169)||(17765339-17765379)
chr6 (132-165)||(24901522-24901555)
chr6 (130-169)||(17765006-17765045)
chr6 (132-167)||(19129486-19129521)
chr6 (130-169)||(19690390-19690429)
chr6 (130-169)||(21385248-21385287)
chr6 (131-169)||(3276318-3276356)
chr6 (131-169)||(3968643-3968681)
chr6 (131-169)||(11448535-11448573)
chr6 (131-169)||(12757608-12757646)
chr6 (119-165)||(21385552-21385598)
chr6 (131-169)||(31398505-31398543)
chr6 (132-169)||(6412217-6412254)
chr6 (132-169)||(8170115-8170152)
chr6 (132-169)||(10910928-10910965)
chr6 (132-169)||(22543682-22543719)
chr6 (133-169)||(10910629-10910665)
chr6 (133-169)||(11925739-11925775)
chr6 (132-168)||(18024340-18024376)
chr6 (133-169)||(24901239-24901275)
[»] chr3 (34 HSPs)
chr3 (129-169)||(47114483-47114523)
chr3 (130-169)||(35177252-35177291)
chr3 (131-169)||(38232239-38232277)
chr3 (132-169)||(15979665-15979702)
chr3 (133-169)||(40370285-40370321)
chr3 (129-169)||(44802512-44802552)
chr3 (122-169)||(474372-474419)
chr3 (130-169)||(12741235-12741274)
chr3 (130-165)||(32119552-32119587)
chr3 (129-164)||(40477402-40477437)
chr3 (130-169)||(53113440-53113479)
chr3 (131-169)||(474042-474080)
chr3 (131-169)||(47005152-47005190)
chr3 (123-169)||(54608827-54608873)
chr3 (132-169)||(863280-863317)
chr3 (132-169)||(12740906-12740943)
chr3 (132-169)||(13514541-13514578)
chr3 (132-165)||(28452344-28452377)
chr3 (132-169)||(29490707-29490744)
chr3 (131-164)||(35936778-35936811)
chr3 (136-169)||(40545803-40545836)
chr3 (131-164)||(44507827-44507860)
chr3 (132-169)||(47336545-47336582)
chr3 (132-169)||(51550410-51550447)
chr3 (133-169)||(4034717-4034753)
chr3 (133-165)||(7957194-7957226)
chr3 (133-165)||(9261789-9261821)
chr3 (133-165)||(19844265-19844297)
chr3 (129-165)||(25615971-25616007)
chr3 (133-169)||(26090042-26090078)
chr3 (133-165)||(29678355-29678387)
chr3 (133-169)||(35533582-35533618)
chr3 (129-169)||(39436714-39436754)
chr3 (133-169)||(43441270-43441306)
[»] chr4 (29 HSPs)
chr4 (132-169)||(42823775-42823812)
chr4 (132-169)||(51738136-51738173)
chr4 (129-169)||(14791770-14791810)
chr4 (129-169)||(43231084-43231124)
chr4 (130-169)||(25424276-25424315)
chr4 (134-168)||(7639897-7639931)
chr4 (131-169)||(25423922-25423960)
chr4 (123-169)||(42848017-42848063)
chr4 (136-169)||(5797784-5797817)
chr4 (132-169)||(11693085-11693122)
chr4 (132-169)||(12152457-12152494)
chr4 (132-169)||(13631227-13631264)
chr4 (132-169)||(14488151-14488188)
chr4 (132-169)||(14594205-14594242)
chr4 (124-165)||(16573369-16573410)
chr4 (132-165)||(20291985-20292018)
chr4 (132-169)||(29420501-29420538)
chr4 (132-169)||(35464017-35464054)
chr4 (132-169)||(53916011-53916048)
chr4 (133-169)||(5827655-5827691)
chr4 (133-169)||(13073759-13073795)
chr4 (129-165)||(13530681-13530717)
chr4 (133-169)||(13764613-13764649)
chr4 (133-169)||(25358504-25358540)
chr4 (129-165)||(29499178-29499214)
chr4 (129-165)||(30046760-30046796)
chr4 (129-165)||(30061101-30061137)
chr4 (133-169)||(31560659-31560695)
chr4 (129-165)||(43231357-43231393)
[»] chr2 (21 HSPs)
chr2 (129-166)||(43672285-43672322)
chr2 (129-169)||(31644837-31644877)
chr2 (130-165)||(3172017-3172052)
chr2 (130-169)||(16673408-16673447)
chr2 (130-169)||(25705082-25705121)
chr2 (131-169)||(4424149-4424187)
chr2 (131-169)||(33576081-33576119)
chr2 (131-165)||(40125257-40125291)
chr2 (132-169)||(13215059-13215096)
chr2 (132-169)||(20131316-20131353)
chr2 (129-166)||(29182164-29182201)
chr2 (132-169)||(41451836-41451873)
chr2 (132-169)||(44559061-44559098)
chr2 (133-165)||(18113422-18113454)
chr2 (133-169)||(23732039-23732075)
chr2 (133-165)||(27109073-27109105)
chr2 (133-165)||(34317798-34317830)
chr2 (133-165)||(34318051-34318083)
chr2 (133-169)||(34964123-34964159)
chr2 (130-166)||(37228730-37228766)
chr2 (133-169)||(42695868-42695904)
[»] scaffold0005 (2 HSPs)
scaffold0005 (129-169)||(47921-47961)
scaffold0005 (132-169)||(223136-223173)
[»] chr5 (21 HSPs)
chr5 (129-169)||(37271670-37271710)
chr5 (133-169)||(42553642-42553678)
chr5 (130-169)||(1381244-1381283)
chr5 (130-169)||(17070532-17070571)
chr5 (130-169)||(18258491-18258530)
chr5 (131-169)||(19565465-19565503)
chr5 (130-164)||(27571157-27571191)
chr5 (130-164)||(34911856-34911890)
chr5 (132-169)||(5917125-5917162)
chr5 (132-165)||(15599764-15599797)
chr5 (132-169)||(17070827-17070864)
chr5 (132-169)||(19685016-19685053)
chr5 (132-169)||(20690732-20690769)
chr5 (132-169)||(35877016-35877053)
chr5 (133-169)||(45138-45174)
chr5 (133-165)||(21050575-21050607)
chr5 (129-169)||(26071580-26071620)
chr5 (129-169)||(26133377-26133417)
chr5 (133-169)||(30888160-30888196)
chr5 (133-169)||(35928422-35928458)
chr5 (133-165)||(40038826-40038858)
[»] chr1 (38 HSPs)
chr1 (133-169)||(20948755-20948791)
chr1 (129-169)||(33000633-33000673)
chr1 (130-169)||(3247195-3247234)
chr1 (130-169)||(19720709-19720748)
chr1 (130-169)||(24654131-24654170)
chr1 (130-169)||(30322926-30322965)
chr1 (130-169)||(34002632-34002671)
chr1 (131-169)||(12360932-12360970)
chr1 (131-169)||(15526326-15526364)
chr1 (123-165)||(33234880-33234922)
chr1 (131-168)||(7867322-7867359)
chr1 (132-169)||(8140433-8140470)
chr1 (132-169)||(10887562-10887599)
chr1 (132-165)||(26324584-26324617)
chr1 (132-165)||(30323261-30323294)
chr1 (136-169)||(31404429-31404462)
chr1 (132-169)||(31404686-31404723)
chr1 (132-165)||(35056862-35056895)
chr1 (132-169)||(36912852-36912889)
chr1 (132-169)||(39747799-39747836)
chr1 (132-169)||(42482978-42483015)
chr1 (132-169)||(45380271-45380308)
chr1 (132-169)||(45638858-45638895)
chr1 (133-169)||(10631164-10631200)
chr1 (133-169)||(12322934-12322970)
chr1 (129-169)||(17130047-17130087)
chr1 (133-169)||(24977778-24977814)
chr1 (132-164)||(27264244-27264276)
chr1 (132-168)||(32035753-32035789)
chr1 (133-169)||(35056530-35056566)
chr1 (133-165)||(38136949-38136981)
chr1 (133-169)||(40718110-40718146)
chr1 (129-169)||(45290453-45290493)
chr1 (133-165)||(45380604-45380636)
chr1 (129-165)||(47819564-47819600)
chr1 (132-164)||(48334160-48334192)
chr1 (129-169)||(49073687-49073727)
chr1 (123-167)||(51986540-51986584)
[»] scaffold0472 (1 HSPs)
scaffold0472 (131-168)||(7229-7266)
[»] scaffold0160 (1 HSPs)
scaffold0160 (132-169)||(27328-27365)
[»] scaffold0119 (1 HSPs)
scaffold0119 (133-169)||(16724-16760)
[»] scaffold0007 (1 HSPs)
scaffold0007 (133-169)||(2847-2883)
[»] scaffold0001 (1 HSPs)
scaffold0001 (133-169)||(148246-148282)


Alignment Details
Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 44958509 - 44958470
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44958509 aaaggctaaaatatgattttggtccctacaaatatgtctc 44958470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 5234208 - 5234168
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  5234208 taaaggctaaaatatggttttggtccctacaaatatgtctc 5234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 25092150 - 25092196
Alignment:
Q  123 attttgtaaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  25092150 attttttaaaggctaaaatatggttttggtccctgcaaatatgtctc 25092196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 36687267 - 36687229
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtc 167  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  36687267 taaaggctaaaatatgattttggtccctgcaaatatgtc 36687229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 35104074 - 35104114
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  35104074 taaaggctaaaatataattttggtccctgcaaatatgtctc 35104114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 46759942 - 46759906
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46759942 ggctaaaatatgattttggtccctgcaaatatgtctc 46759906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 2945848 - 2945813
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||| ||||||||||||||||||||    
T  2945848 aaaggctaaaatatgtttttggtccctacaaatatg 2945813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 6911079 - 6911118
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  6911079 aaaggctaaaatatgattttggtccttataaatatgtctc 6911118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 8144292 - 8144331
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  8144292 aaaggctaaaatatggttttggtccctgcaaatatgtctc 8144331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 14543707 - 14543746
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14543707 aaaggctaaaatatggttttggtccctgcaaatatgtctc 14543746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 23399979 - 23399940
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  23399979 aaaggctaaaatatggttttggtccctgcaaatatgtctc 23399940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 27458396 - 27458435
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  27458396 aaaggctaaaatatggttttggtccctgcaaatatgtctc 27458435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 6509484 - 6509438
Alignment:
Q  119 tattattttgtaaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||| | |||||||||||||| |||| |||||||||||||||    
T  6509484 tattattttttcaaggctaaaatatggttttagtccctacaaatatg 6509438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 35837922 - 35837960
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  35837922 aaggctaaaatatggttttggtccctgcaaatatgtctc 35837960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 39439035 - 39438993
Alignment:
Q  127 tgtaaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||| ||||||||||| |||||| |||||    
T  39439035 tgtaaaggctaaaatatggttttggtccctgcaaatacgtctc 39438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 1614558 - 1614595
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  1614558 aggctaaaatatggttttggtccctgcaaatatgtctc 1614595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 25988384 - 25988421
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  25988384 aggctaaaatatggttttggtccctgcaaatatgtctc 25988421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 30709645 - 30709608
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  30709645 aggctaaaatatgattttagtccctgcaaatatgtctc 30709608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 35838338 - 35838301
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  35838338 aggctaaaatatggttttggtccctgcaaatatgtctc 35838301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 38486477 - 38486514
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||||  |||||||||||    
T  38486477 aggctaaaatatgattttggtccctgtaaatatgtctc 38486514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 46759657 - 46759694
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  46759657 aggctaaaatatggttttggtccctgcaaatatgtctc 46759694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 46828942 - 46828979
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtct 168  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  46828942 aaggctaaaatatggttttggtccctgcaaatatgtct 46828979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 1614908 - 1614872
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  1614908 taaaggctaaaatatggttttggtccctgcaaatatg 1614872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 3975545 - 3975581
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  3975545 taaaggctaaaatatggttttggtccctgcaaatatg 3975581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 5233804 - 5233840
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  5233804 taaaggctaaaatatggttttggtccctgcaaatatg 5233840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 5611567 - 5611535
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatat 164  Q
    ||||||||||||||||||||||||| |||||||    
T  5611567 aggctaaaatatgattttggtccctgcaaatat 5611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 9659693 - 9659657
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  9659693 taaaggctaaaatatggttttggtccctgcaaatatg 9659657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 24717532 - 24717496
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  24717532 ggctaaaatatggttttggtccctaccaatatgtctc 24717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 25988753 - 25988717
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  25988753 taaaggctaaaatatggttttggtccctgcaaatatg 25988717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 30223457 - 30223497
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  30223457 taaaggctaaaatatggttttggtccccgcaaatatgtctc 30223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 34878129 - 34878089
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  34878129 taaaggctaaaatatggttttgatccctgcaaatatgtctc 34878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 39520394 - 39520434
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||| | ||||||||||||    
T  39520394 taaaggctaaaatatggttttggtccatccaaatatgtctc 39520434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 44568694 - 44568654
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  44568694 taaaggctaaaatatggttttgatccctgcaaatatgtctc 44568654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 48854073 - 48854037
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgt 166  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  48854073 aaaggctaaaatatgattttgatccctgcaaatatgt 48854037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 20984514 - 20984474
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  20984514 taaaggctaaaatatggttttggtccctacaaatatgtctc 20984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 2728229 - 2728268
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  2728229 aaaggctaaaatatgattttggtccctgcaaatatgtctc 2728268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 28324183 - 28324146
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtct 168  Q
    |||||||||||||| |||||||||||||||||||||||    
T  28324183 aaggctaaaatatggttttggtccctacaaatatgtct 28324146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 8298979 - 8298939
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  8298979 taaaggctaaaatatggttttggtccctgcaaatatgtctc 8298939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 9175008 - 9175048
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  9175008 taaaggctaaaatatgattttggtccttgcaaatatgtctc 9175048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 32195280 - 32195316
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||||||||||||||||    
T  32195280 ggctaaaatatggttttggtccctacaaatatgtctc 32195316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 32725903 - 32725943
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  32725903 taaaggctaaaatatggttttggtccctgcaaatatgtctc 32725943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 44997927 - 44997963
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44997927 taaaggctaaaatatgattttggtccctgcaaatatg 44997963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 7420227 - 7420266
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  7420227 aaaggctaaaatatggttttggtccctgcaaatatgtctc 7420266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 15930933 - 15930968
Alignment:
Q  134 gctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15930933 gctaaaatatgattttggttcctacaaatatgtctc 15930968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 24187900 - 24187861
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  24187900 aaaggctaaaatatgattttagtccctgcaaatatgtctc 24187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 28497252 - 28497287
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28497252 aaaggctaaaatatgattttggtccctgcaaatatg 28497287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 11019518 - 11019556
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11019518 aaggctaaaatatggttttggtccctgcaaatatgtctc 11019556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 39439922 - 39439956
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||||| ||||||||    
T  39439922 aaggctaaaatatgattttggtccctgcaaatatg 39439956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 42429756 - 42429790
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||| ||||||||||||||||||||    
T  42429756 aaggctaaaatatggttttggtccctacaaatatg 42429790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 3512267 - 3512230
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  3512267 aggctaaaatatggttttggtccctgcaaatatgtctc 3512230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 5357422 - 5357455
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  5357422 aggctaaaatatgattttggtccctgcaaatatg 5357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 9496340 - 9496377
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  9496340 aggctaaaatatggttttggtccctgcaaatatgtctc 9496377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 10292814 - 10292847
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatat 164  Q
    |||||||||||||||||||||||||| |||||||    
T  10292814 aaggctaaaatatgattttggtcccttcaaatat 10292847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 10337118 - 10337155
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  10337118 aggctaaaatatggttttggtccctgcaaatatgtctc 10337155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 17073806 - 17073843
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  17073806 aggctaaaatatggttttggtccctgcaaatatgtctc 17073843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 17574464 - 17574427
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  17574464 aggctaaaatatggttttggtccctgcaaatatgtctc 17574427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 25600229 - 25600266
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  25600229 aggctaaaatatggttttggtccctgcaaatatgtctc 25600266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 25702810 - 25702773
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  25702810 aggctaaaatatggttttggtccctgcaaatatgtctc 25702773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 35097327 - 35097364
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  35097327 aggctaaaatatggttttggtccctgcaaatatgtctc 35097364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 35346999 - 35346962
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  35346999 aggctaaaatatggttttggtccctgcaaatatgtctc 35346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 1778564 - 1778600
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  1778564 ggctaaaatatggttttggtccctgcaaatatgtctc 1778600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 7186004 - 7185968
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  7186004 ggctaaaatatggttttggtccctgcaaatatgtctc 7185968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 8298587 - 8298623
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  8298587 ggctaaaatatggttttggtccctgcaaatatgtctc 8298623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 11976369 - 11976405
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  11976369 taaaggctaaaatatggttttggtccctgcaaatatg 11976405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 14489073 - 14489037
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  14489073 ggctaaaatatggttttggtccctgcaaatatgtctc 14489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 20984142 - 20984178
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  20984142 taaaggctaaaatatggttttggtccctgcaaatatg 20984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 22650460 - 22650500
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  22650460 taaaggctaaaatatggttttagtccctgcaaatatgtctc 22650500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 27117980 - 27117944
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  27117980 taaaggctaaaatatggttttggtccctgcaaatatg 27117944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 34963664 - 34963628
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  34963664 ggctaaaatatggttttggtccctgcaaatatgtctc 34963628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 35346629 - 35346665
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  35346629 ggctaaaatatggttttggtccctgcaaatatgtctc 35346665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 42132864 - 42132900
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  42132864 ggctaaaatatggttttggtccctgcaaatatgtctc 42132900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 42133154 - 42133118
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  42133154 ggctaaaatatggttttggtccctgcaaatatgtctc 42133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 42430120 - 42430084
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  42430120 ggctaaaatatggttttggtccctgcaaatatgtctc 42430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 17765379 - 17765339
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  17765379 taaaggctaaaatatgattttggtccctgcaaatatgtctc 17765339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 24901555 - 24901522
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||||||||||||    
T  24901555 aggctaaaatatgattttggtccctacaaatatg 24901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 17765006 - 17765045
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  17765006 aaaggctaaaatatggttttggtccctgcaaatatgtctc 17765045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 19129521 - 19129486
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtc 167  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19129521 aggctaaaatatgattttggtccctgcaaatatgtc 19129486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 19690390 - 19690429
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  19690390 aaaggctaaaatatggttttggtccctgcaaatatgtctc 19690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 21385248 - 21385287
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  21385248 aaaggctaaaatatggttttggtccctgcaaatatgtctc 21385287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 3276356 - 3276318
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  3276356 aaggctaaaatatggttttggtccctgcaaatatgtctc 3276318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 3968643 - 3968681
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  3968643 aaggctaaaatatggttttggtccctgcaaatatgtctc 3968681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 11448535 - 11448573
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  11448535 aaggctaaaatatgattttagtccctgcaaatatgtctc 11448573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 12757608 - 12757646
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  12757608 aaggctaaaatatggttttggtccctgcaaatatgtctc 12757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 21385598 - 21385552
Alignment:
Q  119 tattattttgtaaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  21385598 tattattttaaaaaggctaaaatatggttttggtccctgcaaatatg 21385552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 31398543 - 31398505
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  31398543 aaggctaaaatatgattttagtccctgcaaatatgtctc 31398505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 6412217 - 6412254
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  6412217 aggctaaaatatggttttggtccctgcaaatatgtctc 6412254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 8170152 - 8170115
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  8170152 aggctaaaatatggttttggtccctgcaaatatgtctc 8170115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 10910965 - 10910928
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  10910965 aggctaaaatatggttttggtccctgcaaatatgtctc 10910928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 22543719 - 22543682
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  22543719 aggctaaaatatggttttggtccctgcaaatatgtctc 22543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 10910629 - 10910665
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| |||||||| |||||||||||||||    
T  10910629 ggctaaaatatggttttggtctctacaaatatgtctc 10910665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 11925739 - 11925775
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  11925739 ggctaatatatgattttggtccctgcaaatatgtctc 11925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 18024376 - 18024340
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtct 168  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  18024376 aggctaaaatatggttttggtccctgcaaatatgtct 18024340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 24901239 - 24901275
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  24901239 ggctaaaatatggttttggtccctgcaaatatgtctc 24901275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 47114483 - 47114523
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  47114483 taaaggctaaaatatgattttggtccctgcaaatatgtctc 47114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 35177252 - 35177291
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35177252 aaaggctaaaatatgattttggtccctgcaaatatgtctc 35177291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 38232239 - 38232277
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  38232239 aaggctaaaatatgattttggtccctgcaaatatgtctc 38232277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 15979702 - 15979665
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15979702 aggctaaaatatggttttggtccctacaaatatgtctc 15979665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 40370285 - 40370321
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||| ||||||||||||    
T  40370285 ggctaaaatatgattttggtccctgcaaatatgtctc 40370321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 44802552 - 44802512
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  44802552 taaaggctaaaatatgattttgatccctgcaaatatgtctc 44802512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 474419 - 474372
Alignment:
Q  122 tattttgtaaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||| |||| ||||||||||||| ||||||||||| ||||||||||||    
T  474419 tattatgtataggctaaaatatggttttggtccctgcaaatatgtctc 474372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 12741274 - 12741235
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  12741274 aaaggctaaaatatggttttggtccctgcaaatatgtctc 12741235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 32119587 - 32119552
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  32119587 aaaggctaaaatatgattttggtccctgcaaatatg 32119552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 164
Target Start/End: Complemental strand, 40477437 - 40477402
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatat 164  Q
    |||||||||||||||||||||||||||| |||||||    
T  40477437 taaaggctaaaatatgattttggtccctgcaaatat 40477402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 53113440 - 53113479
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  53113440 aaaggctaaaatatggttttggtccctgcaaatatgtctc 53113479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 474042 - 474080
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  474042 aaggctaaaatatggttttggtccctgcaaatatgtctc 474080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 47005152 - 47005190
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  47005152 aaggctaaaatatggttttggtccctgcaaatatgtctc 47005190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 54608873 - 54608827
Alignment:
Q  123 attttgtaaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||||    
T  54608873 attttttataggctaaaatatggttttggtccctgcaaatatgtctc 54608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 863280 - 863317
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  863280 aggctaaaatatgattttggtccatgcaaatatgtctc 863317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 12740906 - 12740943
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  12740906 aggctaaaatatggttttggtccctgcaaatatgtctc 12740943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 13514578 - 13514541
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  13514578 aggctaaaatatgattttggtacctgcaaatatgtctc 13514541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 28452377 - 28452344
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||| ||||||||||||||||||||    
T  28452377 aggctaaaatatggttttggtccctacaaatatg 28452344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 29490744 - 29490707
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29490744 aggctaaaatatggttttggtccctgcaaatatgtctc 29490707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 35936778 - 35936811
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatat 164  Q
    |||||||||||||| |||||||||||||||||||    
T  35936778 aaggctaaaatatggttttggtccctacaaatat 35936811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 40545836 - 40545803
Alignment:
Q  136 taaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||| ||||||||||||    
T  40545836 taaaatatgattttggtccctgcaaatatgtctc 40545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 44507860 - 44507827
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatat 164  Q
    |||||||||||||||||||||||||| |||||||    
T  44507860 aaggctaaaatatgattttggtccctgcaaatat 44507827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 47336582 - 47336545
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  47336582 aggctaaaatatggttttggtccctgcaaatatgtctc 47336545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 51550447 - 51550410
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  51550447 aggctaaaatatggttttggtccctgcaaatatgtctc 51550410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 4034717 - 4034753
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  4034717 ggctaaaatatggttttggtccctgcaaatatgtctc 4034753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 7957226 - 7957194
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  7957226 ggctaaaatatgattttggtccctgcaaatatg 7957194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 9261789 - 9261821
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  9261789 ggctaaaatatgattttggtccctgcaaatatg 9261821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 19844265 - 19844297
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||| ||||||||||||||||||||    
T  19844265 ggctaaaatatggttttggtccctacaaatatg 19844297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 25615971 - 25616007
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  25615971 taaaggctaaaatatggttttggtccctgcaaatatg 25616007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 26090078 - 26090042
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  26090078 ggctaaaatatggttttggtccctgcaaatatgtctc 26090042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 29678387 - 29678355
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  29678387 ggctaaaatatgattttggtccctgcaaatatg 29678355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 35533618 - 35533582
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||| |||||||| |||||||||    
T  35533618 ggctaaaatatgattttgctccctacacatatgtctc 35533582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 39436714 - 39436754
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  39436714 taaaggctaaaatatggttttagtccctgcaaatatgtctc 39436754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 43441270 - 43441306
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  43441270 ggctaaaatatggttttggtccctgcaaatatgtctc 43441306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 42823775 - 42823812
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  42823775 aggctaaaatatgattttggtccctgcaaatatgtctc 42823812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 51738136 - 51738173
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  51738136 aggctaaaatatggttttggtccctacaaatatgtctc 51738173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 14791810 - 14791770
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  14791810 taaaggctaaaatatggttttggtccctgcaaatatgtctc 14791770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 43231084 - 43231124
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  43231084 taaaggctaaaatatggttttggtccctgcaaatatgtctc 43231124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 25424315 - 25424276
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  25424315 aaaggctaaaatatggttttggtccctgcaaatatgtctc 25424276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 7639897 - 7639931
Alignment:
Q  134 gctaaaatatgattttggtccctacaaatatgtct 168  Q
    ||||||||||| |||||||||||||||||||||||    
T  7639897 gctaaaatatggttttggtccctacaaatatgtct 7639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 25423922 - 25423960
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  25423922 aaggctaaaatatggttttggtccctgcaaatatgtctc 25423960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 42848017 - 42848063
Alignment:
Q  123 attttgtaaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||| |||||||||||||||| ||||||| ||| ||||||||||||    
T  42848017 attttttaaaggctaaaatatggttttggttcctgcaaatatgtctc 42848063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 5797817 - 5797784
Alignment:
Q  136 taaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||| ||||||||||||||||||||||||    
T  5797817 taaaatatggttttggtccctacaaatatgtctc 5797784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 11693122 - 11693085
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  11693122 aggctaaaatatggttttggtccctgcaaatatgtctc 11693085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 12152494 - 12152457
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  12152494 aggctaaaatatggttttggtccctgcaaatatgtctc 12152457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 13631227 - 13631264
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  13631227 aggctaaaatatggttttggtccctgcaaatatgtctc 13631264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 14488188 - 14488151
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  14488188 aggctaaaatatggttttggtccctgcaaatatgtctc 14488151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 14594205 - 14594242
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  14594205 aggctaaaatatggttttggtccctgcaaatatgtctc 14594242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 16573369 - 16573410
Alignment:
Q  124 ttttgtaaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||| |||||||||||||||| |||||||| |||||||||||    
T  16573369 ttttttaaaggctaaaatatgcttttggtctctacaaatatg 16573410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 20291985 - 20292018
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  20291985 aggctaaaatatgattttggtccctgcaaatatg 20292018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 29420538 - 29420501
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29420538 aggctaaaatatggttttggtccctgcaaatatgtctc 29420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 35464017 - 35464054
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  35464017 aggctaaaatatggttttggtccctgcaaatatgtctc 35464054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 53916048 - 53916011
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  53916048 aggctaaaatatggttttggtccctgcaaatatgtctc 53916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 5827655 - 5827691
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  5827655 ggctaaaatatggttttggtccctgcaaatatgtctc 5827691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 13073759 - 13073795
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  13073759 ggctaaaatatggttttggtccctgcaaatatgtctc 13073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 13530717 - 13530681
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  13530717 taaaggctaaaatatggttttggtccctgcaaatatg 13530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 13764613 - 13764649
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  13764613 ggctaaaatatggttttggtccctgcaaatatgtctc 13764649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 25358540 - 25358504
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||||||  |||||||||||    
T  25358540 ggctaaaatatgattttggtccctgtaaatatgtctc 25358504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 29499178 - 29499214
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  29499178 taaaggctaaaatatggttttggtccctgcaaatatg 29499214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 30046796 - 30046760
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  30046796 taaaggctaaaatatggttttggtccctgcaaatatg 30046760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 30061137 - 30061101
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  30061137 taaaggctaaaatatggttttggtccctgcaaatatg 30061101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 31560695 - 31560659
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  31560695 ggctaaaatatggttttggtccctgcaaatatgtctc 31560659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 43231393 - 43231357
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  43231393 taaaggctaaaatatggttttggtccctgcaaatatg 43231357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 43672322 - 43672285
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgt 166  Q
    |||||||||||||||||||||||||||| |||||||||    
T  43672322 taaaggctaaaatatgattttggtccctgcaaatatgt 43672285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 31644837 - 31644877
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  31644837 taaaggctaaaatatggttttggtccctgcaaatatgtctc 31644877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 3172017 - 3172052
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||||| ||||||||    
T  3172017 aaaggctaaaatatgattttggtccctgcaaatatg 3172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 16673408 - 16673447
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  16673408 aaaggctaaaatatggttttggtccctgcaaatatgtctc 16673447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 25705082 - 25705121
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  25705082 aaaggctaaaatatggttttggtccctgcaaatatgtctc 25705121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 4424187 - 4424149
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  4424187 aaggctaaaatatggttttggtccctgcaaatatgtctc 4424149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 33576119 - 33576081
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  33576119 aaggctaaaatatggttttggtccctgcaaatatgtctc 33576081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 40125291 - 40125257
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||||| ||||||||    
T  40125291 aaggctaaaatatgattttggtccctgcaaatatg 40125257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 13215059 - 13215096
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  13215059 aggctaaaatatggttttggtccctgcaaatatgtctc 13215096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 20131316 - 20131353
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20131316 aggctaaaatatggttttggtccctgcaaatatgtctc 20131353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 29182164 - 29182201
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgt 166  Q
    |||||||||||||||||||||||||| | |||||||||    
T  29182164 taaaggctaaaatatgattttggtccttgcaaatatgt 29182201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 41451836 - 41451873
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  41451836 aggctaaaatatggttttggtccctgcaaatatgtctc 41451873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 44559061 - 44559098
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  44559061 aggctaaaatatggttttggtccctgcaaatatgtctc 44559098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 18113454 - 18113422
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||| ||||||||||||||||||||    
T  18113454 ggctaaaatatggttttggtccctacaaatatg 18113422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 23732039 - 23732075
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  23732039 ggctaaaatatgattttgatccctgcaaatatgtctc 23732075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 27109073 - 27109105
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||| ||||||||||||||||||||    
T  27109073 ggctaaaatatggttttggtccctacaaatatg 27109105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 34317798 - 34317830
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  34317798 ggctaaaatatgattttggtccctgcaaatatg 34317830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 34318083 - 34318051
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||| ||||||||||||||||||||    
T  34318083 ggctaaaatatggttttggtccctacaaatatg 34318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 34964159 - 34964123
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  34964159 ggctaaaatatggttttggtccctgcaaatatgtctc 34964123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 37228730 - 37228766
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgt 166  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37228730 aaaggctaaaatatggttttggtccctgcaaatatgt 37228766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 42695868 - 42695904
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  42695868 ggctaaaatatggttttggtccctgcaaatatgtctc 42695904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 47921 - 47961
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  47921 taaaggctaaaatatggttttggtccctgcaaatatgtctc 47961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 223173 - 223136
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  223173 aggctaaaatatggttttggtccctgcaaatatgtctc 223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 37271710 - 37271670
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  37271710 taaaggctaaaatatggttttggtccctgcaaatatgtctc 37271670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 42553642 - 42553678
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||| ||||||||||||    
T  42553642 ggctaaaatatgattttggtccctgcaaatatgtctc 42553678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 1381244 - 1381283
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  1381244 aaaggctaaaatatggttttggtccctgcaaatatgtctc 1381283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 17070532 - 17070571
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  17070532 aaaggctaaaatatggttttggtccctgcaaatatgtctc 17070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 18258530 - 18258491
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  18258530 aaaggctaaaatatggttttggtccctgcaaatatgtctc 18258491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 19565465 - 19565503
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  19565465 aaggctaaaatatggttttggtccctgcaaatatgtctc 19565503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 27571191 - 27571157
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatat 164  Q
    ||||||||||||||||||||||||||| |||||||    
T  27571191 aaaggctaaaatatgattttggtccctgcaaatat 27571157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 34911890 - 34911856
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatat 164  Q
    ||||||||||||||||||||||||||| |||||||    
T  34911890 aaaggctaaaatatgattttggtccctgcaaatat 34911856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 5917125 - 5917162
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  5917125 aggctaaaatatggttttggtccctgcaaatatgtctc 5917162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 15599764 - 15599797
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||| ||||||||||||||||||||    
T  15599764 aggctaaaatatgcttttggtccctacaaatatg 15599797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 17070864 - 17070827
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  17070864 aggctaaaatatggttttagtccctacaaatatgtctc 17070827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 19685016 - 19685053
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  19685016 aggctaaaatatggttttggtccctgcaaatatgtctc 19685053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 20690732 - 20690769
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20690732 aggctaaaatatggttttggtccctgcaaatatgtctc 20690769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 35877053 - 35877016
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  35877053 aggctaaaatatggttttggtccctgcaaatatgtctc 35877016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 45138 - 45174
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  45138 ggctaaaatatggttttggtccctgcaaatatgtctc 45174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 21050575 - 21050607
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||| |||||||||||||||    
T  21050575 ggctaaaatatgattttagtccctacaaatatg 21050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 26071620 - 26071580
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  26071620 taaaggttaaaatatgattttgatccctgcaaatatgtctc 26071580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 26133417 - 26133377
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  26133417 taaaggctaaaatatggttttagtccctgcaaatatgtctc 26133377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 30888160 - 30888196
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  30888160 ggctaaaatatggttttggtccctgcaaatatgtctc 30888196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 35928458 - 35928422
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  35928458 ggctaaaatatggttttggtccctgcaaatatgtctc 35928422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 40038858 - 40038826
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  40038858 ggctaaaatatgattttggtccctgcaaatatg 40038826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 20948755 - 20948791
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20948755 ggctaaaatatggttttggtccctacaaatatgtctc 20948791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 33000673 - 33000633
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  33000673 taaaggctaaaatatggttttggtccctgcaaatatgtctc 33000633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 3247195 - 3247234
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  3247195 aaaggctaaaatatggttttggtccctgcaaatatgtctc 3247234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 19720709 - 19720748
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  19720709 aaaggctaaaatatggttttggtccctgcaaatatgtctc 19720748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 24654170 - 24654131
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24654170 aaaggctaaaatatggttttggtccctgcaaatatgtctc 24654131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 30322926 - 30322965
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  30322926 aaaggctaaaatatggttttggtccctgcaaatatgtctc 30322965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 34002632 - 34002671
Alignment:
Q  130 aaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  34002632 aaaggctaaagtatgattttggtccctgcaaatatgtctc 34002671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 12360970 - 12360932
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  12360970 aaggctaaaatatggttttggtccctgcaaatatgtctc 12360932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 15526364 - 15526326
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  15526364 aaggctaaaatatggttttggtccctgcaaatatgtctc 15526326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 33234922 - 33234880
Alignment:
Q  123 attttgtaaaggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||    
T  33234922 attttttaatggctaaaatatgattttggtccctgcaaatatg 33234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 7867359 - 7867322
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtct 168  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  7867359 aaggctaaaatatggttttggtccctgcaaatatgtct 7867322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 8140433 - 8140470
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  8140433 aggctaaaatatggttttggtccctgcaaatatgtctc 8140470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 10887599 - 10887562
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  10887599 aggctaaaatatggttttggtccctgcaaatatgtctc 10887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 26324584 - 26324617
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  26324584 aggctaaaatatgattttggtccctgcaaatatg 26324617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 30323294 - 30323261
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  30323294 aggctaaaatatgattttggtccctgcaaatatg 30323261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 31404429 - 31404462
Alignment:
Q  136 taaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||||||||||| ||||||||||||    
T  31404429 taaaatatgattttggtccctgcaaatatgtctc 31404462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 31404723 - 31404686
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  31404723 aggctaaaatatggttttggtccctacaaacatgtctc 31404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 35056895 - 35056862
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatg 165  Q
    ||||||||||||||||||||||||| ||||||||    
T  35056895 aggctaaaatatgattttggtccctgcaaatatg 35056862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 36912852 - 36912889
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  36912852 aggctaaaatatggttttggtccctgcaaatatgtctc 36912889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 39747836 - 39747799
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  39747836 aggctaaaatatggttttggtccctgcaaatatgtctc 39747799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 42482978 - 42483015
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  42482978 aggctaaaatatggttttggtccctgcaaatatgtctc 42483015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 45380271 - 45380308
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  45380271 aggctaaaatatggttttggtccctgcaaatatgtctc 45380308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 45638895 - 45638858
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  45638895 aggctaaaatatggttttggtccctgcaaatatgtctc 45638858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 10631164 - 10631200
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  10631164 ggctaaaatatggttttggtccctgcaaatatgtctc 10631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 12322970 - 12322934
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  12322970 ggctaaaatatggttttggtccctgcaaatatgtctc 12322934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 17130087 - 17130047
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  17130087 taaagactaaaatatggttttggtccctgcaaatatgtctc 17130047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 24977778 - 24977814
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  24977778 ggctaaaatatggttttggtccctgcaaatatgtctc 24977814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 27264276 - 27264244
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatat 164  Q
    ||||||||||||||||||||||||| |||||||    
T  27264276 aggctaaaatatgattttggtccctgcaaatat 27264244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 32035789 - 32035753
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtct 168  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  32035789 aggctaaaatatggttttggtccctgcaaatatgtct 32035753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 35056530 - 35056566
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  35056530 ggctaaaatatggttttggtccctgcaaatatgtctc 35056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 38136981 - 38136949
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  38136981 ggctaaaatatgattttggtccctgcaaatatg 38136949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 40718110 - 40718146
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40718110 ggctaaaatatggttttggtccctgcaaatatgtctc 40718146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 45290453 - 45290493
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  45290453 taaaggctaaaatatggttttagtccctgcaaatatgtctc 45290493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 45380636 - 45380604
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||||||||||| ||||||||    
T  45380636 ggctaaaatatgattttggtccctgcaaatatg 45380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 47819600 - 47819564
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatg 165  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  47819600 taaaggctaaaatatggttttggtccctgcaaatatg 47819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 48334192 - 48334160
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatat 164  Q
    ||||||||||||| |||||||||||||||||||    
T  48334192 aggctaaaatatgcttttggtccctacaaatat 48334160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 49073687 - 49073727
Alignment:
Q  129 taaaggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||| ||||||||| | ||||||||||||    
T  49073687 taaaggctaaaatatggttttggtccttgcaaatatgtctc 49073727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 51986584 - 51986540
Alignment:
Q  123 attttgtaaaggctaaaatatgattttggtccctacaaatatgtc 167  Q
    ||||| |||||| ||||||||| |||| |||||||||||||||||    
T  51986584 attttttaaaggttaaaatatggtttttgtccctacaaatatgtc 51986540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 7266 - 7229
Alignment:
Q  131 aaggctaaaatatgattttggtccctacaaatatgtct 168  Q
    ||||||||||||||||||||||| || |||||||||||    
T  7266 aaggctaaaatatgattttggtctctgcaaatatgtct 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 27365 - 27328
Alignment:
Q  132 aggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  27365 aggctaaaatatggttttggtccctgcaaatatgtctc 27328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 16724 - 16760
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  16724 ggctaaaatatgattttggtccctgcaaatatatctc 16760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 2883 - 2847
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  2883 ggctaaaatatggttttggtccctgcaaatatgtctc 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 148282 - 148246
Alignment:
Q  133 ggctaaaatatgattttggtccctacaaatatgtctc 169  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  148282 ggctaaaatatggttttggtccctgcaaatatgtctc 148246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University