View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18564_low_3 (Length: 509)

Name: NF18564_low_3
Description: NF18564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18564_low_3
NF18564_low_3
[»] chr1 (80 HSPs)
chr1 (20-292)||(4428704-4428990)
chr1 (294-433)||(10577676-10577814)
chr1 (294-449)||(25934574-25934745)
chr1 (289-449)||(46348319-46348478)
chr1 (294-433)||(41597411-41597549)
chr1 (293-400)||(12918957-12919064)
chr1 (294-400)||(30749852-30749958)
chr1 (294-400)||(30771303-30771409)
chr1 (294-392)||(37598852-37598949)
chr1 (295-420)||(42359391-42359516)
chr1 (294-365)||(32461394-32461465)
chr1 (294-449)||(51409983-51410143)
chr1 (295-420)||(1486646-1486776)
chr1 (294-392)||(18337349-18337447)
chr1 (294-431)||(22515828-22515964)
chr1 (450-509)||(4428650-4428709)
chr1 (298-392)||(5898211-5898305)
chr1 (295-420)||(29163323-29163448)
chr1 (294-449)||(36878419-36878584)
chr1 (288-364)||(47989556-47989632)
chr1 (307-394)||(40181889-40181976)
chr1 (294-420)||(1815249-1815375)
chr1 (294-392)||(40258874-40258972)
chr1 (294-364)||(40917808-40917878)
chr1 (456-509)||(4439879-4439932)
chr1 (294-392)||(52903269-52903364)
chr1 (294-420)||(2896062-2896188)
chr1 (294-364)||(9828103-9828173)
chr1 (294-394)||(27965941-27966039)
chr1 (297-398)||(39130711-39130812)
chr1 (294-358)||(31015091-31015155)
chr1 (294-356)||(6427531-6427593)
chr1 (295-392)||(16297223-16297322)
chr1 (294-412)||(38078602-38078720)
chr1 (294-412)||(45534131-45534248)
chr1 (294-435)||(6414932-6415082)
chr1 (294-394)||(7918155-7918252)
chr1 (294-394)||(34712324-34712424)
chr1 (347-394)||(1864874-1864921)
chr1 (157-224)||(4440004-4440071)
chr1 (294-365)||(36906055-36906125)
chr1 (298-364)||(9629834-9629900)
chr1 (294-394)||(9690214-9690313)
chr1 (338-392)||(13997903-13997957)
chr1 (306-392)||(18190061-18190147)
chr1 (294-360)||(18556386-18556452)
chr1 (294-364)||(21032265-21032335)
chr1 (348-398)||(39953141-39953191)
chr1 (291-329)||(48415664-48415702)
chr1 (345-394)||(14332634-14332683)
chr1 (472-509)||(18991223-18991260)
chr1 (353-394)||(34371731-34371772)
chr1 (353-394)||(44482248-44482289)
chr1 (295-394)||(11412709-11412809)
chr1 (347-391)||(13436479-13436523)
chr1 (294-342)||(15765828-15765876)
chr1 (305-364)||(6612112-6612171)
chr1 (347-394)||(9709838-9709885)
chr1 (342-393)||(17705576-17705626)
chr1 (357-412)||(34315712-34315767)
chr1 (294-364)||(34741894-34741964)
chr1 (315-394)||(43492456-43492535)
chr1 (294-344)||(1704936-1704986)
chr1 (294-364)||(5944342-5944412)
chr1 (294-336)||(6574053-6574095)
chr1 (305-375)||(8842666-8842736)
chr1 (415-449)||(10577814-10577848)
chr1 (348-422)||(12443456-12443529)
chr1 (323-373)||(21530728-21530778)
chr1 (298-392)||(26830608-26830701)
chr1 (294-364)||(31694640-31694710)
chr1 (415-449)||(38078735-38078769)
chr1 (353-394)||(20157350-20157391)
chr1 (343-392)||(22881606-22881655)
chr1 (353-422)||(24577186-24577255)
chr1 (353-394)||(25361904-25361945)
chr1 (416-449)||(48548042-48548075)
chr1 (294-334)||(10572535-10572575)
chr1 (294-365)||(32899937-32900009)
chr1 (294-330)||(35702543-35702579)
[»] chr3 (69 HSPs)
chr3 (294-449)||(13845466-13845612)
chr3 (294-420)||(35222930-35223056)
chr3 (312-395)||(2941575-2941658)
chr3 (294-392)||(40993276-40993374)
chr3 (353-449)||(14027961-14028066)
chr3 (294-449)||(20503430-20503583)
chr3 (294-392)||(55401095-55401193)
chr3 (295-392)||(28918021-28918120)
chr3 (294-394)||(8789489-8789591)
chr3 (294-392)||(10954972-10955073)
chr3 (292-377)||(15864868-15864952)
chr3 (294-392)||(18426969-18427067)
chr3 (294-422)||(27505236-27505369)
chr3 (294-364)||(41961580-41961650)
chr3 (295-364)||(4987222-4987291)
chr3 (300-388)||(3631708-3631796)
chr3 (450-509)||(9494846-9494905)
chr3 (306-376)||(7171537-7171607)
chr3 (293-351)||(15999950-16000008)
chr3 (294-364)||(25064966-25065036)
chr3 (332-394)||(25093520-25093582)
chr3 (294-394)||(11251996-11252094)
chr3 (292-446)||(24633341-24633498)
chr3 (294-394)||(4466541-4466641)
chr3 (295-394)||(24204983-24205082)
chr3 (295-390)||(25775531-25775624)
chr3 (295-392)||(29508464-29508567)
chr3 (294-393)||(8842348-8842447)
chr3 (294-433)||(26492146-26492284)
chr3 (294-357)||(34185053-34185116)
chr3 (456-507)||(41980875-41980926)
chr3 (294-364)||(14209172-14209242)
chr3 (347-392)||(7928470-7928515)
chr3 (460-509)||(41985647-41985696)
chr3 (156-212)||(9344001-9344057)
chr3 (348-412)||(13414469-13414533)
chr3 (294-358)||(14216957-14217021)
chr3 (294-358)||(14223086-14223150)
chr3 (292-363)||(37077418-37077490)
chr3 (294-414)||(51206294-51206414)
chr3 (294-364)||(15796224-15796294)
chr3 (332-394)||(45451571-45451633)
chr3 (347-445)||(49505148-49505245)
chr3 (347-420)||(8383249-8383322)
chr3 (338-378)||(6780404-6780444)
chr3 (457-509)||(9336559-9336611)
chr3 (294-358)||(10690193-10690257)
chr3 (297-392)||(11665964-11666070)
chr3 (320-364)||(14832158-14832202)
chr3 (332-392)||(20389636-20389694)
chr3 (293-394)||(32804484-32804581)
chr3 (450-509)||(9407385-9407444)
chr3 (450-509)||(9655395-9655454)
chr3 (294-365)||(55213020-55213091)
chr3 (415-449)||(750698-750732)
chr3 (294-336)||(4990913-4990955)
chr3 (347-393)||(11507469-11507515)
chr3 (352-398)||(38731232-38731278)
chr3 (294-344)||(40052380-40052430)
chr3 (333-394)||(7614396-7614456)
chr3 (468-509)||(9343864-9343905)
chr3 (468-509)||(9352920-9352961)
chr3 (416-449)||(17568750-17568783)
chr3 (294-342)||(1389908-1389956)
chr3 (294-365)||(25074841-25074913)
chr3 (356-420)||(26508102-26508166)
chr3 (294-365)||(27903684-27903756)
chr3 (293-337)||(34910392-34910436)
chr3 (294-354)||(49651717-49651777)
[»] chr2 (60 HSPs)
chr2 (294-436)||(24009274-24009413)
chr2 (294-420)||(20242668-20242794)
chr2 (294-422)||(36096305-36096444)
chr2 (295-417)||(2438661-2438783)
chr2 (294-449)||(41843405-41843564)
chr2 (294-449)||(37558941-37559095)
chr2 (294-378)||(28596503-28596587)
chr2 (294-433)||(34784912-34785061)
chr2 (294-449)||(38117100-38117260)
chr2 (294-420)||(18840954-18841080)
chr2 (456-509)||(20694345-20694398)
chr2 (294-363)||(26769571-26769640)
chr2 (294-375)||(34993923-34994004)
chr2 (301-392)||(5040754-5040845)
chr2 (312-391)||(5367213-5367292)
chr2 (306-392)||(12224243-12224329)
chr2 (294-392)||(15972893-15972991)
chr2 (294-364)||(30717460-30717530)
chr2 (294-364)||(35056927-35056997)
chr2 (294-364)||(37419802-37419872)
chr2 (297-394)||(37411188-37411285)
chr2 (295-363)||(19942314-19942382)
chr2 (294-349)||(18054717-18054772)
chr2 (294-359)||(11223794-11223858)
chr2 (353-433)||(18054803-18054883)
chr2 (294-358)||(42511323-42511387)
chr2 (294-364)||(32749755-32749825)
chr2 (347-400)||(20922922-20922975)
chr2 (300-420)||(21624258-21624374)
chr2 (294-363)||(27084318-27084387)
chr2 (294-378)||(34006931-34007016)
chr2 (347-392)||(34691799-34691844)
chr2 (347-392)||(34714211-34714256)
chr2 (293-329)||(18255944-18255980)
chr2 (361-433)||(21616742-21616813)
chr2 (293-364)||(23354581-23354652)
chr2 (332-392)||(30404829-30404889)
chr2 (319-411)||(43585971-43586063)
chr2 (353-420)||(15909632-15909699)
chr2 (294-364)||(22084757-22084830)
chr2 (313-392)||(31808097-31808176)
chr2 (354-420)||(11223864-11223930)
chr2 (295-357)||(15657930-15657992)
chr2 (415-449)||(21374773-21374807)
chr2 (295-364)||(23354926-23354995)
chr2 (415-449)||(26769463-26769497)
chr2 (306-388)||(29176446-29176528)
chr2 (294-364)||(44860379-44860449)
chr2 (347-392)||(19536391-19536436)
chr2 (343-419)||(31284041-31284118)
chr2 (353-394)||(44860338-44860379)
chr2 (297-433)||(6940235-6940370)
chr2 (294-342)||(10535686-10535734)
chr2 (305-357)||(14996171-14996222)
chr2 (354-394)||(18889592-18889632)
chr2 (417-449)||(27447082-27447114)
chr2 (359-419)||(28524419-28524479)
chr2 (417-449)||(31283994-31284026)
chr2 (354-394)||(38355888-38355928)
chr2 (337-377)||(40361738-40361778)
[»] chr8 (53 HSPs)
chr8 (294-433)||(43737752-43737892)
chr8 (294-412)||(3951477-3951596)
chr8 (294-433)||(34450962-34451116)
chr8 (295-394)||(3025569-3025668)
chr8 (294-449)||(36450695-36450849)
chr8 (294-394)||(33405325-33405425)
chr8 (295-378)||(926730-926813)
chr8 (294-395)||(26902105-26902217)
chr8 (294-449)||(14134663-14134817)
chr8 (295-394)||(20679337-20679436)
chr8 (298-449)||(31109463-31109613)
chr8 (296-394)||(40332209-40332307)
chr8 (294-363)||(29447040-29447109)
chr8 (297-436)||(5813569-5813707)
chr8 (294-364)||(22652035-22652105)
chr8 (294-364)||(29510234-29510304)
chr8 (294-394)||(4786279-4786379)
chr8 (294-394)||(37283756-37283851)
chr8 (301-375)||(126295-126369)
chr8 (294-392)||(18407739-18407837)
chr8 (294-392)||(31557016-31557114)
chr8 (294-405)||(18964184-18964308)
chr8 (348-422)||(13844591-13844665)
chr8 (294-364)||(15816059-15816129)
chr8 (294-358)||(8343381-8343445)
chr8 (294-358)||(16641910-16641974)
chr8 (293-365)||(24205748-24205820)
chr8 (346-422)||(31236570-31236646)
chr8 (294-357)||(6065587-6065650)
chr8 (294-364)||(21465471-21465541)
chr8 (294-364)||(28745557-28745627)
chr8 (294-364)||(29447503-29447573)
chr8 (348-394)||(34897103-34897149)
chr8 (294-399)||(24413500-24413605)
chr8 (306-378)||(8293859-8293931)
chr8 (305-353)||(22943301-22943349)
chr8 (294-377)||(39820464-39820546)
chr8 (294-357)||(4673355-4673418)
chr8 (294-365)||(11803317-11803388)
chr8 (353-392)||(11927086-11927125)
chr8 (338-449)||(22595952-22596068)
chr8 (323-394)||(38079017-38079088)
chr8 (346-392)||(4948672-4948718)
chr8 (353-391)||(8847277-8847315)
chr8 (294-336)||(13436911-13436953)
chr8 (338-392)||(20873089-20873143)
chr8 (318-364)||(26915200-26915246)
chr8 (293-330)||(13009422-13009459)
chr8 (338-390)||(9414860-9414912)
chr8 (298-358)||(22197676-22197736)
chr8 (348-400)||(28747430-28747482)
chr8 (309-373)||(44462151-44462215)
chr8 (309-373)||(44469684-44469748)
[»] chr5 (57 HSPs)
chr5 (294-433)||(6401478-6401627)
chr5 (297-420)||(30098982-30099105)
chr5 (294-421)||(21814252-21814390)
chr5 (294-392)||(21576686-21576784)
chr5 (294-397)||(42029767-42029870)
chr5 (295-394)||(30502330-30502429)
chr5 (295-394)||(30542673-30542772)
chr5 (295-433)||(21190998-21191135)
chr5 (354-449)||(32426870-32426965)
chr5 (294-392)||(43564901-43564999)
chr5 (294-394)||(28588615-28588715)
chr5 (296-412)||(19452998-19453125)
chr5 (296-368)||(39268541-39268613)
chr5 (357-412)||(39758272-39758327)
chr5 (294-364)||(21522809-21522879)
chr5 (294-364)||(21533375-21533445)
chr5 (294-364)||(21542089-21542159)
chr5 (289-394)||(17123066-17123170)
chr5 (298-394)||(21194068-21194164)
chr5 (306-378)||(26312803-26312875)
chr5 (294-422)||(42893350-42893478)
chr5 (294-420)||(31084315-31084446)
chr5 (295-394)||(18421779-18421882)
chr5 (294-364)||(39698600-39698670)
chr5 (294-394)||(14873535-14873640)
chr5 (295-394)||(23015926-23016030)
chr5 (295-358)||(43001859-43001922)
chr5 (325-375)||(23012380-23012430)
chr5 (297-389)||(4105282-4105374)
chr5 (296-364)||(18592132-18592200)
chr5 (294-394)||(27932253-27932353)
chr5 (294-358)||(30098391-30098455)
chr5 (305-364)||(15382533-15382592)
chr5 (294-364)||(7677764-7677834)
chr5 (294-420)||(32630676-32630802)
chr5 (353-394)||(3966521-3966562)
chr5 (343-392)||(15884008-15884057)
chr5 (295-364)||(19579760-19579829)
chr5 (294-433)||(6770523-6770654)
chr5 (343-394)||(16203785-16203836)
chr5 (294-365)||(16304367-16304438)
chr5 (347-422)||(34879340-34879415)
chr5 (353-392)||(37328844-37328883)
chr5 (295-342)||(41995534-41995581)
chr5 (294-364)||(3966562-3966632)
chr5 (342-392)||(6247642-6247692)
chr5 (415-449)||(15382423-15382457)
chr5 (294-344)||(23289999-23290049)
chr5 (295-353)||(24238603-24238661)
chr5 (294-364)||(32766873-32766943)
chr5 (297-359)||(36642696-36642757)
chr5 (353-394)||(6471889-6471930)
chr5 (294-357)||(19820329-19820389)
chr5 (353-394)||(41091257-41091298)
chr5 (301-345)||(17088358-17088402)
chr5 (294-330)||(35017125-35017161)
chr5 (294-358)||(40000494-40000558)
[»] chr4 (65 HSPs)
chr4 (294-433)||(5414102-5414251)
chr4 (294-420)||(23292927-23293053)
chr4 (294-400)||(19097836-19097941)
chr4 (298-420)||(49431017-49431140)
chr4 (293-364)||(30982807-30982878)
chr4 (294-392)||(28964189-28964287)
chr4 (294-394)||(8423659-8423759)
chr4 (294-412)||(46083921-46084050)
chr4 (294-364)||(12323968-12324038)
chr4 (294-376)||(12895215-12895297)
chr4 (294-392)||(34306745-34306843)
chr4 (294-392)||(715546-715646)
chr4 (294-392)||(752872-752972)
chr4 (294-363)||(24613631-24613700)
chr4 (294-394)||(35161054-35161154)
chr4 (294-377)||(2361916-2361999)
chr4 (297-392)||(12797282-12797377)
chr4 (338-417)||(54580008-54580087)
chr4 (294-392)||(16073414-16073512)
chr4 (294-392)||(35157926-35158024)
chr4 (294-394)||(36635342-36635448)
chr4 (294-358)||(3947702-3947766)
chr4 (293-359)||(848015-848081)
chr4 (294-364)||(19482727-19482797)
chr4 (294-364)||(19500788-19500858)
chr4 (323-392)||(29205464-29205533)
chr4 (335-392)||(36509074-36509131)
chr4 (343-392)||(40179626-40179675)
chr4 (288-384)||(20950362-20950458)
chr4 (294-393)||(4672026-4672125)
chr4 (305-412)||(21945503-21945610)
chr4 (296-347)||(28084589-28084640)
chr4 (294-353)||(29205527-29205586)
chr4 (294-364)||(53381531-53381602)
chr4 (294-356)||(32273462-32273524)
chr4 (358-420)||(40613442-40613504)
chr4 (294-392)||(42640549-42640642)
chr4 (295-392)||(4157169-4157266)
chr4 (295-392)||(4157456-4157553)
chr4 (293-358)||(14465005-14465070)
chr4 (353-449)||(30298910-30299006)
chr4 (353-449)||(30327778-30327874)
chr4 (353-433)||(13783261-13783340)
chr4 (294-354)||(18966567-18966627)
chr4 (290-329)||(4383449-4383488)
chr4 (343-394)||(10499260-10499311)
chr4 (348-411)||(16189710-16189773)
chr4 (294-369)||(23861370-23861445)
chr4 (294-364)||(24343560-24343631)
chr4 (353-400)||(44132644-44132691)
chr4 (332-394)||(8402721-8402783)
chr4 (332-394)||(9996858-9996920)
chr4 (294-364)||(22234820-22234890)
chr4 (415-449)||(23293065-23293099)
chr4 (298-364)||(30838269-30838335)
chr4 (294-351)||(3064869-3064926)
chr4 (347-420)||(6879459-6879532)
chr4 (353-449)||(12895116-12895210)
chr4 (295-344)||(22440559-22440608)
chr4 (349-405)||(42014965-42015022)
chr4 (294-330)||(5775305-5775341)
chr4 (354-394)||(5775359-5775399)
chr4 (332-404)||(13307885-13307957)
chr4 (353-436)||(22234890-22234973)
chr4 (294-394)||(30103298-30103397)
[»] chr6 (67 HSPs)
chr6 (294-420)||(18367828-18367965)
chr6 (294-421)||(16488520-16488658)
chr6 (294-433)||(13789134-13789272)
chr6 (294-433)||(13797753-13797891)
chr6 (294-449)||(17841530-17841684)
chr6 (294-392)||(34595154-34595252)
chr6 (293-433)||(9658859-9658999)
chr6 (294-449)||(28152063-28152216)
chr6 (294-417)||(17327591-17327719)
chr6 (296-422)||(32978842-32978969)
chr6 (296-394)||(7996325-7996419)
chr6 (296-394)||(8022382-8022476)
chr6 (295-358)||(12696383-12696446)
chr6 (293-445)||(5626640-5626792)
chr6 (294-412)||(7377979-7378097)
chr6 (294-392)||(33001230-33001328)
chr6 (295-394)||(7265535-7265634)
chr6 (294-364)||(8365449-8365519)
chr6 (294-364)||(10339055-10339125)
chr6 (294-392)||(28715315-28715413)
chr6 (294-433)||(8776909-8777052)
chr6 (294-394)||(13360314-13360413)
chr6 (294-358)||(31384984-31385048)
chr6 (294-394)||(32511607-32511707)
chr6 (294-373)||(4877982-4878060)
chr6 (294-364)||(16766756-16766826)
chr6 (343-420)||(19040344-19040421)
chr6 (341-393)||(7740660-7740712)
chr6 (294-394)||(13364646-13364746)
chr6 (336-375)||(30851637-30851676)
chr6 (294-409)||(4388088-4388198)
chr6 (294-420)||(7977771-7977897)
chr6 (353-422)||(26562679-26562748)
chr6 (294-364)||(34446618-34446689)
chr6 (294-364)||(7248417-7248487)
chr6 (294-364)||(9107300-9107370)
chr6 (294-392)||(24645501-24645599)
chr6 (353-394)||(9025494-9025535)
chr6 (338-394)||(31579212-31579266)
chr6 (415-447)||(4118412-4118444)
chr6 (294-449)||(16833267-16833426)
chr6 (305-392)||(853811-853898)
chr6 (347-394)||(5732504-5732551)
chr6 (294-377)||(6898222-6898305)
chr6 (353-392)||(7027262-7027301)
chr6 (294-329)||(10649371-10649406)
chr6 (415-449)||(7938062-7938096)
chr6 (294-364)||(8714039-8714109)
chr6 (353-419)||(8931602-8931668)
chr6 (353-419)||(9107370-9107436)
chr6 (352-394)||(9629401-9629443)
chr6 (348-378)||(21924930-21924960)
chr6 (294-348)||(31959214-31959268)
chr6 (450-491)||(7029850-7029891)
chr6 (296-394)||(8389411-8389513)
chr6 (450-491)||(9159533-9159574)
chr6 (450-491)||(9170854-9170895)
chr6 (353-394)||(9617452-9617493)
chr6 (339-392)||(29020932-29020985)
chr6 (332-412)||(1191679-1191759)
chr6 (348-392)||(1700372-1700416)
chr6 (417-449)||(5970183-5970215)
chr6 (294-342)||(7938170-7938218)
chr6 (353-433)||(9027158-9027237)
chr6 (313-365)||(9522949-9523001)
chr6 (294-358)||(9629448-9629512)
chr6 (298-358)||(24138485-24138545)
[»] chr7 (58 HSPs)
chr7 (294-400)||(18212974-18213080)
chr7 (296-405)||(39138451-39138560)
chr7 (294-449)||(15680773-15680927)
chr7 (294-394)||(32287404-32287504)
chr7 (294-449)||(9778454-9778623)
chr7 (294-394)||(20549809-20549909)
chr7 (294-394)||(21880170-21880270)
chr7 (294-420)||(5409772-5409903)
chr7 (294-375)||(598245-598326)
chr7 (294-392)||(43027405-43027508)
chr7 (294-364)||(24339701-24339771)
chr7 (294-377)||(21864843-21864926)
chr7 (294-358)||(32093955-32094020)
chr7 (322-394)||(5835265-5835337)
chr7 (343-394)||(9482952-9483003)
chr7 (304-394)||(12278853-12278943)
chr7 (294-361)||(25822717-25822784)
chr7 (305-392)||(26733324-26733411)
chr7 (294-420)||(22484017-22484143)
chr7 (294-388)||(33994236-33994330)
chr7 (294-398)||(18035806-18035909)
chr7 (294-376)||(1433490-1433577)
chr7 (301-392)||(41020516-41020607)
chr7 (294-423)||(21568562-21568692)
chr7 (294-420)||(25481894-25482020)
chr7 (304-394)||(27093364-27093454)
chr7 (304-394)||(27184847-27184937)
chr7 (294-394)||(1401043-1401141)
chr7 (294-363)||(7438766-7438835)
chr7 (345-398)||(19213817-19213870)
chr7 (353-394)||(22602710-22602751)
chr7 (294-351)||(29763130-29763187)
chr7 (343-391)||(640134-640182)
chr7 (294-365)||(7133213-7133285)
chr7 (296-336)||(8842282-8842322)
chr7 (298-358)||(13770750-13770810)
chr7 (294-378)||(24105712-24105796)
chr7 (353-449)||(25791617-25791711)
chr7 (347-394)||(3721111-3721158)
chr7 (294-361)||(4794951-4795018)
chr7 (313-392)||(8234166-8234245)
chr7 (355-398)||(17851445-17851488)
chr7 (294-356)||(17852056-17852118)
chr7 (294-336)||(35862027-35862069)
chr7 (367-412)||(1656676-1656721)
chr7 (294-375)||(3554447-3554528)
chr7 (293-358)||(20545184-20545249)
chr7 (349-398)||(24146830-24146879)
chr7 (295-364)||(26033392-26033461)
chr7 (302-371)||(41918906-41918975)
chr7 (294-358)||(2334314-2334378)
chr7 (294-342)||(6490786-6490834)
chr7 (293-449)||(7197237-7197392)
chr7 (332-364)||(9933332-9933364)
chr7 (294-378)||(10359633-10359717)
chr7 (294-378)||(11738152-11738236)
chr7 (294-342)||(28155624-28155672)
chr7 (353-449)||(32308084-32308179)
[»] scaffold0623 (1 HSPs)
scaffold0623 (294-420)||(5926-6063)
[»] scaffold0652 (1 HSPs)
scaffold0652 (294-392)||(403-501)
[»] scaffold0361 (1 HSPs)
scaffold0361 (294-436)||(14506-14645)
[»] scaffold0116 (1 HSPs)
scaffold0116 (353-433)||(9878-9957)
[»] scaffold0306 (1 HSPs)
scaffold0306 (295-364)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (295-364)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (294-378)||(45471-45555)
[»] scaffold0050 (1 HSPs)
scaffold0050 (296-392)||(70298-70394)
[»] scaffold0053 (1 HSPs)
scaffold0053 (294-377)||(8833-8916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (294-364)||(241653-241723)
[»] scaffold0793 (1 HSPs)
scaffold0793 (294-392)||(4822-4922)
[»] scaffold0475 (1 HSPs)
scaffold0475 (294-377)||(3343-3426)
[»] scaffold0380 (1 HSPs)
scaffold0380 (294-364)||(8649-8719)
[»] scaffold0019 (1 HSPs)
scaffold0019 (294-364)||(71784-71854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (293-359)||(92875-92941)
[»] scaffold0512 (1 HSPs)
scaffold0512 (294-375)||(4977-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (294-364)||(8565-8635)
[»] scaffold0123 (1 HSPs)
scaffold0123 (357-421)||(44529-44593)
[»] scaffold0044 (1 HSPs)
scaffold0044 (300-364)||(53239-53303)
[»] scaffold0022 (1 HSPs)
scaffold0022 (294-394)||(90861-90961)
[»] scaffold0136 (1 HSPs)
scaffold0136 (294-364)||(3779-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (294-364)||(2987-3057)
[»] scaffold0036 (2 HSPs)
scaffold0036 (295-364)||(9678-9747)
scaffold0036 (353-394)||(9747-9788)
[»] scaffold0279 (1 HSPs)
scaffold0279 (338-449)||(17737-17844)
[»] scaffold0227 (1 HSPs)
scaffold0227 (294-338)||(15045-15089)
[»] scaffold0697 (1 HSPs)
scaffold0697 (323-373)||(1683-1733)
[»] scaffold0154 (1 HSPs)
scaffold0154 (294-364)||(13472-13542)
[»] scaffold0103 (1 HSPs)
scaffold0103 (338-439)||(51785-51888)
[»] scaffold0057 (1 HSPs)
scaffold0057 (294-364)||(24083-24154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (353-394)||(135312-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (295-364)||(263303-263372)


Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-125; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 4428990 - 4428704
Alignment:
Q  20 ctatgtacttgggagacatctgcattttcaaaaggcggccttatgctatcaatagaattggtaagac--------------tggatgacttgaatgcttg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||    
T  4428990 ctatgtacttgggagacatctgcattttcaaaaggcggccttatgctatcaatagaattggtaagacaattactgttggactggatgacttgaatgcttg 4428891  T
Q  106 gttagtggctgaaccacctgaatctgattttgaacctgttcttggtggtaacaaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatt 205  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428890 gttagtggctgaaccacctgaatctgattctgaacctcttcttggtggtaacaaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatt 4428791  T
Q  206 tatgagtttttaggttttgctagtggtgacagtgttttttggattaaggtgtttaggcttgatgagaaggcgcataaatgggtgaaa 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4428790 tatgagtttttaggttttgctagtggtgacagtgttttttggattaaggtgtttaggcttgatgagaaggcgcgtaaatgggtgaaa 4428704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 10577676 - 10577814
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||||||| ||||||||||| |||||| |||||||||||||    
T  10577776 taaaaaaattagctgtgtcggcgtgt-cggtgtccgtgtc 10577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 25934745 - 25934574
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccg-----------acacatataattacactgcatt 382  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||| |||    
T  25934745 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtatt 25934646  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcg-----tgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||| |||||||||||||||| |||     ||||||||||||||||||||||| |||||||||    
T  25934645 ttgtgattttctagaaaatttagctgtgtcggcgtgtcatgtccggtgtccgtgtccgtatccgtgcttcat 25934574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 289 - 449
Target Start/End: Original strand, 46348319 - 46348478
Alignment:
Q  289 gaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||| |||||||||||||||| ||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||| | ||||||||||  ||| | |||    
T  46348319 gaaactatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatga 46348418  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||| | |||   ||||||||||| |||||| | ||||||||||||||||| |||||||||    
T  46348419 ttttttcaaattattagctgtgtcggcgtgt-cagtgtccgtgtccgtatccgtgcttcat 46348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 41597411 - 41597549
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac-tgcattttgtgatttt 392  Q
    |||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| | |   |||| |  |||||||||||||    
T  41597411 tatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca-acaccaacacatatattttgtgatttt 41597509  T
Q  393 ctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||| |||||||||||||||  |||||| |||||||||||||    
T  41597510 ctagaaaatttagctgtgttggcgtgt-cggtgtccgtgtc 41597549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 293 - 400
Target Start/End: Complemental strand, 12919064 - 12918957
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| || ||| ||||||| |    
T  12919064 atatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgattgt 12918965  T
Q  393 ctaaaaaa 400  Q
    ||||||||    
T  12918964 ctaaaaaa 12918957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 30749958 - 30749852
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| |||||||||| | |||| |||| ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  30749958 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattttc 30749859  T
Q  394 taaaaaa 400  Q
    |||||||    
T  30749858 taaaaaa 30749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 30771409 - 30771303
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| |||||||||| | |||| |||| ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  30771409 tatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgattttc 30771310  T
Q  394 taaaaaa 400  Q
    |||||||    
T  30771309 taaaaaa 30771303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 37598949 - 37598852
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactg-aatttgtgatttt 37598852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 42359391 - 42359516
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||||  ||| |||||||||||||||| | ||||||||||| ||||||||||||| |    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T
Q  395 aaaaaatttagctgtgtcagcgtgtc 420  Q
     |||   |||| ||||||||||||||    
T  42359491 caaattattagatgtgtcagcgtgtc 42359516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 32461394 - 32461465
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32461394 tatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 51410143 - 51409983
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| | ||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||| | ||||||||||| ||| |||||||||     
T  51410143 tatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 51410044  T
Q  394 taaaaaat-ttagctgtgtcagcgtgtccg----gtgtccgtgtccgtatcagtgcttcat 449  Q
    |  ||| | |||| |||||| || ||||||    ||||||||||||||||| |||||||||    
T  51410043 ttcaaattattagatgtgtcggcatgtccgttttgtgtccgtgtccgtatccgtgcttcat 51409983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 1486646 - 1486776
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacactgcattttgtgat 389  Q
    ||||||||| ||||||||| |||| ||||||||||| ||||| |||||||||||||||     |||||||||||| ||||||||||||| ||| ||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  390 tttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    ||| | |||   |||||||||||||||||||    
T  1486746 tttttcaaattattagctgtgtcagcgtgtc 1486776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 18337447 - 18337349
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| |||| |||||| ||||| ||||||||| ||||||||||||||||| | ||||||||||| ||| |||||||||    
T  18337447 tatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 294 - 431
Target Start/End: Original strand, 22515828 - 22515964
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| || | |||||||||||||||||||||| | ||||||||||  ||| |||||||||     
T  22515828 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttt 22515927  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtg 431  Q
    | |||   ||||||||||| |||||||| |||||||||    
T  22515928 tcaaattattagctgtgtctgcgtgtcc-gtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 4428709 - 4428650
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4428709 gtgaaattgacgagtttgggggatagggttttgtttttggggaatggatgtttgttttct 4428650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 392
Target Start/End: Original strand, 5898211 - 5898305
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||| |||| || |||||||| ||||  ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 29163323 - 29163448
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||| ||||| ||  ||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||| | || ||| ||||||||||     
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcc 29163422  T
Q  395 aaaaaatttagctgtgtcagcgtgtc 420  Q
     |||  |||||| ||||| |||||||    
T  29163423 taaatttttagcggtgtcggcgtgtc 29163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 36878584 - 36878419
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtca-----gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| |||||||||||||||||      |||| || ||||||| ||||||||||| ||||||||||||| ||| |||||    
T  36878584 tatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtga 36878485  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtc-----cggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||| |||   ||||| ||||| |||||||     |  |||||||||||||||| |||||||||    
T  36878484 ttttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttcat 36878419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 47989632 - 47989556
Alignment:
Q  288 tgaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| |||||||||||||||||||| |||| |||||||||||  ||||||||| ||||||||||||||||||||||    
T  47989632 tgaaactatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 394
Target Start/End: Complemental strand, 40181976 - 40181889
Alignment:
Q  307 cactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||| |||| ||||||||||| ||||  ||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttct 40181889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 1815375 - 1815249
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||| ||||| |||||||  ||| ||||||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||| ||| |||||||||     
T  1815375 tatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttt 1815276  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||| | |||  |||||| |||||||    
T  1815275 taaaataattatttgtgtcggcgtgtc 1815249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 40258874 - 40258972
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| |||||||||| |||| ||||||||||  ||||| |||| |||||||||| ||||||||||| | ||||||||||| ||| |||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgatttt 40258972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 40917878 - 40917808
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||| |||| |||| ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  40917878 tatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 456 - 509
Target Start/End: Complemental strand, 4439932 - 4439879
Alignment:
Q  456 ttgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4439932 ttgatgagtttgggagatagggttttgtttttggggaatggatgttcgttttct 4439879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 52903364 - 52903269
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||| | | ||||| |||||||| ||||| |||||    |||||||||||||||||||||||||||||||| ||| | |||||||    
T  52903364 tatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacaca---cgtgtccgacaccgacacatataattacactgaattatatgatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 2896062 - 2896188
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||| || ||||||| ||||||| ||| ||||||| || || ||||| ||||||||| |||||||||| |||||  ||||||| ||| ||||||||||    
T  2896062 tatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttc 2896161  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   ||||| ||||| |||||||    
T  2896162 tcaaattattagcggtgtcggcgtgtc 2896188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 9828173 - 9828103
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||||||||||||| ||||| |||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 27965941 - 27966039
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||||| |||| | |||||| ||||| |  |||||||||||||||| ||||  ||||||||    
T  27965941 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacgg--acatataattacactgaatttaatgattttc 27966038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 39130711 - 39130812
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaa 396  Q
    |||||| |||||||| |||||| | |||||||||  ||||   ||||||| ||||||||||||||||||||||||||||||  ||| | | |||||||||    
T  39130711 gaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattatataattttctaa 39130810  T
Q  397 aa 398  Q
    ||    
T  39130811 aa 39130812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 31015155 - 31015091
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||| ||  |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  31015155 tatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac 31015091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 6427593 - 6427531
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 356  Q
    |||||||||||||||||| |  ||| ||||||||||| ||||| |||||||||||||||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 16297223 - 16297322
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc---gacacatataattacactgcattttgtgattt 391  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| |||||  |||||||||||||||   ||||  | ||||||||||| ||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattt 16297321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 38078602 - 38078720
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| | |||||| |||| ||||||||||  ||||   ||| |||||||||||||||||||||| | |||||||| || ||| |||||||||     
T  38078602 tatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttt 38078701  T
Q  394 taaaaaatttagctgtgtc 412  Q
    | |||   |||||||||||    
T  38078702 tcaaattattagctgtgtc 38078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 45534131 - 45534248
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||  |||||||| ||||||||||||||||  |||||||||| |||      | ||||||||| ||||| |||||||  ||| ||||||||||    
T  45534131 tatgaagcacaaacactcctcggataaggcgtgtccctatgtcagacacatgtaccacaccacaccgacatatatacttacactaaattatgtgattttc 45534230  T
Q  394 taaaaaatttagctgtgtc 412  Q
    | |||||||||||||||||    
T  45534231 t-aaaaatttagctgtgtc 45534248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 435
Target Start/End: Original strand, 6414932 - 6415082
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc----------gacaccgacacatataattacactgcattt 383  Q
    |||||||||||||||||||| |||| |   ||||| | ||||||||||||||||||||||          ||||||||||||| |||||| |||| |||     
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcgaatgacaccgacacatctaattaaactgtatta 6415031  T
Q  384 tgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccg 435  Q
    ||||||||||| ||| | |||||  |||| |||||| | |||||||||||||    
T  6415032 tgtgattttctcaaataattagcgatgtcggcgtgt-cagtgtccgtgtccg 6415082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 7918155 - 7918252
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-cgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| ||| ||||||  |||||||| ||||    || | |||||| ||||||||||||||||||| ||| |||||||||    
T  7918155 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacgt----tgacacgacactgacacatataattacactgaattatgtgatttt 7918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 34712324 - 34712424
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||||| || || |||||||| ||||  ||||||||||     |||||| ||||||||||||||||||  ||| ||| ||||||    
T  34712324 tatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaattatgttattttc 34712423  T
Q  394 t 394  Q
    |    
T  34712424 t 34712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 1864874 - 1864921
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattttct 1864921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 4440071 - 4440004
Alignment:
Q  157 caaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatttatgagtttttaggttttg 224  Q
    |||||||||||||||||||||||||||   |||| ||| ||||| ||| ||||||| |||||||||||    
T  4440071 caaaaaattcttagtggagagtgagggtgcgttgctgcgagtggacatctatgagtgtttaggttttg 4440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 36906125 - 36906055
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    |||||||||||||||||| ||| || ||| ||||||| ||||||||| || |||||||||||||| ||||||    
T  36906125 tatgaagcacggacactc-ttgcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacaca 36906055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 9629834 - 9629900
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||| ||||||  || |||||||| ||||| |||| ||||||||||||||| ||||||    
T  9629834 aagcacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacac 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 9690214 - 9690313
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||  ||||||   |||| ||||||||||| ||||| |||||||||| ||| ||||| ||||||||||| ||||||||| |  ||||||||||    
T  9690214 tatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacactgaa--ttgtgatttt 9690311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 13997957 - 13997903
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||| ||||||| ||| |||||||||||||||||||||||| ||| |||||||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttt 13997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 18190061 - 18190147
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||| |||| ||| ||||||| ||||| ||||||||| ||||| |||| |||||| | ||||||||||| ||| ||| |||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaatttt 18190147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 18556386 - 18556452
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccg 360  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| || |||||||| ||| |||||||    
T  18556386 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccg 18556452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21032335 - 21032265
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||| |||||||||||||| |||||| || |  |||| ||||| |||||||||||||||| ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacac 21032265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 398
Target Start/End: Original strand, 39953141 - 39953191
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaa 398  Q
    |||||||||||||||||||| |||||||||  ||| |||||||||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaa 39953191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 48415664 - 48415702
Alignment:
Q  291 aaatatgaagcacggacactccttggataaggcgtgtcc 329  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  48415664 aaatatgaagcacggacactccttggattaggcgtgtcc 48415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 14332634 - 14332683
Alignment:
Q  345 gtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||| |||||||||||||||  ||| |||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttct 14332683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 18991260 - 18991223
Alignment:
Q  472 atagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18991260 atagggttttgttcttggggaatggatgttcgttttct 18991223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 34371772 - 34371731
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 44482289 - 44482248
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 11412709 - 11412809
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtg-tcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||||| ||||||||| |||||  ||||| ||||| || | |||||| |||||||||| ||| || ||| || ||| ||| ||||||    
T  11412709 atgaagcacggacactcctaggataaggcatgtcctagtgtcggacacatgttggtgtccaacaccgacacctatgatcacattgaattatgtcattttc 11412808  T
Q  394 t 394  Q
    |    
T  11412809 t 11412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 13436523 - 13436479
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 15765876 - 15765828
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    |||||||||||||||||| | |||| ||||||||||| |||||||||||    
T  15765876 tatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 6612112 - 6612171
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||| ||||||||||  ||||| ||||| | |||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacac 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 9709885 - 9709838
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||||||  | ||| |||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttct 9709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Original strand, 17705576 - 17705626
Alignment:
Q  342 cgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||    
T  17705576 cgtgtcgcgtccgacac-gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 34315767 - 34315712
Alignment:
Q  357 accgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtc 412  Q
    |||||||||||||||||||| | ||| |||  |||| |||||||||||||||||||    
T  34315767 accgacacatataattacaccgaattatgtagttttttaaaaaatttagctgtgtc 34315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 34741964 - 34741894
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacg-tgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||| | |||| |||||||| |||||||| |||||| ||||||||| |||||| ||||    
T  34741964 tatgaagcacggacactcttcggattaggcgtgt-cccgtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 43492456 - 43492535
Alignment:
Q  315 ggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||| |||||||| || ||||| |||| |||| ||||| |||||||||||| |||||||||| | |||  ||||||||||    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttct 43492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 1704936 - 1704986
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 344  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| |||||||    
T  1704936 tatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgt 1704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 5944412 - 5944342
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| |||||||| |||| |||||| |||| ||||| |||| |||| ||||||| || ||||||    
T  5944412 tatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 6574095 - 6574053
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 336  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  6574095 tatgaagcacggtcactccttggattaggcgtgtcccagtgtc 6574053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 8842666 - 8842736
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    ||||||| ||| || ||||||||||   |||| || ||||||||||||||||||| | |||||||||||||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattaca 8842736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 10577814 - 10577848
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  10577814 cgtgtccggtgtccgtgtccgtatccgtgcttcat 10577848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 12443456 - 12443529
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    ||||||||||| | |||||| |||||||||| ||| ||||||||||| |||   ||||||||||| |||||||||    
T  12443456 gtgtccgacac-gtcacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccg 12443529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 21530778 - 21530728
Alignment:
Q  323 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 373  Q
    |||||||  ||||| |||| |||||||||||||||||||||| ||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 21530728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 392
Target Start/End: Complemental strand, 26830701 - 26830608
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||  ||| ||||||||||| || ||  |||||||| ||||| |||| |||||| |||||||||| |  ||| |||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 31694640 - 31694710
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||| |||||||| || |||||  | | |||| |||||||||||||||||    
T  31694640 tatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 38078735 - 38078769
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  38078735 cgtgtccggtgtccgtgtccgtatccgtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 20157350 - 20157391
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 22881606 - 22881655
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22881655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 422
Target Start/End: Original strand, 24577186 - 24577255
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    |||||||||||| | ||||||||||| ||| ||||||||| | |||   |||| ||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccg 24577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 25361945 - 25361904
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 449
Target Start/End: Original strand, 48548042 - 48548075
Alignment:
Q  416 gtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||||||||||||||| |||||||||    
T  48548042 gtgtccggtgtccgtgtccgtatccgtgcttcat 48548075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 10572535 - 10572575
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtg 334  Q
    |||||||||||||||||||||| || |||||||||| ||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtg 10572575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 32900009 - 32899937
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg-tgtccgacaccgacaca 365  Q
    ||||||||| ||||| |||| |||| ||| ||||||| ||||| |||| | |||| |||||||||||||||||    
T  32900009 tatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgacatgcgtcggtgtccgacaccgacaca 32899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 35702543 - 35702579
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccc 330  Q
    |||||||||||||||||||| |||| |||||||||||    
T  35702543 tatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 5e-54; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 294 - 449
Target Start/End: Original strand, 13845466 - 13845612
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13845466 tatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgattttc 13845565  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||| ||||||         ||||||||||||||||||| |||||||||    
T  13845566 taaaaaatttaactgtgt---------cggtgtccgtgtccgtatccgtgcttcat 13845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 35223056 - 35222930
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||    
T  35223056 tatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttc 35222957  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||||  |||| |||||| |||||||    
T  35222956 taaaaatgttagttgtgtcggcgtgtc 35222930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 2941658 - 2941575
Alignment:
Q  312 cttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttcta 395  Q
    |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2941658 cttggataaggcatatccccatgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgattttcta 2941575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 40993276 - 40993374
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  40993276 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 14028066 - 14027961
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcag---------cgtgtccggtgtccgtgtccgtatcagtg 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |         ||||||||||||||||||||||||| |||    
T  14028066 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtg 14027967  T
Q  444 cttcat 449  Q
    ||||||    
T  14027966 cttcat 14027961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 20503583 - 20503430
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||| |||||||||| | ||||||||||| ||| ||| |||||     
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttt 20503484  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   || | |||||| |||||| | |||| |||||||||||| |||||||||    
T  20503483 tcaaattatttgttgtgtcggcgtgt-cagtgt-cgtgtccgtatccgtgcttcat 20503430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 55401193 - 55401095
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 28918120 - 28918021
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc--cgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||||||  |||||||||||| | ||||||||||| ||| |||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 8789489 - 8789591
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt--cgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| |||| ||||  |||||||||||||||||||||||||||||| | ||| ||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  392 tct 394  Q
    |||    
T  8789589 tct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 10955073 - 10954972
Alignment:
Q  294 tatgaagcacggacact---ccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatt 390  Q
    |||||||||||||||||   ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||| | | ||||||||| ||| |||||||    
T  10955073 tatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgatt 10954974  T
Q  391 tt 392  Q
    ||    
T  10954973 tt 10954972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 15864952 - 15864868
Alignment:
Q  292 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacact 377  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||||    
T  15864952 aatatgaagcacggacactctttggattaggcgtgt-cccgtgtcagacacgtgtcggtgtccgaca-cgacacctatgattacact 15864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 18427067 - 18426969
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||| |||||||||||||  ||| ||| ||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| | ||| |||||||||    
T  18427067 tatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 422
Target Start/End: Complemental strand, 27505369 - 27505236
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| |||| |||||| ||||| |||||||||||||||     |||||||||||| | ||||||||||  ||| |||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtga 27505270  T
Q  389 ttttctaaaaaat-ttagctgtgtcagcgtgtccg 422  Q
    |||| |||||| | ||||||||||| || ||||||    
T  27505269 tttt-taaaaattattagctgtgtcggcttgtccg 27505236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 41961580 - 41961650
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 4987222 - 4987291
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||| |||||||||||| |||| ||||||||||| ||||| |||||||||||||||| ||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  300 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||| |||  ||||||||||  ||||| |||| |||||||||||||||| | ||||||||||||||||| ||| |||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 9494846 - 9494905
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9494846 gtgaatttgatgagtttaggggatagggttttgttcttggggaatggatgttcgttttct 9494905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 7171607 - 7171537
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 376  Q
    ||||||||||||| ||||||||| | ||||| |||||||||||||||||||||| |||| | |||||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacac 7171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 15999950 - 16000008
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 351  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  15999950 atatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 25065036 - 25064966
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||| |||||| |||||||| ||||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  25065036 tatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 25093582 - 25093520
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttct 25093520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 11252094 - 11251996
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||||| |||| |||||||| ||  || | ||||||||| ||||| |||||||||||  |||||||||||| ||| ||||||||||    
T  11252094 tatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacac--ataattacactgaattatgtgattttc 11251997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 24633341 - 24633498
Alignment:
Q  292 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||| ||||| | | || |||||||| || |||| ||||| ||||||||||| ||||||||||||||||||||| || |||  |||||||    
T  24633341 aatatgaagcacgggcactc-tcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgattt 24633439  T
Q  392 tctaaaaaatttagctgtgtcagcgtgtcc----ggtgtccgtgtccgtatcagtgctt 446  Q
    |   |||   ||| ||||||||| ||||||     ||||||||||||||||| ||||||    
T  24633440 ttccaaattattaactgtgtcagagtgtccatgtcgtgtccgtgtccgtatccgtgctt 24633498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 4466541 - 4466641
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| | ||||| |||||||| ||||| ||||| | | || |||||||||| ||||||||  ||||||| ||| | ||||||||    
T  4466541 tatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattatatgattttc 4466640  T
Q  394 t 394  Q
    |    
T  4466641 t 4466641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 24204983 - 24205082
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||||| | || ||||||||||  ||||| |||||| ||| |||||||||| |||||| ||||||||||||| ||| ||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgtcattttc 24205081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 25775624 - 25775531
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatt 390  Q
    |||||||||| |||||||| |||| ||||||||||  ||||| ||||||   |||||||||||||||||| | ||||||||||| ||| |||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacga--cgtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 29508567 - 29508464
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac------cgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||| ||||||| || |||||||| ||||| |||  ||||||||||||||||      |||||||||||||||||||| ||| | |||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  389 tttt 392  Q
    ||||    
T  29508467 tttt 29508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 8842447 - 8842348
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||||||||| |  | ||  ||| |||||||||| |||||||||| ||||||||||||   ||| ||||||||||    
T  8842447 tatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc 8842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 26492146 - 26492284
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||| |||||| |||| |||| || ||||||   |||||||||| ||||||||||||||||||| || | ||||||||||| ||| | |||||||     
T  26492146 tatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttt 26492245  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    | |||   |||||| |||| |||||| | |||||||||||    
T  26492246 tcaaattattagctctgtcggcgtgt-cagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 34185053 - 34185116
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||| |||| |||||||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 507
Target Start/End: Complemental strand, 41980926 - 41980875
Alignment:
Q  456 ttgacgagtttgggggatagggttttgtttttggggaatggatgttcgtttt 507  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  41980926 ttgacgagtttaggggatagagttttgttcttggggaatggatgttcgtttt 41980875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 14209242 - 14209172
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||| ||||||| ||| || ||||  ||||  ||||||||||||||||||||||||||    
T  14209242 tatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 7928515 - 7928470
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgatttt 7928470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 41985696 - 41985647
Alignment:
Q  460 cgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  41985696 cgagtttaggggatagagttttgttcttggggaatggatgttcgttttct 41985647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 9344057 - 9344001
Alignment:
Q  156 acaaaaaattcttagtggagagtgagggcaagttgttgctagtggtcatttatgagt 212  Q
    |||||||||||||||| ||||| |||||  ||||||||||||||| |||||||||||    
T  9344057 acaaaaaattcttagtcgagagagagggagagttgttgctagtggacatttatgagt 9344001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 13414533 - 13414469
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtc 412  Q
    |||||||||||||||||||||||||||| || ||| | ||||||||||||| |||| | ||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgattttctaaaacatttggttgtgtc 13414469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||  ||||||||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||| || |||| ||| ||||||| |||||  ||||||||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 37077490 - 37077418
Alignment:
Q  292 aatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt-cgtgtccgacaccgaca 363  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||| |||| | || ||||| |||||||||||    
T  37077490 aatatgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgaca 37077418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 51206294 - 51206414
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||||||||||| ||  || |||| ||||| ||| ||    ||||||||||||||||| | || |||||||| ||| |||||||||     
T  51206294 tatgaagcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgtgattttt 51206393  T
Q  394 taaaaaatttagctgtgtcag 414  Q
    | |||   |||||||||||||    
T  51206394 tcaaattattagctgtgtcag 51206414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 15796224 - 15796294
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| |||||| |||||| |||||||| || ||||  ||||||||| |||||||||||| ||||    
T  15796224 tatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacac 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 45451633 - 45451571
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||| |||||||||||||||||||||||||| |||| |||| | | |||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttct 45451571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 49505148 - 49505245
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgct 445  Q
    |||||||||||| ||||||||||||||||||  ||| ||||||||||| |||   ||||| || || |||||| |||||||||| ||| |||| |||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgt-cggtgtccgtttccatatccgtgct 49505245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 8383322 - 8383249
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||||||||||||||| ||||||||||||| ||| | ||||||||| |||   ||||| ||||| |||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtc 8383249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 6780404 - 6780444
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactg 6780444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 509
Target Start/End: Complemental strand, 9336611 - 9336559
Alignment:
Q  457 tgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    |||||| ||| || |||| ||||||||| ||||||||||||||||||||||||    
T  9336611 tgacgaatttaggagataaggttttgttcttggggaatggatgttcgttttct 9336559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 10690193 - 10690257
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||  ||| |||| |||| ||| ||||| ||||||||||||||||| |||||||||||    
T  10690193 tatgaagcacatacattcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacac 10690257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 11666070 - 11665964
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----------cgacaccgacacatataattacactgcattttg 385  Q
    ||||||||||||||||||| || |||||||| ||  | ||||||||||||||||||           |||||||||||||||||||||||||  ||| ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  386 tgatttt 392  Q
    |||||||    
T  11665970 tgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 14832202 - 14832158
Alignment:
Q  320 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  14832202 aggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 20389694 - 20389636
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||| ||| |||||||||    
T  20389694 gtgtcagacacgtgt-gtgtccgacaccgacgcatat-attacactgaattatgtgatttt 20389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 394
Target Start/End: Original strand, 32804484 - 32804581
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||  ||| |||||| |  | ||| | |||| |||||||||||||    ||||||||||||||||||  ||| |||||||||    
T  32804484 atatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgatttt 32804579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 9407444 - 9407385
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||| |||| |||||| ||||||||||||||||| || | |||||||||||| ||||||    
T  9407444 gtgaagttgatgagtttaggggatagggttttgttctttgtgaatggatgttcattttct 9407385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 9655395 - 9655454
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||| |||| || ||| |||||||||||||||||||||||  | |||||||||||||||    
T  9655395 gtgaagttgatgaatttaggggatagggttttgtttttgggcgaaggatgttcgttttct 9655454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 55213091 - 55213020
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    |||| |||||||| ||| ||||||| | ||||||| | ||||| ||||||||| ||| ||||||||||||||    
T  55213091 tatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacaca 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 750698 - 750732
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  750698 cgtgtccggtgtccgtgtccgtatccgtgcttcat 750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 4990913 - 4990955
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 336  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  4990913 tatgaagcacggacactcctcggattaggcgtgtccacgtgtc 4990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 11507469 - 11507515
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| ||||| |||||||||||||||| ||| ||||||||||    
T  11507469 cgtgtccgataccgaaacatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 398
Target Start/End: Complemental strand, 38731278 - 38731232
Alignment:
Q  352 ccgacaccgacacatataattacactgcattttgtgattttctaaaa 398  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| |||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaa 38731232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 40052430 - 40052380
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 344  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |||||||    
T  40052430 tatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 7614396 - 7614456
Alignment:
Q  333 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||| |||| ||||| ||||||||||| ||||||||| |||| ||| |||||||||||    
T  7614396 tgtcagac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttct 7614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 9343905 - 9343864
Alignment:
Q  468 ggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    |||||||| |||||||| |||||||||| |||||||||||||    
T  9343905 ggggatagtgttttgttcttggggaatgaatgttcgttttct 9343864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 9352961 - 9352920
Alignment:
Q  468 ggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    |||| ||||||||||||| |||||| ||||||||||||||||    
T  9352961 gggggtagggttttgtttgtggggagtggatgttcgttttct 9352920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 449
Target Start/End: Original strand, 17568750 - 17568783
Alignment:
Q  416 gtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||||||||||||||| |||||||||    
T  17568750 gtgtccggtgtccgtgtccgtatccgtgcttcat 17568783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    ||||||||||||||||||||||||| |||| |||||  ||||| |||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 25074913 - 25074841
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtg-tcgtgtccgacaccgacaca 365  Q
    ||||||||||| |||||||| |||| ||| ||||||| ||||| |||||| | | ||||| ||||||||||||    
T  25074913 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacaca 25074841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 420
Target Start/End: Complemental strand, 26508166 - 26508102
Alignment:
Q  356 caccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||||||| | ||||||||||| ||| ||||||||| | |||   |||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtc 26508102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 27903756 - 27903684
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacaca 365  Q
    ||||||||||||||||| || |||| |||| ||  || |||||||||||| ||| || |||||||||||||||    
T  27903756 tatgaagcacggacacttctcggattaggcatgatccagtgtcagacacgcgtcggtatccgacaccgacaca 27903684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 34910436 - 34910392
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtca 337  Q
    ||||||||||||||||||||| |||| || |||||||| ||||||    
T  34910436 atatgaagcacggacactcctcggattagacgtgtcccggtgtca 34910392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 49651717 - 49651777
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg 354  Q
    ||||||||||||||||| || |||| ||| ||||||| ||||| || | ||||||||||||    
T  49651717 tatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 24009413 - 24009274
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  24009413 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata-atttacactgcattttgtgattttc 24009315  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgt 436  Q
    ||||||| |||||||||||  ||||||  |||||||| |||||    
T  24009314 taaaaaaattagctgtgtcgccgtgtc--gtgtccgtatccgt 24009274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 20242668 - 20242794
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  20242668 tatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttc 20242767  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||||| |||| |||||| |||||||    
T  20242768 taaaaaaattagttgtgtcggcgtgtc 20242794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 294 - 422
Target Start/End: Original strand, 36096305 - 36096444
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac-----------accgacacatataattacactgcatt 382  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||    
T  36096305 tatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcatt 36096404  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  36096405 ttgtgattttctaaaaaatttagctgtgtcggcgtgtccg 36096444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 2438661 - 2438783
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| |||| |||||||||||||||||||||| | ||||||||||| ||| ||||||||| |    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T
Q  395 aaaaaatttagctgtgtcagcgt 417  Q
     |||   ||||||||||||||||    
T  2438761 gaaattattagctgtgtcagcgt 2438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 41843564 - 41843405
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg-----acaccgacacatataattacactgcattttgtga 388  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||| |||||     ||||||||||||||||||| || | ||| |||||    
T  41843564 tatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtga 41843465  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||| ||||||||||||| | |||| |||||| | |||||||||| | |||| |||||||||    
T  41843464 tttcctaaaaaatttagttttgtcggcgtgt-cagtgtccgtgttcatatccgtgcttcat 41843405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 37559095 - 37558941
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| | |||||| || ||||| ||||||||||  ||||||||||||||| | |||||||| || ||| |||||||||     
T  37559095 tatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt- 37558997  T
Q  394 taaaaaat-ttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    || ||| | ||||||||||| |||||| | ||||||||||||||||| |||||||||    
T  37558996 tacaaattattagctgtgtcggcgtgt-cagtgtccgtgtccgtatccgtgcttcat 37558941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 28596587 - 28596503
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    |||||||||||||||||||| |||| ||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactg 28596503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 34784912 - 34785061
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----------cgacaccgacacatataattacactgcatt 382  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||| ||||||||||           |||||||||||||||||||||||||  |||    
T  34784912 tatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaatt 34785011  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
     ||||||||||||||||| |||| |||||| | |||| | |||||||||||    
T  34785012 atgtgattttctaaaaaaattagttgtgtcggtgtgt-cagtgtccgtgtc 34785061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 449
Target Start/End: Original strand, 38117100 - 38117260
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||| |||||||||||| |||| | ||||||||| | | | |||||||||     
T  38117100 tatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttt 38117199  T
Q  394 taaaaaatttagctgtgtcagcgtgtccg----gtgtcc-gtgtccgtatcagtgcttcat 449  Q
    | |||   ||||||||||| ||||||| |    |||||| ||||||||||| |||||||||    
T  38117200 tcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgtgcttcat 38117260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 18840954 - 18841080
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||| |||||||||| ||||||||||| | ||||||||||  ||| ||| |||||     
T  18840954 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttt 18841053  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   |||| ||||||||||||||    
T  18841054 tcaaattattagttgtgtcagcgtgtc 18841080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 456 - 509
Target Start/End: Original strand, 20694345 - 20694398
Alignment:
Q  456 ttgacgagtttgggggatagggttttgtttttggggaatggatgttcgttttct 509  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20694345 ttgacaagtttgggggatagggttttgtttttggggaatggatgttcgttttct 20694398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 26769640 - 26769571
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||| |||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 375
Target Start/End: Original strand, 34993923 - 34994004
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    ||||||||||| |||||||||| || ||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||||    
T  34993923 tatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattaca 34994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 5040845 - 5040754
Alignment:
Q  301 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||  ||||||||||| | ||| ||||| ||||||||||||||||||||| | |||||||| || ||| |||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 5040754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 391
Target Start/End: Complemental strand, 5367292 - 5367213
Alignment:
Q  312 cttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    ||||||| ||||||||||| | ||| || | |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 392
Target Start/End: Complemental strand, 12224329 - 12224243
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||| | |||||||| || ||| || ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggatttt 12224243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 15972991 - 15972893
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||| || | |||| ||| ||||||| | ||| ||||||||||||||||||||||||||| | ||||||||||| ||| ||| |||||    
T  15972991 tatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaatttt 15972893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 30717460 - 30717530
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||||||| |||||| |||| |||||  ||||||||||||||||||| ||||||    
T  30717460 tatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 35056997 - 35056927
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  35056997 tatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 37419872 - 37419802
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||  |||||||||||||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 37411188 - 37411285
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||| | ||||||| |||  ||||||||||| ||||| |||||| ||||||| ||||| ||||||||||||| |||||| ||| |||||||||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttct 37411285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 349
Target Start/End: Original strand, 18054717 - 18054772
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgt 349  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  18054717 tatgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgtcgt 18054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 11223794 - 11223858
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 359  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||||| |||||||||||||||||    
T  11223794 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 433
Target Start/End: Original strand, 18054803 - 18054883
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct-aaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||||||  ||||| |||||||| ||||    
T  18054803 cgacaccaacacatataattacactgcagtttgtgattttctaaaaaaaattagctgtgtcgacgtgt-cggtgtccctgtc 18054883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 42511323 - 42511387
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||||||| |||||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 32749755 - 32749825
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||| |||||||||||| ||||||||||||||| ||||| ||||| ||||  |||||||| ||||||    
T  32749755 tatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacac 32749825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 20922922 - 20922975
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaa 400  Q
    |||||||||||| ||||||||||||||||||  ||| |||||||||||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgattttctaaaaaa 20922975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 420
Target Start/End: Complemental strand, 21624374 - 21624258
Alignment:
Q  300 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaa 399  Q
    ||||||||||||||||||| ||| |||||||  |||| ||||     |||||||||||||||||| | ||||||||||| ||| ||  ||||| | ||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggaca-----cgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaa 21624280  T
Q  400 at-ttagctgtgtcagcgtgtc 420  Q
     | ||||||||||| |||||||    
T  21624279 ttattagctgtgtcggcgtgtc 21624258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 27084387 - 27084318
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||||  |||||||||  ||| ||||||||| | ||||  ||||||||||||||||||||||||||    
T  27084387 tatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 34006931 - 34007016
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgt-cgtgtccgacaccgacacatataattacactg 378  Q
    |||||||||||||||||||||| || ||| |||| || ||||||||||||  |  |||||| |||||||||| ||| |||||||||    
T  34006931 tatgaagcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactg 34007016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 34691799 - 34691844
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 34714211 - 34714256
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 18255944 - 18255980
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtcc 329  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18255944 atatgaagcacggacactccttggattaggcgtgtcc 18255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 21616813 - 21616742
Alignment:
Q  361 acacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||||||||||||| ||| ||||||||||| |||   ||||| ||||| |||||||| |||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcc-gtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 23354581 - 23354652
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 364  Q
    ||||||| ||||||||||||| |||| |||||||| ||||||||||||||  ||| ||||||||| |||||||    
T  23354581 atatgaaccacggacactcctcggattaggcgtgt-cccgtgtcagacaccggtcggtgtccgaccccgacac 23354652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 30404829 - 30404889
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||| |||| |||||||||||||| ||||||| | ||||||||||| ||| |||||||||    
T  30404829 gtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 43585971 - 43586063
Alignment:
Q  319 aaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgt 411  Q
    |||| ||||||  ||||| ||||||| ||||||||||||||||||| | | |||||| || ||| ||| ||||||| |||| |||| ||||||    
T  43585971 aaggtgtgtccatgtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgt 43586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 420
Target Start/End: Original strand, 15909632 - 15909699
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||| | ||||||||||||||||| ||| ||| ||||||| |||| ||||||||| || |||||||    
T  15909632 cgacactgtcacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtc 15909699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 22084757 - 22084830
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtg---tcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||| ||||||| | |||| ||||||||||| |||   |||||||||||| ||||||||||| |||||    
T  22084757 tatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Complemental strand, 31808176 - 31808097
Alignment:
Q  313 ttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||| ||| ||||||  |||||  ||| ||||||||| | |||| ||||||||||||||||||| ||| |||||||||    
T  31808176 ttggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 11223864 - 11223930
Alignment:
Q  354 gacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||||||||| | ||||||||||| ||| ||| ||||| | ||||  |||||||||||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtc 11223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 15657992 - 15657930
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    |||||||| |||||||||| |||  ||||||||||| | ||| ||||||||||| ||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgaca 15657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 21374773 - 21374807
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  21374773 cgtgtccggtgtccgtgtccgtatccgtgcttcat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 23354926 - 23354995
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 364  Q
    |||||||| |||||||||| |||| |||||||| ||||||||||||||| ||| |||||| || |||||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgt-cccgtgtcagacacgggtcggtgtccaaccccgacac 23354995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Complemental strand, 26769497 - 26769463
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  26769497 cgtgtccggtgtccgtgtccgtatccgtgcttcat 26769463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 29176446 - 29176528
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    ||||| ||||||| ||| ||||| | ||||| |||| ||| ||||||| ||||| |||| ||||||||||||| ||| |||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtga 29176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 44860449 - 44860379
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| | || ||| |||||||  |||| ||||| |||||||||| ||||| ||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacac 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Original strand, 19536391 - 19536436
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 19536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 419
Target Start/End: Complemental strand, 31284118 - 31284041
Alignment:
Q  343 gtgtcgtgtccgacaccgacacat-ataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgt 419  Q
    ||||||||||| |||||||||||| ||||||||| || ||| ||||||||||| |||   ||||| ||||| ||||||    
T  31284118 gtgtcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 44860379 - 44860338
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| || ||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttct 44860338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 433
Target Start/End: Complemental strand, 6940370 - 6940235
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaa 396  Q
    |||||||||||| || || ||| ||| |||||   ||||  ||||||||||||||| || |||||||| | ||||||||||  ||| ||| | ||| |||    
T  6940370 gaagcacggacaatcatttgattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaa 6940271  T
Q  397 aaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||   ||||||||||| |||||| | |||||||||||    
T  6940270 aattattagctgtgtcggcgtgt-cagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 10535686 - 10535734
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    ||||||||||| |||||||| |||| ||||||||||  |||||||||||    
T  10535686 tatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 14996171 - 14996222
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    ||||||||| |||| |||||||| || ||||||||||||||| ||||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgaca 14996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 18889592 - 18889632
Alignment:
Q  354 gacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||| ||||||||| ||| |||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 27447082 - 27447114
Alignment:
Q  417 tgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||| |||||||||    
T  27447082 tgtccggtgtccgtgtccgtatccgtgcttcat 27447114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 419
Target Start/End: Complemental strand, 28524479 - 28524419
Alignment:
Q  359 cgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgt 419  Q
    |||||||||||||||||||| ||| |||||||| |  |||| ||||||||| || ||||||    
T  28524479 cgacacatataattacactgaattatgtgatttgcacaaaattttagctgtatcggcgtgt 28524419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Complemental strand, 31284026 - 31283994
Alignment:
Q  417 tgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||| |||||||||    
T  31284026 tgtccggtgtccgtgtccgtatctgtgcttcat 31283994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 38355888 - 38355928
Alignment:
Q  354 gacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||| |||||| ||| |||||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 40361738 - 40361778
Alignment:
Q  337 agacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  40361738 agacacgtgtcgtgtctgacaccaacagatataattacact 40361778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 8e-50; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 43737752 - 43737892
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T
Q  394 taaaaaatttagctgtgtcagcgtgt-ccggtgtccgtgtc 433  Q
     | |||||||||||||| | ||||||  |||||||||||||    
T  43737852 aagaaaatttagctgtgccggcgtgtgtcggtgtccgtgtc 43737892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 3951477 - 3951596
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga-tttt 392  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  3951477 tatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgattttt 3951576  T
Q  393 ctaaaaaatttagctgtgtc 412  Q
     | |||||||||||||||||    
T  3951577 tttaaaaatttagctgtgtc 3951596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 34450962 - 34451116
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc----------------cgacaccgacacatataattacact 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||    
T  34450962 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacacgacaccgacacatataattacact 34451061  T
Q  378 gcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||||||||||| |||||| ||||||||||||| |||| ||||| |||||||    
T  34451062 gcattttgtgattttcaaaaaaaattagctgtgtcagtgtgt-cggtgcccgtgtc 34451116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 3025668 - 3025569
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||| |||| || |||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 449
Target Start/End: Original strand, 36450695 - 36450849
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||||| |||| ||||||||||  ||||| |||||| ||||||||||||||| |||| | ||||||||||| ||| |||||||||     
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttt 36450794  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   |||| |||||| |||||| | ||||||||||||||||| |||||||||    
T  36450795 tcaaattattagttgtgtcggcgtgt-cagtgtccgtgtccgtatccgtgcttcat 36450849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 33405325 - 33405425
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||| ||||||||||||| |||||| || |||||||  |||||||||| |||||||||||||||||||||||||||||||||||  ||| |||| |||||    
T  33405325 tatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttc 33405424  T
Q  394 t 394  Q
    |    
T  33405425 t 33405425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 926730 - 926813
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    ||||||||||||||||||| |||||| || |||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactg 926813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 26902105 - 26902217
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----------cgacaccgacacatataattacactgcatt 382  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||           |||||||||||||||||||||||||| |||    
T  26902105 tatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaatt 26902204  T
Q  383 ttgtgattttcta 395  Q
     ||||||||||||    
T  26902205 atgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 14134817 - 14134663
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||| ||||||||||||| | || ||||||||||  ||| | ||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||||    
T  14134817 tatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttc 14134718  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   ||||   ||||  ||||||| ||||| ||||||||||| |||||||||    
T  14134717 tcaaattattagtattgtcgacgtgtcc-gtgtcggtgtccgtatccgtgcttcat 14134663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 20679337 - 20679436
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||| |||||||||| || ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||||||||||| | | |||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 449
Target Start/End: Original strand, 31109463 - 31109613
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaa 397  Q
    |||||||||||||||| |||| ||||||||||| |||||| |||||   | |||||||||| |||||||||| ||| |||| ||| | ||||||||| ||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaattgtttgattttctcaa 31109562  T
Q  398 aaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |   ||| | ||||| |||||| | |||||||||||| ||||||||||||||    
T  31109563 attattaacggtgtcggcgtgt-cagtgtccgtgtccatatcagtgcttcat 31109613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 40332307 - 40332209
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||| ||||||||||||| |||| ||||| ||||| ||||  |||||||||||||||| |||||||||| | ||||||||||| ||| |||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttct 40332209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||||||||||||||| |||| ||||||||||  ||||||||||| ||||||||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 5813707 - 5813569
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaa 396  Q
    |||||||||||||||||   || ||||||||||| ||||| ||||||||||||||||||||||||||| | || |||||||  | | ||||| ||| | |    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttca 5813608  T
Q  397 aaaatttagctgtgtcagcgtgtccggtgtccgtgtccgt 436  Q
    ||   ||||||||||| |||||||| |||||||| |||||    
T  5813607 aattattagctgtgtcggcgtgtcc-gtgtccgtatccgt 5813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 22652105 - 22652035
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||| |||||||||||||||||||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 29510234 - 29510304
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||||| ||||||||||||||||||||    
T  29510234 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 4786279 - 4786379
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||| ||| ||||| | |||| |  | ||  |||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  4786279 tatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttc 4786378  T
Q  394 t 394  Q
    |    
T  4786379 t 4786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 37283756 - 37283851
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||| ||||||| |||| || |||||||| ||   ||||||||||||||||| ||||||||||  |||||||||||| ||| ||||||||||    
T  37283756 tatgaagcacgggcactcctcggattagacgtgtcccggt---agacacgtgtcgtgtcccacaccgacac--ataattacactgaattatgtgattttc 37283850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  301 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    ||||||||||||| |||| || |||||||| || |  ||||||||||||||||||||| ||||||||||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 18407837 - 18407739
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||||||   || ||||||||||  ||||| |||| |||||||||||| || |||||| | ||||||||||| ||| |||||||||    
T  18407837 tatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 31557114 - 31557016
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||| ||| |||||| |||||||| ||||||||||  ||||| |||| |||||||||| |||||||| || | ||||||||||| ||| |||||||||    
T  31557114 tatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt 31557016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 405
Target Start/End: Complemental strand, 18964308 - 18964184
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt------ccg-------acaccgacacatataattacactgca 380  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||| |||||||||      |||       ||||||||||||||||||||| || |    
T  18964308 tatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattgaa 18964209  T
Q  381 ttttgtgattttctaaaaaatttag 405  Q
    || ||||||||||||||||| ||||    
T  18964208 ttatgtgattttctaaaaaaattag 18964184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 13844591 - 13844665
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||| |||   ||||| ||||| |||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccg 13844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 15816059 - 15816129
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| ||  |||||||||||||||||| ||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 8343445 - 8343381
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||| ||||||| | |||| ||||||||||| ||||| ||||||||||||||| |||||    
T  8343445 tatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 16641910 - 16641974
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||| ||||||||| |||| ||| ||||||| |||| |||||| |||||||||||||||    
T  16641910 tatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 24205748 - 24205820
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    ||||||| ||||||||||||| |||| |||||||| || |||||||||| | || |||| |||||||||||||    
T  24205748 atatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacaca 24205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 422
Target Start/End: Original strand, 31236570 - 31236646
Alignment:
Q  346 tcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||| |||   ||||| ||||| |||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccg 31236646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 6065587 - 6065650
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    |||||||||||||||||||||| || | |||||| || ||||| |||| |||||||||||||||    
T  6065587 tatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21465541 - 21465471
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||   || |||||| |||| ||||  ||||||||||||||||||||| |||||    
T  21465541 tatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacac 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 28745627 - 28745557
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||||| || || | |||| | ||| | |||| ||||||||||||||||||||||    
T  28745627 tatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 29447573 - 29447503
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||| || | |||||| ||||| ||||| ||||||||| |||||||||||    
T  29447573 tatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 394
Target Start/End: Complemental strand, 34897149 - 34897103
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttct 34897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 399
Target Start/End: Original strand, 24413500 - 24413605
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||| || |||| || ||||||||  |||  ||||||  ||||||||||||| ||||| ||||||||| ||| ||| |||  |||||    
T  24413500 tatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgtatttttc 24413599  T
Q  394 taaaaa 399  Q
    | ||||    
T  24413600 tcaaaa 24413605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 8293931 - 8293859
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    |||||||| |||| ||| ||||||  |||||||| | ||||| |||  |||||||||||||||||||||||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactg 8293859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 353  Q
    ||||||||| |||| ||||||||||| ||||| ||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 39820546 - 39820464
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacacatataattacact 377  Q
    ||||||||||||||||| || |||| |||||||| |||||||| |||||| ||| |||||||||| |||||| ||| ||||||||    
T  39820546 tatgaagcacggacacttctcggattaggcgtgt-cccgtgtcggacacgcgtcggtgtccgaca-cgacacctatgattacact 39820464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 4673355 - 4673418
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    |||||||||| |||||||||||||| |||||||| || ||||| || | | |||||||||||||    
T  4673355 tatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 11803388 - 11803317
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    |||||||||||||||||||| |||| || ||||| || ||||| |||| ||||||| ||| ||||| |||||    
T  11803388 tatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacaca 11803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 11927086 - 11927125
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 449
Target Start/End: Complemental strand, 22596068 - 22595952
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg----gtgtcc-gtgt 432  Q
    ||||||||||| |||||||||| |||| | ||||||||||| ||| ||| ||||| | |||   ||||||||||| ||||||| |    |||||| ||||    
T  22596068 gacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgttgtgtccggtgt 22595969  T
Q  433 ccgtatcagtgcttcat 449  Q
    ||||||| |||||||||    
T  22595968 ccgtatccgtgcttcat 22595952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 394
Target Start/End: Complemental strand, 38079088 - 38079017
Alignment:
Q  323 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||| ||| ||||| |||| | ||||||||||||| |||| ||||||||||||||| ||  |||||||||||    
T  38079088 cgtggcccggtgtcggacatgcgtcgtgtccgacatcgacgcatataattacactgaatcatgtgattttct 38079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 4948718 - 4948672
Alignment:
Q  346 tcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 4948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 13436911 - 13436953
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 336  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  13436911 tatgaagcacagacactccttggattaggcgtgtcccggtgtc 13436953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 20873143 - 20873089
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||| ||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 20873089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 26915200 - 26915246
Alignment:
Q  318 taaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  26915200 taaggcgtgtcccaatgtctgacacgtatcgtgtccgacaccgacac 26915246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 13009422 - 13009459
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccc 330  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  13009422 atatgaagcacggacgctccttggattaggcgtgtccc 13009459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 9414860 - 9414912
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatt 390  Q
    ||||||||||||||| |||||| |||| ||||||| ||||| ||| |||||||    
T  9414860 gacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgatt 9414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 358
Target Start/End: Original strand, 22197676 - 22197736
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||  ||| |||||||  || ||||| |||||||||| ||||||||||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 28747430 - 28747482
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaa 400  Q
    |||||||||||||||||||||||||||| ||   | | |||||||||||||||    
T  28747430 gtgtccgacaccgacacatataattacattgagctatctgattttctaaaaaa 28747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 44462151 - 44462215
Alignment:
Q  309 ctccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 373  Q
    ||||| |||| || |||||||| ||||| |||| || ||||||| ||||||||||||||| ||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgatta 44462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 44469684 - 44469748
Alignment:
Q  309 ctccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 373  Q
    ||||| |||| || |||||||| ||||| |||| || ||||||| ||||||||||||||| ||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgatta 44469748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 6401627 - 6401478
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg-----------acaccgacacatataattacactgcatt 382  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||           |||||||||||||||||||||||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  6401527 ttgtgattttctaaaaaatttagttgtgtcggcgtgt-cggtgtccgtgtc 6401478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 30098982 - 30099105
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaa 396  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| || |||| | |||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgcgattgtttaa 30099081  T
Q  397 aaaatttagctgtgtcagcgtgtc 420  Q
    ||||||||| |||||| |||||||    
T  30099082 aaaatttagttgtgtcggcgtgtc 30099105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 21814390 - 21814252
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac-----------atataattacactgcatt 382  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||           ||||||||||||||||||    
T  21814390 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcatt 21814291  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtcc 421  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  21814290 ttgtgattttctaaaaaaattagctgtgtcggcgtgtcc 21814252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 21576686 - 21576784
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||| ||| |||||||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 397
Target Start/End: Complemental strand, 42029870 - 42029767
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||| |||||||||||||| ||||||||||||||  |||| |||||| ||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  42029870 tatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttc 42029771  T
Q  394 taaa 397  Q
    ||||    
T  42029770 taaa 42029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 30502330 - 30502429
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||| ||| ||||||||| |||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 30542673 - 30542772
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||| ||| ||||||||| |||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 433
Target Start/End: Original strand, 21190998 - 21191135
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||| |||| ||||||||||| | ||| ||||||||| ||||||||||||||||| | ||||||||||| ||| ||||||||| |    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  395 aaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
     |||   ||||||||||| || ||| | |||||||||||    
T  21191098 caaattattagctgtgtcggcatgt-cagtgtccgtgtc 21191135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 32426870 - 32426965
Alignment:
Q  354 gacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||  ||||||||    
T  32426870 gacaccgacacaaataattacaatgaattatgtgattttctaaaaaatttagccgtgtcggtgcgtccggtgtccgtgtccgtatccatgcttcat 32426965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 43564999 - 43564901
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||| || |||| ||||||||||| | ||| ||||| ||||||||||||||||||||| ||||||||||||  ||| |||||||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 28588615 - 28588715
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| |||||||| | |||| | ||||||||  |||||||| | |||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  28588615 tatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttc 28588714  T
Q  394 t 394  Q
    |    
T  28588715 t 28588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 19452998 - 19453125
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----------cgacaccgacacatataattacactgcatttt 384  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||| ||||||||||           ||||||||||||||||||||||  |  |||||    
T  19452998 tgaagcacggacgctccttggataaggcgtatctccgtgtgagacatgtgtcgtgtccgacattgacacgacaccgacacatataattacggtatatttt 19453097  T
Q  385 gtgattttctaaaaaatttagctgtgtc 412  Q
    |||||||||||||||||||| |||||||    
T  19453098 gtgattttctaaaaaatttaactgtgtc 19453125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 368
Target Start/End: Original strand, 39268541 - 39268613
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatat 368  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacatat 39268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 39758327 - 39758272
Alignment:
Q  357 accgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtc 412  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaaaatttagctgtgtc 39758272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21522879 - 21522809
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| |||||||||||| |||||| ||||||||||| ||| | |||||||||||||||||||||||||||    
T  21522879 tatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21533445 - 21533375
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| |||||||||||| |||||| ||||||||||| ||| | |||||||||||||||||||||||||||    
T  21533445 tatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21542159 - 21542089
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| ||||||||| |||||||||  |||||||||| ||||| |||||||||||||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 289 - 394
Target Start/End: Complemental strand, 17123170 - 17123066
Alignment:
Q  289 gaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||| |||||||||||||||||||| |||| |||||||| |||||||| |||| || |||||||| ||||||||| ||||||||  |||  ||| |||||    
T  17123170 gaaactatgaagcacggacactcctcggattaggcgtgt-cccgtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtga 17123072  T
Q  389 ttttct 394  Q
    ||||||    
T  17123071 ttttct 17123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 394
Target Start/End: Original strand, 21194068 - 21194164
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||| |||| ||||||| ||| ||||| |||| ||||||||||| ||||| | || ||||||||||||| ||  |||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttct 21194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 26312875 - 26312803
Alignment:
Q  306 acactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    |||||||| |||| ||| ||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactg 26312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 422
Target Start/End: Complemental strand, 42893478 - 42893350
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| ||||||||||   || ||||||||||  ||||| ||||||||| ||||| ||||||||||| | ||||||||||| ||| |||||||||     
T  42893478 tatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttt 42893379  T
Q  394 taaaaaatttagctgtgtcagcgtgtccg 422  Q
    | |||   ||||||||||| | |||||||    
T  42893378 tcaaattattagctgtgtcggtgtgtccg 42893350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 31084446 - 31084315
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac-----cgacacatataattacactgcattttgtga 388  Q
    |||||| ||||||||||||| |||| |||| |||||| ||||| |||||||||||||||||||||     |||||| | |||||||| || ||| |||||    
T  31084446 tatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtga 31084347  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||| | |||   ||||||||||| |||||||    
T  31084346 ttttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 18421779 - 18421882
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtc----cccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatt 390  Q
    ||||||||| ||||||||| |||| || ||||||    || ||| | |||| |||||||||||||| ||||||||||||||||||||| ||| |||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgatt 18421878  T
Q  391 ttct 394  Q
    ||||    
T  18421879 ttct 18421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 39698670 - 39698600
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| || || |||||||||||||||||||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 14873640 - 14873535
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc-----gacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| ||||||||||| ||||  ||||||||| | ||||     ||||||||||||||||||||||||  ||| ||||     
T  14873640 tatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgc 14873541  T
Q  389 ttttct 394  Q
    ||||||    
T  14873540 ttttct 14873535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 23015926 - 23016030
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac-----cgacacatataattacactgcattttgtgat 389  Q
    ||||||| ||||||||||| |||| |||||||||||  |||| ||||| |||||||||||| ||     |||||| ||||||||||||| ||| ||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgat 23016025  T
Q  390 tttct 394  Q
    |||||    
T  23016026 tttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||||| |||| ||||||||||  ||||  |||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 23012380 - 23012430
Alignment:
Q  325 tgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    |||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattaca 23012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 4105374 - 4105282
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgat 389  Q
    ||||||||||||||||| |||| ||||||||||| || |||||||| | ||| ||| || ||| |||| | ||||||||||| ||| ||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgat 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 18592200 - 18592132
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||| | | || || ||||||||  |||||||||||||| |||||||||||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 27932353 - 27932253
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||  |||||||| | || ||||||||||  ||||| |||||||||||||||||||||| | |  | ||||||||||| ||| ||| ||||||    
T  27932353 tatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttc 27932254  T
Q  394 t 394  Q
    |    
T  27932253 t 27932253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 30098455 - 30098391
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||| |||| |||| ||| ||||||  ||||| |||||||||||||||||||||    
T  30098455 tatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||| |||| ||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 7677834 - 7677764
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||| ||| ||||| |||| ||||||||||| ||||| |||| ||| |||||| |||||||||||    
T  7677834 tatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 32630676 - 32630802
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||  ||||||||| | || ||| ||||| |  |||| |||||||||||| |||||||| |||||||||||||||| || ||| | | ||||||    
T  32630676 tatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttc 32630775  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   ||| | |||||||||||||    
T  32630776 tcaaattattatcggtgtcagcgtgtc 32630802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 3966562 - 3966521
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttct 3966521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 19579829 - 19579760
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| |||| |||||||| |||| ||||||||||| |||| |||||  ||||||||||||||| |||||    
T  19579829 atgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacac 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 6770654 - 6770523
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||| | |||| |||||||| || |     |||| |||||||||||||||| |||||  |||| ||||||| ||| ||||||||||    
T  6770654 tatgaagcacggacactcttcggattaggcgtgtaccag-----gacatgtgtcgtgtccgacactgacac--ataagtacactgaattatgtgattttc 6770562  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    | |||   |||| |||||||| |||| | |||||||||||    
T  6770561 ttaaattattagttgtgtcagtgtgt-cagtgtccgtgtc 6770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 16203785 - 16203836
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||||||||||||||||||||||||||||  ||| || ||||||||    
T  16203785 gtgtcttgtccgacaccgacacatataattacactaaattatgagattttct 16203836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 16304367 - 16304438
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    ||||||||||||||| |||| |||| || |||||| | ||||| | |||||||||||||||| || ||||||    
T  16304367 tatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 422
Target Start/End: Complemental strand, 34879415 - 34879340
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    ||||||||||| |||||||||| ||||||||| ||| | ||||||||| |||  |||||| ||| | |||||||||    
T  34879415 cgtgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccg 34879340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 37328844 - 37328883
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttt 37328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 41995581 - 41995534
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    ||||||||||||||||||| |||| |||||||||| |||||| |||||    
T  41995581 atgaagcacggacactcctaggattaggcgtgtcctcgtgtccgacac 41995534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 3966632 - 3966562
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| || ||||||||  |||  ||||| ||| ||||||||||| |||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacac 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6247692 - 6247642
Alignment:
Q  342 cgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||| |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  6247692 cgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 6247642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Complemental strand, 15382457 - 15382423
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  15382457 cgtgtccggtgtccgtgtccgtatccgtgcttcat 15382423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 23289999 - 23290049
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 344  Q
    ||||||||||||||| | ||||||| || |||||||| |||||||||||||    
T  23289999 tatgaagcacggacattgcttggattagacgtgtcccggtgtcagacacgt 23290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 24238603 - 24238661
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 353  Q
    ||||||||||||||||||| |||| | || |||||| ||||  ||||||||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtcc 24238661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 32766873 - 32766943
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||| || ||| |||  ||||| |||||||||||| | ||||||||||||    
T  32766873 tatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacac 32766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 36642696 - 36642757
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 359  Q
    ||||||| |||||||||   || ||||||||||| ||||| ||||||||||||||||||||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtccc-gtgtcggacacgtgtcgtgtccgacacc 36642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 6471889 - 6471930
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttct 6471930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 19820329 - 19820389
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 357  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| ||||   |||||||||||||    
T  19820329 tatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 41091257 - 41091298
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||||||||||||||||||| ||| |||||||||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttct 41091298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  301 cacggacactccttggataaggcgtgtccccgtgtcagacacgtg 345  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 330
Target Start/End: Complemental strand, 35017161 - 35017125
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccc 330  Q
    |||||||||||||||||||| |||| |||||||||||    
T  35017161 tatgaagcacggacactcctcggattaggcgtgtccc 35017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 40000494 - 40000558
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||||||  |||||| |||||| | ||||||| ||| ||||| || ||||||    
T  40000494 tatgaagcacggacactcctcagataagacgtgtctcggtgtcaggcacatgtcgcgtacgacac 40000558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 5414102 - 5414251
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac-----------atataattacactgcatt 382  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||           ||||||||||||||||||    
T  5414102 tatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcatt 5414201  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  5414202 ttgtgattttctaaaaaaattagctgtgtcggcgtgtcc-gtgtccgtgtc 5414251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 23292927 - 23293053
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||| | |||||| |||| ||| |||||||||     
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttt 23293026  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   ||||||||||| |||||||    
T  23293027 tcaaattattagctgtgtcggcgtgtc 23293053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 19097836 - 19097941
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||| |||  |||||||||    
T  19097836 tatgaagcacagacactctttgg-taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgattttc 19097934  T
Q  394 taaaaaa 400  Q
    |||||||    
T  19097935 taaaaaa 19097941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 298 - 420
Target Start/End: Complemental strand, 49431140 - 49431017
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaa 397  Q
    ||||| |||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||| |  |    
T  49431140 aagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttca 49431041  T
Q  398 aaat-ttagctgtgtcagcgtgtc 420  Q
    || | ||||||||||| |||||||    
T  49431040 aattattagctgtgtcggcgtgtc 49431017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 30982807 - 30982878
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  30982807 atatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 28964189 - 28964287
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| |||||||||| |||| ||||||||||| ||||| || | |||||||||||||||| ||||| | ||||||||||| ||| |||||||||    
T  28964189 tatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 8423659 - 8423759
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||| ||||||||||| ||  ||| ||||||||||| ||||| ||||  ||||||||||||||||||||  ||||||||||||| ||| ||||||||||    
T  8423659 tatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttc 8423758  T
Q  394 t 394  Q
    |    
T  8423759 t 8423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 46083921 - 46084050
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----------cgacaccgacacatataattacactgcatt 382  Q
    ||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||  |||    
T  46083921 tatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagatt 46084020  T
Q  383 ttgtgattttctaaaaaatttagctgtgtc 412  Q
     |||||||| |||||| | |||||||||||    
T  46084021 atgtgatttactaaaacaattagctgtgtc 46084050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||||||| |||| |||||| || ||||||||| ||||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 12895215 - 12895297
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacac 376  Q
    ||||||||||| |||||||| |||| |||||||||||  |||| || || ||||||||||||||||||||| |||||||||||    
T  12895215 tatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacac 12895297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 34306745 - 34306843
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||| ||| ||||  ||| ||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||| |||| | |||||||    
T  34306745 tatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt 34306843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 715546 - 715646
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc--gacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| ||||||||| |  |||||| |||| | ||||||||||| ||| ||||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattt 715645  T
Q  392 t 392  Q
    |    
T  715646 t 715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 752872 - 752972
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc--gacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| ||||||||| |  |||||| |||| | ||||||||||| ||| ||||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattt 752971  T
Q  392 t 392  Q
    |    
T  752972 t 752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 24613631 - 24613700
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||||||||||||||| |||| || |||||||  ||||||||||||||||||||| ||||||||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 35161154 - 35161054
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||  | |||| ||| |||| || ||||| ||||||||||||||||||| | || || ||||||||||||| ||| ||||||||||    
T  35161154 tatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgattttc 35161055  T
Q  394 t 394  Q
    |    
T  35161054 t 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 2361916 - 2361999
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    |||||||||||||||||| |  ||| ||| ||||| | |||||||||||| |||||||||||||||||||| | ||||||||||    
T  2361916 tatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacact 2361999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 12797282 - 12797377
Alignment:
Q  297 gaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||| ||| |||| |||| || | |||||| |||||||||| || ||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 12797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 417
Target Start/End: Original strand, 54580008 - 54580087
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgt 417  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||| | |||   |||| |||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 16073512 - 16073414
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| |||||||||| |||| |||||||||   ||||| |||| || ||||||||||||||||||| | ||||||||||| ||| || ||||||    
T  16073512 tatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 35157926 - 35158024
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||| || |||| | |||||| || ||||  |||| |||||||||| ||||||||||| ||||||||||||  ||| |||||||||    
T  35157926 tatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 36635448 - 36635342
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac-----cg-acacatataattacactgcattttgtg 387  Q
    |||||||||||||||||| | |||| ||||||||||| ||||| ||| ||||||||||| |||||     || |||||||||||||||||| ||| ||||    
T  36635448 tatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtg 36635349  T
Q  388 attttct 394  Q
    |||||||    
T  36635348 attttct 36635342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||||||||||||| |||| ||| ||||||  ||||| |||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 848081 - 848015
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 359  Q
    ||||||| |||||||||||||||||| ||| ||||||| ||||  ||||||| ||||||||||||||    
T  848081 atatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 19482797 - 19482727
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| |||||||| |||| ||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  19482797 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacac 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 19500788 - 19500858
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||| ||||||||||| ||||||| | | || |||||  |||||||||||||||||||||||    
T  19500788 tatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacac 19500858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 29205533 - 29205464
Alignment:
Q  323 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||| ||||| |||| ||||||||||| |||||||||| | ||||||||||| ||| |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgatttt 29205464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 36509074 - 36509131
Alignment:
Q  335 tcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  ||| |||||||||    
T  36509074 tcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgatttt 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 40179626 - 40179675
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  40179626 gtgtcgtgtccgacaccgacgcatataattacactgaattatgtgatttt 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 20950362 - 20950458
Alignment:
Q  288 tgaaaatatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcatttt 384  Q
    |||| |||||||| |||| |||||||||||| | ||||||  | ||||   ||| || ||||||| ||||||||||||||||||||||||| |||||    
T  20950362 tgaatatatgaagtacgggcactccttggattatgcgtgtttctgtgttgaacatgtatcgtgtctgacaccgacacatataattacactgaatttt 20950458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 393
Target Start/End: Original strand, 4672026 - 4672125
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| |||||||||||||| || | ||| || |||||  |||||| | || |||||||||||||||||||  ||||||| ||| ||| ||||||    
T  4672026 tatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatgtaattttc 4672125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 412
Target Start/End: Complemental strand, 21945610 - 21945503
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaattta 404  Q
    ||||||||| |||| ||||||||  | ||||| |||| ||||| |||||||||||||||| | ||||||||||| ||| ||| ||||| | |||   |||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 21945511  T
Q  405 gctgtgtc 412  Q
    ||||||||    
T  21945510 gctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc 347  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 29205586 - 29205527
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc 353  Q
    ||||||||||| |||||||| |||| ||||||||||| ||||| |||| |||||||||||    
T  29205586 tatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 53381531 - 53381602
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 364  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| || ||| ||| |||||||||||||||||    
T  53381531 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 32273462 - 32273524
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 356  Q
    |||||||||| ||||||||||||||  | ||||||||||| || || ||||||||||||||||    
T  32273462 tatgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgac 32273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 420
Target Start/End: Complemental strand, 40613504 - 40613442
Alignment:
Q  358 ccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||  ||||| ||||| |||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtc 40613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 42640642 - 42640549
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||| |||||| |||| ||||||||||  ||| | ||||     |||||||||||||||||| | ||||||||||| ||| |||||||||    
T  42640642 tatgaagcacggaaactcctcggattaggcgtgtcctggtgccggaca-----cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 4157266 - 4157169
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| ||||||||| | || ||| || || | ||||| |||| |||||||||||||||||||||| | ||||| ||||  ||| |||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 4157553 - 4157456
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||  ||||||||| | || |||||| || | ||||| |||| |||||||||||||||||||||| | ||||| ||||  ||| |||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 14465005 - 14465070
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||||||||||||||  ||| || |||||||| |||||  |||||||||||||| |||||    
T  14465005 atatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 30299006 - 30298910
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaat-ttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||| | ||||||||||| ||| ||| ||||| |  ||| | ||||||||||| ||||||| | |||||||||||||||| |||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcag-tgtccgtgtccgtatctgtgcttcat 30298910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 30327874 - 30327778
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaat-ttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||| | ||||||||||| ||| ||| ||||| |  ||| | ||||||||||| ||||||| | |||||||||||||||| |||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcag-tgtccgtgtccgtatctgtgcttcat 30327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 13783340 - 13783261
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||| ||||||||||||||||| |||||||||| |||| ||| | ||||| ||||| | |||| | |||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgt-cagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 18966627 - 18966567
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg 354  Q
    ||||||||||||||||||||| ||| |||||| ||||  |||| ||||||||| |||||||    
T  18966627 tatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 4383488 - 4383449
Alignment:
Q  290 aaaatatgaagcacggacactccttggataaggcgtgtcc 329  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  4383488 aaaatatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 10499260 - 10499311
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||| ||||||||| ||||||||||||||||||  ||| |||||||||||    
T  10499260 gtgtcgggtccgacactgacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 16189773 - 16189710
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgt 411  Q
    ||||||| |||||||||| |||||||||||| ||| ||||||||||| |||  |||||| ||||    
T  16189773 gtgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 23861370 - 23861445
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatata 369  Q
    ||||||||||| |||||| ||| || |||||||||   ||| |||||| ||||||| || ||||||||||||||||    
T  23861370 tatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatata 23861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 24343631 - 24343560
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||  ||||||||||| ||||| |||||| ||| ||||| |||||||||||    
T  24343631 tatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 44132644 - 44132691
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaa 400  Q
    ||||||||||||||||||||| |||| |||  ||||||||||||||||    
T  44132644 cgacaccgacacatataattatactgaattacgtgattttctaaaaaa 44132691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 8402721 - 8402783
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||| |||||||||| ||||| || |||||||||||||||| ||| | |||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttct 8402783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 9996920 - 9996858
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||| |||||||||  |||| |||||||| ||||||||||| |||| ||| |||||||||||    
T  9996920 gtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttct 9996858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 22234820 - 22234890
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| ||||| || |||| ||  ||||||  ||||| ||||||||||||||| |||||||||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Original strand, 23293065 - 23293099
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  23293065 cgtgtccggtgtccgtgtccgtatctgtgcttcat 23293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 30838335 - 30838269
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||| || | |||||||||   ||||| ||||||||||| ||||||||| |||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 3064869 - 3064926
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 351  Q
    |||||||||||||||||||| |||| ||||||||| | | ||| |||| |||||||||    
T  3064869 tatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 6879459 - 6879532
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||||||||||||||| | ||||||||||  ||| |||||||||   |||||||| ||| |||| |||||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaaaattttgctatgtcggcgtgtc 6879532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 449
Target Start/End: Original strand, 12895116 - 12895210
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||| | |||||||  || ||| ||||||||| | |||   |||||||| || |||||||  ||||||||||||||||| |||||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc--gtgtccgtgtccgtatctgtgcttcat 12895210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgt 344  Q
    ||||||||||||||||||| |||| ||||||||||  ||||| |||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 42015022 - 42014965
Alignment:
Q  349 tgtccgacaccgacacatataattacactgcattt-tgtgattttctaaaaaatttag 405  Q
    ||||||||||| |||||||||||||||||| |||| ||||||| ||| |||| |||||    
T  42015022 tgtccgacaccaacacatataattacactgaatttatgtgattatctcaaaattttag 42014965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 5775305 - 5775341
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccc 330  Q
    |||||||||||||||||||| |||| |||||||||||    
T  5775305 tatgaagcacggacactcctcggattaggcgtgtccc 5775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 5775359 - 5775399
Alignment:
Q  354 gacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||||||||  ||| |||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttct 5775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 13307957 - 13307885
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaattta 404  Q
    ||||| |||||||||||||||||||||| |||| | | |||||| || ||| ||| ||||||| |||| ||||    
T  13307957 gtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaaatttta 13307885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 22234890 - 22234973
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtga-ttttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgt 436  Q
    ||||||||||||||| |||||||||| ||| ||||| |||| | |||  |||||| ||||| |||||||| |||||||| |||||    
T  22234890 cgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtcc-gtgtccgtatccgt 22234973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 30103298 - 30103397
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||  ||||||||| |||| ||  ||||||   |||||||||  ||||||||  ||||||||||||||| ||||||||  ||| ||||||||||    
T  30103298 tatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattttc 30103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 18367965 - 18367828
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccg-----------acacatataattacactgcatt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||           ||||||||||||||||||||||    
T  18367965 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcatt 18367866  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  18367865 ttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 16488520 - 16488658
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac-----------accgacacatataattacactgcatt 382  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||           ||||||||||||||||||||||||||    
T  16488520 tatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcatt 16488619  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtcc 421  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  16488620 ttgtgattttctaaaaaaattagctgtgtcggcgtgtcc 16488658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 13789272 - 13789134
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||  || |||||||||||||||||||||| |||||||     
T  13789272 tatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgattttt 13789173  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    | |||||||||||||||||  ||||| || ||||||||||    
T  13789172 ttaaaaatttagctgtgtcgacgtgt-cgatgtccgtgtc 13789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 294 - 433
Target Start/End: Complemental strand, 13797891 - 13797753
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||| |||||||||  || |||||||||||||||||||||| |||||||     
T  13797891 tatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgattttt 13797792  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    | |||||||||||||||||  ||||| || ||||||||||    
T  13797791 ttaaaaatttagctgtgtcgacgtgt-cgatgtccgtgtc 13797753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 294 - 449
Target Start/End: Original strand, 17841530 - 17841684
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| ||||| ||||||||||||||||| ||| | ||||||||||  ||| |||||||||     
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   ||||||||||| |||||| | |||||||||||||||||||||||||||    
T  17841630 tcaaattattagctgtgtcggcgtgt-cagtgtccgtgtccgtatcagtgcttcat 17841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 34595252 - 34595154
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||    
T  34595252 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 293 - 433
Target Start/End: Complemental strand, 9658999 - 9658859
Alignment:
Q  293 atatgaagcacggacactccttgga-taaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    ||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||  ||||||||| |||||||||||||| ||| ||||||||    
T  9658999 atatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattt 9658900  T
Q  392 tctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    ||| |||   ||||| ||||| |||||| | |||||||||||    
T  9658899 tcttaaattattagcggtgtcggcgtgt-cagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 28152216 - 28152063
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| |||||||| |||| |||| |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||     
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt- 28152118  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   |||||| |||| |||||| | |||||||||||| |||| |||||||||    
T  28152117 tcaaattattagctttgtcggcgtgt-cagtgtccgtgtccatatccgtgcttcat 28152063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 417
Target Start/End: Original strand, 17327591 - 17327719
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc-----gacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||      |||||||||| |||||||  ||| |||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtga 17327690  T
Q  389 ttttctaaaaaatttagctgtgtcagcgt 417  Q
    |||||| ||||  |||| |||||| ||||    
T  17327691 ttttctcaaaatcttagttgtgtcggcgt 17327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 422
Target Start/End: Original strand, 32978842 - 32978969
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttcta 395  Q
    ||||||||||||||||||||||| || |||||||| ||||| |||| |||||||||||||||||||||| | ||||||||||  ||| |||| |||| |     
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgtttttttt 32978941  T
Q  396 aaaaat-ttagctgtgtcagcgtgtccg 422  Q
     ||| | ||||||||||| |||||||||    
T  32978942 caaattattagctgtgtcggcgtgtccg 32978969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 7996325 - 7996419
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    |||||||||| ||||||||||||||| ||| | |||||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 7996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 8022476 - 8022382
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    |||||||||| ||||||||||||||| ||| | |||||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttct 8022382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 293 - 445
Target Start/End: Original strand, 5626640 - 5626792
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||  |||||||| ||||||||| ||| ||| |  |||    ||||||||||||||||||||||||||| |||||||| | |  ||||||||    
T  5626640 atatgaagcacaaacactcctcggataaggcatgttcccattacag----gtgtcgtgtccgacaccgacacatatatttacactgaactaagtgatttt 5626735  T
Q  393 ctaaaaaatttagctgtgtcagcgtgtccg----gtgtccgtgtccgtatcagtgct 445  Q
    |||||||| |||| |||||| ||||||| |    ||||||||||||||||| |||||    
T  5626736 ctaaaaaaattagttgtgtcggcgtgtcagtgtcgtgtccgtgtccgtatccgtgct 5626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 7378097 - 7377979
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||| ||  ||| || |||||||| ||||| ||  | |||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  7378097 tatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttc 7377998  T
Q  394 taaaaaatttagctgtgtc 412  Q
    | |||  |||||| |||||    
T  7377997 tcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 33001230 - 33001328
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||  |||||| |||||| |||||| |  | |||||||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  33001230 tatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 394
Target Start/End: Original strand, 7265535 - 7265634
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||| ||||| |||| |||| | | || ||||| |||| || | ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 8365449 - 8365519
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||| |||||| |||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  8365449 tatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 10339055 - 10339125
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| |||| ||||||||||||||||||||||    
T  10339055 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 28715413 - 28715315
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||| ||||| || | || ||||||||||| |||||  |||||||||||||||||||||||||| | ||||||||||| ||| ||| |||||    
T  28715413 tatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 433
Target Start/End: Original strand, 8776909 - 8777052
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagaca-----cgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| ||| ||||| | ||||| ||||     |||||||||||||||||| |||| | ||||||||||| |||||||||    
T  8776909 tatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtga 8777008  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||| | |||   |||| |||||| |||||| | |||||||||||    
T  8777009 ttttttcaaattattagttgtgtcggcgtgt-cagtgtccgtgtc 8777052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 13360314 - 13360413
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||| | |||| ||||||||| | ||||| ||||  ||| ||||| |||||||| |||||||||||||||| ||| ||||||||||    
T  13360314 tatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttc 13360412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 31385048 - 31384984
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||| ||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacac 31384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 32511607 - 32511707
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||||||  ||| |||||||  ||  |||||||||  |||||| ||||||||| |||| ||||||||||||| ||| ||||||||||    
T  32511607 tatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttc 32511706  T
Q  394 t 394  Q
    |    
T  32511707 t 32511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 4878060 - 4877982
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 373  Q
    |||||||||||||||||||| |||| |||||||| || ||||| |||| |||||||||||||||||||||| | ||||||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 4877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 16766826 - 16766756
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||| || | |||| ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  16766826 tatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 19040421 - 19040344
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||   ||||| ||||| |||||||    
T  19040421 gtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 19040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 7740712 - 7740660
Alignment:
Q  341 acgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  7740712 acgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttc 7740660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 13364646 - 13364746
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||| | |||  || |||||||  |||||||||| || |||||||| |||||||||||||| ||||||||| ||| | ||||||||    
T  13364646 tatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttc 13364745  T
Q  394 t 394  Q
    |    
T  13364746 t 13364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 30851676 - 30851637
Alignment:
Q  336 cagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30851676 cagacacgtgtcgtgtccgacaccgacacatataattaca 30851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 4388198 - 4388088
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| |||||| || ||||||||||||||| ||||||||||||  | |     |||||| ||||||||||||||| ||| ||| ||||||||||    
T  4388198 tatgaagcacagacacttctcggataaggcgtgtcctcgtgtcagacacc-gcca----cgacactgacacatataattaccctggattatgtgattttc 4388104  T
Q  394 taaaaaatttagctgt 409  Q
    ||||||| || |||||    
T  4388103 taaaaaaattggctgt 4388088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 7977771 - 7977897
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| ||||||||| ||| ||||||||  |  |||| ||||  ||| ||||||||||||||||| | ||||||||||| ||| ||| |||||     
T  7977771 tatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttt 7977870  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   ||||||||||| |||||||    
T  7977871 tcaaattattagctgtgtcggcgtgtc 7977897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 26562748 - 26562679
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccg 422  Q
    ||||| |||||||||||||||||||| ||| ||||||||||| |||  |||||| ||||| |||||||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccg 26562679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 34446689 - 34446618
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacac 364  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||| ||| ||||  |||||||||||    
T  34446689 tatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgttggacaccgacac 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 7248487 - 7248417
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| ||||  | |||||||| ||||| ||||| ||| |||||| ||||||||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 9107300 - 9107370
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||| ||||||| |||| ||| ||||||| ||||| |||||  || |||||||||||||||||    
T  9107300 tatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 24645599 - 24645501
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||| ||||||| | |||| || ||||||   ||||| ||||||||||||||| ||||||||||| | ||| || |||| ||| |||||||||    
T  24645599 tatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 9025494 - 9025535
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttct 9025535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 31579212 - 31579266
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||| ||||||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacac--ataattacactgaattatgtgattttct 31579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 447
Target Start/End: Original strand, 4118412 - 4118444
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttc 447  Q
    |||||||||||||||||||||||||||||||||    
T  4118412 cgtgtccggtgtccgtgtccgtatcagtgcttc 4118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 16833426 - 16833267
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||| || ||||||||| ||||  || ||||||  ||||| ||| |||||||||||  |||||||||| | ||||||||||| | | |||||||||     
T  16833426 tatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttt 16833327  T
Q  394 taaaaaatttagctgtgtcagcgtgtc-----cggtgtccgtgtccgtatcagtgcttcat 449  Q
    | |||   |||| |||||| |||||||     | |||| ||||||||||||||||||||||    
T  16833326 tcaaattattagttgtgtcggcgtgtcagtgtctgtgt-cgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 853811 - 853898
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||| |||||| ||||||||| |  |||| ||||| |||||| |||||||||||||| | ||||| ||||  ||| |||||||||    
T  853811 gacactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgatttt 853898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 5732504 - 5732551
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||||||||  | | |||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttct 5732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 377
Target Start/End: Original strand, 6898222 - 6898305
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    ||||||||||| |||||| | |||| ||||||||  | ||||  ||||||  ||||||||||||||||||| | ||||||||||    
T  6898222 tatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacact 6898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 7027301 - 7027262
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 329
Target Start/End: Complemental strand, 10649406 - 10649371
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtcc 329  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10649406 tatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 449
Target Start/End: Complemental strand, 7938096 - 7938062
Alignment:
Q  415 cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||||| |||||||||    
T  7938096 cgtgtccggtgtccgtgtccgtatccgtgcttcat 7938062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 8714109 - 8714039
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||  ||||||||| ||||  ||||||||||  |||| || | ||||||||||||||||||||||    
T  8714109 tatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 8931602 - 8931668
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgt 419  Q
    ||||| ||||||||||||||| |||| ||| ||| ||||||| |||  |||||||||||| ||||||    
T  8931602 cgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgt 8931668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 9107370 - 9107436
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgt 419  Q
    |||||||||||| | ||||||||||| ||||||||||||| | |||   ||||||||||| ||||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgt 9107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 394
Target Start/End: Complemental strand, 9629443 - 9629401
Alignment:
Q  352 ccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttct 9629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 378
Target Start/End: Original strand, 21924930 - 21924960
Alignment:
Q  348 gtgtccgacaccgacacatataattacactg 378  Q
    |||||||||||||||||||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactg 21924960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 31959268 - 31959214
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg 348  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| ||||| |||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 7029891 - 7029850
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttgggg 491  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||    
T  7029891 gtgaagttgacgagtttcggggatagggttttgttcttgggg 7029850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 8389411 - 8389513
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacac-gtgtcgtgtccgacaccgaca---ca-tataattacactgcattttgtgatt 390  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| ||||| |||| | ||||||||||||||   || ||||||||||||| ||| | |||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacactataattacactgaattatatgatt 8389509  T
Q  391 ttct 394  Q
    ||||    
T  8389510 ttct 8389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 491
Target Start/End: Original strand, 9159533 - 9159574
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttgggg 491  Q
    |||||||| |||||||| ||||||||||||||||| ||||||    
T  9159533 gtgaaattaacgagtttaggggatagggttttgttcttgggg 9159574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 491
Target Start/End: Complemental strand, 9170895 - 9170854
Alignment:
Q  450 gtgaaattgacgagtttgggggatagggttttgtttttgggg 491  Q
    |||||||| |||||||| ||||||||||||||||| ||||||    
T  9170895 gtgaaattaacgagtttaggggatagggttttgttcttgggg 9170854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 9617493 - 9617452
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||||||| || ||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttct 9617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 29020985 - 29020932
Alignment:
Q  339 acacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||| || ||||||    
T  29020985 acacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgatttt 29020932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 1191679 - 1191759
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtc 412  Q
    ||||| |||||| ||||||||| ||| |||||| | ||||||||||| ||||||||| ||| | |||   |||||||||||    
T  1191679 gtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 1700416 - 1700372
Alignment:
Q  348 gtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||||||||||| ||||||||||||| | | |||||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttt 1700372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 449
Target Start/End: Original strand, 5970183 - 5970215
Alignment:
Q  417 tgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    ||||||||||||||||||||||| |||||||||    
T  5970183 tgtccggtgtccgtgtccgtatctgtgcttcat 5970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 7938218 - 7938170
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    |||||||||||||||||||| |||| ||||||||| | ||||| |||||    
T  7938218 tatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 9027237 - 9027158
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||||||||||||||||||| | ||| ||||||| ||| |||   ||||| ||||| |||||| | |||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgt-cagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 9523001 - 9522949
Alignment:
Q  313 ttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 365  Q
    |||||| ||||||||| | ||||| |||||||||||  |||||||||||||||    
T  9523001 ttggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacaca 9522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 9629512 - 9629448
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||| |||||||||| |||| || |||||| | ||||| ||||| ||| |||||||||||    
T  9629512 tatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 24138545 - 24138485
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||||||| | |||| |||| |||| | |||||||||||||||| ||||| ||||    
T  24138545 aagcacggacactcttcggattaggcatgtctctgtgtcagacacgtgtcatgtccaacac 24138485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 18212974 - 18213080
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  18212974 tatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgattttc 18213073  T
Q  394 taaaaaa 400  Q
    |||||||    
T  18213074 taaaaaa 18213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 405
Target Start/End: Complemental strand, 39138560 - 39138451
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttcta 395  Q
    |||||||| || |||| | ||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttcta 39138461  T
Q  396 aaaaatttag 405  Q
    ||||||||||    
T  39138460 aaaaatttag 39138451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 15680927 - 15680773
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| | || || |||||| | ||||| ||||||||||||||||||||||||||| ||||||||||||  ||| |||||||||     
T  15680927 tatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttt 15680828  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |  ||   |||||| |||| |||||| | |||||| |||||||||| |||||||||    
T  15680827 tttaattattagctatgtcggcgtgt-cagtgtccatgtccgtatccgtgcttcat 15680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 32287404 - 32287504
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| ||||| |||| ||||||||||||||||||||| || ||||| ||| ||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  394 t 394  Q
    |    
T  32287504 t 32287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 294 - 449
Target Start/End: Complemental strand, 9778623 - 9778454
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccg-----acaccgacacatataattacactgcattttgtga 388  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||     |||||||||| | |||||| |||| ||| |||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtga 9778524  T
Q  389 ttttctaaaaaatttagctgtgtcag---------cgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||| | |||   | |||||||||||         ||||||||||||||||||||||||| |||||||||    
T  9778523 ttttttcaaattatcagctgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcat 9778454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 20549909 - 20549809
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||| ||||||| |||| ||||||||| |  |||| |||| |||| ||||||||||||||||||||||||||||||| |||  |||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  394 t 394  Q
    |    
T  20549809 t 20549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 21880270 - 21880170
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||| || |||| ||||||||||  ||||| |||| |||||||||||||||||||||| | ||||||||||| ||| ||| ||||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttc 21880171  T
Q  394 t 394  Q
    |    
T  21880170 t 21880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 5409772 - 5409903
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||||     |||||||||||| | ||||| ||||| ||| |||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtga 5409871  T
Q  389 ttttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||| | |||   |||||||| ||||||||||    
T  5409872 ttttttcaaattattagctgtatcagcgtgtc 5409903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 375
Target Start/End: Complemental strand, 598326 - 598245
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| ||||||||||||||| ||||||||||| || |||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 43027405 - 43027508
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacactgcattttgtga 388  Q
    |||||||||||||||||| | |||| ||||||||||| ||||| |||||||||||||||     |||||||||||| | || |||||||||||| |||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtga 43027504  T
Q  389 tttt 392  Q
    ||||    
T  43027505 tttt 43027508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 24339771 - 24339701
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||| ||||||| |||| ||||||||||| ||||| || ||||||||||||||||||||||||    
T  24339771 tatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 21864926 - 21864843
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    |||||||||| ||||||||| | || || |||||||| ||||| |||||||||||||||||||| |||||| | ||||||||||    
T  21864926 tatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacact 21864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 32093955 - 32094020
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtcccc-gtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||| |||||||| |||| |||||||||||| ||||| |||||||||||||||||||||    
T  32093955 tatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 5835337 - 5835265
Alignment:
Q  322 gcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||| || |||||||| |||| |||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  5835337 gcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 9483003 - 9482952
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttct 9482952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 12278943 - 12278853
Alignment:
Q  304 ggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg-tgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||| |||| ||| ||||||| |||||||||||| || | |||||||||| ||||||||||||||||||| ||| ||| |||||||    
T  12278943 ggacactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgacac-gacacatataattacactgaattatgtcattttct 12278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 25822784 - 25822717
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 361  Q
    |||||| |||||||||||||| ||| |||| ||||||  ||||||||||||||||||||||| |||||    
T  25822784 tatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccga 25822717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 26733411 - 26733324
Alignment:
Q  305 gacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||| ||| |||| |||||||| ||||| || |||| | |||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 22484143 - 22484017
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||||||| || |||| || | |||| |  |||| |||| ||||| |||| |||||||||||||||||||| |||| ||| ||  ||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttc 22484044  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||   ||||| ||||| |||||||    
T  22484043 taaaattattagcggtgtcggcgtgtc 22484017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 388
Target Start/End: Complemental strand, 33994330 - 33994236
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtga 388  Q
    |||||| |||| ||||||||||||| ||||||||| | ||||  |||| |||||||||| ||||||||||| | ||||| ||||| ||| |||||    
T  33994330 tatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 18035806 - 18035909
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    |||||||||||||||||||| |||| || ||||| || |||||||||| ||||| | ||  |||| ||||||| ||||||| ||| ||| |||||||| |    
T  18035806 tatgaagcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgatttcc 18035904  T
Q  394 taaaa 398  Q
    |||||    
T  18035905 taaaa 18035909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 1433577 - 1433490
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacac 376  Q
    |||||||||||||||||||| |||| || |||||||  ||||| ||||| |||| ||||     ||||||||||||||||||||||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacac 1433490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 392
Target Start/End: Complemental strand, 41020607 - 41020516
Alignment:
Q  301 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||| || |||||| || |||||||| |||| ||| | ||||||||| | |||||||| ||||||||||||||  ||| |||||||||    
T  41020607 cacggacattctttggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttt 41020516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 21568562 - 21568692
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcg-tgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||| |||||||||  ||| | || |||||| ||||| |||||| || | | |||||||||||| ||||| ||||||||  ||| || ||||||    
T  21568562 tatgaagcacagacactcctcagattaagcatgtcccggtgtccgacacgcgttggtatccgacaccgactcatatgattacacttaattatgagatttt 21568661  T
Q  393 ctaaaaaatttagctgtgtcagcgtgtccgg 423  Q
    || |||   ||||| ||||||||||||||||    
T  21568662 cttaaattattagccgtgtcagcgtgtccgg 21568692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 25482020 - 25481894
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||||| |||| ||| || | ||||||  |  |||| ||||| | |||||||||||||| |||| | ||||||||||| ||| |||||||||     
T  25482020 tatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttt 25481921  T
Q  394 taaaaaatttagctgtgtcagcgtgtc 420  Q
    | |||   ||||||||||| |||||||    
T  25481920 tcaaattattagctgtgtcggcgtgtc 25481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 27093364 - 27093454
Alignment:
Q  304 ggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||| | |||| ||| ||||||  ||||| ||||| |||||||||  |||||||| ||||||||||||||  ||| |||||||||||    
T  27093364 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27093454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 27184937 - 27184847
Alignment:
Q  304 ggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||| | |||| ||| ||||||  ||||| ||||| |||||||||  |||||||| ||||||||||||||  ||| |||||||||||    
T  27184937 ggacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttct 27184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 1401141 - 1401043
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||| ||||||||||  ||| ||| |||||||  |||| ||||  ||||||||| |||||||| || ||||||||||||| ||| ||||| ||||    
T  1401141 tatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttc 1401044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 363
Target Start/End: Complemental strand, 7438835 - 7438766
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 363  Q
    |||||||||||||||||||||| || ||||||||||  |||||  ||| |||||||||  ||||||||||    
T  7438835 tatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgaca 7438766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 19213870 - 19213817
Alignment:
Q  345 gtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaa 398  Q
    |||||||||||||||||||| | || |||||||||||| ||||||||| |||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaa 19213817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 22602710 - 22602751
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 29763130 - 29763187
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgt 351  Q
    |||||||||||||||||||| |||| ||||||||||   |||| ||||||||||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 640182 - 640134
Alignment:
Q  343 gtgtcgtgtccgacaccgacacatataattacactgcattttgtgattt 391  Q
    ||||||| || ||||||||||||||||||||||||| ||| ||||||||    
T  640182 gtgtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 7133213 - 7133285
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtc-gtgtccgacaccgacaca 365  Q
    |||||||||||||| |||||  ||| ||| ||||||| ||||| |||||| ||| ||||||||||||||||||    
T  7133213 tatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacaca 7133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 8842282 - 8842322
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtc 336  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtc 8842322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  298 aagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||||||||||| | |||| |||||||| || ||||| ||||||||| |||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 24105796 - 24105712
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    ||||||||||  |||||||| || | ||||||||||| ||||| ||||| ||| ||| ||||| ||||||| | |||||||||||    
T  24105796 tatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactg 24105712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 25791711 - 25791617
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||||||||||||||| |||| || ||| ||||| ||||| ||| | ||||| ||||| ||||||| | |||| ||||||||||| |||||||||    
T  25791711 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattagcggtgtcggcgtgtcag-tgtctgtgtccgtatccgtgcttcat 25791617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 3721158 - 3721111
Alignment:
Q  347 cgtgtccgacaccgacacatataattacactgcattttgtgattttct 394  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttct 3721111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 4795018 - 4794951
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccga 361  Q
    |||||||||| |||||| ||||||| || |||||    |||||||| |||||||||||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccga 4794951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 392
Target Start/End: Complemental strand, 8234245 - 8234166
Alignment:
Q  313 ttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||| ||||||||| | ||||| |||| |||||||||||||||||| ||| | ||| ||||||| ||| ||| |||||    
T  8234245 ttggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttatttt 8234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 17851488 - 17851445
Alignment:
Q  355 acaccgacacatataattacactgcattttgtgattttctaaaa 398  Q
    |||| ||||||||||||||||||| ||| |||||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaa 17851445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 17852118 - 17852056
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgac 356  Q
    |||||||||||||||||||| | || ||| ||||| | ||||| |||||||||| ||||||||    
T  17852118 tatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 35862069 - 35862027
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtc 336  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  35862069 tatgaagcacggacactcctcggattaggcgtgtcctcgtgtc 35862027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 1656721 - 1656676
Alignment:
Q  367 ataattacactgcattttgtgattttctaaaaaatttagctgtgtc 412  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||    
T  1656721 ataattacactgaattatgtgattttttaaaaaatttagttgtgtc 1656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 375
Target Start/End: Original strand, 3554447 - 3554528
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    |||||||||| ||||||| | | || || |||||| | |||| ||| | |||||||||||||||||||||  ||||||||||    
T  3554447 tatgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacatctataattaca 3554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 20545184 - 20545249
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    ||||||||||| ||||||||| | || |  |||||||||||||| |||| ||||||||| ||||||    
T  20545184 atatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgtacgacac 20545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 24146879 - 24146830
Alignment:
Q  349 tgtccgacaccgacacatataattacactgcattttgtgattttctaaaa 398  Q
    |||| |||||||||||||||||||| | || ||| |||||||||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttctaaaa 24146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 26033392 - 26033461
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| ||||||||||||| |||| ||| ||||| | || || |||||||||| |||| |||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 371
Target Start/End: Complemental strand, 41918975 - 41918906
Alignment:
Q  302 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataat 371  Q
    |||||||||||| |||||| ||| ||  ||||||||||||| || ||||| ||||| ||||| |||||||    
T  41918975 acggacactcctcggataatgcgggtttccgtgtcagacacttgccgtgttcgacaacgacatatataat 41918906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 2334378 - 2334314
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 358  Q
    |||||| ||||||||||||| |||| || |||||  | ||||| |||| ||||||||||||||||    
T  2334378 tatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 6490834 - 6490786
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    |||||||||||||||||||| |||| | ||||||||| ||||| |||||    
T  6490834 tatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 449
Target Start/End: Original strand, 7197237 - 7197392
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||| | || |||  | | || |||| ||||| |||| |||| ||||||||||||||||| | |||||||| || |||   |||||||    
T  7197237 atatgaagcacggacatttctcggaataagagtatcccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttt 7197336  T
Q  393 ctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
     | |||   ||||||||||| |||||| |  |||| |||| |||||| |||||||||    
T  7197337 tttaaattattagctgtgtcggcgtgt-caatgtctgtgttcgtatccgtgcttcat 7197392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 9933364 - 9933332
Alignment:
Q  332 gtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||| ||||||||||||||||||||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacac 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 10359717 - 10359633
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    ||||||||||||||||   | |||| || |||||| | ||||| |||||  ||||| ||||||| |||||| |||||||||||||    
T  10359717 tatgaagcacggacacctttcggattagacgtgtctcggtgtcggacacaagtcgtatccgacatcgacacctataattacactg 10359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 11738152 - 11738236
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    |||||| |||||||||||||  ||| ||||||||| | ||||   |||||| || | ||||||| |||||| |||||||||||||    
T  11738152 tatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgtctcatttccgacagcgacacgtataattacactg 11738236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 28155672 - 28155624
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacac 342  Q
    ||||||||||||||| ||||||||| ||||||||||  ||||| |||||    
T  28155672 tatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 449
Target Start/End: Complemental strand, 32308179 - 32308084
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgtatcagtgcttcat 449  Q
    |||||| |||||||| |||||||||| ||| ||||||||||| |||   ||||| ||||| |||||| | |||||| ||| |||||  |||||||||    
T  32308179 cgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt-cagtgtccatgttcgtatttgtgcttcat 32308084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 5926 - 6063
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtg-----------tccgacaccgacacatataattacactgcatt 382  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  383 ttgtgattttctaaaaaatttagctgtgtcagcgtgtc 420  Q
    |||||||||||||||||| |||| ||| || |||||||    
T  6026 ttgtgattttctaaaaaaattagatgtatcggcgtgtc 6063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 403 - 501
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||| |||||| |||||||||||||||||||| | ||||||||||| |||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgatttt 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 14645 - 14506
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||| ||||||||| ||| ||||||||| | ||||| |||||||||||||||||||||   ||| | ||||||||||| ||| |||||||||     
T  14645 tatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgattttt 14549  T
Q  394 taaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgt 436  Q
    | |||   |||| |||||| ||||||||||||||||| |||||    
T  14548 tcaaattattagttgtgtcggcgtgtccggtgtccgtatccgt 14506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 9957 - 9878
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtc 433  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||| ||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgt-cggtgtccatgtc 9878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||| |||||||||||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 45471 - 45555
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactg 378  Q
    ||||||||||| ||| || |||||| |||| |||| | ||||||||||||||||||||||||||||||||| | |||||||||||    
T  45471 tatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactg 45555  T

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Target: scaffold0050 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 70394 - 70298
Alignment:
Q  296 tgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgatttt 392  Q
    ||||||||| |||||| | |||| |||| |||||  ||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttatttt 70298  T

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Target: scaffold0053 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 8916 - 8833
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    ||||||||||||| ||||||  ||| ||||||||| | ||||| ||||||||||||||||||||||||||| | ||||||||||    
T  8916 tatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

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Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 241723 - 241653
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||| || |||| ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0793 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 4822 - 4922
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtcc--gacaccgacacatataattacactgcattttgtgattt 391  Q
    |||||||||||||||||||| |||| ||||||||||| ||||| |||| ||||||||| |  |||||| |||| | ||||||||||| ||| ||||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgattt 4921  T
Q  392 t 392  Q
    |    
T  4922 t 4922  T

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Target: scaffold0475 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 3426 - 3343
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacact 377  Q
    |||||||||||||||||||| |||| ||||||||||| |||||   |||||||| |||||||||| ||||| | ||||||||||    
T  3426 tatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacact 3343  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 8719 - 8649
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||| | |||| |||||    
T  8719 tatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacac 8649  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 71854 - 71784
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||| ||||||||| |||| || |||||||| ||||| ||||||||| |||||||||||||||||    
T  71854 tatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 92941 - 92875
Alignment:
Q  293 atatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacacc 359  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||| |||| |||||||||||||||||    
T  92941 atatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0512 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 375
Target Start/End: Original strand, 4977 - 5058
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattaca 375  Q
    |||||||||| ||||||||| |||| |||| |||| |  |||| ||||||||||||||||||||||||||| | ||||||||    
T  4977 tatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 8565 - 8635
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||||| | || |||||||| || ||||| ||||||| |||||||||| ||||||||    
T  8565 tatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0123 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 44529 - 44593
Alignment:
Q  357 accgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtcc 421  Q
    |||||||||||||||||||||| ||| ||||||||||| |||  |||||| |||||||| |||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtcc 44593  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 364
Target Start/End: Complemental strand, 53303 - 53239
Alignment:
Q  300 gcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||| ||||||| |  |||||||| ||||| |||||||||| ||||||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 394
Target Start/End: Complemental strand, 90961 - 90861
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttc 393  Q
    ||||||||||  |||||| |||||| ||||||||    ||||| ||||||||| ||||| |||| ||||| |||||||||||||| ||| | ||||||||    
T  90961 tatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttc 90862  T
Q  394 t 394  Q
    |    
T  90861 t 90861  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 3779 - 3849
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||| |||||||||| |||| ||||||||| |  |||| |||| ||||||||||||||||| ||||    
T  3779 tatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 3057 - 2987
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    |||| ||||||||||||||| |||| |||||||| || |||||  |||||||||||||| || ||||||||    
T  3057 tatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 9678 - 9747
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||||||||||||||| |||| |  ||||||||  ||||||||| |||||||||| |||||| ||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacac 9747  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 9747 - 9788
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||||| |||  ||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttct 9788  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 449
Target Start/End: Complemental strand, 17844 - 17737
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgacacatataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtccgta 437  Q
    ||||| ||||||||| |||||||||||||| |||||||| |  || ||||||||||| |||||  ||| ||||||   |||||| |||| ||||||||||    
T  17844 gacacatgtcgtgtctgacaccgacacatacaattacaccgagttgtgtgattttcttaaaaaactagttgtgtc--ggtgtcc-gtgt-cgtgtccgta 17749  T
Q  438 tcagtgcttcat 449  Q
    || |||||||||    
T  17748 tctgtgcttcat 17737  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 15089 - 15045
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcag 338  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  15089 tatgaagcacaaacactcctcggataaggcgtgtccccgtgtcag 15045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 1733 - 1683
Alignment:
Q  323 cgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacatataatta 373  Q
    |||||||  ||||| |||| |||||||||||||||||||||| ||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 1683  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 13542 - 13472
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||||| |||||||||||| |||| ||| || ||||  ||||  | ||||||||||||||||||||||||    
T  13542 tatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 51888 - 51785
Alignment:
Q  338 gacacgtgtcgtgtccgacaccgaca---catataattacactgcattttgtgattttctaaaaaatttagctgtgtcagcgtgtccggtgtccgtgtcc 434  Q
    ||||||| ||||||| ||||||||||   | | ||||||||||| ||| ||||||||| | |||   ||||||||||| |||||| | ||||||||||||    
T  51888 gacacgtatcgtgtctgacaccgacaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt-cagtgtccgtgtcc 51790  T
Q  435 gtatc 439  Q
    |||||    
T  51789 gtatc 51785  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 24154 - 24083
Alignment:
Q  294 tatgaagcacggacactccttggataaggcgtgtccccgtgtc--agacacgtgtcgtgtccgacaccgacac 364  Q
    |||||||||||||||||| | |||| |||||||| || |||||  | |||||||| |||||||||||||||||    
T  24154 tatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacac 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 135312 - 135353
Alignment:
Q  353 cgacaccgacacatataattacactgcattttgtgattttct 394  Q
    |||||||||||||||||||||||| | ||| |||||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttct 135353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  295 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 364  Q
    ||||| ||||||||||||| |||| |||||||||   || ||  |||||||||||||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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