View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18565_low_49 (Length: 233)
Name: NF18565_low_49
Description: NF18565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18565_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 38323969 - 38324165
Alignment:
| Q |
22 |
agtcatatacatagaattagttagtatagcacaagaatattaaattttgaattattcattaagtagctttcagtgagattgttgctagataccactaaat |
121 |
Q |
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| T |
38323969 |
agtcatatacatagaattagttagtatagcacaagaatattaaattttgaattattcattaagtagctttcagtgagattgttgctagataccactaaat |
38324068 |
T |
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| Q |
122 |
attctttgatattcatctatgtaagattatacatgattgagaatagcaagataggattttcctttagcatgtacaattcatttagactttgtttgtg |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38324069 |
attctttgatattcatctatgtaagattatacatgattgagaatagcaatataggattttcctttagcatgtacaattcatttagactttgtttgtg |
38324165 |
T |
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