View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18566_high_19 (Length: 213)
Name: NF18566_high_19
Description: NF18566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18566_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 14855992 - 14856174
Alignment:
| Q |
12 |
gaagaatatatatatgagtgagtgtgagtagttcttcaattcttctttcttgttattattatatttggtaaaatgttgtgcatgtcctatgcgttgaaat |
111 |
Q |
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| T |
14855992 |
gaagaatatatatatgagtgagtgtgagtagttcttcaattcttctttcttgttattattatatttggtaaaatgttgtgcatgtcctatgcgttgaaat |
14856091 |
T |
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| Q |
112 |
ttatatataattgagtcgtcatagttctatagagaaaaaacaataataattgagtttctcaatccaactactgttagggttag |
194 |
Q |
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| T |
14856092 |
ttatatataattgagtcgtcatagttctatagagaaaaaacaataataattgagtttctcaatccaactactgttagggttag |
14856174 |
T |
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