View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18566_low_21 (Length: 245)

Name: NF18566_low_21
Description: NF18566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18566_low_21
NF18566_low_21
[»] chr4 (31 HSPs)
chr4 (1-229)||(34526280-34526494)
chr4 (75-170)||(52700570-52700662)
chr4 (92-153)||(10796368-10796429)
chr4 (86-169)||(1374400-1374481)
chr4 (92-170)||(10794952-10795028)
chr4 (1-170)||(23297405-23297578)
chr4 (92-170)||(29877606-29877682)
chr4 (94-136)||(4603376-4603418)
chr4 (94-136)||(15184546-15184588)
chr4 (1-124)||(48686960-48687077)
chr4 (1-44)||(7148871-7148915)
chr4 (93-133)||(9201653-9201693)
chr4 (1-44)||(11256604-11256648)
chr4 (75-170)||(38345848-38345940)
chr4 (75-170)||(43699509-43699602)
chr4 (93-136)||(19298178-19298221)
chr4 (75-126)||(35010220-35010271)
chr4 (93-143)||(8130480-8130530)
chr4 (106-152)||(9319039-9319085)
chr4 (108-169)||(22273761-22273820)
chr4 (93-170)||(43415333-43415408)
chr4 (94-136)||(46176023-46176065)
chr4 (110-167)||(54593641-54593696)
chr4 (106-151)||(4331444-4331489)
chr4 (95-136)||(19414128-19414169)
chr4 (87-170)||(42611905-42611987)
chr4 (110-150)||(213008-213048)
chr4 (84-136)||(12495681-12495733)
chr4 (94-130)||(22303101-22303137)
chr4 (75-131)||(28074369-28074425)
chr4 (1-44)||(48667769-48667813)
[»] chr8 (24 HSPs)
chr8 (1-169)||(32131408-32131583)
chr8 (94-130)||(37410957-37410993)
chr8 (92-170)||(2019692-2019768)
chr8 (93-136)||(11988196-11988239)
chr8 (92-170)||(14942391-14942467)
chr8 (93-136)||(38195486-38195529)
chr8 (93-136)||(42102106-42102149)
chr8 (84-126)||(402123-402165)
chr8 (85-131)||(34286599-34286645)
chr8 (93-131)||(42363360-42363398)
chr8 (93-130)||(218296-218333)
chr8 (93-130)||(694856-694893)
chr8 (93-130)||(699065-699102)
chr8 (93-130)||(731919-731956)
chr8 (93-130)||(855815-855852)
chr8 (94-170)||(19925433-19925507)
chr8 (1-44)||(10213794-10213838)
chr8 (93-129)||(12607086-12607122)
chr8 (93-153)||(13131412-13131472)
chr8 (82-130)||(13265489-13265537)
chr8 (75-131)||(28879062-28879118)
chr8 (1-44)||(28879154-28879198)
chr8 (6-41)||(30974091-30974127)
chr8 (6-41)||(36907592-36907628)
[»] chr5 (29 HSPs)
chr5 (11-170)||(11163235-11163388)
chr5 (6-131)||(1943014-1943133)
chr5 (75-153)||(22201962-22202040)
chr5 (77-142)||(7984098-7984163)
chr5 (92-144)||(11991296-11991348)
chr5 (75-153)||(29922215-29922293)
chr5 (97-153)||(341972-342028)
chr5 (75-170)||(1372019-1372112)
chr5 (85-153)||(1473338-1473406)
chr5 (75-165)||(17128250-17128338)
chr5 (93-152)||(22573636-22573695)
chr5 (85-131)||(40697005-40697051)
chr5 (75-153)||(43318985-43319063)
chr5 (85-150)||(10537255-10537320)
chr5 (93-168)||(14243792-14243865)
chr5 (75-170)||(24030182-24030275)
chr5 (1-44)||(35083338-35083382)
chr5 (93-136)||(2531325-2531368)
chr5 (93-136)||(15122544-15122587)
chr5 (93-136)||(15709935-15709978)
chr5 (93-136)||(33757087-33757130)
chr5 (93-170)||(15413959-15414034)
chr5 (93-170)||(26002964-26003039)
chr5 (1-42)||(29136769-29136811)
chr5 (3-44)||(41059734-41059776)
chr5 (107-152)||(26003112-26003157)
chr5 (94-130)||(16722032-16722068)
chr5 (1-44)||(24030313-24030357)
chr5 (85-153)||(42852004-42852072)
[»] chr1 (20 HSPs)
chr1 (75-170)||(35897649-35897742)
chr1 (93-170)||(16225476-16225551)
chr1 (85-170)||(391135-391219)
chr1 (93-136)||(15791383-15791426)
chr1 (93-131)||(15235204-15235242)
chr1 (75-168)||(35590099-35590190)
chr1 (83-133)||(41003389-41003439)
chr1 (75-131)||(6337782-6337838)
chr1 (93-153)||(15631886-15631946)
chr1 (75-169)||(26946130-26946223)
chr1 (93-136)||(17348879-17348922)
chr1 (93-152)||(20169247-20169306)
chr1 (97-136)||(22088459-22088498)
chr1 (93-136)||(32497315-32497358)
chr1 (75-130)||(41576421-41576476)
chr1 (75-153)||(26435201-26435278)
chr1 (75-136)||(1565408-1565469)
chr1 (75-136)||(10082249-10082310)
chr1 (93-153)||(12256589-12256649)
chr1 (1-44)||(48819398-48819442)
[»] chr3 (21 HSPs)
chr3 (75-170)||(34707739-34707832)
chr3 (75-151)||(40581103-40581179)
chr3 (75-169)||(53218066-53218158)
chr3 (75-170)||(22809219-22809313)
chr3 (107-170)||(21296733-21296794)
chr3 (93-136)||(4257345-4257388)
chr3 (92-170)||(29270328-29270404)
chr3 (94-136)||(3645302-3645344)
chr3 (94-136)||(20894502-20894544)
chr3 (94-136)||(28623279-28623321)
chr3 (94-136)||(29614193-29614235)
chr3 (92-170)||(10272089-10272165)
chr3 (75-152)||(27769629-27769705)
chr3 (5-44)||(35127313-35127352)
chr3 (75-153)||(10448756-10448834)
chr3 (94-144)||(11528882-11528932)
chr3 (94-170)||(2086736-2086810)
chr3 (84-153)||(24842142-24842211)
chr3 (99-170)||(584987-585056)
chr3 (6-41)||(20174888-20174924)
chr3 (107-143)||(32901206-32901242)
[»] chr6 (19 HSPs)
chr6 (94-170)||(715970-716044)
chr6 (1-44)||(10755226-10755270)
chr6 (96-136)||(17300785-17300825)
chr6 (94-171)||(9582501-9582575)
chr6 (93-136)||(10184373-10184416)
chr6 (93-136)||(23314857-23314900)
chr6 (93-136)||(23325024-23325067)
chr6 (1-44)||(29623421-29623464)
chr6 (93-136)||(34223569-34223612)
chr6 (75-153)||(21891364-21891442)
chr6 (94-136)||(32615459-32615501)
chr6 (93-150)||(2040230-2040287)
chr6 (106-170)||(7267896-7267958)
chr6 (95-131)||(1468180-1468216)
chr6 (75-131)||(2034255-2034311)
chr6 (1-44)||(3210932-3210976)
chr6 (75-170)||(24625818-24625911)
chr6 (94-130)||(32165305-32165341)
chr6 (1-44)||(35071371-35071415)
[»] chr7 (21 HSPs)
chr7 (75-170)||(30181517-30181610)
chr7 (93-152)||(12473189-12473248)
chr7 (76-170)||(38372525-38372617)
chr7 (75-153)||(22032744-22032822)
chr7 (102-170)||(26331778-26331844)
chr7 (93-153)||(21249138-21249198)
chr7 (1-44)||(30181649-30181693)
chr7 (93-136)||(991499-991542)
chr7 (93-136)||(21027557-21027600)
chr7 (97-136)||(35246671-35246710)
chr7 (73-136)||(41677373-41677436)
chr7 (1-75)||(14691242-14691313)
chr7 (93-170)||(22575553-22575628)
chr7 (94-136)||(25536277-25536319)
chr7 (94-136)||(28004583-28004625)
chr7 (93-131)||(42083461-42083499)
chr7 (75-136)||(34922930-34922991)
chr7 (1-44)||(1401172-1401216)
chr7 (93-153)||(16958798-16958858)
chr7 (1-40)||(29390494-29390534)
chr7 (75-170)||(29390576-29390669)
[»] chr2 (20 HSPs)
chr2 (75-170)||(33321429-33321522)
chr2 (99-153)||(29774727-29774781)
chr2 (94-136)||(32522090-32522132)
chr2 (85-153)||(2790106-2790175)
chr2 (75-152)||(33321338-33321415)
chr2 (93-133)||(32366152-32366192)
chr2 (93-136)||(446451-446494)
chr2 (92-170)||(735886-735962)
chr2 (1-43)||(4533422-4533465)
chr2 (93-136)||(40301351-40301394)
chr2 (76-170)||(38215990-38216078)
chr2 (92-153)||(27703501-27703562)
chr2 (93-150)||(34913434-34913491)
chr2 (108-152)||(1768753-1768797)
chr2 (93-172)||(2757114-2757190)
chr2 (1-44)||(4027024-4027068)
chr2 (93-133)||(19683576-19683616)
chr2 (92-152)||(21788440-21788500)
chr2 (107-151)||(26440208-26440252)
chr2 (100-128)||(31165028-31165056)
[»] scaffold0012 (1 HSPs)
scaffold0012 (93-136)||(178499-178542)
[»] scaffold0157 (1 HSPs)
scaffold0157 (84-136)||(24744-24796)
[»] scaffold0100 (1 HSPs)
scaffold0100 (94-130)||(38497-38533)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-44)||(48571-48615)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 34526280 - 34526494
Alignment:
Q  1 atagtttatgcaaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcataataaacaactttgacaggcttataa 99  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34526280 atagtttatgcaaataaataagcttttatgttaattcataagttc----tcactatggaaaattgtatcttcataataaacaactttgacaggcttataa 34526375  T
Q  100 ataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaactgaaaacacaagaaaagatgaatacctct 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||    
T  34526376 ataatgcataaaaacttatttatttacataagttgttatgcataacct-----------gtcaatccaaactgaaaacacaagaaaagatgaatacctct 34526464  T
Q  200 gcgaaaagcgggaattgaattagaagtaat 229  Q
    ||||||||||||||||||||||||||||||    
T  34526465 gcgaaaagcgggaattgaattagaagtaat 34526494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 52700570 - 52700662
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| ||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||| |||  ||||||||||||||||    
T  52700570 ataaaccacttttacaagcttataaataatacataaagacttatttatttacataagttgtt-tgcataagctctaaa--ataagtcaatccaaac 52700662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 10796429 - 10796368
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||| |||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||    
T  10796429 gcttttaaataatacataaaaacttatttatttacacaagttgttttgcataagctctaaaa 10796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 1374400 - 1374481
Alignment:
Q  86 tgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaa 169  Q
    ||||| |||||| ||| |||||||||||||| ||||||| |||||||| || ||||||| |||||||  ||||| |||||||||    
T  1374400 tgacaagcttatgaatcatgcataaaaacttttttatttgcataagtttttttgcataagctcaaaa--ataagccaatccaaa 1374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 10794952 - 10795028
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||| |||||||| |||||||||||||||||||||| ||| |||| ||||||| ||| |||  |||||||||| |||||    
T  10794952 gcttttaaataatacataaaaacttatttatttacacaagctgttttgcataagctctaaa--ataagtcaattcaaac 10795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 23297578 - 23297405
Alignment:
Q  1 atagtttatgcaaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcataa---------taaacaactttgaca 90  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||    || |||   |||||| |||||||||||         ||||| || ||||||    
T  23297578 atagcttatgcaaataaataagcttttatgctaattcataagttc----tcgctaacaaaaattgtatcttcataagctgtttcataaactaccttgaca 23297483  T
Q  91 ggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
      ||||| |||||| ||||||| ||||||||||| |||||| | || ||||||| |||||||  ||||| ||||||||||    
T  23297482 aacttatgaataatacataaaagcttatttatttgcataagctattttgcataagctcaaaa--ataagccaatccaaac 23297405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 29877682 - 29877606
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||||| ||||||| ||||||||||| ||||| ||||| ||||||| |||||||  ||||| ||||||||||    
T  29877682 gcttatgaataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaa--ataagccaatccaaac 29877606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 4603376 - 4603418
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  4603376 ttataaataatacataaaaacttatttatttgcataagttgtt 4603418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 15184588 - 15184546
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  15184588 ttataaataatacataaaaacttatttatttacataagctgtt 15184546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 48687077 - 48686960
Alignment:
Q  1 atagtttatgcaaataaataagctt-tatgctaattcataagttcgttctcactatggaaaattatatcttcataataaacaactttgacaggcttataa 99  Q
    |||| |||||||||||||||| ||| |||| ||||||||||||||    ||||||  ||||||| |||||| ||||   || || |||||| |||||| |    
T  48687077 atagcttatgcaaataaataaacttatatgttaattcataagttc----tcactaatgaaaattgtatctttataa---actacgttgacaagcttatga 48686985  T
Q  100 ataatgcataaaaacttatttattt 124  Q
    ||| | |||||||||||||||||||    
T  48686984 atagtacataaaaacttatttattt 48686960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7148915 - 7148871
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  7148915 atagcttatgcaaataaataagcttttatgctaattcataagttc 7148871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 9201693 - 9201653
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagtt 133  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  9201693 cttataaataatacataaaaacttatttatttgcataagtt 9201653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11256604 - 11256648
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  11256604 atagtttatgcaaataaataagcttttatgttaattcataagttc 11256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 38345848 - 38345940
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||||||||  ||||| |||| | ||||||| |||||||||||  ||||| |||| ||||||| |||  ||||||||||||||||||||    
T  38345848 ataaactactttgacaa-cttatgaatactacataaaagcttatttatttggataagctgttttgcataagctc--aaacataagtcaatccaaac 38345940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 43699509 - 43699602
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || |||||| |||||| |||||  ||||||| |||||||||||  |||||||||| | ||||| |||||||  ||||| ||||||||||    
T  43699509 ataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataagttgtttttcataagctcaaaa--ataagccaatccaaac 43699602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 19298178 - 19298221
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| |||||||| |||||||||| |||||||||||    
T  19298178 cttataaataatacataaaaatttatttatttgcataagttgtt 19298221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 35010271 - 35010220
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttac 126  Q
    |||||| || ||||||  |||||||||||| |||||||||||||||||||||    
T  35010271 ataaactacgttgacaaacttataaataatacataaaaacttatttatttac 35010220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 8130530 - 8130480
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcata 143  Q
    ||||| |||||||||||||| ||||||||||| |||||| |||| ||||||    
T  8130530 cttatgaataatgcataaaagcttatttatttgcataagctgttttgcata 8130480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 9319085 - 9319039
Alignment:
Q  106 cataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||||    
T  9319085 cataaaaacttatttatttgtataagttgttttgcataagctcaaaa 9319039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 22273820 - 22273761
Alignment:
Q  108 taaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaa 169  Q
    ||||| ||||||||||| |||||| | |||||||||| |||||||  |||||||||||||||    
T  22273820 taaaagcttatttatttgcataagctattatgcataagctcaaaa--ataagtcaatccaaa 22273761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 43415333 - 43415408
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||| |||||| ||||||||||||||||||| || |||||||| | | ||| |||||||  |||||||||| |||||    
T  43415333 cttatgaataatacataaaaacttatttatttgcagaagttgttttacttaagctcaaaa--ataagtcaattcaaac 43415408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 46176023 - 46176065
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  46176023 ttataaataatacataaaaacttatttatttgcataagctgtt 46176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 54593641 - 54593696
Alignment:
Q  110 aaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatcca 167  Q
    |||||||||||||| |||||||||||| | ||||| |||||||  |||||||||||||    
T  54593641 aaaacttatttattaacataagttgtttttcataagctcaaaa--ataagtcaatcca 54593696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 4331444 - 4331489
Alignment:
Q  106 cataaaaacttatttatttacataagttgttatgcataacctcaaa 151  Q
    |||||||||||||||||||||||||||| || | ||||| ||||||    
T  4331444 cataaaaacttatttatttacataagttatttttcataaactcaaa 4331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 19414169 - 19414128
Alignment:
Q  95 tataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||| ||||||||||||||||||| |||||| ||||    
T  19414169 tataaataatacataaaaacttatttatttgcataagctgtt 19414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 42611905 - 42611987
Alignment:
Q  87 gacaggcttataaataatgcataaaaa-cttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||| |||||| |||||| |||| ||| ||||||||||| ||||||||||| ||||||| ||  |||| ||||| ||||||||||    
T  42611905 gacaagcttatgaataatacatataaagcttatttatttgcataagttgttttgcataagct--aaaaaataagccaatccaaac 42611987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 213008 - 213048
Alignment:
Q  110 aaaacttatttatttacataagttgttatgcataacctcaa 150  Q
    ||||||||||||||| ||||||||||| ||||||| |||||    
T  213008 aaaacttatttatttgcataagttgttttgcataagctcaa 213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 12495681 - 12495733
Alignment:
Q  84 tttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||| |||||| |||||| ||||||| ||||||||||| |||||| ||||    
T  12495681 tttgacaagcttatgaataatacataaaagcttatttatttgcataagctgtt 12495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 22303137 - 22303101
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  22303137 ttataaataatacataaaaacttatttatttgcataa 22303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 28074425 - 28074369
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| || |||||| |||||| |||||| ||||||| ||||||||||| ||||||    
T  28074425 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48667813 - 48667769
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  48667813 atagcttatgcaaataaataagcttttatgttaattcataagttc 48667769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32131583 - 32131408
Alignment:
Q  1 atagtttatgcaaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcata------------ataaacaactttg 87  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||    ||||||| ||||||| ||||||||||            |||||| || |||    
T  32131583 atagtttatgcaaatagataagcttttatgttaattcataagttc----tcactattgaaaattgtatcttcataggttgtttattcataaactaccttg 32131488  T
Q  88 acaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaa 169  Q
    |||  ||||  |||||||||||||| ||||||||||| |||||| |||| ||||||| |||||||  |||||||||||||||    
T  32131487 acaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgcataagctcaaaa--ataagtcaatccaaa 32131408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 37410957 - 37410993
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37410957 ttataaataatacataaaaacttatttatttacataa 37410993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Original strand, 2019692 - 2019768
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||| |||||||| |||||  |||||||||||| |||||| |||| ||||||| ||| |||  ||||||||||||||||    
T  2019692 gcttgtaaataatacataatgacttatttatttgcataagatgttttgcataagctctaaa--ataagtcaatccaaac 2019768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 11988239 - 11988196
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||    
T  11988239 cttataaataatacataaaaacttatttatttgcataaattgtt 11988196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 14942467 - 14942391
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| | ||||| ||| |||  ||||| ||||||||||    
T  14942467 gcttataaataatacacaaaagcttatttatatacataagttgttttacataagctctaaa--ataagccaatccaaac 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 38195529 - 38195486
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  38195529 cttataaataatatataaaaacttatttatttgcataagttgtt 38195486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 42102149 - 42102106
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||    
T  42102149 cttataaataatacataaaaacttatttatttgcataagctgtt 42102106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 402123 - 402165
Alignment:
Q  84 tttgacaggcttataaataatgcataaaaacttatttatttac 126  Q
    |||||||  |||||||||||| |||||||||||||||||||||    
T  402123 tttgacaaacttataaataatacataaaaacttatttatttac 402165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 34286599 - 34286645
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  34286599 ttgacaagcttatgaataatacataaaagcttatttatttacataag 34286645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 42363360 - 42363398
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  42363360 cttataaataatacataaaaacttatttatttgcataag 42363398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 218296 - 218333
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataa 130  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  218296 cttataaataatacataaaaatttatttatttacataa 218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 694856 - 694893
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataa 130  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  694856 cttataaataatacataaaaatttatttatttacataa 694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 699065 - 699102
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataa 130  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  699065 cttataaataatacataaaaatttatttatttacataa 699102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 731919 - 731956
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataa 130  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  731919 cttataaataatacataaaaatttatttatttacataa 731956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 855815 - 855852
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataa 130  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  855815 cttataaataatacataaaaatttatttatttacataa 855852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 19925433 - 19925507
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||||||| ||| ||  ||||||||||| |||||  |||||||||||| ||| |||  ||||||||||||||||    
T  19925433 ttataaataatacattaatgcttatttatttgcataaactgttatgcataagctctaaa--ataagtcaatccaaac 19925507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10213838 - 10213794
Alignment:
Q  1 atagtttatgcaaataaataagctt-tatgctaattcataagttc 44  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||    
T  10213838 atagcttatgcaaataaataagcttgtatgttaattcataagttc 10213794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 12607122 - 12607086
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacata 129  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  12607122 cttataaataatacataaaaacttatttatttgcata 12607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 13131472 - 13131412
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    ||||| |||||| ||||||| ||||||||||| ||||| ||||| ||||||| || |||||    
T  13131472 cttatgaataatacataaaagcttatttatttgcataatttgttttgcataagctaaaaaa 13131412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 13265537 - 13265489
Alignment:
Q  82 actttgacaggcttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||| |||||| |||||| ||||||| ||||||||||| |||||    
T  13265537 actttgacaagcttatgaataatacataaaagcttatttatttgcataa 13265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 28879118 - 28879062
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| || |||||| |||||| |||||| ||||||| ||||||||||| ||||||    
T  28879118 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28879198 - 28879154
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  28879198 atagcttatgcaaataaataagcttttatgttaattcataagttc 28879154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 30974127 - 30974091
Alignment:
Q  6 ttatgcaaataaataagc-tttatgctaattcataag 41  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30974127 ttatgcaaataaataagcttttatgctaattcataag 30974091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 36907592 - 36907628
Alignment:
Q  6 ttatgcaaataaataagc-tttatgctaattcataag 41  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36907592 ttatgcaaataaataagcttttatgctaattcataag 36907628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 11163235 - 11163388
Alignment:
Q  11 caaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcataataaacaactttgacaggcttataaataatgcata 109  Q
    |||||||||||||||| ||| |||||||||||||||    |||||  ||||||| ||||||  | |||||| || | |||| |||||| ||| || ||||    
T  11163235 caaataaataagcttttatgttaattcataagttcg----cactaacgaaaattgtatcttt-tcataaactacctcgacaagcttatgaatcatacata 11163329  T
Q  110 aaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||||||| ||||||||||| |||| ||||||| ||  |||| ||||||||||||||||    
T  11163330 aaaacttattgatttacataagctgttttgcataagct--aaaaaataagtcaatccaaac 11163388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 1943133 - 1943014
Alignment:
Q  6 ttatgcaaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcataataaacaactttgacaggcttataaataat 104  Q
    ||||||||||||||||||||| ||||||||||||||||||    ||||||  ||||||| |||||||||||   || || |||||| ||||||  |||||    
T  1943133 ttatgcaaataaataagcttttatgctaattcataagttc----tcactaatgaaaattgtatcttcataa---actaccttgacaagcttatggataat 1943041  T
Q  105 gcataaaaacttatttatttacataag 131  Q
     |||||||||||||||| || ||||||    
T  1943040 acataaaaacttatttacttgcataag 1943014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 22201962 - 22202040
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || |||||| |||||| |||||| ||||||| |||||||||||||||||| |||| ||||||| ||||||||    
T  22201962 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagctgttttgcataagctcaaaaa 22202040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 7984163 - 7984098
Alignment:
Q  77 aaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcat 142  Q
    ||||||||||||||  ||||| |||||| |||||||||||| |||||| |||||||||||||||||    
T  7984163 aaacaactttgacaaacttatgaataatacataaaaacttagttatttgcataagttgttatgcat 7984098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 11991348 - 11991296
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataa 144  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  11991348 gcttataaataatacataaaagcttatttatttacataagttgttttgcataa 11991296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 29922215 - 29922293
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || |||||| |||||| |||||| ||||||||||||||||||| |||||  |||| ||||||| ||||||||    
T  29922215 ataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataaactgttttgcataagctcaaaaa 29922293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 342028 - 341972
Alignment:
Q  97 taaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||||| ||||||||||||||||||||||| ||||| | ||||||| ||||||||    
T  342028 taaataatacataaaaacttatttatttacatgagttgctttgcataagctcaaaaa 341972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 1372019 - 1372112
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || || ||| ||||||||||||| |||||||   |||||||||||||||  |||| ||||||| |||||||  ||||||||||||||||    
T  1372019 ataaaccacatttacaagcttataaataatacataaaagtgtatttatttacataaactgttttgcataagctcaaaa--ataagtcaatccaaac 1372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 1473406 - 1473338
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| |||||| |||||| ||||||| ||||||||||| ||||||||||| || |||| ||||||||    
T  1473406 ttgacaagcttatgaataatacataaaagcttatttatttgcataagttgttctgtataagctcaaaaa 1473338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 17128338 - 17128250
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatc 165  Q
    |||||| ||||||| | | |||| |||||| ||||||| ||||||||||| |||||| |||| ||||||| |||||||  |||||||||||    
T  17128338 ataaactactttgataagtttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaa--ataagtcaatc 17128250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 22573695 - 22573636
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||||||| |||||||    
T  22573695 cttataaataatacaaaaaaactcatttatttgcataagttgttttgcataagctcaaaa 22573636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 40697051 - 40697005
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  40697051 ttgacaagcttataaataatacataaaaacttatttatttgcataag 40697005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 43319063 - 43318985
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || || ||| ||||||||||||| |||||| || ||||||||| ||||||||||| ||||||| ||| ||||    
T  43319063 ataaactacattaacaagcttataaataatacataaagacatatttatttgcataagttgttttgcataagctctaaaa 43318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 10537255 - 10537320
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaa 150  Q
    |||||| ||||||||||||| ||||||| ||||||||||| |||||| |||| | ||||| |||||    
T  10537255 ttgacaagcttataaataatacataaaagcttatttatttgcataagctgttttacataagctcaa 10537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 14243865 - 14243792
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaa 168  Q
    ||||| |||| | |||| || |||||||||||||||||| |||| ||||||| |||||||  ||||||||||||||    
T  14243865 cttatgaatattacatagaagcttatttatttacataagctgttttgcataatctcaaaa--ataagtcaatccaa 14243792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 24030275 - 24030182
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| ||||||||| |||||| |||||| ||||||| |||||||||||  ||||| |||| || |||| || ||||  |||||||| |||||||    
T  24030275 ataaactactttgacaagcttatgaataatacataaaagcttatttatttggataagctgttttgtataagcttaaaa--ataagtcattccaaac 24030182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35083382 - 35083338
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  35083382 atagtttatgcaaataaataagcttttatgttaattcataagttc 35083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 2531368 - 2531325
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||    
T  2531368 cttataaataatacataacaacttatttatttgcataagttgtt 2531325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 15122587 - 15122544
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||    
T  15122587 cttataaataatacataaaaacttatttctttgcataagttgtt 15122544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 15709935 - 15709978
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| || |||||||||||||||| |||||||||||    
T  15709935 cttataaataatacagaaaaacttatttatttgcataagttgtt 15709978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 33757130 - 33757087
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||    
T  33757130 cttataaataatacataaaaacttatttatttgcataagctgtt 33757087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 15414034 - 15413959
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||| |||||| ||| || |||||||||||| |||||| |||| ||||||| ||| |||  ||||||||||||||||    
T  15414034 cttatcaataatacattaatacttatttatttgcataagctgttttgcataagctctaaa--ataagtcaatccaaac 15413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 26003039 - 26002964
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||||||||| ||||||||||||||||||| |||||  |||| || |||| ||| |||  |||||| |||||||||    
T  26003039 cttataaataatacataaaaacttatttatttgcataaactgttttgtataagctctaaa--ataagttaatccaaac 26002964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29136769 - 29136811
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagt 42  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  29136769 atagtttatgcaaataaataagcttttatgttaattcataagt 29136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41059734 - 41059776
Alignment:
Q  3 agtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  41059734 agtttatgcaaataaataagcttttatgttaattcataagttc 41059776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 26003112 - 26003157
Alignment:
Q  107 ataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    ||||||||||||||||||||||||||| || | ||||| |||||||    
T  26003112 ataaaaacttatttatttacataagttatttttcataagctcaaaa 26003157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 16722068 - 16722032
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  16722068 ttataaataatacataaaaacttatttatttgcataa 16722032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24030357 - 24030313
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  24030357 atagcttatgcaaataaataagcttttatgttaattcataagttc 24030313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 42852072 - 42852004
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| |||||| |||||| ||||||| |||||||||||  ||||| |||| ||||||| | ||||||    
T  42852072 ttgacaagcttatgaataatacataaaagcttatttatttgaataagctgttttgcataagcccaaaaa 42852004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 35897649 - 35897742
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| ||||||| | |||||| ||||||  |||||||||||||||||| ||||||||||| |||||||||| ||||  |||| |||||||||||    
T  35897649 ataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataagttgttttgcataaccttaaaa--ataaatcaatccaaac 35897742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 16225551 - 16225476
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||| |||| |||||||||||||||||||||||||  |||| ||||||| ||| |||  ||||||||||||||||    
T  16225551 cttataattaatacataaaaacttatttatttacataaactgttttgcataagctctaaa--ataagtcaatccaaac 16225476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 391219 - 391135
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaa-cttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||||| ||||||  ||||||| ||||||||||| |||||| |||| |||||||||||||||  ||||| ||||||||||    
T  391219 ttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaa--ataagccaatccaaac 391135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 15791426 - 15791383
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  15791426 cttataaataatacataaaaacttatttatttacataagctgtt 15791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 15235204 - 15235242
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15235204 cttataaataatacataaaaacttatttatttacataag 15235242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 35590190 - 35590099
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaa 168  Q
    ||||||||| |||||| |||||| ||  || ||||||| ||||||||||| ||||||||||| | ||||| ||  |||| ||||||||||||||    
T  35590190 ataaacaaccttgacaagcttatgaactatacataaaagcttatttatttgcataagttgttttacataagct--aaaaaataagtcaatccaa 35590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 41003439 - 41003389
Alignment:
Q  83 ctttgacaggcttataaataatgcataaaaacttatttatttacataagtt 133  Q
    ||||||||  |||||||||||| ||||||||||||||||||| ||||||||    
T  41003439 ctttgacaaacttataaataatacataaaaacttatttatttgcataagtt 41003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 6337782 - 6337838
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| || |||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  6337782 ataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataag 6337838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 15631946 - 15631886
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||||||||| |||||||||||||||||||  |||||||||| || |||| ||| ||||    
T  15631946 cttataaataatacataaaaacttatttatttgtataagttgttttgtataagctctaaaa 15631886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 26946130 - 26946223
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaa-cttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaa 169  Q
    |||||| || || ||| |||||| |||||  |||||||| ||||||||||||||||||  ||| ||||||| |||||||  |||||||||||||||    
T  26946130 ataaactaccttaacaagcttatgaataacacataaaaagcttatttatttacataagccgttttgcataagctcaaaa--ataagtcaatccaaa 26946223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 17348922 - 17348879
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  17348922 cttataaataatagataaaaacttatttatttgcataagttgtt 17348879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 20169306 - 20169247
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||| | ||||| |||||||    
T  20169306 cttataaataatacataaaagcttatttatttgcataagctgtttttcataagctcaaaa 20169247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 22088459 - 22088498
Alignment:
Q  97 taaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  22088459 taaataatacataaaaacttatttatttacataagctgtt 22088498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 32497315 - 32497358
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||    
T  32497315 cttataaataatacataaaaacttatttatttgcataagctgtt 32497358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 41576421 - 41576476
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||| || ||| ||||||||||| | |||||||| ||||||||||||||||    
T  41576421 ataaacaacatttacaagcttataaatagtacataaaaaattatttatttacataa 41576476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 26435201 - 26435278
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| |||||||||  |||| ||||||| ||||||| ||||||||||| |||||| |||| || |||| ||||||||    
T  26435201 ataaactactttgacaaacttaaaaataatacataaaa-cttatttatttgcataagctgttttgtataagctcaaaaa 26435278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 1565408 - 1565469
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||| || |||||| |||||  |||||||||||||| ||| |||||||||||||| ||||    
T  1565408 ataaactaccttgacaagcttacgaataatgcataaaagcttgtttatttacataagctgtt 1565469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 10082310 - 10082249
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||| || ||||||  ||||| |||||  ||||||||||||||||||| |||||||||||    
T  10082310 ataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcataagttgtt 10082249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 12256649 - 12256589
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    ||||||||||||  |||||| | || |||||||||||||||||| ||||||| ||| ||||    
T  12256649 cttataaataatatataaaagcataattatttacataagttgttttgcataagctctaaaa 12256589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48819442 - 48819398
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  48819442 atagcttatgcaaataaataagcttttatgttaattcataagttc 48819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 34707739 - 34707832
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || || ||| |||||| |||||| ||||||| ||||| ||||||| ||||||||| ||||||| ||||||||  |||||||||||||||    
T  34707739 ataaactaccttaacaagcttatgaataatacataaaagcttatatatttacgtaagttgttttgcataagctcaaaaa--taagtcaatccaaac 34707832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 40581103 - 40581179
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaa 151  Q
    |||||| || |||||| |||||| |||||| ||||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  40581103 ataaactaccttgacaagcttattaataatacataaaagcttatttatttgcataagttgttttgcataagctcaaa 40581179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 53218066 - 53218158
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaa 169  Q
    |||||| || |||||| |||||| |||||| ||||||| ||||||||||  ||||||||||| ||||||| ||  |||| |||||||||||||||    
T  53218066 ataaactaccttgacaagcttatgaataatacataaaatcttatttattcgcataagttgttttgcataagct--aaaaaataagtcaatccaaa 53218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 22809219 - 22809313
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaa-cttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || |||||| |||||| ||||||  ||||||| ||||||||||| |||||| |||| |||||||||||||||  |||||||||| |||||    
T  22809219 ataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaa--ataagtcaattcaaac 22809313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 21296794 - 21296733
Alignment:
Q  107 ataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||||||||||||||| ||||| ||||| ||||||| |||||||  ||||||||||||||||    
T  21296794 ataaaaacttatttatttgcataaattgttttgcataatctcaaaa--ataagtcaatccaaac 21296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 4257345 - 4257388
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  4257345 cttataaataatacataaaaacttatttatttgcataagttgtt 4257388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 29270404 - 29270328
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||||| ||||||| ||||||||||   |||||||||| ||||||| ||||||||  |||||||||||||||    
T  29270404 gcttatgaataatacataaaagcttatttattcctataagttgttttgcataagctcaaaaa--taagtcaatccaaac 29270328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 3645344 - 3645302
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  3645344 ttataaataatacataaaaacttatttatttacataagctgtt 3645302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 20894544 - 20894502
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  20894544 ttataaataatacataaaaacttatttatttacataagctgtt 20894502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 28623279 - 28623321
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  28623279 ttataaataatacataaaaacttatttatttgcataagttgtt 28623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 29614235 - 29614193
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  29614235 ttataaataatacataaaaacttatttatttacataagctgtt 29614193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 10272165 - 10272089
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||||| |||||||  |||||||||| ||| ||||||| ||||||| || |||||  |||||||||||||||    
T  10272165 gcttatgaataatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaaa--taagtcaatccaaac 10272089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 27769705 - 27769629
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaactt-atttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||| || |||||| |||||||||||||  ||||||| || |||||||| ||||||||||| ||||||| |||||||    
T  27769705 ataaactacattgacaagcttataaataat--ataaaaagttcatttatttgcataagttgttttgcataaactcaaaa 27769629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 35127352 - 35127313
Alignment:
Q  5 tttatgcaaataaataagctttatgctaattcataagttc 44  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  35127352 tttatgcaaataaataagctttatgttaatttataagttc 35127313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 10448834 - 10448756
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || || ||| ||||||||||||| ||||||  | ||||||||| ||||||||||| ||||||| ||| ||||    
T  10448834 ataaactacattaacaagcttataaataatacataaaggcatatttatttgcataagttgttttgcataagctctaaaa 10448756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 11528932 - 11528882
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgttatgcataa 144  Q
    |||| |||||| ||||||| |||||||| |||||||||||||| |||||||    
T  11528932 ttatgaataatacataaaagcttatttacttacataagttgttttgcataa 11528882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 2086736 - 2086810
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||  |||||| ||| |||  ||||| ||||||||||    
T  2086736 ttataaataatacataaaagtttatttatttacataagctgtttagcataagctctaaa--ataagccaatccaaac 2086810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 24842142 - 24842211
Alignment:
Q  84 tttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||||  ||||| |||||| |||||||| |||||||||| ||||||||||| |  ||||||| |||||    
T  24842142 tttgacaaacttatgaataatacataaaaatttatttatttgcataagttgttttttataaccttaaaaa 24842211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 585056 - 584987
Alignment:
Q  99 aataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||||||||||| ||||||||||| |||||  |||| | ||||| || ||||  ||||||||||||||||    
T  585056 aataatgcataaaagcttatttatttgcataatgtgttttacataagctgaaaa--ataagtcaatccaaac 584987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 20174888 - 20174924
Alignment:
Q  6 ttatgcaaataaataagc-tttatgctaattcataag 41  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20174888 ttatgcaaataaataagcttttatgctaattcataag 20174924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 32901206 - 32901242
Alignment:
Q  107 ataaaaacttatttatttacataagttgttatgcata 143  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  32901206 ataaaagcttatttatttacataagttgttttgcata 32901242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 715970 - 716044
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||||||| |||| |||||||||||||||||||||||| | ||||||| ||  |||  ||||||||||||||||    
T  715970 ttataaataatacatagaaacttatttatttacataagttgatttgcataagctttaaa--ataagtcaatccaaac 716044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10755226 - 10755270
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  10755226 atagtttatgcaaataaataagcttttatgttaattcataagttc 10755270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 17300785 - 17300825
Alignment:
Q  96 ataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  17300785 ataaataatacataaaaacttatttatttgcataagttgtt 17300825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 9582501 - 9582575
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaact 171  Q
    ||||||||||| |||||||| |||||||||| |||||||| || ||||||| ||   ||| ||| |||||||||||||    
T  9582501 ttataaataatacataaaaatttatttatttgcataagttattctgcataagct---aaaaatatgtcaatccaaact 9582575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 10184373 - 10184416
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||    
T  10184373 cttataaataatagataaaaacttatttatttacataagctgtt 10184416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 23314857 - 23314900
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||    
T  23314857 cttataaataacgcataaaaacttatttatttgcataagctgtt 23314900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 23325024 - 23325067
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||    
T  23325024 cttataaataacgcataaaaacttatttatttgcataagctgtt 23325067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29623421 - 29623464
Alignment:
Q  1 atagtttatgcaaataaataagctttatgctaattcataagttc 44  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||    
T  29623421 atagcttatgcaaataaataagatttatgttaattcataagttc 29623464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 34223569 - 34223612
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||  ||||||||||||||||||| |||||||||||    
T  34223569 cttataaataacacataaaaacttatttattttcataagttgtt 34223612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 21891364 - 21891442
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || |||||| |||||| ||||||  || ||||||||||||||| |||||| | || ||||||| ||||||||    
T  21891364 ataaactacattgacaagcttatgaataatatatcaaaacttatttatttgcataagctattctgcataagctcaaaaa 21891442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 32615459 - 32615501
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  32615459 ttataaataatacataaaaacttatttatttgcataagctgtt 32615501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 2040230 - 2040287
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaa 150  Q
    ||||| ||||||  |||||| |||||||||||| |||||||||| ||||||| |||||    
T  2040230 cttatgaataataaataaaagcttatttatttatataagttgttttgcataagctcaa 2040287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 7267896 - 7267958
Alignment:
Q  106 cataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||| ||||||||||| ||||||||||||| ||||| || ||||  ||||| ||||||||||    
T  7267896 cataaaagcttatttatttgcataagttgttattcataagcttaaaa--ataagccaatccaaac 7267958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 1468216 - 1468180
Alignment:
Q  95 tataaataatgcataaaaacttatttatttacataag 131  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  1468216 tataaataatacataaaaacttatttatttgcataag 1468180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 2034255 - 2034311
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataag 131  Q
    |||||| || ||||||  |||||||||||| ||||||| ||||||||||| ||||||    
T  2034255 ataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataag 2034311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3210932 - 3210976
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  3210932 atagcttatgcaaataaataagcttttatgttaattcataagttc 3210976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 24625911 - 24625818
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || || ||| |||||| |||||| ||||||| | ||||||||| |||| |||||  ||| |||||||||||  ||||| ||||||||||    
T  24625911 ataaactaccttaacaagcttatgaataatacataaaagcgtatttatttgcatatgttgtcttgcctaacctcaaaa--ataagacaatccaaac 24625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 32165305 - 32165341
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  32165305 ttataaataatacataaaaacttatttattttcataa 32165341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35071371 - 35071415
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  35071371 atagcttatgcaaataaataagcttttatgttaattcataagttc 35071415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 170
Target Start/End: Complemental strand, 30181610 - 30181517
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || |||||| |||||| |||||| ||||||| ||| ||||||| | ||||||||  ||||||| ||||||||  |||||||||||||||    
T  30181610 ataaactaccttgacaagcttatgaataatacataaaagcttctttatttgcctaagttgtattgcataagctcaaaaa--taagtcaatccaaac 30181517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 12473248 - 12473189
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    ||||| |||||| ||||||||||||||| ||| ||||||||||| ||||||| |||||||    
T  12473248 cttatgaataatacataaaaacttatttgtttgcataagttgttttgcataagctcaaaa 12473189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 38372617 - 38372525
Alignment:
Q  76 taaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||| || ||||||  ||||| |||||| ||||| | ||||||||||| |||||| |||| ||||||| |||||||  ||||||||||||||||    
T  38372617 taaactaccttgacaaacttatgaataatacataagagcttatttatttgcataagctgttttgcataagctcaaaa--ataagtcaatccaaac 38372525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 22032822 - 22032744
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| || || ||| ||||||||||||| ||||||||| ||||||||| ||||||||||| | ||||| ||| ||||    
T  22032822 ataaactacattaacatgcttataaataatacataaaaacatatttatttgcataagttgttttacataagctctaaaa 22032744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 26331844 - 26331778
Alignment:
Q  102 aatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| |||| |||||||||||||||||| | || ||||||| |||  ||||||||||||||||||||    
T  26331844 aatgcagaaaagcttatttatttacataagctattttgcataagctc--aaacataagtcaatccaaac 26331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 21249198 - 21249138
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    ||||| |||||| ||||||||||||||||||| ||||||| ||| ||||||| | ||||||    
T  21249198 cttatgaataatacataaaaacttatttatttgcataagtagttttgcataaacgcaaaaa 21249138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30181693 - 30181649
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  30181693 atagtttatgcaaataaataagcttttatgttaattcataagttc 30181649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 991542 - 991499
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||||||||||||||||||||| | |||||| ||||    
T  991542 cttataaataatgcataaaaacttatttatgtgcataaggtgtt 991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 21027557 - 21027600
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||    
T  21027557 cttataaataatacataaaaacttatttgtttacataagctgtt 21027600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 35246710 - 35246671
Alignment:
Q  97 taaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  35246710 taaataatacataaaaacttatttatttgcataagttgtt 35246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 41677436 - 41677373
Alignment:
Q  73 taataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||| || ||||||  ||||| |||||| |||||||| |||||||||| |||||||||||    
T  41677436 taataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataagttgtt 41677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14691242 - 14691313
Alignment:
Q  1 atagtttatgcaaataaataagcttt-atgctaattcataagttcgttctcactatggaaaattatatcttcataa 75  Q
    |||||| |||||||||||||| |||| ||| ||||||||||||||    ||||||  |||||||||||||||||||    
T  14691242 atagttcatgcaaataaataaccttttatgttaattcataagttc----tcactaacgaaaattatatcttcataa 14691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 22575628 - 22575553
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||||||||| ||||||||| ||||||||| |||||| |||| | ||||| ||| |||  |||||| |||||||||    
T  22575628 cttataaataatacataaaaacgtatttatttgcataagatgttttacataagctctaaa--ataagttaatccaaac 22575553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 25536319 - 25536277
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||    
T  25536319 ttataaataatacataaaaacttatttatttacgtaagctgtt 25536277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 28004625 - 28004583
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  28004625 ttataaataatacataaaaacttatttatttgcataagctgtt 28004583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 42083461 - 42083499
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataag 131  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  42083461 cttatgaataatacataaaaacttatttatttacataag 42083499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 34922991 - 34922930
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||| || ||||||  ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  34922991 ataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataagttgtt 34922930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1401216 - 1401172
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||    
T  1401216 atagttcatgcaaataaataagcttttatgttaattcataagttc 1401172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Complemental strand, 16958858 - 16958798
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||||||||| |||||||| ||||||| || ||||||||||| |  |||| ||||||||    
T  16958858 cttataaataatacataaaaatttatttagttgcataagttgttttatataagctcaaaaa 16958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29390494 - 29390534
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataa 40  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  29390494 atagtttatgcaaataaataagcttttatgttaattcataa 29390534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 29390576 - 29390669
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || || ||| |||||| |||||| ||| |||  |||||||||| ||||||||||| | ||||| |||||||  ||||| ||||||||||    
T  29390576 ataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataagttgttttccataaactcaaaa--ataagccaatccaaac 29390669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 33321429 - 33321522
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    |||||| || |||||| |||||| | |||| |||||||||||| |||||| ||||||||||| ||||||| ||  |||| ||||||||||| ||||    
T  33321429 ataaactaccttgacaagcttatgagtaatacataaaaacttaattatttgcataagttgttttgcataagct--aaaaaataagtcaatcgaaac 33321522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 29774781 - 29774727
Alignment:
Q  99 aataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||| || |||||    
T  29774781 aataatgcataaaagtttatttatttgcataagttgttatgcataagctaaaaaa 29774727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 32522090 - 32522132
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  32522090 ttataaataatacataaaaacttatttatttacataagctgtt 32522132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 2790106 - 2790175
Alignment:
Q  85 ttgacaggcttataaataatgcataaaaac-ttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| |||||| |||||||||||||| | |||||||||| |||||| |||| ||||||| ||||||||    
T  2790106 ttgacaagcttatcaataatgcataaaagctttatttatttgcataagctgttttgcataagctcaaaaa 2790175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 33321338 - 33321415
Alignment:
Q  75 ataaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||| || |||||| |||||| |||||  ||||||| ||||||||||| || |||||||| ||||||| |||||||    
T  33321338 ataaactaccttgacaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgcataagctcaaaa 33321415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 32366192 - 32366152
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagtt 133  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  32366192 cttataaataatacataaaaacttatttatttgcataagtt 32366152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 446494 - 446451
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  446494 cttataaataatatataaaaacttatttatttgcataagttgtt 446451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 735962 - 735886
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||||||||||| ||||||| ||||||| |||||| ||||| || ||||||| ||| |||   |||||||||||||||    
T  735962 gcttataaataatacataaaagcttatttgtttacacaagttattttgcataagctctaaa--ttaagtcaatccaaac 735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4533465 - 4533422
Alignment:
Q  1 atagtttatgcaaataaataagctt-tatgctaattcataagtt 43  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  4533465 atagcttatgcaaataaataagcttctatgctaattcataagtt 4533422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 40301394 - 40301351
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||    
T  40301394 cttataaataatacataaaaacttatttatttgcataagctgtt 40301351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 38216078 - 38215990
Alignment:
Q  76 taaacaactttgacaggcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaac 170  Q
    ||||| || |||||| |||||| |||||| |||||    |||||||||| |||||| |||| ||||||| ||||||||  |||||||||||||||    
T  38216078 taaactaccttgacaagcttatgaataatacataa----ttatttatttgcataagctgttttgcataagctcaaaaa--taagtcaatccaaac 38215990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 27703501 - 27703562
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaa 153  Q
    |||||| ||||||  |||||| ||||||||||| |||||| |||| ||||||| ||||||||    
T  27703501 gcttatgaataatatataaaagcttatttatttgcataagctgttttgcataagctcaaaaa 27703562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 34913434 - 34913491
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaa 150  Q
    ||||| |||||| ||||||| ||||||||||| |||||| |||| ||||||| |||||    
T  34913434 cttatgaataatacataaaagcttatttatttgcataagctgttttgcataagctcaa 34913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 1768797 - 1768753
Alignment:
Q  108 taaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    ||||||||||||||||| |||||| |||| ||||||| |||||||    
T  1768797 taaaaacttatttatttgcataagctgttttgcataaactcaaaa 1768753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 2757114 - 2757190
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaaacataagtcaatccaaactg 172  Q
    |||||||||||| ||||||| ||||||||||| |||||| |||| |  |||| ||| |||  ||||||||||||||||||    
T  2757114 cttataaataatacataaaa-cttatttatttgcataagctgttttatataagctctaaa--ataagtcaatccaaactg 2757190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4027068 - 4027024
Alignment:
Q  1 atagtttatgcaaataaataagct-ttatgctaattcataagttc 44  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||    
T  4027068 atagcttatgcaaataaataagctattatgttaattcataagttc 4027024  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 19683616 - 19683576
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagtt 133  Q
    |||||| ||||| |||||||||| |||||||||||||||||    
T  19683616 cttatatataatacataaaaactcatttatttacataagtt 19683576  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 21788500 - 21788440
Alignment:
Q  92 gcttataaataatgcataaaaacttatttatttacataagttgttatgcataacctcaaaa 152  Q
    |||||| ||||||  |||||| ||||||||||| |||||| |||| ||||||| |||||||    
T  21788500 gcttatgaataataaataaaagcttatttatttgcataagatgttttgcataaactcaaaa 21788440  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 26440208 - 26440252
Alignment:
Q  107 ataaaaacttatttatttacataagttgttatgcataacctcaaa 151  Q
    ||||||||||||||||||||||||||| || | ||||| ||||||    
T  26440208 ataaaaacttatttatttacataagttatttttcataagctcaaa 26440252  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 31165056 - 31165028
Alignment:
Q  100 ataatgcataaaaacttatttatttacat 128  Q
    |||||||||||||||||||||||||||||    
T  31165056 ataatgcataaaaacttatttatttacat 31165028  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 178542 - 178499
Alignment:
Q  93 cttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||    
T  178542 cttataaataatacataaaagcttatttatttgcataagttgtt 178499  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 24796 - 24744
Alignment:
Q  84 tttgacaggcttataaataatgcataaaaacttatttatttacataagttgtt 136  Q
    ||||||| |||||| |||||| ||||||| ||||||||||| |||||| ||||    
T  24796 tttgacaagcttatgaataatacataaaagcttatttatttgcataagctgtt 24744  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 38497 - 38533
Alignment:
Q  94 ttataaataatgcataaaaacttatttatttacataa 130  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  38497 ttataaataatacataaaaacttatttatttgcataa 38533  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48571 - 48615
Alignment:
Q  1 atagtttatgcaaataaataagc-tttatgctaattcataagttc 44  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||    
T  48571 atagcttatgcaaataaataagcttttatgttaattcataagttc 48615  T

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