View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18566_low_25 (Length: 226)
Name: NF18566_low_25
Description: NF18566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18566_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 36696178 - 36695988
Alignment:
| Q |
18 |
attcaagtgtgatcacaaagttttggcaatgtttgatgaacttgcctaatgagtttactattaaagtagtaaatgtgatgttgcagctgaaggaattggg |
117 |
Q |
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| T |
36696178 |
attcaagtgtgatcacaaagttttggcaatgtttgatgaacttgcctaatgagtttactattaaagtagtaaatgtgatgttgcagctgaaggaattggg |
36696079 |
T |
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| Q |
118 |
aaaagaagatccaagaagggtcattcattctttgaaagtagcatttgctattacattggtttcaacattttactatcttaaacctctctat |
208 |
Q |
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| T |
36696078 |
aaaagaagatccaagaagggtcattcattctttgaaagtagcatttgctattacattggtttcaacattttactatcttaaacctctctat |
36695988 |
T |
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