View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18566_low_9 (Length: 345)

Name: NF18566_low_9
Description: NF18566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18566_low_9
NF18566_low_9
[»] chr7 (35 HSPs)
chr7 (100-326)||(24420269-24420494)
chr7 (10-96)||(24044043-24044129)
chr7 (10-96)||(34853391-34853477)
chr7 (13-95)||(36683467-36683549)
chr7 (10-96)||(47814635-47814721)
chr7 (13-96)||(42456519-42456602)
chr7 (10-96)||(19816264-19816350)
chr7 (10-96)||(46814405-46814491)
chr7 (10-80)||(4894515-4894585)
chr7 (10-96)||(22275425-22275510)
chr7 (10-88)||(36682843-36682921)
chr7 (10-82)||(47813985-47814057)
chr7 (13-88)||(19816895-19816970)
chr7 (13-83)||(22276079-22276149)
chr7 (10-88)||(4895082-4895160)
chr7 (10-96)||(24323982-24324067)
chr7 (10-88)||(27855574-27855651)
chr7 (10-88)||(34853996-34854074)
chr7 (10-88)||(42455929-42456007)
chr7 (10-92)||(30711792-30711874)
chr7 (10-88)||(46732575-46732653)
chr7 (10-80)||(46815062-46815132)
chr7 (10-74)||(32499872-32499936)
chr7 (10-58)||(32499287-32499335)
chr7 (47-97)||(84376-84426)
chr7 (46-96)||(27856166-27856216)
chr7 (10-88)||(33805977-33806055)
chr7 (10-54)||(18520899-18520943)
chr7 (13-88)||(36620126-36620201)
chr7 (13-97)||(36620743-36620821)
chr7 (30-88)||(33806586-33806645)
chr7 (47-88)||(85086-85127)
chr7 (50-83)||(4270189-4270222)
chr7 (51-96)||(8464387-8464432)
chr7 (47-96)||(45026298-45026347)
[»] chr1 (34 HSPs)
chr1 (10-98)||(43368835-43368923)
chr1 (10-96)||(52859788-52859874)
chr1 (10-97)||(8560743-8560829)
chr1 (10-96)||(1403688-1403773)
chr1 (10-96)||(27797117-27797203)
chr1 (10-82)||(42839548-42839620)
chr1 (10-97)||(42839700-42839787)
chr1 (10-88)||(1403048-1403126)
chr1 (10-96)||(7219648-7219733)
chr1 (10-92)||(49533747-49533829)
chr1 (12-88)||(27817006-27817082)
chr1 (13-96)||(42840316-42840399)
chr1 (10-88)||(6288204-6288282)
chr1 (10-88)||(8560164-8560242)
chr1 (10-88)||(42838945-42839023)
chr1 (10-88)||(49534396-49534474)
chr1 (10-96)||(51248483-51248569)
chr1 (10-83)||(43368203-43368276)
chr1 (10-94)||(48843582-48843666)
chr1 (10-88)||(27797736-27797814)
chr1 (10-88)||(7782691-7782769)
chr1 (10-96)||(41563179-41563265)
chr1 (10-58)||(48843962-48844010)
chr1 (47-81)||(29148955-29148989)
chr1 (10-71)||(48369507-48369568)
chr1 (10-74)||(27934295-27934358)
chr1 (56-96)||(48620369-48620409)
chr1 (10-40)||(6287676-6287706)
chr1 (10-56)||(7219048-7219094)
chr1 (10-52)||(37725423-37725465)
chr1 (10-83)||(11032181-11032254)
chr1 (10-51)||(41563792-41563833)
chr1 (47-83)||(50269247-50269283)
chr1 (10-58)||(51247866-51247914)
[»] chr4 (51 HSPs)
chr4 (10-97)||(55816450-55816537)
chr4 (10-96)||(20075525-20075611)
chr4 (10-96)||(198999-199085)
chr4 (10-96)||(36945223-36945309)
chr4 (10-97)||(389405-389492)
chr4 (11-98)||(26423757-26423844)
chr4 (10-88)||(199226-199304)
chr4 (10-96)||(36111217-36111302)
chr4 (10-96)||(52597490-52597576)
chr4 (10-83)||(25370392-25370465)
chr4 (11-96)||(48090466-48090551)
chr4 (13-96)||(12640589-12640672)
chr4 (10-93)||(25369786-25369869)
chr4 (13-96)||(48782077-48782160)
chr4 (10-88)||(2713843-2713921)
chr4 (10-88)||(12639973-12640051)
chr4 (10-96)||(32902465-32902551)
chr4 (10-88)||(48091095-48091173)
chr4 (10-88)||(55815833-55815911)
chr4 (13-88)||(388761-388836)
chr4 (13-96)||(40345133-40345216)
chr4 (10-88)||(31876796-31876874)
chr4 (10-96)||(35427246-35427331)
chr4 (10-88)||(40847685-40847763)
chr4 (10-94)||(28223565-28223649)
chr4 (22-97)||(20422130-20422205)
chr4 (10-88)||(20422731-20422809)
chr4 (10-88)||(26424404-26424482)
chr4 (10-88)||(32291023-32291101)
chr4 (10-88)||(37567474-37567552)
chr4 (10-96)||(40848130-40848216)
chr4 (10-88)||(52597711-52597789)
chr4 (11-88)||(33569728-33569805)
chr4 (10-88)||(29809087-29809165)
chr4 (10-79)||(36944627-36944696)
chr4 (13-96)||(31877435-31877519)
chr4 (10-88)||(32901859-32901937)
chr4 (10-88)||(40344511-40344589)
chr4 (19-88)||(47321767-47321836)
chr4 (10-97)||(3708778-3708859)
chr4 (13-79)||(31842726-31842791)
chr4 (47-97)||(52869446-52869496)
chr4 (10-80)||(6862663-6862733)
chr4 (47-96)||(3221424-3221473)
chr4 (48-88)||(35428238-35428278)
chr4 (10-53)||(20076186-20076229)
chr4 (11-80)||(47328397-47328466)
chr4 (17-96)||(52722080-52722158)
chr4 (54-88)||(18501747-18501781)
chr4 (47-96)||(33757421-33757470)
chr4 (56-88)||(45778733-45778765)
[»] chr3 (49 HSPs)
chr3 (10-96)||(55281835-55281921)
chr3 (10-96)||(29342341-29342427)
chr3 (10-88)||(3944903-3944981)
chr3 (10-92)||(8427743-8427825)
chr3 (10-96)||(25025764-25025850)
chr3 (10-96)||(44868618-44868704)
chr3 (10-83)||(32672179-32672252)
chr3 (10-96)||(23584237-23584323)
chr3 (10-88)||(23584883-23584961)
chr3 (10-96)||(23599060-23599146)
chr3 (10-88)||(23599706-23599784)
chr3 (10-96)||(31014337-31014423)
chr3 (10-73)||(55282421-55282484)
chr3 (10-88)||(25025182-25025260)
chr3 (10-88)||(50687708-50687786)
chr3 (10-83)||(37373978-37374051)
chr3 (10-97)||(19555923-19556013)
chr3 (21-96)||(41459130-41459204)
chr3 (10-96)||(24220579-24220665)
chr3 (10-88)||(31014924-31015002)
chr3 (10-96)||(37375468-37375554)
chr3 (10-96)||(48218591-48218677)
chr3 (10-78)||(19555288-19555356)
chr3 (10-88)||(42356241-42356322)
chr3 (13-88)||(50675128-50675203)
chr3 (10-96)||(41875616-41875702)
chr3 (10-80)||(44868023-44868093)
chr3 (10-76)||(47737673-47737739)
chr3 (13-96)||(37374609-37374692)
chr3 (10-88)||(37374828-37374901)
chr3 (10-96)||(47737064-47737149)
chr3 (10-83)||(48219235-48219308)
chr3 (18-98)||(43658253-43658332)
chr3 (13-95)||(50674630-50674707)
chr3 (47-96)||(38279409-38279458)
chr3 (10-58)||(43658895-43658943)
chr3 (13-68)||(49752913-49752968)
chr3 (10-58)||(29342993-29343041)
chr3 (10-58)||(38575059-38575107)
chr3 (10-50)||(40887941-40887981)
chr3 (10-57)||(49752312-49752359)
chr3 (10-51)||(32672783-32672824)
chr3 (10-67)||(43103928-43103985)
chr3 (47-96)||(46187033-46187082)
chr3 (10-54)||(24221172-24221216)
chr3 (10-58)||(38575642-38575690)
chr3 (30-88)||(43104513-43104572)
chr3 (54-88)||(53269392-53269426)
chr3 (53-97)||(49161866-49161910)
[»] chr2 (40 HSPs)
chr2 (10-96)||(28224388-28224474)
chr2 (13-96)||(6849288-6849371)
chr2 (10-96)||(16887583-16887669)
chr2 (10-97)||(3595245-3595332)
chr2 (10-93)||(10883290-10883373)
chr2 (10-93)||(39477325-39477408)
chr2 (10-88)||(4386960-4387038)
chr2 (10-88)||(9224274-9224352)
chr2 (10-88)||(7716679-7716757)
chr2 (10-96)||(7717285-7717370)
chr2 (10-88)||(16571126-16571204)
chr2 (10-96)||(16571726-16571812)
chr2 (10-88)||(20244171-20244249)
chr2 (10-88)||(28223796-28223874)
chr2 (13-83)||(6849545-6849615)
chr2 (10-96)||(7583132-7583218)
chr2 (10-92)||(11256120-11256202)
chr2 (13-96)||(40166846-40166929)
chr2 (10-88)||(7583793-7583871)
chr2 (10-88)||(8113300-8113378)
chr2 (10-82)||(30161947-30162019)
chr2 (22-96)||(8112680-8112754)
chr2 (13-83)||(16903092-16903162)
chr2 (10-70)||(20243579-20243639)
chr2 (29-96)||(4386355-4386422)
chr2 (13-88)||(8963512-8963587)
chr2 (10-77)||(39476534-39476601)
chr2 (10-83)||(11256740-11256813)
chr2 (10-88)||(3595895-3595973)
chr2 (10-88)||(33847881-33847959)
chr2 (10-88)||(40165881-40165959)
chr2 (10-67)||(467134-467191)
chr2 (10-81)||(467341-467412)
chr2 (46-88)||(12206796-12206838)
chr2 (10-96)||(17918021-17918107)
chr2 (10-88)||(12207385-12207464)
chr2 (49-88)||(18950534-18950573)
chr2 (50-88)||(43743842-43743880)
chr2 (50-83)||(14565214-14565247)
chr2 (47-83)||(32471952-32471988)
[»] chr8 (37 HSPs)
chr8 (10-105)||(11998447-11998542)
chr8 (10-96)||(43591007-43591093)
chr8 (10-88)||(7818482-7818560)
chr8 (10-88)||(33114188-33114266)
chr8 (10-88)||(39852162-39852240)
chr8 (10-96)||(40907599-40907684)
chr8 (13-98)||(43481284-43481369)
chr8 (10-88)||(16889203-16889281)
chr8 (10-96)||(30115996-30116082)
chr8 (10-88)||(35237267-35237345)
chr8 (10-96)||(36848197-36848283)
chr8 (10-96)||(44061985-44062071)
chr8 (10-96)||(7819097-7819183)
chr8 (10-88)||(11999080-11999158)
chr8 (10-96)||(16889828-16889913)
chr8 (10-91)||(16880518-16880599)
chr8 (10-102)||(4373680-4373772)
chr8 (10-78)||(38778172-38778240)
chr8 (10-77)||(30115386-30115453)
chr8 (11-94)||(35237865-35237947)
chr8 (10-88)||(43480624-43480702)
chr8 (10-83)||(33113588-33113661)
chr8 (13-97)||(38778798-38778882)
chr8 (10-78)||(40309500-40309568)
chr8 (10-88)||(43591616-43591694)
chr8 (13-80)||(44062599-44062666)
chr8 (10-88)||(10806437-10806515)
chr8 (10-88)||(16879896-16879974)
chr8 (10-96)||(39852803-39852889)
chr8 (10-70)||(2209032-2209092)
chr8 (10-58)||(4374301-4374349)
chr8 (13-88)||(4374995-4375070)
chr8 (56-97)||(37533323-37533364)
chr8 (10-57)||(10805987-10806034)
chr8 (47-88)||(41761807-41761848)
chr8 (17-83)||(38572235-38572301)
chr8 (55-88)||(37532584-37532617)
[»] chr6 (14 HSPs)
chr6 (10-96)||(6032158-6032244)
chr6 (10-95)||(5523201-5523286)
chr6 (10-96)||(12809069-12809155)
chr6 (10-83)||(31723846-31723919)
chr6 (10-96)||(30610711-30610797)
chr6 (10-88)||(33668229-33668307)
chr6 (10-97)||(13944289-13944376)
chr6 (10-88)||(5523846-5523924)
chr6 (10-88)||(12809702-12809780)
chr6 (10-88)||(13936640-13936718)
chr6 (10-88)||(30611345-30611423)
chr6 (13-97)||(33668833-33668917)
chr6 (10-88)||(6032753-6032831)
chr6 (10-88)||(33648163-33648241)
[»] chr5 (24 HSPs)
chr5 (10-88)||(3957508-3957586)
chr5 (10-96)||(4928871-4928957)
chr5 (10-96)||(26687500-26687586)
chr5 (10-96)||(26957231-26957317)
chr5 (10-96)||(21769994-21770084)
chr5 (13-88)||(4929509-4929584)
chr5 (10-88)||(8813683-8813761)
chr5 (10-98)||(3739663-3739751)
chr5 (10-88)||(5324403-5324481)
chr5 (10-88)||(33430051-33430128)
chr5 (13-92)||(3958137-3958216)
chr5 (10-88)||(28075969-28076047)
chr5 (10-102)||(42407986-42408078)
chr5 (46-95)||(8813078-8813127)
chr5 (32-96)||(5324304-5324368)
chr5 (17-83)||(25075004-25075070)
chr5 (17-83)||(25132973-25133039)
chr5 (10-58)||(42408565-42408613)
chr5 (10-57)||(13738099-13738146)
chr5 (47-101)||(39148763-39148817)
chr5 (47-88)||(39149468-39149509)
chr5 (10-58)||(3739038-3739086)
chr5 (17-88)||(25074291-25074362)
chr5 (17-88)||(25132260-25132331)
[»] scaffold0229 (1 HSPs)
scaffold0229 (10-88)||(15233-15311)
[»] scaffold1095 (1 HSPs)
scaffold1095 (10-97)||(1484-1571)
[»] scaffold0007 (1 HSPs)
scaffold0007 (10-88)||(11274-11351)
[»] scaffold0368 (1 HSPs)
scaffold0368 (10-88)||(11784-11862)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 100 - 326
Target Start/End: Complemental strand, 24420494 - 24420269
Alignment:
Q  100 aaattgttaaagttgaaaataaaggataaaaattttagtggagattaatgtccattactgattttgaggaatgtgtctctcattaagcctcatagaaaat 199  Q
    |||||||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  24420494 aaattgttaa-gttgaaaataaaggataaaaactttagtggaggttgatgtccattactgattttgaggagtgtgtctctcattaagcctcataggaaat 24420396  T
Q  200 tagtgtaagttccttttggtgtatttagttaaacatagacaaagtttgttgtatatagttaagcatgaacaacaaagtgttcgttggataataatttggt 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24420395 tagtgtaagttccttttggtgtatttagttaaacatagacaaagtttgttgtatatagttaagcatgaacaacaaagtgttcgttggataatcatttggt 24420296  T
Q  300 gacaaatctatgatccaatagagtaag 326  Q
    |||||||||||||||||||||||||||    
T  24420295 gacaaatctatgatccaatagagtaag 24420269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 24044043 - 24044129
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24044043 aagaatatgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 24044129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 34853477 - 34853391
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34853477 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 34853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 36683467 - 36683549
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacac 95  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36683467 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacac 36683549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 47814635 - 47814721
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  47814635 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaacacacacc 47814721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 42456519 - 42456602
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42456519 aatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 42456602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 19816350 - 19816264
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19816350 aagaatatgttttacacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 19816264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 46814491 - 46814405
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  46814491 aagaatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgtaaacacacacc 46814405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 4894585 - 4894515
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  4894585 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 22275510 - 22275425
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  22275510 aagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaatgattaaccttttccatgtgaacacacacc 22275425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 36682921 - 36682843
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  36682921 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 36682843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 47814057 - 47813985
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttccca 82  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  47814057 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttccca 47813985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 19816895 - 19816970
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  19816895 aatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatgaa 19816970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 22276079 - 22276149
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22276079 aatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccat 22276149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 4895082 - 4895160
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||| |||||||||||||||| ||||    
T  4895082 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaa 4895160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 24323982 - 24324067
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||| ||| ||| ||| |||||||| |||||||| |||||||||||||||| ||||||||||||    
T  24323982 aagaatatgttcttcacttaatctaattattgaatccaa-tttcccatagtgggaaatgattaacctttcccatgtgaacacacacc 24324067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 27855651 - 27855574
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||| ||||    
T  27855651 aagaatatgttcttcacttaatctaatcattgaat-caactttctcatggtgggaaatgattaacctttcccatgtgaa 27855574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 34853996 - 34854074
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| | |  |||||||| |||||||||||||||||||||||||||| ||||    
T  34853996 aagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaa 34854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 42456007 - 42455929
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| ||| |||||| ||||||||||||||||||||||||||| ||||    
T  42456007 aagaatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgggaaaggattaacctttcccatgtgaa 42455929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 30711874 - 30711792
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacaca 92  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||  |||||||||| |||| ||||||||    
T  30711874 aagaatatgttcttcacttaatctaataattgaatccaacttttccatggtgggaaaaaattaaccttttccatgtgaacaca 30711792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 46732653 - 46732575
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| |||| ||||||||| ||||||||||||||| ||||    
T  46732653 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaagaattaacctttcccatgtgaa 46732575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 46815062 - 46815132
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||  |||||| |||||    
T  46815062 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaataattaacttttcc 46815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 32499872 - 32499936
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaac 74  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||| ||||||    
T  32499872 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgttgtgggaaagaattaac 32499936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 32499335 - 32499287
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  32499335 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 84426 - 84376
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  84426 aactttcccatagtgggaaaggattcacctttcccatgtgaacacacacca 84376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 27856166 - 27856216
Alignment:
Q  46 caactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  27856166 caacttttccatggtgggaaatgattaacctttcccatgtgaacacacacc 27856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 33806055 - 33805977
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| ||||||| ||||||||| ||| ||||   ||||||||| ||||    
T  33806055 aagaatatgttcttcacttaatttaatcattgaatccaacttttccatggtggaaaatgattggtctttcccatgtgaa 33805977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 18520943 - 18520899
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcc 54  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  18520943 aagaatatgttcttcacttaatctaatcattgaatccaactttcc 18520899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 36620201 - 36620126
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| |||||||||| |||||||| ||| |||||||| |||| | | ||| |||||||||||||||| ||||    
T  36620201 aatatgtttttcacttaatttaatcattgaattcaactttctcatgatagaaaaagattaacctttcccatatgaa 36620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 36620743 - 36620821
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||||||||||||||||||||||||||| ||| |||||   |||   ||| ||| ||||||||||| |||| |||||||||||||    
T  36620743 aatatgttcttcacttaatctaatcattgaatccaact---cca---tggaaaatgattaaccttttccatgtgaacacacacca 36620821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 33806586 - 33806645
Alignment:
Q  30 atctaatcattaaatac-aactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||  |||||||| |||||||| |||||||||||||||| ||||||||||| ||||    
T  33806586 atctaatggttaaataccaactttccaatggtgggaaaggattgacctttcccatgtgaa 33806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 85086 - 85127
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  85086 aacttttccatggtgggaaaggattcacctttcccatgtgaa 85127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 4270222 - 4270189
Alignment:
Q  50 tttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||||||||||||||||| |||||||||||    
T  4270222 tttcccatggtgggaaaggattcacctttcccat 4270189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 8464432 - 8464387
Alignment:
Q  51 ttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||  || ||||||||||| ||||||||||||    
T  8464432 ttcccatggtgggaaagttttcacctttcccatatgaacacacacc 8464387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 45026347 - 45026298
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||| |||||||||||||||||   ||||||||| ||||||||||||    
T  45026347 aactttctcatggtgggaaaggattggtctttcccatatgaacacacacc 45026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 43368835 - 43368923
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaa 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43368835 aagaatatgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgtgaacacacaccaa 43368923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 52859788 - 52859874
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  52859788 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaacacacacc 52859874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 8560743 - 8560829
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  8560743 aagaatatgttcttcacttaatctaatcattgaat-caacttttccatggtgggaaaggattaacctttcccatgtgaacacacacca 8560829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 1403688 - 1403773
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  1403688 aagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaaggattaacctttcctatgtgaacacacacc 1403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 27797203 - 27797117
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  27797203 aagaatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgtgaacacacacc 27797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 42839548 - 42839620
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttccca 82  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  42839548 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 42839787 - 42839700
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||||||||||||||||||||||| |||||| | |  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42839787 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacca 42839700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 1403126 - 1403048
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  1403126 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaa 1403048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7219648 - 7219733
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  7219648 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatgatgggaaaggattaacctttcccatgtgaacacacacc 7219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 49533829 - 49533747
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacaca 92  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| || || ||||||||    
T  49533829 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaaggattaaccttccctatgtgaacaca 49533747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 27817006 - 27817082
Alignment:
Q  12 gaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||||| ||||    
T  27817006 gaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtgaa 27817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 42840316 - 42840399
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| |||||||||||||||| | ||||||||||    
T  42840316 aatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgtaaacacacacc 42840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 6288204 - 6288282
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||  |||||||| ||||||||||||||||||||| ||||    
T  6288204 aagaatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaa 6288282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 8560242 - 8560164
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||| || ||| |||| |||||||||||| |||||||||||||||||||| ||||    
T  8560242 aagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtgaa 8560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 42839023 - 42838945
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||| |||| ||||    
T  42839023 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaa 42838945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 49534396 - 49534474
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  49534396 aagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 49534474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 51248483 - 51248569
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||| ||| |||  |||||| |||||||||||||  |||||||||||||||| |||||||||||    
T  51248483 aagaatatgttcttcacttaatctaattattgaatcaaacttttccatggtgggaaaaaattaacctttcccattggaacacacacc 51248569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 43368276 - 43368203
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||||||||||||||||| |||||||| |||  ||| |||||||||||||||||||||||||||||||||    
T  43368276 aagaatatgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 48843666 - 48843582
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacaca 94  Q
    ||||||||||| |||||||||| |||||||| ||| ||||||||| |||||| |||| |||||||||||||||| ||||||||||    
T  48843666 aagaatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgtgaacacaca 48843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27797736 - 27797814
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| | |  ||||||||||| |||| |||||||||||||||||||| ||||    
T  27797736 aagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaa 27797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7782691 - 7782769
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||| ||| ||||||| ||| ||||||||||||||| ||||||||||  |||||||||| ||||    
T  7782691 aagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtgaa 7782769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 41563265 - 41563179
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||| |||||||| |||||||||| ||| ||| ||||||||||||||| | |||| |||||| |||||||| ||||||||||||    
T  41563265 aagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcccatatgaacacacacc 41563179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 48843962 - 48844010
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  48843962 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 29148989 - 29148955
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttccc 81  Q
    |||||||||||||||||||||||||||||||||||    
T  29148989 aactttcccatggtgggaaaggattaacctttccc 29148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 48369568 - 48369507
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggatt 71  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||| || |||| ||| ||||    
T  48369568 aagaatatgttcttcacttaatccaatcattgaatccaactttcctatagtggaaaatgatt 48369507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27934295 - 27934358
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaac 74  Q
    ||||||||||||||| |||||||||||||||  || ||||||||||||| ||| |||| ||||||    
T  27934295 aagaatatgttcttctcttaatctaatcatt-gatccaactttcccatgttggaaaagaattaac 27934358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 48620369 - 48620409
Alignment:
Q  56 atggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  48620369 atggtgggaaaggattcacctttcccatgtgaacacacacc 48620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Complemental strand, 6287706 - 6287676
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcatt 40  Q
    |||||||||||||||||||||||||||||||    
T  6287706 aagaatatgttcttcacttaatctaatcatt 6287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 7219094 - 7219048
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttccca 56  Q
    |||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  7219094 aagaatatattcttcatttaatctaatcattgaatccaactttccca 7219048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37725465 - 37725423
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaacttt 52  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||    
T  37725465 aagaatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 11032181 - 11032254
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||| ||||| | ||||||||||||  | |||| |||||||||||||||||||||  |||  ||||||||||    
T  11032181 aagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccat 11032254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 41563792 - 41563833
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactt 51  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||    
T  41563792 aagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 50269247 - 50269283
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||||||||||||||| || ||||||||    
T  50269247 aactttcccatggtgggaaaggattcacatttcccat 50269283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 51247914 - 51247866
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    |||||||| |||||||||||||||||||||| ||| ||| ||| |||||    
T  51247914 aagaatatattcttcacttaatctaatcattgaatccaatttttccatg 51247866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 55816450 - 55816537
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55816450 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacca 55816537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 20075611 - 20075525
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20075611 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 20075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 199085 - 198999
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  199085 aagaatatgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 198999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 36945223 - 36945309
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  36945223 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaacacacacc 36945309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 389405 - 389492
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  389405 aagaatatgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaacacacacca 389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 26423844 - 26423757
Alignment:
Q  11 agaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaa 98  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaacacacaccaa 26423757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 199226 - 199304
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  199226 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 36111217 - 36111302
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  36111217 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 36111302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 52597576 - 52597490
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  52597576 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgtgaacacacacc 52597490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 25370392 - 25370465
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25370392 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccat 25370465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 48090551 - 48090466
Alignment:
Q  11 agaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgtgaacacacacc 48090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 12640589 - 12640672
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  12640589 aatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaacacacacc 12640672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 25369869 - 25369786
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacac 93  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||| |||||||||    
T  25369869 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaacacac 25369786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 48782077 - 48782160
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  48782077 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgtgaacacacacc 48782160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 2713843 - 2713921
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  2713843 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 2713921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12640051 - 12639973
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  12640051 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 12639973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 32902465 - 32902551
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||| ||| ||||||||||||    
T  32902465 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgtgaacacacacc 32902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 48091095 - 48091173
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  48091095 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaa 48091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 55815911 - 55815833
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  55815911 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaa 55815833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 388836 - 388761
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  388836 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 40345133 - 40345216
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| |||  ||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  40345133 aatatgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgtgaacacacacc 40345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31876874 - 31876796
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||    
T  31876874 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaa 31876796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 35427331 - 35427246
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||| || |||||||||||||||||||| ||||||||||||    
T  35427331 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaaaggattaacctttcccatgtgaacacacacc 35427246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40847763 - 40847685
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||| ||||    
T  40847763 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaa 40847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 28223649 - 28223565
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacaca 94  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||| | |||||| |||||||||||||||| ||||||||||    
T  28223649 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagagggaaaagattaacctttcccatgtgaacacaca 28223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 20422205 - 20422130
Alignment:
Q  22 ttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||| |||  | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20422205 ttcacttaatctaatcattgaatctacctttcccatggtgggaaaggattaacctttcccatgtgaacacacacca 20422130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 20422731 - 20422809
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||| ||||||||| ||||    
T  20422731 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaa 20422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26424404 - 26424482
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| | ||||||||||||| ||||    
T  26424404 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaagaactaacctttcccatgtgaa 26424482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 32291101 - 32291023
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| | ||||| |||||||||||||||| ||||    
T  32291101 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatgattggaaatgattaacctttcccatgtgaa 32291023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 37567474 - 37567552
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||||| ||||    
T  37567474 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtgaa 37567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 40848130 - 40848216
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||| ||| |||| ||||||||||| |||| ||||||||||||    
T  40848130 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgtgaacacacacc 40848216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 52597711 - 52597789
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||  |||||||||||||||||||| ||||    
T  52597711 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtgaa 52597789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 33569805 - 33569728
Alignment:
Q  11 agaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||||||| ||||||||||| ||||    
T  33569805 agaatatgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtgaa 33569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 29809087 - 29809165
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| |  |||| |||||||||||||||| ||||    
T  29809087 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatgaa 29809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 36944696 - 36944627
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttc 79  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||| ||||||||||||    
T  36944696 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaagattaacctttc 36944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 31877435 - 31877519
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggatt-aacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||| ||| ||| |||| ||||||||||||    
T  31877435 aatatgttcttcacttaatctaatcattaaatccaactttcccatagtgaaaaaggattaaactttttccatgtgaacacacacc 31877519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 32901937 - 32901859
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||| | | |||||||| ||||    
T  32901937 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaaggataatcttttcccatgtgaa 32901859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40344589 - 40344511
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||| |||| || ||||||||||| ||||||||| ||||    
T  40344589 aagaatatgttcttcacttaatctaataatttaatccaactttctcatgatgagaaaggattaaactttcccatatgaa 40344511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 47321836 - 47321767
Alignment:
Q  19 ttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||| ||||||| |||| |||  |||||||||||||||||||| ||||    
T  47321836 ttcttcacttaatctaatcattaaatccaacttttccatagtgataaaggattaacctttcccatatgaa 47321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 3708859 - 3708778
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||| ||||||||| |||||||||||||||| ||| |||||||||||||||      ||||||||||||||||| |||||||||||||    
T  3708859 aagagtatgttctttacttaatctaatcattgaatccaactttcccatggt------ggattaacctttcccatgtgaacacacacca 3708778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 31842726 - 31842791
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttc 79  Q
    |||||||||||||||||||||||||||| ||| | ||||||||||||| ||||| ||||||||||||    
T  31842726 aatatgttcttcacttaatctaatcattgaat-ccactttcccatggttggaaatgattaacctttc 31842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 52869496 - 52869446
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  52869496 aactttcccatggtgggaaaggattcacctttcccatgtgaacacacacca 52869446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 6862733 - 6862663
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||||||||| || ||| ||||||||| ||||| | ||| |||| ||||||||    
T  6862733 aagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaagattgacctttcc 6862663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 3221424 - 3221473
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  3221424 aactttcccatcgtgggaaaggattcacctttcccatgtgaacacacacc 3221473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 35428238 - 35428278
Alignment:
Q  48 actttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaa 35428278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 20076186 - 20076229
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttc 53  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  20076186 aagaatatgttcttcacttaatctaatcattgaatccaactttc 20076229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 47328397 - 47328466
Alignment:
Q  11 agaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||||||| ||| |||  |||||| |||| || ||||| ||| |||||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttttccatagtaggaaaagatgaacctttcc 47328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 52722080 - 52722158
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||| ||||||||||  |||||   |||||||| ||| ||| |||||||||||||||||||| |||||| |||||    
T  52722080 tgttcttcaattaatctaatggttaaagttaactttcc-atgatggaaaaggattaacctttcccatgtgaacaaacacc 52722158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 18501781 - 18501747
Alignment:
Q  54 ccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||||| ||||    
T  18501781 ccatggtgggaaaggattaacctttcccatgtgaa 18501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 33757470 - 33757421
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||| || |||||||||||||  |||||||||| ||||||||||||    
T  33757470 aactttcctatagtgggaaaggattggcctttcccatatgaacacacacc 33757421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 45778733 - 45778765
Alignment:
Q  56 atggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||| ||||    
T  45778733 atggtgggaaaggattaacctttcccatgtgaa 45778765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 55281921 - 55281835
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  55281921 aagaatatgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 55281835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 29342427 - 29342341
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  29342427 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaacacacacc 29342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3944981 - 3944903
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  3944981 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 3944903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 8427743 - 8427825
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacaca 92  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8427743 aagaatatgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgtgaacaca 8427825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 25025764 - 25025850
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25025764 aagaatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 25025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 44868618 - 44868704
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  44868618 aagaatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 44868704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 32672252 - 32672179
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  32672252 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccat 32672179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 23584323 - 23584237
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  23584323 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaacacacacc 23584237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 23584883 - 23584961
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  23584883 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaa 23584961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 23599146 - 23599060
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  23599146 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaacacacacc 23599060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 23599706 - 23599784
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  23599706 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaa 23599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 31014423 - 31014337
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||| ||| ||||||||||||    
T  31014423 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaacacacacc 31014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 55282421 - 55282484
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaa 73  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55282421 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaa 55282484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 25025260 - 25025182
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||| ||||    
T  25025260 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaa 25025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 50687708 - 50687786
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||    
T  50687708 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaa 50687786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 37374051 - 37373978
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  37374051 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaaagattaacctttcccat 37373978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 19555923 - 19556013
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaat---acaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||||||||||||||| |||   || ||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  19555923 aagaatatgttcttcacttaatctaatcattgaatcctactactttcccatgatgggaaaggattaacctttctcatgtgaacacacacca 19556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 41459204 - 41459130
Alignment:
Q  21 cttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  41459204 cttcacttaatctaatcattgaat-caactttctcatggtgggaaaggattaacctttcccatgtgaacacacacc 41459130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 24220665 - 24220579
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||| |||||| ||| ||| ||| ||||||| |||||| ||||||||||||||| ||||||||||||    
T  24220665 aagaatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgtgaacacacacc 24220579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 31014924 - 31015002
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||| |||||||||||||||| ||||    
T  31014924 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaagattaacctttcccatatgaa 31015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 37375468 - 37375554
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||  |||||||||||||||||||||||||||| | ||||||||||    
T  37375468 aagaagatgttcttcacttaatctaatcatcgaatccaactttcttatggtgggaaaggattaacctttcccatgtaaacacacacc 37375554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 48218677 - 48218591
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| |||| |||||||| |||||||||||| ||| ||||||||||||    
T  48218677 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaaagattaacctttctcatgtgaacacacacc 48218591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 19555356 - 19555288
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaaccttt 78  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||    
T  19555356 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatgatgggaaaagattaaccttt 19555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 42356322 - 42356241
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg---gtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||   ||||||||||||| ||||||||||| ||||    
T  42356322 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggtgggaaaggattgacctttcccatgtgaa 42356241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 50675128 - 50675203
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||  |||||||||||||||||||| ||||    
T  50675128 aatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaa 50675203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 41875616 - 41875702
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||   ||| ||||||| |||||||| ||||||||||||    
T  41875616 aagaatatgttcttcacttaatctaatcattgaacccaactttcccatggtaaaaaatgattaacttttcccatctgaacacacacc 41875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 44868093 - 44868023
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||||    
T  44868093 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaatgattaacctttcc 44868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 47737673 - 47737739
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacct 76  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  47737673 aagaatatgttcttcacttaatctaatcattgaatccaacattcccatggtgggaaatgattaacct 47737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 37374609 - 37374692
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||| | ||||| |||||||| |||| |||||||    
T  37374609 aatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaaggttaacatttcccatgtgaatacacacc 37374692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 37374901 - 37374828
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||     ||||||||||||||||||||||| ||||    
T  37374901 aagaatatgttcttcacttaatctaatcattgaatccaactttccc-----gggaaaggattaacctttcccatgtgaa 37374828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 47737149 - 47737064
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||| |||||||||||||| || ||| |||||| |||| |||||||||||| ||||||||||||| | ||||||||||    
T  47737149 aagaatatgttctccacttaatctaatcgttgaatccaacttaccca-ggtgggaaaggaataacctttcccatattaacacacacc 47737064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 48219235 - 48219308
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||| ||| |||||||||||||||||| ||| ||| |||||||||||| ||||| |||||||||||||||    
T  48219235 aagaatatattcatcacttaatctaatcattgaatccaattttcccatggtgagaaagaattaacctttcccat 48219308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 43658332 - 43658253
Alignment:
Q  18 gttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaa 98  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||  ||||||||||||| || |||| ||||||||||||||    
T  43658332 gttcttcacttaatctaatcattgaat-caactttcccatagtaagaaaggattaaccgtttccatgtgaacacacaccaa 43658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 50674707 - 50674630
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacac 95  Q
    |||||||||| |||||||||||||     ||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  50674707 aatatgttctacacttaatctaat-----aatccaactttcccatggtgggaaaagattaacctttctcatgtgaacacacac 50674630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 38279458 - 38279409
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  38279458 aactttcccatggtgggaaaggattcacctttcccatgtgaacacacacc 38279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 43658895 - 43658943
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  43658895 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 49752913 - 49752968
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaagg 68  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  49752913 aatatattcttcacttaatctaatcattgaatccaactttcccatggtaggaaagg 49752968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 29342993 - 29343041
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  29342993 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 29343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 38575107 - 38575059
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  38575107 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 40887941 - 40887981
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaact 50  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  40887941 aagaatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 49752359 - 49752312
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccat 57  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  49752359 aagaatatgttcttcacttaatctaatcattgaatcctactttcccat 49752312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 32672783 - 32672824
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactt 51  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  32672783 aagaatatgttcttcgcttaatctaatcattaaatccaactt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 43103985 - 43103928
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaag 67  Q
    ||||||||||| ||||||||||| |||| || ||| ||||||||| ||||||||||||    
T  43103985 aagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaag 43103928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 46187033 - 46187082
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||| |||||| ||||||||| ||||||||||| ||||||||||||    
T  46187033 aactttcctatggtgagaaaggattcacctttcccatgtgaacacacacc 46187082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 24221172 - 24221216
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcc 54  Q
    |||||| ||||||||||||||| |||||||||||| |||||||||    
T  24221172 aagaatgtgttcttcacttaatataatcattaaatccaactttcc 24221216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 38575642 - 38575690
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    |||||||||||||||||||||| |||||||| ||| ||||||| |||||    
T  38575642 aagaatatgttcttcacttaatttaatcattgaatccaacttttccatg 38575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 43104513 - 43104572
Alignment:
Q  30 atctaatcattaaatac-aactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||  |||||||| |||||||||||| |||||||||||| ||||||||||| ||||    
T  43104513 atctaatggttaaataccaactttcccatgatgggaaaggattgacctttcccatatgaa 43104572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 53269392 - 53269426
Alignment:
Q  54 ccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||||| ||||    
T  53269392 ccatggtgggaaaggattaacctttcccatgtgaa 53269426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 49161910 - 49161866
Alignment:
Q  53 cccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||||||| ||||||||||  |||||||||| |||||||||||||    
T  49161910 cccatggtaggaaaggattctcctttcccatgtgaacacacacca 49161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 28224388 - 28224474
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28224388 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 28224474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 6849371 - 6849288
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6849371 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 6849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 16887669 - 16887583
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  16887669 aagaatatgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgtgaacacacacc 16887583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 3595332 - 3595245
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  3595332 aagaatatgttcttcactttatctaatcattgaatccaactttcccatggtgggaaagaattaacctttcccatgtgaacacacacca 3595245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 10883373 - 10883290
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacac 93  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  10883373 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacac 10883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 39477325 - 39477408
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacac 93  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39477325 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatatgaacacac 39477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 4386960 - 4387038
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  4386960 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 4387038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 9224352 - 9224274
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  9224352 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 9224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7716757 - 7716679
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  7716757 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtgaa 7716679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7717285 - 7717370
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  7717285 aagaatatgttcttcacttaatataatcattgaat-caactttcccatggtgagaaaggattaacctttcccatgtgaacacacacc 7717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16571204 - 16571126
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  16571204 aagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 16571126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 16571726 - 16571812
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||| ||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  16571726 aagaatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgtgaacacacacc 16571812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 20244171 - 20244249
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  20244171 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 20244249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28223874 - 28223796
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  28223874 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaa 28223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 6849545 - 6849615
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  6849545 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccat 6849615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 7583218 - 7583132
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||||||||||| || ||||||||||||    
T  7583218 aagaatatgttcttcacctaatctaatcattgaatccaattttctcatggtgggaaaggattaacctttccgatgtgaacacacacc 7583132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 11256202 - 11256120
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacaca 92  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||||||||| ||||||||    
T  11256202 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgtgaacaca 11256120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 40166846 - 40166929
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  40166846 aatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgtgagcacacacc 40166929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7583793 - 7583871
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||| |||||||||||||||| ||||    
T  7583793 aagaatatgttcttcacttaagctaatcattgaatccaactttcccatagtgggaaaagattaacctttcccatgtgaa 7583871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8113300 - 8113378
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||| ||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  8113300 aagaatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 8113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 30162019 - 30161947
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttccca 82  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||||    
T  30162019 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttccca 30161947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 8112754 - 8112680
Alignment:
Q  22 ttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||| ||| ||||||||||||    
T  8112754 ttcacttaatctaatcattgaatccaactttcccatggtgagaaaggattaacatttctcatgtgaacacacacc 8112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 16903092 - 16903162
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||||    
T  16903092 aatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccat 16903162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 20243639 - 20243579
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggat 70  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  20243639 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggat 20243579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 4386422 - 4386355
Alignment:
Q  29 aatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  4386422 aatctaatcattgaatccaactttcctatggtgggaaagtattaacctttcccatgtgaacacacacc 4386355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 8963587 - 8963512
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| | | |||||||||||||||||||| ||||    
T  8963587 aatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtgaa 8963512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 39476601 - 39476534
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctt 77  Q
    |||||||| |||||||||||||||||||||| |||  ||||||||||| |||||||||||||||||||    
T  39476601 aagaatatattcttcacttaatctaatcattgaattaaactttcccatagtgggaaaggattaacctt 39476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 11256740 - 11256813
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||| |||||||||||||||||||||| ||| |||||||| |||||||| ||| ||||||||||| ||||    
T  11256740 aagaatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaaatgattaaccttttccat 11256813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3595895 - 3595973
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| ||||| ||  ||||||||||| |||||||| ||||    
T  3595895 aagaatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtgaa 3595973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 33847959 - 33847881
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||  || ||| || |||||||||||||| ||||||||  |||||||||| ||||    
T  33847959 aagaatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaaaggattggcctttcccatgtgaa 33847881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40165959 - 40165881
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||| ||||   ||||||||| ||||    
T  40165959 aagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaaatgattggtctttcccatgtgaa 40165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 467191 - 467134
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaag 67  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||    
T  467191 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtggaaaag 467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 467341 - 467412
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttccc 81  Q
    |||||||||||||||||||||| |||| ||| ||| |||||||  || ||||| ||| ||||||||||||||    
T  467341 aagaatatgttcttcacttaatttaattattgaattcaactttttcacggtggaaaatgattaacctttccc 467412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 12206838 - 12206796
Alignment:
Q  46 caactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  12206838 caactttctcatggtgggaaaggattaacctttcccatgtgaa 12206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 17918107 - 17918021
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||| |||||||||||||||||||||| |||  |||||| ||||   |  |||||||||||||||| ||| | ||||||||||    
T  17918107 aagaatatattcttcacttaatctaatcattgaatctaacttttccataaagaaaaaggattaacctttctcatgtaaacacacacc 17918021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 12207385 - 12207464
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaac-tttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||| |||||||||| |||||| ||||||||||| |||| |||||| |||||| ||||| || || |||||||| ||||    
T  12207385 aagaacatgttcttcatttaatccaatcattaaattcaacttttcccgtggtggaaaagggttgacttttcccatatgaa 12207464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 18950534 - 18950573
Alignment:
Q  49 ctttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  18950534 ctttcccatggtgggaaaggattaaccttttccatatgaa 18950573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 43743842 - 43743880
Alignment:
Q  50 tttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  43743842 tttcccatggtgggaaaggattcacctttcccatgtgaa 43743880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 14565214 - 14565247
Alignment:
Q  50 tttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||||||||||||||||| |||||||||||    
T  14565214 tttcccatggtgggaaaggattcacctttcccat 14565247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 32471988 - 32471952
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||||||||||||||  |||||||||||    
T  32471988 aactttcccatggtgggaaaggatccacctttcccat 32471952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 11998542 - 11998447
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaataaattg 105  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||    
T  11998542 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacctaaaaattg 11998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 43591093 - 43591007
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43591093 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 43591007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7818560 - 7818482
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  7818560 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 7818482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 33114188 - 33114266
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  33114188 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 33114266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 39852240 - 39852162
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  39852240 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttgaa 39852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 40907684 - 40907599
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  40907684 aagaatatgttcttcacttaatctaatcattgaat-caactttcccgtggtgggaaaggattaacctttcccatgtgaacacacacc 40907599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 43481284 - 43481369
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaa 98  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  43481284 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttttcatgtgaacacacaccaa 43481369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16889281 - 16889203
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  16889281 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaa 16889203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 30115996 - 30116082
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||| ||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  30115996 aagaatatattctttacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaacacacacc 30116082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 35237345 - 35237267
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  35237345 aagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 35237267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 36848197 - 36848283
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||| ||||||||| ||||||||||||    
T  36848197 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaacacacacc 36848283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 44062071 - 44061985
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  44062071 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgtgaacacacacc 44061985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7819097 - 7819183
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||| |||||| ||||||||| ||||||||||||    
T  7819097 aagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtgaacacacacc 7819183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 11999080 - 11999158
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  11999080 aagaatatgttcttcacttcatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 11999158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 16889828 - 16889913
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  16889828 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtgggaaatgattaacc-ttcccatgtgaacacacacc 16889913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 16880518 - 16880599
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacac 91  Q
    ||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||| ||||||||| |||||||    
T  16880518 aagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtgaacac 16880599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 4373772 - 4373680
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaataaa 102  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||| ||| ||||||| ||||||| |||||||| |||||||||||| |||||    
T  4373772 aagaatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgtgaacacacacctataaa 4373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 38778240 - 38778172
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaaccttt 78  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  38778240 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaaccttt 38778172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 30115453 - 30115386
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctt 77  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  30115453 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctt 30115386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 35237865 - 35237947
Alignment:
Q  11 agaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacaca 94  Q
    |||||||||||||||||||||||||| ||| ||| ||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaat-caacttttctatggtgggaaaggattaacctttcccatgtgaacacaca 35237947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 43480702 - 43480624
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||  ||| |||||||||||||||| ||||    
T  43480702 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtgaa 43480624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 33113661 - 33113588
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||    
T  33113661 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaatctttcccat 33113588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 38778798 - 38778882
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||| ||| ||||||| |||||    
T  38778798 aatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgtgaacacccacca 38778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 40309500 - 40309568
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaaccttt 78  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||    
T  40309500 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaatgattaaccttt 40309568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 43591616 - 43591694
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||  ||||||||||||||| ||||    
T  43591616 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtgaa 43591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 44062599 - 44062666
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcc 80  Q
    ||||| |||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  44062599 aatatattctccacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcc 44062666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 10806437 - 10806515
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||| ||||||| |||||||| |||  |||||||||||||| ||||| |||||||||||||||| ||||    
T  10806437 aagaatatgttctttacttaatttaatcattgaatcaaactttcccatggtaggaaaagattaacctttcccatgtgaa 10806515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16879974 - 16879896
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||| | ||||| ||||||| |||||||| ||||    
T  16879974 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatgataggaaatgattaacttttcccatgtgaa 16879896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 39852803 - 39852889
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||| |||||||||||||||||| ||| |||  ||||||   |||||||||||||||||||||||| ||| ||||||||||||    
T  39852803 aagaatatattcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgtgaacacacacc 39852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2209092 - 2209032
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggat 70  Q
    ||||||||||| ||||||||||||||||||| |||  ||||||| ||||||||||||||||    
T  2209092 aagaatatgttattcacttaatctaatcattgaatcgaactttctcatggtgggaaaggat 2209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 4374301 - 4374349
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  4374301 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 4374995 - 4375070
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||| ||||||| ||| |||||||| |||||||| ||| |||| | ||||||||| ||||    
T  4374995 aatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaaatgattcatctttcccatatgaa 4375070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 37533323 - 37533364
Alignment:
Q  56 atggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  37533323 atggtgggaaaggattaacctttcccatgtgaacacacacca 37533364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 10806034 - 10805987
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccat 57  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  10806034 aagaatatgttcttcatttaatctaatcattgaatccaactttcccat 10805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 41761848 - 41761807
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  41761848 aactgtcccatggtgggaaaggattaacctttcccatgtgaa 41761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 38572301 - 38572235
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||| ||||||||||  || ||   |||||||||||||||||||| |||| |||||||||||    
T  38572301 tgttcttcaattaatctaatggtttaagttaactttcccatggtgggaaaagattgacctttcccat 38572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 37532617 - 37532584
Alignment:
Q  55 catggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||| ||||    
T  37532617 catggtgggaaaggattaacctttcccatgtgaa 37532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 6032244 - 6032158
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  6032244 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaacacacacc 6032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 5523286 - 5523201
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacac 95  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  5523286 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaacacacac 5523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 12809155 - 12809069
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    |||||||||||||||||||||||||||||||  || ||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  12809155 aagaatatgttcttcacttaatctaatcattgcatccaactttcctatagtgggaaaggattaacctttcccatgtgaacacacacc 12809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 31723919 - 31723846
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  31723919 aagaatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccat 31723846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 30610797 - 30610711
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||||||||||  |||||||||||    
T  30610797 aagaatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaaatgattaacctttcccatgcgaacacacacc 30610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 33668307 - 33668229
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  33668307 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 33668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 13944376 - 13944289
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||| |||||| ||||||||| |||||||| ||||    
T  13944376 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcccatatgaacacatacca 13944289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 5523846 - 5523924
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| |||||||||||||||| ||||    
T  5523846 aagaatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtgaa 5523924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 12809702 - 12809780
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||   |||||||||||||||||||||||| ||||    
T  12809702 aagaatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtgaa 12809780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 13936640 - 13936718
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||| |||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||| ||||    
T  13936640 aagaatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaa 13936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 30611345 - 30611423
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||| ||||    
T  30611345 aagaatatgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtgaa 30611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 33668833 - 33668917
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||| |||||||||||||||||||||| ||| ||||||| | ||||||||||| ||||||| ||||| || |||||||||||||    
T  33668833 aatatattcttcacttaatctaatcattgaatccaacttttctatggtgggaaatgattaacatttccaatgtgaacacacacca 33668917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 6032753 - 6032831
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| |||  ||||||| ||||||| ||||  |||||||||| |||| ||||    
T  6032753 aagaatatgttcttcacttaatctaatcattgaatctaactttctcatggtgagaaaaaattaaccttttccatatgaa 6032831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 33648163 - 33648241
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| |||||||||||||  ||||||| ||| ||| ||||| |||||| ||||| ||| ||||||||||| ||||    
T  33648163 aagaatatattcttcacttaattcaatcattgaatccaattttcctatggtgtgaaagaattgacctttcccatgtgaa 33648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3957586 - 3957508
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  3957586 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 3957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 4928957 - 4928871
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| |||||||| ||||||||||||    
T  4928957 aagaatatgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgtgaacacacacc 4928871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 26687586 - 26687500
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  26687586 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaacacacacc 26687500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 26957317 - 26957231
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  26957317 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaacacacacc 26957231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 21770084 - 21769994
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaat----acaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||||||||||||||||||||||||| |||     ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  21770084 aagaatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaaaggattaacctttcccatatgaacacacacc 21769994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 4929509 - 4929584
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  4929509 aatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 4929584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8813683 - 8813761
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||    
T  8813683 aagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatgaa 8813761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 3739663 - 3739751
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaa 98  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||| || ||||||||||||  ||||| || ||||||||||||||    
T  3739663 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagtaggaaaggattaagttttcctatgtgaacacacaccaa 3739751  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 5324403 - 5324481
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||||  ||||| ||||||||||||||| ||||    
T  5324403 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaa 5324481  T

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Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 33430128 - 33430051
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||| ||||    
T  33430128 aagaatatgttcttcacttaatctaatcattgaatccaacttt-ccatggtaggaaaggattaaccttttccatgtgaa 33430051  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 3958137 - 3958216
Alignment:
Q  13 aatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacaca 92  Q
    |||||||||||||||||||||||| ||| |||  ||||||||  || |||||||||||||||||||||||| ||||||||    
T  3958137 aatatgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgtgaacaca 3958216  T

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Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28075969 - 28076047
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||| |||| ||||    
T  28075969 aagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtgaa 28076047  T

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Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 42408078 - 42407986
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaataaa 102  Q
    |||||||||||||||| |||||||||||||| ||| ||| |||||||| |||||||| |||||||||| |  ||  ||| |||||||||||||    
T  42408078 aagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaaagattaaccttcctgatacgaagacacaccaataaa 42407986  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 8813127 - 8813078
Alignment:
Q  46 caactttcccatggtgggaaaggattaacctttcccatttgaacacacac 95  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  8813127 caactttcccatggtgggagaggattaacctttcccatatgaacacacac 8813078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 5324368 - 5324304
Alignment:
Q  32 ctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacc 96  Q
    ||||||||| ||| ||||||||||||| | |||||||||||| ||||||||| ||||||||||||    
T  5324368 ctaatcattgaatccaactttcccatgataggaaaggattaagctttcccatgtgaacacacacc 5324304  T

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Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25075004 - 25075070
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||| ||||||||||   ||||   |||||||||||||||||||||||||||||||||||||    
T  25075004 tgttcttcaattaatctaatggctaaagttaactttcccatggtgggaaaggattaacctttcccat 25075070  T

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Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 25132973 - 25133039
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccat 83  Q
    ||||||||| ||||||||||   ||||   |||||||||||||||||||||||||||||||||||||    
T  25132973 tgttcttcaattaatctaatggctaaagttaactttcccatggtgggaaaggattaacctttcccat 25133039  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 42408565 - 42408613
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  42408565 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 42408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 13738146 - 13738099
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccat 57  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  13738146 aagaatatgttcttcacttaatccaatcattgaatccaactttcccat 13738099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 39148817 - 39148763
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaacacacaccaataa 101  Q
    |||||||||||||||| |||| ||| ||||||||||| |||||||||||| ||||    
T  39148817 aactttcccatggtggaaaagaattcacctttcccatatgaacacacacctataa 39148763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 39149468 - 39149509
Alignment:
Q  47 aactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  39149468 aactttcccatggtgggaaaggattcacctttcccatgtgaa 39149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 3739086 - 3739038
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatg 58  Q
    |||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  3739086 aagaatatatttttcacttaatctaatcattgaatccaactttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 25074362 - 25074291
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||| ||||||||||  ||||||  |||||||||||||||| ||| |||||||| || |||| ||||    
T  25074362 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25074291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 25132331 - 25132260
Alignment:
Q  17 tgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||| ||||||||||  ||||||  |||||||||||||||| ||| |||||||| || |||| ||||    
T  25132331 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25132260  T

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Target: scaffold0229 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 15233 - 15311
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  15233 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaa 15311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 1571 - 1484
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaacacacacca 97  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||| |||||||| |||| |||||| ||||||||| |||||||||||||    
T  1571 aagaatatgttattcacttaatctaatcattgaatccaacttttccatggtgcgaaatgattaagctttcccatgtgaacacacacca 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11351 - 11274
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||| ||||    
T  11351 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggt-ggaaaagattaacctttcccatgtgaa 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 11784 - 11862
Alignment:
Q  10 aagaatatgttcttcacttaatctaatcattaaatacaactttcccatggtgggaaaggattaacctttcccatttgaa 88  Q
    |||||||||||||||||||||||| |||||| | |  |||||||||||||||||||||||||||||||| |||| ||||    
T  11784 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaa 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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