View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18568_high_9 (Length: 237)
Name: NF18568_high_9
Description: NF18568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18568_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 10 - 222
Target Start/End: Original strand, 45540596 - 45540808
Alignment:
| Q |
10 |
aataacagtgactccgatgatgtagttaaatcatggcaaacccagccatctccatgtgatattgtatcaacaaatgttgaatcacatcacccctttaaag |
109 |
Q |
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| T |
45540596 |
aataacagtgactccgatgatgtagttaaatcatggcaaacccagccatctccatgtgatattgtatcaacaaatgttgaatcacatcacccctttaaag |
45540695 |
T |
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| Q |
110 |
aaattgagaaaggacaacagggagtggatgatactatccatacggggacatcatcttttccaactttagaaccattaaaccaagaacaaacgtgcgcttc |
209 |
Q |
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| T |
45540696 |
aaattgagaaaggacaacagggagtggatgatactatccatacagggacatcatcttttccaactttagaatcattaaaccaagaacaaacgtgcgcttc |
45540795 |
T |
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| Q |
210 |
tataaatgtcaca |
222 |
Q |
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| T |
45540796 |
tataaatgtcaca |
45540808 |
T |
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