View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1856_low_21 (Length: 217)
Name: NF1856_low_21
Description: NF1856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1856_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 23330669 - 23330859
Alignment:
| Q |
15 |
aaaatacatgtgactgtgtaagctttgcgttgtgcaccgtcgaaggttgacccttaattctgcaatttctactaaatattataatttgttgtatacgttg |
114 |
Q |
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| T |
23330669 |
aaaatacatgtgactgtgtaagctttgcgttgtgcaccgtcgaaggttgacccttaattctgcaatttctactaaatattataatttgttgtatacgttg |
23330768 |
T |
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| Q |
115 |
ttttgtgaccgacgagttctttgtcctcttagaatcacattataattagtataattgttatgatgtgtactttaataagtatagttcaatt |
205 |
Q |
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| T |
23330769 |
ttttgtgaccgacgagttctttgtcctcttagaatcacattataattagtataattgttatgatgtgtactttaataagtatagttcaatt |
23330859 |
T |
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