View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18572_low_2 (Length: 360)

Name: NF18572_low_2
Description: NF18572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18572_low_2
NF18572_low_2
[»] chr3 (48 HSPs)
chr3 (1-360)||(26274986-26275346)
chr3 (233-360)||(5136978-5137106)
chr3 (235-360)||(41046700-41046826)
chr3 (233-360)||(31779071-31779199)
chr3 (232-360)||(20840557-20840686)
chr3 (238-360)||(23644465-23644588)
chr3 (238-360)||(25853646-25853769)
chr3 (238-360)||(39555996-39556119)
chr3 (259-360)||(48453013-48453115)
chr3 (232-360)||(17464488-17464617)
chr3 (233-360)||(4275783-4275911)
chr3 (229-360)||(29801835-29801967)
chr3 (238-360)||(23644884-23645007)
chr3 (234-360)||(26274566-26274693)
chr3 (238-360)||(43973444-43973567)
chr3 (239-360)||(22425232-22425354)
chr3 (231-360)||(43973859-43973989)
chr3 (238-360)||(20840980-20841103)
chr3 (238-360)||(25853237-25853360)
chr3 (238-360)||(27393664-27393787)
chr3 (234-360)||(32534958-32535085)
chr3 (238-360)||(37727349-37727472)
chr3 (231-360)||(24300975-24301105)
chr3 (235-360)||(25612396-25612522)
chr3 (238-360)||(30098182-30098305)
chr3 (238-360)||(37726932-37727055)
chr3 (238-360)||(39555581-39555704)
chr3 (267-360)||(22424846-22424940)
chr3 (238-354)||(32535383-32535505)
chr3 (238-360)||(17464910-17465034)
chr3 (264-360)||(41047118-41047214)
chr3 (233-360)||(26837358-26837486)
chr3 (231-354)||(30104478-30104602)
chr3 (238-360)||(31778656-31778779)
chr3 (238-360)||(50116828-50116951)
chr3 (238-355)||(29801359-29801477)
chr3 (238-354)||(32697125-32697242)
chr3 (238-360)||(23228427-23228549)
chr3 (238-360)||(27393996-27394119)
chr3 (232-342)||(5137419-5137529)
chr3 (231-360)||(26837775-26837904)
chr3 (259-360)||(51474753-51474855)
chr3 (234-337)||(24300556-24300658)
chr3 (238-360)||(25420560-25420683)
chr3 (238-337)||(51473431-51473530)
chr3 (291-360)||(18010164-18010234)
chr3 (292-360)||(37220614-37220683)
chr3 (292-360)||(45965995-45966064)
[»] chr1 (38 HSPs)
chr1 (238-360)||(29306956-29307079)
chr1 (238-360)||(5540237-5540360)
chr1 (234-360)||(5962997-5963124)
chr1 (233-360)||(18984117-18984245)
chr1 (238-360)||(15646614-15646737)
chr1 (238-360)||(50970697-50970820)
chr1 (233-351)||(15646190-15646309)
chr1 (238-360)||(17433634-17433757)
chr1 (238-360)||(18984538-18984661)
chr1 (234-360)||(15173095-15173222)
chr1 (233-359)||(26859479-26859606)
chr1 (238-360)||(29869623-29869746)
chr1 (238-360)||(33144338-33144461)
chr1 (238-351)||(8678544-8678658)
chr1 (231-360)||(9018969-9019099)
chr1 (238-351)||(26859062-26859176)
chr1 (238-360)||(5539819-5539942)
chr1 (246-360)||(29307361-29307476)
chr1 (238-360)||(29870038-29870161)
chr1 (264-358)||(39154048-39154143)
chr1 (233-351)||(50970276-50970395)
chr1 (228-360)||(17433209-17433342)
chr1 (228-351)||(8678969-8679093)
chr1 (233-360)||(15173513-15173640)
chr1 (238-360)||(4636390-4636513)
chr1 (246-360)||(33143928-33144043)
chr1 (238-360)||(39154439-39154562)
chr1 (238-342)||(21856045-21856149)
chr1 (238-360)||(21856462-21856585)
chr1 (238-360)||(52268293-52268416)
chr1 (231-360)||(9019382-9019512)
chr1 (264-335)||(47827033-47827104)
chr1 (231-321)||(2733416-2733506)
chr1 (273-360)||(5962616-5962704)
chr1 (291-360)||(17112337-17112407)
chr1 (295-360)||(4636033-4636098)
chr1 (238-310)||(47826967-47827039)
chr1 (291-350)||(52269177-52269237)
[»] scaffold0295 (2 HSPs)
scaffold0295 (232-360)||(4790-4919)
scaffold0295 (238-348)||(5222-5333)
[»] chr7 (26 HSPs)
chr7 (233-360)||(19830418-19830546)
chr7 (233-360)||(35289320-35289448)
chr7 (238-360)||(19590528-19590651)
chr7 (233-360)||(34534210-34534338)
chr7 (238-360)||(37786770-37786893)
chr7 (231-360)||(19590944-19591074)
chr7 (231-360)||(37787186-37787316)
chr7 (231-360)||(38859060-38859190)
chr7 (234-360)||(4641439-4641566)
chr7 (234-360)||(29100270-29100397)
chr7 (238-360)||(32005033-32005156)
chr7 (238-360)||(19830839-19830961)
chr7 (259-360)||(29099874-29099976)
chr7 (264-360)||(28584341-28584438)
chr7 (233-360)||(4478119-4478247)
chr7 (223-350)||(35288892-35289019)
chr7 (246-360)||(38858654-38858769)
chr7 (264-360)||(2659259-2659356)
chr7 (232-351)||(23952727-23952848)
chr7 (233-360)||(2658837-2658965)
chr7 (269-360)||(23953148-23953240)
chr7 (233-360)||(32004612-32004740)
chr7 (233-360)||(34533789-34533917)
chr7 (229-360)||(38160945-38161077)
chr7 (238-350)||(4641873-4641983)
chr7 (233-360)||(28583437-28583565)
[»] chr2 (36 HSPs)
chr2 (233-360)||(22374318-22374446)
chr2 (231-360)||(40815764-40815894)
chr2 (233-360)||(11090519-11090647)
chr2 (231-360)||(26538498-26538628)
chr2 (238-360)||(28616616-28616739)
chr2 (238-360)||(35781082-35781205)
chr2 (232-360)||(239350-239478)
chr2 (233-360)||(1978528-1978656)
chr2 (238-360)||(40027143-40027266)
chr2 (231-360)||(18451250-18451380)
chr2 (228-360)||(22374744-22374877)
chr2 (233-360)||(1978106-1978234)
chr2 (238-360)||(20444752-20444875)
chr2 (238-360)||(26538100-26538223)
chr2 (234-360)||(40027559-40027686)
chr2 (238-360)||(43058336-43058459)
chr2 (231-360)||(7446765-7446895)
chr2 (233-349)||(11090950-11091067)
chr2 (229-360)||(43058752-43058883)
chr2 (232-354)||(3025463-3025586)
chr2 (238-360)||(28617033-28617156)
chr2 (238-360)||(40815348-40815471)
chr2 (235-360)||(14432142-14432268)
chr2 (232-360)||(8425352-8425480)
chr2 (231-359)||(20440451-20440580)
chr2 (237-360)||(8425779-8425903)
chr2 (238-360)||(18450833-18450956)
chr2 (246-360)||(239771-239886)
chr2 (233-351)||(28847123-28847242)
chr2 (238-360)||(35779711-35779834)
chr2 (238-354)||(7446345-7446462)
chr2 (238-360)||(8972240-8972363)
chr2 (238-360)||(15551502-15551625)
chr2 (238-360)||(14432560-14432683)
chr2 (259-360)||(3025882-3025983)
chr2 (291-360)||(15552473-15552543)
[»] chr6 (33 HSPs)
chr6 (238-360)||(15828060-15828183)
chr6 (232-360)||(2319669-2319798)
chr6 (238-360)||(10900349-10900472)
chr6 (238-360)||(18505338-18505461)
chr6 (238-360)||(31470735-31470858)
chr6 (227-360)||(11277001-11277135)
chr6 (232-360)||(12935154-12935283)
chr6 (233-360)||(18257135-18257263)
chr6 (233-360)||(20741098-20741226)
chr6 (233-360)||(23075547-23075675)
chr6 (230-360)||(11445406-11445537)
chr6 (238-360)||(31470318-31470441)
chr6 (231-360)||(22219772-22219902)
chr6 (237-360)||(10899941-10900065)
chr6 (238-360)||(1149851-1149974)
chr6 (233-360)||(12935576-12935704)
chr6 (231-360)||(11444983-11445113)
chr6 (238-351)||(18257565-18257679)
chr6 (236-360)||(2322637-2322762)
chr6 (236-360)||(18504920-18505045)
chr6 (238-342)||(4811694-4811798)
chr6 (227-354)||(28472629-28472757)
chr6 (227-354)||(29859818-29859946)
chr6 (264-360)||(4811401-4811498)
chr6 (234-360)||(3835145-3835272)
chr6 (238-332)||(23074002-23074096)
chr6 (238-360)||(29033437-29033560)
chr6 (233-323)||(1149463-1149553)
chr6 (238-360)||(15827641-15827766)
chr6 (238-332)||(20741552-20741646)
chr6 (291-354)||(18296201-18296265)
chr6 (238-360)||(29035056-29035179)
chr6 (259-360)||(11276614-11276716)
[»] chr8 (27 HSPs)
chr8 (229-360)||(19176709-19176841)
chr8 (231-360)||(11656451-11656581)
chr8 (233-354)||(41681132-41681254)
chr8 (230-360)||(12571858-12571990)
chr8 (238-360)||(13225058-13225181)
chr8 (234-352)||(33328157-33328276)
chr8 (238-351)||(41681562-41681676)
chr8 (233-360)||(31133218-31133346)
chr8 (235-360)||(12572270-12572396)
chr8 (259-360)||(13224665-13224766)
chr8 (232-360)||(19176287-19176416)
chr8 (238-360)||(9930076-9930199)
chr8 (238-360)||(11656876-11656999)
chr8 (238-351)||(9928912-9929026)
chr8 (231-360)||(34540967-34541097)
chr8 (238-360)||(31133639-31133762)
chr8 (238-360)||(33328559-33328682)
chr8 (238-360)||(44831250-44831373)
chr8 (238-354)||(9178060-9178177)
chr8 (232-360)||(44831664-44831793)
chr8 (231-360)||(33742918-33743047)
chr8 (293-360)||(33743338-33743406)
chr8 (242-331)||(8074000-8074089)
chr8 (259-360)||(4629821-4629923)
chr8 (233-342)||(11336960-11337069)
chr8 (295-360)||(10918186-10918252)
chr8 (229-360)||(4630211-4630337)
[»] chr4 (51 HSPs)
chr4 (233-360)||(54995067-54995195)
chr4 (238-360)||(12234748-12234871)
chr4 (232-350)||(23494872-23494991)
chr4 (238-360)||(25938090-25938213)
chr4 (238-360)||(45082843-45082966)
chr4 (238-360)||(46193824-46193947)
chr4 (234-360)||(48526600-48526727)
chr4 (232-360)||(20470930-20471059)
chr4 (233-360)||(25447655-25447783)
chr4 (238-360)||(2118296-2118419)
chr4 (238-360)||(4219560-4219683)
chr4 (238-360)||(11153566-11153689)
chr4 (226-360)||(12234320-12234455)
chr4 (238-360)||(25447250-25447373)
chr4 (238-360)||(33109687-33109810)
chr4 (234-354)||(2118720-2118841)
chr4 (233-360)||(15523233-15523361)
chr4 (233-360)||(54995487-54995614)
chr4 (238-360)||(11153149-11153272)
chr4 (234-360)||(18751598-18751725)
chr4 (238-348)||(18763951-18764062)
chr4 (238-360)||(22434182-22434305)
chr4 (238-360)||(23494446-23494569)
chr4 (238-360)||(38962238-38962361)
chr4 (238-360)||(46193408-46193531)
chr4 (231-360)||(4219978-4220108)
chr4 (231-360)||(25937666-25937796)
chr4 (231-360)||(51020793-51020923)
chr4 (230-354)||(22434602-22434726)
chr4 (238-360)||(15523653-15523776)
chr4 (233-360)||(33109883-33110011)
chr4 (259-354)||(43243705-43243801)
chr4 (233-360)||(48713765-48713893)
chr4 (233-360)||(51021215-51021342)
chr4 (264-354)||(20958285-20958375)
chr4 (259-360)||(43281210-43281311)
chr4 (238-354)||(48526199-48526316)
chr4 (232-354)||(45082429-45082551)
chr4 (264-360)||(20957218-20957315)
chr4 (293-360)||(22170356-22170424)
chr4 (234-360)||(16690935-16691062)
chr4 (238-360)||(44892567-44892690)
chr4 (293-360)||(12503494-12503562)
chr4 (225-351)||(35363028-35363155)
chr4 (233-337)||(48708293-48708397)
chr4 (238-360)||(44890520-44890643)
chr4 (293-360)||(43242328-43242396)
chr4 (233-360)||(48293592-48293720)
chr4 (238-360)||(16691491-16691613)
chr4 (303-360)||(12503855-12503913)
chr4 (269-360)||(48294961-48295054)
[»] chr5 (39 HSPs)
chr5 (231-360)||(18183388-18183518)
chr5 (233-360)||(2865174-2865302)
chr5 (233-360)||(18182968-18183096)
chr5 (238-360)||(5819348-5819471)
chr5 (230-354)||(15708966-15709091)
chr5 (238-360)||(8647441-8647564)
chr5 (238-360)||(19359139-19359262)
chr5 (231-360)||(164610-164740)
chr5 (224-360)||(19359555-19359692)
chr5 (233-360)||(5818927-5819055)
chr5 (233-360)||(24362255-24362383)
chr5 (238-360)||(2864757-2864880)
chr5 (231-342)||(15372311-15372422)
chr5 (238-360)||(29455161-29455284)
chr5 (264-360)||(8460959-8461056)
chr5 (231-351)||(8647866-8647987)
chr5 (238-360)||(14215244-14215367)
chr5 (257-360)||(29454762-29454866)
chr5 (232-360)||(14215662-14215791)
chr5 (264-360)||(24361866-24361963)
chr5 (238-360)||(8461350-8461473)
chr5 (264-360)||(24325241-24325338)
chr5 (264-360)||(25000508-25000605)
chr5 (238-354)||(4222147-4222264)
chr5 (268-360)||(4624644-4624737)
chr5 (233-353)||(14463946-14464067)
chr5 (269-360)||(7348593-7348685)
chr5 (238-360)||(164194-164316)
chr5 (238-360)||(7349436-7349559)
chr5 (238-360)||(15709388-15709510)
chr5 (231-326)||(24331555-24331650)
chr5 (269-360)||(6019189-6019282)
chr5 (238-347)||(15371874-15371983)
chr5 (259-360)||(25000114-25000216)
chr5 (269-337)||(6018348-6018415)
chr5 (238-354)||(4219666-4219783)
chr5 (293-358)||(24331981-24332049)
chr5 (233-360)||(16019006-16019134)
chr5 (294-353)||(4623207-4623267)
[»] scaffold0019 (1 HSPs)
scaffold0019 (229-360)||(134092-134224)
[»] scaffold0951 (2 HSPs)
scaffold0951 (233-360)||(1665-1793)
scaffold0951 (232-360)||(2086-2215)
[»] scaffold0273 (2 HSPs)
scaffold0273 (233-360)||(4626-4754)
scaffold0273 (274-360)||(4242-4329)
[»] scaffold0432 (2 HSPs)
scaffold0432 (238-354)||(10297-10414)
scaffold0432 (237-360)||(9934-10057)
[»] scaffold1223 (2 HSPs)
scaffold1223 (238-360)||(756-878)
scaffold1223 (238-360)||(1160-1283)
[»] scaffold0417 (2 HSPs)
scaffold0417 (238-360)||(11042-11165)
scaffold0417 (259-360)||(10645-10747)
[»] scaffold0007 (2 HSPs)
scaffold0007 (238-360)||(64305-64428)
scaffold0007 (234-349)||(64735-64851)
[»] scaffold1585 (1 HSPs)
scaffold1585 (238-336)||(570-668)
[»] scaffold0113 (1 HSPs)
scaffold0113 (259-360)||(28662-28764)
[»] scaffold0027 (2 HSPs)
scaffold0027 (229-354)||(42583-42709)
scaffold0027 (234-342)||(42168-42276)
[»] scaffold0176 (2 HSPs)
scaffold0176 (241-354)||(18841-18955)
scaffold0176 (238-332)||(19069-19163)
[»] scaffold0057 (2 HSPs)
scaffold0057 (236-360)||(61877-62002)
scaffold0057 (227-318)||(61020-61111)
[»] scaffold1696 (1 HSPs)
scaffold1696 (259-350)||(473-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (291-360)||(7707-7777)
[»] scaffold0076 (1 HSPs)
scaffold0076 (235-337)||(8452-8554)
[»] scaffold0157 (2 HSPs)
scaffold0157 (293-360)||(16915-16983)
scaffold0157 (303-360)||(16564-16622)


Alignment Details
Target: chr3 (Bit Score: 296; Significance: 1e-166; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 26275346 - 26274986
Alignment:
Q  1 tgtactttcccattgatcaaatggaaaacattttggcgccacgtgtcttttccattagtaatgactaatggggtgctgatgattggtttgtttgtaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26275346 tgtactttcccattgatcaaatggaaaacattttggcgccacgtgtcttttccattagtaatgactaatggggtgctgatgattggtttgtttgtaaaga 26275247  T
Q  101 aaaaa-ggaagttagttggaagaaacgaagagggttaaagttaaatgtatgaaaagctatatatgaagacnnnnnnngggagaaaaggacatcggaagag 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  26275246 aaaaaaggaagttagttggaagaaacgaagagggttaaagttaaatgtatgaaaagctatatatgaagacaaaaaaagggagaaaaggacatcggaagag 26275147  T
Q  200 ggaagaaaatgaaataaaggatgaatatttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaa 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||| ||||||||||||||||||| || |||||||||    
T  26275146 ggaagaaaatgaaataaaggatgaatatttatttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaa 26275047  T
Q  300 acagaacaaaacagtccctcaattatcatttttgttgctttttcgtcctaccccccatttt 360  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26275046 acagaataaaacggtccctcaattatcatttttgttgctttttcgtcctaccccccatttt 26274986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 5136978 - 5137106
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||| |||||| |||||||||| |||||||  ||||||||||||||||||||| |||| |||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt 5137106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 41046700 - 41046826
Alignment:
Q  235 ggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgt 334  Q
    |||||||||| |||||||  ||| |||| |||||||| | ||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||||    
T  41046700 ggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41046799  T
Q  335 tgc-tttttcgtcctaccccccatttt 360  Q
    ||| |||||||||||||||||||||||    
T  41046800 tgcatttttcgtcctaccccccatttt 41046826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 31779199 - 31779071
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||| ||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt 31779071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 20840557 - 20840686
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | |||||||| |||||||||| |||| ||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccatttt 20840686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 23644465 - 23644588
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| || | ||||||||||||||||| ||||| |  | |||||||||||||||||||||||| ||||||||||||||||||||    
T  23644465 ttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgc 23644564  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  23644565 atttttcgtcctaccccccatttt 23644588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 25853769 - 25853646
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| |||  |||||||||||||||||| | || ||||||||||||||||||  |||| ||||||||||||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  25853669 atttttcgtcctaccccccatttt 25853646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 39556119 - 39555996
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||  |||| |||||||||||||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  39556019 atttttcgtcctaccccccatttt 39555996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 48453013 - 48453115
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||||||||||||||||||||| |  | ||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  48453013 gtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctaccccccat 48453112  T
Q  358 ttt 360  Q
    |||    
T  48453113 ttt 48453115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 17464488 - 17464617
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| |||||||| || |||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||| || |||||    
T  17464588 tgttgcatttttcgtcctacctcctatttt 17464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 4275911 - 4275783
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||   |||||||||||||||||||| |||| | |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  4275811 gttgcatttttcgtcctacctcctatttt 4275783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 29801967 - 29801835
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| ||||||| |||||||| ||| || | ||||||||||||||||||||||| |  ||||||||||||||||||||| |||  |||||||||||    
T  29801967 tatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat 29801868  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||| ||| || |||||    
T  29801867 ttttgttgcatttttcgtcccacctcctatttt 29801835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 23645007 - 23644884
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||  ||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||| ||||||| || |||||    
T  23644907 atttttcatcctacctcctatttt 23644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 26274566 - 26274693
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| | |||||| |||||| | |||| |||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||    
T  26274566 aggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 26274665  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| ||||||||| |||| || |||||    
T  26274666 ttgcatttttcgtcatacctcctatttt 26274693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 43973444 - 43973567
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| ||||||||||||| || | ||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  43973544 atttttcgtcctaccccccatttt 43973567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 22425354 - 22425232
Alignment:
Q  239 taattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc- 337  Q
    |||||| |||||||  ||| |||| | |||||||||||||| ||||||||  |||| |||||||||||||||| || | ||||||||||||||||||||     
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  338 tttttcgtcctaccccccatttt 360  Q
    |||||||||||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt 22425232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 43973989 - 43973859
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||  |  ||||||||||||||||||||| |||  |||||||||||||    
T  43973989 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcattt 43973890  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  43973889 ttgttgcatttttcgtcctacctcctatttt 43973859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 20841103 - 20840980
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||   || |||| ||||||||||||||||||||||| |  | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  20841103 ttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 20841004  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  20841003 atttttcgtcctacctcctatttt 20840980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 25853237 - 25853360
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||| |||||||  |||||||||| |||||||||| |||| ||||||||||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 25853336  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||| ||||| || |||||    
T  25853337 atttttcgttctacctcctatttt 25853360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 27393664 - 27393787
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| ||||||||| ||||||||| |  | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  27393664 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 27393763  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||||||| |||||    
T  27393764 atttttcgtcctaccccctatttt 27393787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 32534958 - 32535085
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||| ||||||||||| ||||| |  | ||||||||||||||||||| |||| ||||||||||||||||    
T  32534958 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 32535057  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||| || |||||    
T  32535058 ttgcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 37727472 - 37727349
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||  ||| ||||||||||||||||||||||| |   |||||||||||||||||||| |||| ||||||||||||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  37727372 atttttcgtcctacctcctatttt 37727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 24301105 - 24300975
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  | |||||||||| |||||||| |||| || | ||||||||    
T  24301105 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattt 24301006  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  24301005 ttgttgcatttttcgtcctaccccccatttt 24300975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 360
Target Start/End: Complemental strand, 25612522 - 25612396
Alignment:
Q  235 ggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgt 334  Q
    |||||||||| |||||||  ||| |||| ||| ||||||||||||| ||||| |  |||||||||| |||||||||| |||  | |||||||||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  335 tgc-tttttcgtcctaccccccatttt 360  Q
    ||| |||||||||||||||||||||||    
T  25612422 tgcatttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 30098305 - 30098182
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| | ||||||||||||||||| |  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  30098305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 30098206  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  30098205 atttttcgtcctacctcctatttt 30098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 37726932 - 37727055
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| || || |||||||||||  |  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  37726932 ttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37727031  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  37727032 atttttcgtcctaccccccatttt 37727055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 39555581 - 39555704
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | ||||||||||||||||||  |||| ||||||||||||||||||||    
T  39555581 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 39555680  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||| ||||| || |||||    
T  39555681 atttttcgttctacctcctatttt 39555704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 22424846 - 22424940
Alignment:
Q  267 gcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||  | |||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| || |||||    
T  22424846 gcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 22424940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 32535505 - 32535383
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatc-----attttt 332  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||     ||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  333 gttgc-tttttcgtcctaccccc 354  Q
    ||||| |||||||||||||||||    
T  32535405 gttgcatttttcgtcctaccccc 32535383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 17465034 - 17464910
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| ||||||||| || ||||||||||  | |||||||||| |||||||||| |||| ||||||||||||||||||||    
T  17465034 ttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 17464935  T
Q  338 --tttttcgtcctaccccccatttt 360  Q
      ||||| |||||||||||||||||    
T  17464934 atttttttgtcctaccccccatttt 17464910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 41047214 - 41047118
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||||||  | |||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||||| || |||||    
T  41047214 ttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 41047118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 26837358 - 26837486
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| | |||||  |||||| | ||||||||||||||||| ||||| |  ||||||| |||| ||| |||| |||| |||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  26837458 gttgcatttttcgtcctacctcctatttt 26837486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 354
Target Start/End: Original strand, 30104478 - 30104602
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||| ||||||||||||| ||||| |  |||||||||||| || | ||| |||| |||||||||||||    
T  30104478 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcattt 30104577  T
Q  331 ttgttgc-tttttcgtcctaccccc 354  Q
    ||||||| |||||||||||||||||    
T  30104578 ttgttgcatttttcgtcctaccccc 30104602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 31778656 - 31778779
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| ||||||| |||||||||| |  ||||||||||||||||||||| |||| ||  ||||||||||||||||    
T  31778656 ttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgc 31778755  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  31778756 atttttcgtcctacctcctatttt 31778779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 50116951 - 50116828
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| ||| | ||||||||||| |||||||  |||||| ||| |||||||||| |||  ||| ||||||||||||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
      ||||||||||||||||||||||    
T  50116851 aattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 355
Target Start/End: Original strand, 29801359 - 29801477
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  | | |||| ||||| ||||||| ||||||||| |  ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 29801458  T
Q  338 -tttttcgtcctacccccc 355  Q
     ||||||||| ||||||||    
T  29801459 atttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 32697242 - 32697125
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||||| |||||  ||| |||| || |||||||||||||| | ||||   ||||||||||||||||||||  || | ||||||||||||||||||||    
T  32697242 ttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgc 32697143  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||||||||||||||    
T  32697142 atttttcgtcctaccccc 32697125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 23228549 - 23228427
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||  |||| ||||||||||||||||| || ||||  ||||||||||| ||||||||  |||| ||||||||||||||| ||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgc 23228451  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| ||||||||    
T  23228450 atttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 27394119 - 27393996
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||  |||| |  | |||||||||||||||||||  ||| ||||||||||||||||||||    
T  27394119 ttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 27394020  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||| | |||||||||| |||||    
T  27394019 attttccatcctacccccaatttt 27393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 5137529 - 5137419
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| |||||||||||| |||||||||  |  |||||||||| |||||||||  |||| ||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  332 tgttgcttttt 342  Q
    |||||| ||||    
T  5137429 tgttgcatttt 5137419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 26837904 - 26837775
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||| |||||||||||  |  || ||||||| |||||||||| |||  |||| ||||||||    
T  26837904 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttct-gccctttaaaatagaacaaaacggtcattcaagtatcattt 26837806  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| ||||| |||||||||||||||||    
T  26837805 ttgttgcattttttgtcctaccccccatttt 26837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 51474855 - 51474753
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||| ||||||||||| |||||||  |||||||||||| |||||||  |||| | | |||||||||||||||| ||||||||||||||||| ||    
T  51474855 gtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgcatttttcgtcctacccccaat 51474756  T
Q  358 ttt 360  Q
    |||    
T  51474755 ttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 337
Target Start/End: Original strand, 24300556 - 24300658
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| | ||||| | || |||| ||||| || |||||||||||||| | |||||||||||||||| ||||| || | ||||||||||||||||    
T  24300556 aggtttaattacatttttg-gtctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttg 24300654  T
Q  334 ttgc 337  Q
    ||||    
T  24300655 ttgc 24300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 25420683 - 25420560
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| | | || | ||| ||||||||||||| || |||   |||||||||| |||| ||||  |||| |||||||| |||||||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||||||||||||    
T  25420583 atttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 337
Target Start/End: Original strand, 51473431 - 51473530
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| ||| |||||||| ||||| |  ||||||||||||||||||||  |||| ||  ||||||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 18010234 - 18010164
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||||  ||   |||||||||||||||||||| ||||||||||| ||| |||||||    
T  18010234 ccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccatttt 18010164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 37220614 - 37220683
Alignment:
Q  292 cttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||||||| ||||  |||| ||| ||||||||||||||||  |||||||||||||| |||||||    
T  37220614 cttttaaaacagaataaaattgtccttcagttatcatttttgttgcacttttcgtcctaccctccatttt 37220683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 45965995 - 45966064
Alignment:
Q  292 cttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||| |||||||  |||| || |||||||||| |||||| |||||||| ||| ||||||||||    
T  45965995 cttttaaaacataacaaaaatgtccttcgattatcatttgtgttgcatttttcgttctaacccccatttt 45966064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 29306956 - 29307079
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  29307056 atttttcgtcctaccccccatttt 29307079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 5540360 - 5540237
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| | |||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  5540360 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgc 5540261  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  5540260 atttttcgtcctaccccccatttt 5540237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 5963124 - 5962997
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| |||||||||||||||||||| ||||  |||||||||| ||||||||||||||  ||||||||||||||||    
T  5963124 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttg 5963025  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||||||||||||    
T  5963024 ttgcatttttcgtcctaccccccatttt 5962997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 18984117 - 18984245
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||| |||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt 18984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 15646737 - 15646614
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||| || || ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  15646737 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15646638  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||||||| |||||    
T  15646637 atttttcgtcctacccccaatttt 15646614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 50970820 - 50970697
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||| |||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  50970820 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 50970721  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  50970720 atttttcgtcctaccccccatttt 50970697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 233 - 351
Target Start/End: Original strand, 15646190 - 15646309
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| |||||||||||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||  || | |||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  333 gttgc-tttttcgtcctacc 351  Q
    ||||| ||||||||||||||    
T  15646290 gttgcatttttcgtcctacc 15646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 17433757 - 17433634
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| ||||  ||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  17433657 atttttcgtcctacctcctatttt 17433634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 18984661 - 18984538
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  18984661 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984562  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  18984561 atttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 15173095 - 15173222
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||||||||||||||||| ||| |  ||||||||||  ||||||||| || | ||||||||||||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||||||||||||    
T  15173195 ttgcatttttcgtcctaccccccatttt 15173222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 359
Target Start/End: Complemental strand, 26859606 - 26859479
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||| ||| |||| |||| ||||||||||||||  || |  |||||||||||||||||| || |||| |||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  333 gttgc-tttttcgtcctaccccccattt 359  Q
    ||||| ||||||||||||||||||||||    
T  26859506 gttgcatttttcgtcctaccccccattt 26859479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 29869623 - 29869746
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||| |||||||||||    
T  29869623 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 29869722  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||| |||||||||    
T  29869723 atttttcgtcctacaccccatttt 29869746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 33144461 - 33144338
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||  | || |||| |||||||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  33144361 atttttcgtcctaccccccatttt 33144338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 8678544 - 8678658
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  338 -tttttcgtcctacc 351  Q
     ||||||||||||||    
T  8678644 atttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 9018969 - 9019099
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||| |||||||||||  |  ||||||||||||||||||||| |||  |||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  9019069 ttgttgcatttttcgtcctaccccccatttt 9019099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 26859062 - 26859176
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| |||||||||| |||||||||||| |  | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  338 -tttttcgtcctacc 351  Q
     ||||||||||||||    
T  26859162 atttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 5539819 - 5539942
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg- 336  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| |||||||||||||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  337 ctttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  5539919 atttttcgtcctacctcctatttt 5539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 29307476 - 29307361
Alignment:
Q  246 acttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcg 344  Q
    |||||||  ||| |||| ||| ||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  29307476 acttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcg 29307377  T
Q  345 tcctaccccccatttt 360  Q
    ||||||| || |||||    
T  29307376 tcctacctcctatttt 29307361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 29870161 - 29870038
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||| |||||||||| |  | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  29870061 atttttcgtcctacctcctatttt 29870038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 39154048 - 39154143
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatt 358  Q
    ||||| |||||||||||||| ||||  ||||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||||||||||    
T  39154048 ttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgcatttttcgtcctaccccccatt 39154143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 351
Target Start/End: Original strand, 50970276 - 50970395
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |   |||||||| ||||||||||| |||| |||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  333 gttgc-tttttcgtcctacc 351  Q
    ||||| ||||||||||||||    
T  50970376 gttgcatttttcgtcctacc 50970395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 360
Target Start/End: Original strand, 17433209 - 17433342
Alignment:
Q  228 ttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatca 327  Q
    |||||| || ||||||| |||||||  |||  ||| |||||||||||| |||||||  |||  ||||||||||||||||||||| |||| |||| |||||    
T  17433209 ttattttggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatca 17433308  T
Q  328 tttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||| |||||| ||||||||||||||||    
T  17433309 tttttgttgcatttttcatcctaccccccatttt 17433342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 351
Target Start/End: Complemental strand, 8679093 - 8678969
Alignment:
Q  228 ttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatca 327  Q
    |||||| || ||||||| |||||||  ||| |||| |||||||||||||| |||||||| |  ||||||||||||||||||||  |||  ||||||||||    
T  8679093 ttattttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatca 8678994  T
Q  328 tttttgttgc-tttttcgtcctacc 351  Q
    |||||||||| ||||||||||||||    
T  8678993 tttttgttgcatttttcgtcctacc 8678969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 15173640 - 15173513
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||| ||||||||| |  ||||||||||||||||||||  |||| |||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  15173541 gttgcatttttcgtcctacctcctatttt 15173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 4636513 - 4636390
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||| || |  |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||| ||| || |||||    
T  4636413 atttttcgtcccacctcctatttt 4636390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 33143928 - 33144043
Alignment:
Q  246 acttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcg 344  Q
    |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||| |||| | |||||    
T  33143928 acttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatttcg 33144027  T
Q  345 tcctaccccccatttt 360  Q
    ||||||| || |||||    
T  33144028 tcctacctcctatttt 33144043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 39154562 - 39154439
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |   ||||||||||| |||||||  |||| ||||||||||||||||||||    
T  39154562 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 39154463  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  39154462 atttttcgtcctacctcctatttt 39154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 21856045 - 21856149
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||  |||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  338 ttttt 342  Q
     ||||    
T  21856145 atttt 21856149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 21856585 - 21856462
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||| ||||||| || |  | ||||||||||||||||||| |||| |||| ||||||||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||| |||||||||    
T  21856485 atttttcgtcctactccccatttt 21856462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 52268293 - 52268416
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| || | ||||||| ||||||||| ||||| |  ||||||||||||||||||||| |||  ||| ||||||||||||||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgc 52268392  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
      ||||||||||||||||||||||    
T  52268393 acttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 9019512 - 9019382
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||| ||||||||| ||||||||  |  | ||||||||||||||||||| |||  |||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  9019412 ttgttgcatttttcgtcctacctcctatttt 9019382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 47827104 - 47827033
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgtt 335  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||| | ||||||||||||||||    
T  47827104 ttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 321
Target Start/End: Complemental strand, 2733506 - 2733416
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaa 321  Q
    |||||| |||||||||||||||  |||||||| |||||||| || ||||| ||||| |  ||||||||||||||||||||| |||| ||||    
T  2733506 tttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 5962616 - 5962704
Alignment:
Q  273 tcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||    ||||||||||||||||||||| |||  |||| ||||||||||||||| |||||||| ||||| || |||||    
T  5962616 tcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgcatttttcgttctacctcctatttt 5962704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 17112337 - 17112407
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||| |||| |||| ||||| ||||||||||||||| |||| |||||||||||||| || |||||    
T  17112337 ccttttaaaatagaataaaatagtccttcaattatcatttttattgcatttttcgtcctacctcctatttt 17112407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 4636033 - 4636098
Alignment:
Q  295 ttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||| | |||| |||| ||||||||||||||| ||||| || ||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt 4636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaa 310  Q
    ||||||| |||||||  ||| |||| |||| |||||||||||| |||||||  |||||||||| | |||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 350
Target Start/End: Complemental strand, 52269237 - 52269177
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctac 350  Q
    ||||||||||||||||||||  |||  ||| ||||||||||||||||  ||||||||||||    
T  52269237 ccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 4790 - 4919
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccatttt 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 348
Target Start/End: Complemental strand, 5333 - 5222
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||| |||||||||||||| | |||||||||||||||| ||||| ||   ||||||||||||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  338 -tttttcgtcct 348  Q
     |||||||||||    
T  5233 atttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 19830418 - 19830546
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt 19830546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 35289448 - 35289320
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||| |||||||||||||    
T  35289348 gttgcatttttcgtcataccccccatttt 35289320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 19590528 - 19590651
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||| ||||||||||||||||    
T  19590628 atttttcatcctaccccccatttt 19590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 34534338 - 34534210
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| |||||||||||||||   || |||| |||||||||||||||||||| || |  || |||||||||||||||||| |||| |||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt 34534210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 37786770 - 37786893
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||| |||||||||||| |  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  37786770 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37786869  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  37786870 atttttcgtcctaccccccatttt 37786893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 19591074 - 19590944
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||   || |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  19591074 tttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19590975  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  19590974 ttgttgcatttttcgtcctacctcctatttt 19590944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 37787316 - 37787186
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||||| |   |||||||| ||||||||||| || | |||||||||||||    
T  37787316 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcattt 37787217  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  37787216 ttgttgcatttttcgtcctacctcctatttt 37787186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 38859190 - 38859060
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| || ||||||||||    
T  38859190 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattt 38859091  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  38859090 ttgttgcatttttcgtcctacctcctatttt 38859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 4641439 - 4641566
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |   ||||| ||||| |||||||| |||  ||||||||||||||||    
T  4641439 aggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttg 4641538  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||||||||||||    
T  4641539 ttgcatttttcgtcctaccccccatttt 4641566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 29100397 - 29100270
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| |||| |||||||| ||| ||||| |  ||||||||||||||||||||| |||  ||||||||||||||||    
T  29100397 aggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 29100298  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| ||||| |||||||||||||||||    
T  29100297 ttgcattttttgtcctaccccccatttt 29100270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 32005156 - 32005033
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||  ||| ||||| |||||||||||||||||||  |||||||||| |||||||||| |||| | ||||||||||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||| |||||||||    
T  32005056 atttttcgtcctactccccatttt 32005033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 19830961 - 19830839
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||| ||||||||| | ||||||||||||| |||||||| || | ||||||||||||||||||||    
T  19830961 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgttgc 19830862  T
Q  338 tttttcgtcctaccccccatttt 360  Q
     |||| |||||||| || |||||    
T  19830861 atttttgtcctacctcctatttt 19830839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 29099874 - 29099976
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| |||||||||||||||||||| || |  ||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| || ||    
T  29099874 gtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacctcctat 29099973  T
Q  358 ttt 360  Q
    |||    
T  29099974 ttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 28584438 - 28584341
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg-ctttttcgtcctaccccccatttt 360  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||  |||| |||||||||||||||||||  ||||||||| |||||||||||||    
T  28584438 ttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 4478247 - 4478119
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    ||||||||| || |||||||| ||| |||| ||||||||||||||||||||||| |  ||||||||||||||| || |  |||| |||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||| || ||| ||||||    
T  4478147 gttgcatttttcgtcttatccctcatttt 4478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 350
Target Start/End: Original strand, 35288892 - 35289019
Alignment:
Q  223 aatatttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaat 322  Q
    ||||||||||| || ||||||| |||||||  | | || | ||||||||||||||||||||||| |  ||||||||||||||||||||  |||| |||||    
T  35288892 aatatttattt-ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaat 35288990  T
Q  323 tatcatttttgttgc-tttttcgtcctac 350  Q
    ||||||||||||||| |||||||||||||    
T  35288991 tatcatttttgttgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 38858654 - 38858769
Alignment:
Q  246 acttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcg 344  Q
    |||||||  ||| |||| ||||| ||||||||||||||||| |   |||||||||||||||||||| |||  |||||||||||||||||||| ||||| |    
T  38858654 acttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttgg 38858753  T
Q  345 tcctaccccccatttt 360  Q
    ||||||||||||||||    
T  38858754 tcctaccccccatttt 38858769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 2659356 - 2659259
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||| ||| |||||||||| |  ||||||||||||||||||||| |||  |||||||||||||||||||| |||||| ||||||||||||||||    
T  2659356 ttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcatcctaccccccatttt 2659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 351
Target Start/End: Original strand, 23952727 - 23952848
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcc-tactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    ||||| ||||||| |||||||  ||| |||| ||| || ||||||||||| |||||||  ||||||||||||||||||||| |||| |||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  331 ttgttgc-tttttcgtcctacc 351  Q
    | ||||| ||||||||||||||    
T  23952827 tggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 2658837 - 2658965
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| ||||||   ||| |||| ||||||||||||||||||||||| |  |||||||||| |||||||||  |||| |||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||| |||| || |||||    
T  2658937 gttgcatttttcgtcatacctcctatttt 2658965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 23953240 - 23953148
Alignment:
Q  269 ctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||    ||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  23953240 ctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccccccatttt 23953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 32004612 - 32004740
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||| || || |  ||||||||||||||||||||  |||| |||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||| |||||| || |||||    
T  32004712 gttgcatttttcgccctacctcctatttt 32004740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 34533789 - 34533917
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||   |||||||||||||| ||||  |||  |||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||| ||||||||| || |||||    
T  34533889 gttgcattttccgtcctacctcctatttt 34533917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 38160945 - 38161077
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| ||||||| |||||||  ||| | || ||||||||||||||||| |  || |  ||||||||||||||||||||  |||| |||||||| ||    
T  38160945 tatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattat 38161044  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| ||||||||||||| |||||||||    
T  38161045 ttttgttgcatttttcgtcctactccccatttt 38161077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 350
Target Start/End: Complemental strand, 4641983 - 4641873
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||   ||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  338 -tttttcgtcctac 350  Q
     | |||||||||||    
T  4641886 atatttcgtcctac 4641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 28583437 - 28583565
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||| || | ||||  |  |||||||||||| || ||||| |||| |||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
     |||| |||||||||||||||||||||||    
T  28583537 attgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 22374318 - 22374446
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt 22374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 40815894 - 40815764
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||||||||||| |||||||  ||| |||| |||||||||||||||||||||| ||  ||||||||||||||||||||| | || |||||||||||||    
T  40815894 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattt 40815795  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  40815794 ttgttgcatttttcgtcctaccccccatttt 40815764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 11090519 - 11090647
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||||||||| ||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccatttt 11090647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 26538628 - 26538498
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||| ||||||||||||||||| |||| |||||||||||||    
T  26538628 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcattt 26538529  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  26538528 ttgttgcatttttcgtcctaccccccatttt 26538498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 28616616 - 28616739
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
      ||||||||||||||||||||||    
T  28616716 aattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 35781205 - 35781082
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| ||||||||||||||||| |||||||  |||||||||||||||||||||  ||| ||||||||||||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||| ||||||||||    
T  35781105 atttttcgtcctaacccccatttt 35781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 239350 - 239478
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  | | |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctg-ccttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||||||||||||    
T  239449 tgttgcatttttcgtcctaccccccatttt 239478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  |||||||| ||||||||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||| |||||||| || |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 40027143 - 40027266
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  | | |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  40027143 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 40027242  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||| ||||||||| |||||||    
T  40027243 attttttgtcctaccctccatttt 40027266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 18451380 - 18451250
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||| |||||||||||| |  |||||||||||||||||||| ||||| |||| ||||||||    
T  18451380 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcattt 18451281  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||| ||||||||||||||||    
T  18451280 ttgttgcatttttcttcctaccccccatttt 18451250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 228 - 360
Target Start/End: Complemental strand, 22374877 - 22374744
Alignment:
Q  228 ttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatca 327  Q
    |||| |||| ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| ||||||||||    
T  22374877 ttatgtaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatca 22374778  T
Q  328 tttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||| |||||||||||||| || |||||    
T  22374777 tttttgttgcatttttcgtcctacctcctatttt 22374744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 1978106 - 1978234
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| | |||||  |||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||| |||||  ||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt 1978234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 20444752 - 20444875
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||| |||||||||||||||| |  ||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  20444752 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgc 20444851  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
      ||||||||||||||||||||||    
T  20444852 agttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 26538100 - 26538223
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||| ||||||||||||||||  |  ||||||||||||||||||| | |||| ||||||||||||||||||||    
T  26538100 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgc 26538199  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  26538200 atttttcgtcctaccccccatttt 26538223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 40027686 - 40027559
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||  ||||||||||||||||    
T  40027686 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 40027587  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||| || |||||    
T  40027586 ttgcatttttcgtcctacctcctatttt 40027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 43058336 - 43058459
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| |||||| |||||| ||||||||| |  | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||| ||||||||||||||    
T  43058436 atttttcgttctaccccccatttt 43058459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 7446895 - 7446765
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| | |||||| ||| |||| ||| | ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  7446895 tttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 7446796  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  7446795 ttgttgcatttttcgtcctacctcctatttt 7446765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 349
Target Start/End: Complemental strand, 11091067 - 11090950
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  333 gttg-ctttttcgtccta 349  Q
    ||||  ||||||||||||    
T  11090967 gttgtatttttcgtccta 11090950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 43058883 - 43058752
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||| |   |||||||||||||||||||  |||| ||||||||||     
T  43058883 tatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca- 43058785  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||||||| || |||||    
T  43058784 ttttgttgcatttttcgtcctacctcctatttt 43058752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 3025463 - 3025586
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    |||||||| |||| | |||||  ||| |||| ||||||||||||||||||||||| |   |||||||||||||||||||| |||| |||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  332 tgttgc-tttttcgtcctaccccc 354  Q
    |||||| |||||||||||||||||    
T  3025563 tgttgcatttttcgtcctaccccc 3025586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 28617156 - 28617033
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||  | |||||||||||||||||||||  |||| ||||||||||||||||||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 28617057  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||| || |||||    
T  28617056 atttttcgtcttacctcctatttt 28617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 40815348 - 40815471
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  |||||||||||| |||||||| || | ||||||||||||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  40815448 atttttcgtcctacctcctatttt 40815471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 14432142 - 14432268
Alignment:
Q  235 ggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgt 334  Q
    |||||||||| |||||||  ||| |||| |||||||||||| |||||||||| |  |||||||||| | |||||||| |||| |||| ||||||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  335 tgc-tttttcgtcctaccccccatttt 360  Q
    ||| ||||| |||||||||||||||||    
T  14432242 tgcatttttggtcctaccccccatttt 14432268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 8425352 - 8425480
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    |||| |||||||| |||||||  |||||||| ||||||||||||||||| ||||| || | ||||||||||||||||||| || | |||||||||||||     
T  8425352 ttagatttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttg 8425450  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||| || |||||    
T  8425451 tgttgcatttttcgtcctacctcctatttt 8425480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 359
Target Start/End: Complemental strand, 20440580 - 20440451
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||| |||||||||||||||| |  ||||||||||||||||||||| |||  ||| |||||||||    
T  20440580 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcattt 20440481  T
Q  331 ttgttgc-tttttcgtcctaccccccattt 359  Q
    |||||||  ||||||||||| |||||||||    
T  20440480 ttgttgcagttttcgtcctatcccccattt 20440451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 360
Target Start/End: Complemental strand, 8425903 - 8425779
Alignment:
Q  237 tttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg 336  Q
    |||||||| |||||||   ||||||| |||| |||||||||||| ||||| |  |||||||||| |||||||||| |||| |||||||||||||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  337 c-tttttcgtcctaccccccatttt 360  Q
    | ||||||||| ||||||| |||||    
T  8425803 catttttcgtcttacccccaatttt 8425779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 18450833 - 18450956
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||||||    ||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttttgc 18450932  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||| |||||||| || |||||    
T  18450933 atttttagtcctacctcctatttt 18450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 239886 - 239771
Alignment:
Q  246 acttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcg 344  Q
    |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||  |||| |||||||||||||||||||| |||||||    
T  239886 acttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgtttttcg 239787  T
Q  345 tcctaccccccatttt 360  Q
    || |||| || |||||    
T  239786 tcatacctcctatttt 239771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 351
Target Start/End: Complemental strand, 28847242 - 28847123
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| | |||||  ||| |||| |||| |||||||||||||||||| |   ||||||||||| |||||||| |||| |||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  333 gttgc-tttttcgtcctacc 351  Q
    ||||| ||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 35779711 - 35779834
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| | ||||||||||| ||||| |  | ||||||||||||||||||  |||| ||||||||||||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||| |||||||||||||||||    
T  35779811 attttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 7446345 - 7446462
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| |||| ||||||| |||| ||||| |  ||||||||||||||||||||| |||  ||||||||||||||| ||||    
T  7446345 ttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgc 7446444  T
Q  338 -tttttcgtcctaccccc 354  Q
     ||||||||| |||||||    
T  7446445 atttttcgtcataccccc 7446462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 8972240 - 8972363
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||| | ||||||||| |||||||  ||||| ||||||||||||||  |||  ||||||||||||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||| |||||||| |||||    
T  8972340 atttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 15551502 - 15551625
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||  ||||||||||| |||||||  | |||||||||| |||||||  |||| ||| ||||||||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||| |||| |||||||    
T  15551602 atttttcgtccaaccctccatttt 15551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 14432683 - 14432560
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| |||||||||||| ||||||||||||  | ||||||||||||| ||||  || | |||||||| |||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||| ||||||| || |||||    
T  14432583 atttttcatcctacctcctatttt 14432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 3025983 - 3025882
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||| ||||||||||| ||||  |  |||||||||||| |||||||| |||| |||||||| ||||||||||| |||||||||||||| || ||    
T  3025983 gtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgcatttttcgtcctacctcctat 3025885  T
Q  358 ttt 360  Q
    |||    
T  3025884 ttt 3025882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 15552543 - 15552473
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttg-ctttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||||  |||  |||||||||||||||||||  ||||||||||||||| |||||||    
T  15552543 ccttttaaaacagaacaaaattgtcattcaattatcatttttgttgtatttttcgtcctaccctccatttt 15552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 15828183 - 15828060
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  15828183 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 15828084  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  15828083 atttttcgtcctaccccccatttt 15828060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 2319669 - 2319798
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| | |||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||||||||||||    
T  2319769 tgttgcatttttcgtcctaccccccatttt 2319798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 10900472 - 10900349
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| || | |||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  10900372 atttttcgtcctaccccccatttt 10900349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 18505461 - 18505338
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||  ||| |||| |||| ||||||||||||||| || |  |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  18505361 atttttcgtcctaccccccatttt 18505338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 31470858 - 31470735
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| || |||||||||||||||||||  |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31470759  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  31470758 atttttcgtcctaccccccatttt 31470735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 11277135 - 11277001
Alignment:
Q  227 tttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatc 326  Q
    ||||||| || ||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| || | |||||||||    
T  11277135 tttattttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatc 11277036  T
Q  327 atttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||| |||||||||||||||||||||||    
T  11277035 atttttgttgcatttttcgtcctaccccccatttt 11277001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 12935154 - 12935283
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||| || |||||    
T  12935254 tgttgcatttttcgtcctacctcctatttt 12935283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 18257135 - 18257263
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||| |||||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt 18257263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 20741098 - 20741226
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||  |||| |||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt 20741226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 23075675 - 23075547
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||| ||||| || |||||    
T  23075575 gttgcatttttcgttctacctcctatttt 23075547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 11445537 - 11445406
Alignment:
Q  230 atttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatt 329  Q
    ||||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | ||||||||||||||||||| |||| ||||||||||||    
T  11445537 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatt 11445438  T
Q  330 tttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||| |||||||||||||| || |||||    
T  11445437 tttgttgcatttttcgtcctacctcctatttt 11445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 31470318 - 31470441
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| |||||||||||||||||||||||||   ||||||||||||||||||||||||  |||||||| |||||||||||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgc 31470417  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  31470418 atttttcgtcctacctcctatttt 31470441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 22219902 - 22219772
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||| ||||| || |||||    
T  22219802 ttgttgcatttttcgttctacctcctatttt 22219772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 360
Target Start/End: Original strand, 10899941 - 10900065
Alignment:
Q  237 tttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg 336  Q
    |||||||| |||||||  | | |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  337 c-tttttcgtcctaccccccatttt 360  Q
    | |||||||||||||| || |||||    
T  10900041 catttttcgtcctacctcctatttt 10900065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 1149974 - 1149851
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| || ||||||||| ||||||||||||  |||||||||| |||||||||| |||| ||||||| ||||||||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  1149874 atttttcgtcctaccccccatttt 1149851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 12935704 - 12935576
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |  | || |||||||||||||||| |||| |||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||| | |||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt 12935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 11444983 - 11445113
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||||||||| |||||| |  || |||||||||||| ||||  |||| |||||||||||||    
T  11444983 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcattt 11445082  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| ||||||||||||||| |||||||    
T  11445083 ttgttgcatttttcgtcctaccctccatttt 11445113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 18257679 - 18257565
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||  ||| |||| ||| ||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||| ||||||||| |    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttac 18257580  T
Q  338 -tttttcgtcctacc 351  Q
     ||||||||||||||    
T  18257579 atttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 2322762 - 2322637
Alignment:
Q  236 gtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgtt 335  Q
    ||||||||| |||||||  | | |||| |||| |||||||||||||| ||| |  | ||||||||||||||||||| |||| ||||||||||||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  336 gc-tttttcgtcctaccccccatttt 360  Q
    || |||||||||||||||| ||||||    
T  2322662 gcatttttcgtcctacccctcatttt 2322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 18504920 - 18505045
Alignment:
Q  236 gtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgtt 335  Q
    ||||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | ||||||||||||||||||| || | ||||||||||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  336 gc-tttttcgtcctaccccccatttt 360  Q
     | |||||||||||||| || |||||    
T  18505020 tcatttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 4811798 - 4811694
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||| ||| |||| |||||||||||| ||||||| ||||    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  338 ttttt 342  Q
     ||||    
T  4811698 atttt 4811694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 28472629 - 28472757
Alignment:
Q  227 tttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatc 326  Q
    |||||||||| ||||||| |||||||  ||| |||| |||||| |||||||||| ||||| |  | ||||||||||||||||||  |||  |||||||||    
T  28472629 tttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatc 28472728  T
Q  327 atttttgttgc-tttttcgtcctaccccc 354  Q
    ||||||||||| |||||||||||||||||    
T  28472729 atttttgttgcatttttcgtcctaccccc 28472757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 29859818 - 29859946
Alignment:
Q  227 tttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatc 326  Q
    |||||||||| ||||||| |||||||  ||| |||| |||||| |||||||||| ||||| |  | ||||||||||||||||||  |||  |||||||||    
T  29859818 tttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatc 29859917  T
Q  327 atttttgttgc-tttttcgtcctaccccc 354  Q
    ||||||||||| |||||||||||||||||    
T  29859918 atttttgttgcatttttcgtcctaccccc 29859946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 4811401 - 4811498
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||| ||||||||||||||||||||  |||||||||| |||| ||||| |||| |||||||||||||||||| | ||||||||| |||||||||||||    
T  4811401 ttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttcatttttcgtcttaccccccatttt 4811498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 3835272 - 3835145
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  || ||||| ||| ||||||||||||| ||||| |  |  |||||||||||||||||  |||| | ||||||||||||||    
T  3835272 aggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttg 3835173  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    | || |||||||||||||||||||||||    
T  3835172 tggcatttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 23074002 - 23074096
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  |||||||||| |||||||||| |||| |||||||||||||||    
T  23074002 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 29033437 - 29033560
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| || | ||||||| ||||||||| ||||| |  ||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
       |||| ||||||||||||||||    
T  29033537 acatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaatt 323  Q
    |||| ||||||| |||||||| ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||  |||| ||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 15827641 - 15827766
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaa--acagtccctcaattatcatttttgtt 335  Q
    ||||||| |||||||  ||| |||| ||||| ||||||||||||||||  | ||||||||||||| ||||||  || |||| |||| |||||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  336 gc-tttttcgtcctaccccccatttt 360  Q
    || |||||||||||||| || |||||    
T  15827741 gcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 20741646 - 20741552
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    ||||||| ||| |||  ||| |||| |||||||||||||||||||| || |  ||||||||||||||||||||| |||| |||||||||||||||    
T  20741646 ttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 20741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 18296201 - 18296265
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccc 354  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||    
T  18296201 ccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgcatttttcgtcctaccccc 18296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 29035179 - 29035056
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| ||||||   ||| |||| || |||||||||||||| |||| ||  ||||||||||||||||||||  |||| | | ||||||||||||||||    
T  29035179 ttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgc 29035080  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||| |||| |||||||    
T  29035079 atttttcgtcccaccctccatttt 29035056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 11276614 - 11276716
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| |||| ||||||| ||||||| || || ||||||||||||||||||||  |||| |||||| ||||||||||| | |||||||||||||| || ||    
T  11276614 gtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttcatttttcgtcctacctcctat 11276713  T
Q  358 ttt 360  Q
    |||    
T  11276714 ttt 11276716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 19176841 - 19176709
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| ||||||| |||||||  ||| |||| |||||||||||||| |||||||| |  ||||||||||||||||||||| |||| |||||||||||    
T  19176841 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19176742  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||||||||||||||||    
T  19176741 ttttgttgcatttttcgtcctaccccccatttt 19176709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 11656451 - 11656581
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||||||||||||||||||  ||||||||||| ||||||||| |||| ||||||| |||||    
T  11656451 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccattt 11656550  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  11656551 ttgttgcatttttcgtcctaccccccatttt 11656581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 233 - 354
Target Start/End: Original strand, 41681132 - 41681254
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  333 gttgc-tttttcgtcctaccccc 354  Q
    ||||| |||||||||||||||||    
T  41681232 gttgcatttttcgtcctaccccc 41681254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 12571858 - 12571990
Alignment:
Q  230 atttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatt 329  Q
    ||||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||  || ||||||||||||||||||||| |||  ||||||||||||    
T  12571858 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatt 12571957  T
Q  330 tttgttgc-tttttcgtcct-accccccatttt 360  Q
    |||||||| ||||||||||| ||||||||||||    
T  12571958 tttgttgcatttttcgtcctaaccccccatttt 12571990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 13225181 - 13225058
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  13225181 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 13225082  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  13225081 atttttcgtcctacctcctatttt 13225058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 234 - 352
Target Start/End: Original strand, 33328157 - 33328276
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||| |||| |||| |||||||||||    
T  33328157 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 33328256  T
Q  334 ttgc-tttttcgtcctaccc 352  Q
    |||| |||||||||||||||    
T  33328257 ttgcatttttcgtcctaccc 33328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 351
Target Start/End: Complemental strand, 41681676 - 41681562
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||| |||||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681577  T
Q  338 -tttttcgtcctacc 351  Q
     ||||||||||||||    
T  41681576 atttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 31133218 - 31133346
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||| |||||||||||||||||||    |||||||||||| ||||||||||||| |||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccatttt 31133346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 360
Target Start/End: Complemental strand, 12572396 - 12572270
Alignment:
Q  235 ggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgt 334  Q
    |||||||||| |||||||  ||| |||| |||| |||||||||||||| |||||   |||||||||||||||||||| |||| |||||||||||||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 12572297  T
Q  335 tgc-tttttcgtcctaccccccatttt 360  Q
    ||| |||||||||||||| || |||||    
T  12572296 tgcatttttcgtcctacctcctatttt 12572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 13224665 - 13224766
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg-ctttttcgtcctaccccccat 357  Q
    |||| ||||||||||||||||||||||| |  |||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||    
T  13224665 gtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaatttttcgtcctaccccccat 13224763  T
Q  358 ttt 360  Q
    |||    
T  13224764 ttt 13224766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 19176287 - 19176416
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| ||||||||||||||||||| ||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||| ||| || |||||    
T  19176387 tgttgcatttttcgtccgacctcctatttt 19176416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 9930199 - 9930076
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| || | ||||||||||||||||||||||| |  |||||||||| |||||||||  |||| |||| |||||||||||||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  9930099 atttttcgtcctaccccccatttt 9930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 11656999 - 11656876
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||||||    ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  11656999 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 11656900  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  11656899 atttttcgtcctacctcctatttt 11656876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 9928912 - 9929026
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||  |||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  338 -tttttcgtcctacc 351  Q
     ||||||||||||||    
T  9929012 atttttcgtcctacc 9929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 34541097 - 34540967
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |   ||||||||||| |||||||  |||| |||||||||||||    
T  34541097 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattt 34540998  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  34540997 ttgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 31133762 - 31133639
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||| || |  ||||||||||||||||||||| |||| |||||||| |||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||| || |||||    
T  31133662 atttttcgtcatacctcctatttt 31133639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 33328682 - 33328559
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| || |||||||||||||||| |||||   ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||| ||| ||||||||    
T  33328582 atttttcgtcccacctcccatttt 33328559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 44831250 - 44831373
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||  ||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| || |||||||||||||||||    
T  44831250 ttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 44831349  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  44831350 atttttcgtcctacctcctatttt 44831373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 9178177 - 9178060
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||| ||||  ||| ||||||||||||||||| |||| |||| |||||||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||| || |||||||    
T  9178077 atttttcatcttaccccc 9178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 44831793 - 44831664
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||| | |||||||  ||| |||| ||||| ||||||||||||||||| |   |||||||||||||||||||| ||   ||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| ||||| |||||||||||||||||    
T  44831693 tgttgcatttttggtcctaccccccatttt 44831664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 33742918 - 33743047
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||| ||||||||||||||||||| |  |||||||||||||||| |||| |||  |||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcattt 33743016  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||| ||| |||||||||||||| || |||||    
T  33743017 ttgatgcatttttcgtcctacctcctatttt 33743047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 33743406 - 33743338
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||| ||   |||||||||||||||||||| |||||||||||||||||||||||    
T  33743406 ttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt 33743338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 331
Target Start/End: Complemental strand, 8074089 - 8074000
Alignment:
Q  242 ttatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    |||||||||||  ||| |||| |||||||| |||||||| || |||| |||||||||||||||||||||   ||| ||||||||||||||    
T  8074089 ttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt 8074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 4629821 - 4629923
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||| || |||||||||||||| |  |||||||||| |||||||||| |||  ||||||||||||||| |||| ||||||||| |||| || ||    
T  4629821 gtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgcatttttcgtcttacctcctat 4629920  T
Q  358 ttt 360  Q
    |||    
T  4629921 ttt 4629923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 342
Target Start/End: Complemental strand, 11337069 - 11336960
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  | | |||| ||||| ||||||||||| |||||    ||||||||||||||| ||||| |||  |||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  333 gttgcttttt 342  Q
    ||||| ||||    
T  11336969 gttgcatttt 11336960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 10918186 - 10918252
Alignment:
Q  295 ttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||| |||||  |||| |||| ||||||||||||||| |||||| || |||||||||||||    
T  10918186 ttaaaacagagcaaaattgtccttcaaatatcatttttgttgcatttttcatcataccccccatttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 4630337 - 4630211
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||| ||||||||| |||||||| | | |||| |||| |||||||||||| ||||| |    ||||||||||||| | ||| |||| |||||||        
T  4630337 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta---- 4630242  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
      ||||||| |||||| ||||||||||||||||    
T  4630241 --ttgttgcatttttcatcctaccccccatttt 4630211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 54995067 - 54995195
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||| |||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  54995167 gttgcatttttcgtcctacctcctatttt 54995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 12234871 - 12234748
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||  ||| |||| |||||||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  12234871 ttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12234772  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  12234771 atttttcgtcctacctcctatttt 12234748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 232 - 350
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  332 tgttgc-tttttcgtcctac 350  Q
    |||||| |||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 25938213 - 25938090
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| ||||||||||||||||| ||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 25938114  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||| |||||||| || |||||    
T  25938113 attttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 45082966 - 45082843
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||| |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  45082866 atttttcgtcctacctcctatttt 45082843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 46193947 - 46193824
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  46193847 atttttcgtcctaccccccatttt 46193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 48526727 - 48526600
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    |||||||||||||||||||  ||| |||| |||| |||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||| |||||    
T  48526727 aggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttg 48526628  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||||||| || |||||    
T  48526627 ttgcatttttcgtcctacctcctatttt 48526600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 20471059 - 20470930
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| |||||||||| ||||||||||||||  ||||||||||||||||||||| |||  ||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||| || |||||    
T  20470959 tgttgcatttttcgtcctacctcctatttt 20470930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 25447783 - 25447655
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  | | |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||  |||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||||||||| |||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt 25447655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 2118296 - 2118419
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| ||||||||||||||||| ||||| |  |||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  2118396 atttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 4219560 - 4219683
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| ||||||||||||||||||||||| |  | |||||||| | ||||||||||||| ||||||||||||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  4219660 atttttcgtcctaccccccatttt 4219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 11153689 - 11153566
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | |||||||||||||||||||  ||| ||||||||||||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||||| |||||||    
T  11153589 atttttcgtcctaccctccatttt 11153566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 12234320 - 12234455
Alignment:
Q  226 atttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattat 325  Q
    ||||| ||||| ||||||| |||||||  |||  ||| ||||| || |||||||||||||| |  ||||||||||||||||||||| |||  ||||||||    
T  12234320 atttaattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 12234419  T
Q  326 catttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||||| |||||||||||||||||||||||    
T  12234420 catttttgttgcatttttcgtcctaccccccatttt 12234455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 25447250 - 25447373
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||| |||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  25447350 atttttcgtcctacctcctatttt 25447373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 33109687 - 33109810
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| ||||| ||||||||||||||||| |   |||||||||||||||||||| |||| ||||||||||||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  33109787 atttttcgtcctaccccccatttt 33109810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 2118841 - 2118720
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  | | |||| ||||||| |||| |||||||||| ||||||||||||||| |||||||| |||  ||||||||||||||||    
T  2118841 aggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttg 2118742  T
Q  334 ttgc-tttttcgtcctaccccc 354  Q
    |||| |||||||||||||||||    
T  2118741 ttgcatttttcgtcctaccccc 2118720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 15523233 - 15523361
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
     |||| |||||||||||||| || |||||    
T  15523333 tttgcatttttcgtcctacctcctatttt 15523361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 54995614 - 54995487
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||| |||||||||||||||||||| ||||  |||||||||| |||||||||| |||| |||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||| ||||||||||    
T  54995515 gttgcatttttcgtcctaacccccatttt 54995487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 11153149 - 11153272
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||  ||| |||| ||||||||||||| ||| |||||||  |||||||||| |||| ||||| |||| ||||||||||||||||||||    
T  11153149 ttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgc 11153248  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  11153249 atttttcgtcctacctcctatttt 11153272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 18751598 - 18751725
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||||||||||  |||||||||||  ||||||||||||||||||||| |||| |||| |||||||||||    
T  18751598 aggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttg 18751697  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| |||||||||| ||| || |||||    
T  18751698 ttgcatttttcgtcccacctcctatttt 18751725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 348
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||  |||  |||| |||||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  338 -tttttcgtcct 348  Q
     |||||||||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 22434182 - 22434305
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg- 336  Q
    ||||||| |||||||  ||| |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  337 ctttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  22434282 atttttcgtcctacctcctatttt 22434305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 23494446 - 23494569
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| ||||||||||||||||||| ||| |  ||||||||||||||||||| | |||| ||||||||||||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  23494546 atttttcgtcctaccccccatttt 23494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 38962361 - 38962238
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  ||| |||| |||| ||| ||||||||||||||    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccatttt 38962238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 46193408 - 46193531
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||| ||||| |  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  46193508 atttttcgtcctacctcctatttt 46193531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 4220108 - 4219978
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||||||||||| |||||||  ||| |||| |||||||||||||||||||| || |   |||||||||||||||||||  |||  |||||||||||||    
T  4220108 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattt 4220009  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||| || |||||    
T  4220008 ttgttgcatttttcgtcctacctcctatttt 4219978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 25937666 - 25937796
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| | |||||  ||| |||| || |||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  25937666 tttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 25937765  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| ||||| |||||  ||||||||||    
T  25937766 ttgttgcattttttgtcctgtcccccatttt 25937796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 51020793 - 51020923
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||| |||  ||| |||||  | |||| ||||||||| |  |||||||||||||||||||||  ||| |||||||||||||    
T  51020793 tttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattt 51020892  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||||||||||    
T  51020893 ttgttgcatttttcgtcctaccccccatttt 51020923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 354
Target Start/End: Complemental strand, 22434726 - 22434602
Alignment:
Q  230 atttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatt 329  Q
    ||||||||||||||| | |||||  ||| |||| ||||||||||||||||||||||| |  || ||| |||||||||||||| |||  ||||||||||||    
T  22434726 atttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcct-gccattttaaacagaacaaaacggtcattcaattatcatt 22434628  T
Q  330 tttgttgc-tttttcgtcctaccccc 354  Q
    |||||||| |||||||||||||||||    
T  22434627 tttgttgcatttttcgtcctaccccc 22434602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 15523776 - 15523653
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  | | |||| |||| |||||||||||||||||| |  |||||||||||| |||||||  |||| |||| |||||||||||||||    
T  15523776 ttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgc 15523677  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  15523676 atttttcgtcctaccccccatttt 15523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  |||  ||| ||||||| ||||||||| ||||| |  |||||||||||| |||||||| |||| |||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 43243801 - 43243705
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccc 354  Q
    |||| ||||||||||||||||| |||||||  ||||||||||||||||||||  || | |||||||||||||||||||| ||||| |||||||||||    
T  43243801 gtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctaccccc 43243705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 48713893 - 48713765
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||| |  || |||| || ||||||||| |||| |||||||   |||||||||||||||||||  |||| |||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||||| ||| |||||||    
T  48713793 gttgcatttttcgtcctcccctccatttt 48713765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 51021342 - 51021215
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||| ||| |||| ||||||||||||||||| ||||| |  |||||||||||| |||||||| |||| | |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  51021243 gttgcatttttcgtcctacctcctatttt 51021215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 20958375 - 20958285
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgctttttcgtcctaccccc 354  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||   |||| |||||||||||||||||||| |||| |||||||||||    
T  20958375 ttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgcatttttgtcctaccccc 20958285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 43281311 - 43281210
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||||||||||||||| |||||||  | ||||||||||||||||||  || | |||||||| ||||||||||| ||||||||||||||||||||    
T  43281311 gtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctaccccccat 43281213  T
Q  358 ttt 360  Q
    |||    
T  43281212 ttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 48526199 - 48526316
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||   || |||| ||| |||||||| ||||||||   |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||||||||||||||    
T  48526299 atttttcgtcctaccccc 48526316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 45082429 - 45082551
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    |||||||||||||  ||||||  | | |||| |||| ||||||||||| |||||  |  |||||||||| |||||||||| |||| ||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  332 tgttgc-tttttcgtcctaccccc 354  Q
    |||||| |||||||||||||||||    
T  45082528 tgttgcatttttcgtcctaccccc 45082551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 20957218 - 20957315
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||||| ||||||||  ||||||||||| |||||||  |||| |||||||||| ||||||||| ||||||||| ||| |||||||||    
T  20957218 ttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgtcatactccccatttt 20957315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 22170424 - 22170356
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||| |||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||    
T  22170424 ttttaaaacaaaacaaaacggtcattcaattatcatttttgttgcatttttcgtcctaccccccatttt 22170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 16690935 - 16691062
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| | |||||  |||||||| |||  |||||||||||| ||||| |  |  ||||||||| |||||||   ||| ||||||||||||||||    
T  16690935 aggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttg 16691034  T
Q  334 ttgc-tttttcgtcctaccccccatttt 360  Q
    |||| ||||||||||||||||| |||||    
T  16691035 ttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 44892690 - 44892567
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||||| |||||  ||| |||| ||| ||||||||||||| ||||  |  | ||||||||||||||||||| |||  ||||||||  ||||||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||||||||| |||||||    
T  44892590 atttttcgtcctaccctccatttt 44892567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 12503494 - 12503562
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| || |||||    
T  12503494 ttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 12503562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 35363155 - 35363028
Alignment:
Q  225 tatttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactgg-tcatatccttttaaaacagaacaaaacagtccctcaatt 323  Q
    ||||||||| || ||||||| |||||||| ||| |||| ||||||||||||||||||||| ||   || ||| |||| | |||||||| |||  ||||||    
T  35363155 tatttattt-ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaatt 35363057  T
Q  324 atcatttttgttgc-tttttcgtcctacc 351  Q
    |||||||||||||| |||||||| |||||    
T  35363056 atcatttttgttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 337
Target Start/End: Original strand, 48708293 - 48708397
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  || ||||| ||||||||  ||||||| || || |  |||||||||||| |||||||| |||| |||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  333 gttgc 337  Q
    |||||    
T  48708393 gttgc 48708397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 44890520 - 44890643
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| | |||||  |||||||| ||| |||| |||||||| |||||||  ||||||||||||||||||||   ||| | ||||||  ||||||||||    
T  44890520 ttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgc 44890619  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||| || |||||||||||||    
T  44890620 atttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||| |||  ||||||||||||||| |||| |||||||||||||| || |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 48293592 - 48293720
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||| ||||||||||| || || | ||  ||||||||| |||||||  || | |||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||| |||| ||| |||||||    
T  48293692 gttgcatttttcatcctgccctccatttt 48293720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 16691613 - 16691491
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| || ||||| ||| ||||||||||||| ||||| |  ||| || ||||| |||||||  |||| | |||||| |||||||||||    
T  16691613 ttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcct-gcctctttaaacataacaaaattgtcctttaattattatttttgttgc 16691515  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||| ||||||||    
T  16691514 atttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 12503913 - 12503855
Alignment:
Q  303 gaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt 12503855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 48295054 - 48294961
Alignment:
Q  269 ctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc--tttttcgtcctaccccccatttt 360  Q
    |||||||||||| ||||| |  |  ||||||||| |||||||  |||  ||||||||||||||||||||  |||| ||||||||||||||||||    
T  48295054 ctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 18183518 - 18183388
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  18183518 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 18183419  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| |||||||||||||||| ||||||    
T  18183418 ttgttgcatttttcgtcctacccctcatttt 18183388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 2865302 - 2865174
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||| | |||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt 2865174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 18182968 - 18183096
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  | | |||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||| || |||||    
T  18183068 gttgcatttttcgtcctacctcctatttt 18183096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 5819471 - 5819348
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||  ||||||||||||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  5819371 atttttcgtcctaccccccatttt 5819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 354
Target Start/End: Original strand, 15708966 - 15709091
Alignment:
Q  230 atttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatt 329  Q
    ||||||| ||||||| |||||||  ||| |||| |||||||||||||||||||||| ||  ||||||||||||||||||||| |||| ||||||||||||    
T  15708966 atttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatt 15709065  T
Q  330 tttgttgc-tttttcgtcctaccccc 354  Q
    |||||||| | |||||||||||||||    
T  15709066 tttgttgcatatttcgtcctaccccc 15709091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 8647441 - 8647564
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  | ||||||||||||||||||  |||| ||||||||||||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  8647541 atttttcgtcctaccccccatttt 8647564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 19359139 - 19359262
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||  ||| ||||||||||||||||||||||| |  |||||||||| |||||||||| |||| ||||||||||||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  19359239 atttttcgtcctaccccccatttt 19359262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 360
Target Start/End: Complemental strand, 164740 - 164610
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||||| |||||| |||  ||| |||||| |||||| ||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  164740 tttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattt 164641  T
Q  331 ttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||| ||||| |||||||||||||||||    
T  164640 ttgttgcattttttgtcctaccccccatttt 164610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 360
Target Start/End: Complemental strand, 19359692 - 19359555
Alignment:
Q  224 atatttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaatt 323  Q
    |||| ||| |||| ||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||    
T  19359692 atatatatataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 19359593  T
Q  324 atcatttttgtt-gctttttcgtcctaccccccatttt 360  Q
    |||||||||||| | |||||||||||||| || |||||    
T  19359592 atcatttttgttggatttttcgtcctacctcctatttt 19359555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 5818927 - 5819055
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||  |||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| ||||||||| |||| || |||||    
T  5819027 gttgcatttttcgtcttacctcctatttt 5819055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 24362383 - 24362255
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  ||| || | ||||||||||||||||||||||| |  ||||||||||||||| ||||| |||| |||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt 24362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 2864757 - 2864880
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  |||||||| ||||||||||||||||| || ||||  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  2864857 atttttcgtcctacctcctatttt 2864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 15372422 - 15372311
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||||||||||| |||||||  ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||| ||||||||    
T  15372422 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 15372323  T
Q  331 ttgttgcttttt 342  Q
    ||||||| ||||    
T  15372322 ttgttgcatttt 15372311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 29455284 - 29455161
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| || ||||  ||| |||| |||| |||||||||||||||||| |  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  29455284 ttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 29455185  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  29455184 atttttcgtcctaccccccatttt 29455161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 8460959 - 8461056
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||  |||||||||||||||||||| ||||||||| |||||||||||||    
T  8460959 ttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcatttttcgtcataccccccatttt 8461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 351
Target Start/End: Complemental strand, 8647987 - 8647866
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattt 330  Q
    |||||| ||||||| |||||||  ||| |||| |||||||||||||||||||| || |  ||||||||||||||||||||| |||| |||||||||||||    
T  8647987 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 8647888  T
Q  331 ttgttgc-tttttcgtcctacc 351  Q
    ||||||| ||||||||| ||||    
T  8647887 ttgttgcatttttcgtcatacc 8647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 14215244 - 14215367
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||||| |||||||||||||||| ||| ||||||||||||||||||||  |||| ||| ||||||||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  14215344 atttttcgtcctacctcctatttt 14215367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 360
Target Start/End: Original strand, 29454762 - 29454866
Alignment:
Q  257 ttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctacccccc 355  Q
    |||||| ||||||||||||||||| |||||||  ||||||||||||||||||||| |||| | |||||||||||||| ||| |||||||||||||| ||     
T  29454762 ttgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgctgcatttttcgtcctacctcct 29454861  T
Q  356 atttt 360  Q
    |||||    
T  29454862 atttt 29454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 14215791 - 14215662
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| | |||||  ||| |||| ||| |||||||||||||||| || |  ||||||||||||||||||||| |||| |||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| ||||||||| || ||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccatttt 14215662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 24361866 - 24361963
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||| ||||  |||| |||||||||||||||  |||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  24361866 ttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatttttcgtcctaccccccatttt 24361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 8461473 - 8461350
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||||||||||||| || |   |||||||||||||||||||| |||| |||||||||||||||| |||    
T  8461473 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgctgc 8461374  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||| || |||||    
T  8461373 atttttcgtcatacctcctatttt 8461350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 24325241 - 24325338
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||| ||||  |||| |||||||||||||||  |||| |||| |||||||||||| || |||||||||||||||||||||||    
T  24325241 ttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatttttcgtcctaccccccatttt 24325338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 25000605 - 25000508
Alignment:
Q  264 ttggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||||  |||  |||||||||||||||||||| |||||||||| ||| || |||||    
T  25000605 ttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttgcatttttcgtcccacctcctatttt 25000508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 4222264 - 4222147
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| || ||||||||| |||||||  ||||||||||||||||||||  |||  ||| ||||||||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||||||||||||||    
T  4222164 atttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 4624737 - 4624644
Alignment:
Q  268 cctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||| ||||||| ||  ||||||||| ||||||||  ||  ||||||||||||| |||||| |||||||||||||||||||||||    
T  4624737 cctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccatttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 353
Target Start/End: Complemental strand, 14464067 - 14463946
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| ||||||   ||| |||| |||||||||||||||||||  |  | ||||||||||| ||||||||||  ||| |||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  333 gttgc-tttttcgtcctacccc 353  Q
     |||| ||||||||||||||||    
T  14463967 attgcatttttcgtcctacccc 14463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 269 - 360
Target Start/End: Original strand, 7348593 - 7348685
Alignment:
Q  269 ctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||||||||| ||||| |  |||||||||||||||||||||  ||| ||  ||||||||||||||||  ||||||||||||||||||||||    
T  7348593 ctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 164194 - 164316
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| ||||||||||||||||||| |  ||||||| |||| |||||||| |||  |||||||||| |||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttgc 164292  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  164293 atttttcgtcctacctcctatttt 164316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 7349559 - 7349436
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| |||||||||||| ||||| |   ||||||||||| ||||||||  ||| ||| ||||||||||||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
      ||||| ||||||||||||||||    
T  7349459 acttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 15709510 - 15709388
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  | |||||| |||||||||||| |||||| |||||  ||||| ||||||||||||||| |||| | | ||||||||| ||||||    
T  15709510 ttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgc 15709412  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  15709411 atttttcgtcctacctcctatttt 15709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 326
Target Start/End: Original strand, 24331555 - 24331650
Alignment:
Q  231 tttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatc 326  Q
    |||||| ||||||| |||||||  ||| |||| |||  |||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc 24331650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 6019282 - 6019189
Alignment:
Q  269 ctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc--tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||| || |   |||||||||||||||||||| |||  | ||||||||||||||||||  |||||||||||||| ||||||||    
T  6019282 ctactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 347
Target Start/End: Original strand, 15371874 - 15371983
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| || | |||| |||||||||||  ||||| |  ||||||||||||||||||||  |||| ||||||||||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15371972  T
Q  338 -tttttcgtcc 347  Q
     ||||||||||    
T  15371973 atttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 25000114 - 25000216
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| ||||||||||||||||  |||||||  ||| ||||||||||| ||||  |||| | ||||||||||||| |||| ||||| ||||||||||||||    
T  25000114 gtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccccccat 25000213  T
Q  358 ttt 360  Q
    |||    
T  25000214 ttt 25000216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 6018348 - 6018415
Alignment:
Q  269 ctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    |||||||||||||||||||| |||||||||||||||||||||   | | ||||||||||||||||||||    
T  6018348 ctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgc 6018415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 4219666 - 4219783
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||| ||| |||| |||| ||| | || ||| |||||||  | |||||||||||||||||   |||| | | ||||||||||||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||||||||||||||    
T  4219766 atttttcgtcctaccccc 4219783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 24332049 - 24331981
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcat-ttttgttgc--tttttcgtcctaccccccatt 358  Q
    ||||||||||||||||||| ||||  |||||||||| |||||||||  |||||||||||||||||||||    
T  24332049 ttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtcctaccccccatt 24331981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 16019134 - 16019006
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||||||||||| |||||||  |||  ||| ||||| ||||||||||| ||||| |   ||||||||| |||| ||||  || | |||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  333 gttg-ctttttcgtcctaccccccatttt 360  Q
    ||||  |||||||||||||| || |||||    
T  16019034 gttgtatttttcgtcctacctcctatttt 16019006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 4623207 - 4623267
Alignment:
Q  294 tttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctacccc 353  Q
    |||||||||||||||||  |||| ||||||||||||||| | || |||| |||||||||||    
T  4623207 tttaaaacagaacaaaattgtccttcaattatcatttttatggcattttccgtcctacccc 4623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 134224 - 134092
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| ||||||| |||||||  ||| |||| ||||||||||||||||||| |||||  |||||||| ||||||||||||  ||| ||||||| |||    
T  134224 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacat 134125  T
Q  329 ttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||||||||||||||||||||||    
T  134124 ttttgttgcatttttcgtcctaccccccatttt 134092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 1665 - 1793
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  |||  ||| ||||||||||||||||||||||| |  ||||||||||||||||||||   ||| |||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt 1793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 2215 - 2086
Alignment:
Q  232 ttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttt 331  Q
    ||||| ||||||| |||||||  ||| |||| |||||||||| |||||||||||| |  ||||||||||||||||||||| |||  ||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  332 tgttgc-tttttcgtcctaccccccatttt 360  Q
    |||||| |||||||||||||| || |||||    
T  2115 tgttgcatttttcgtcctacctcctatttt 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 4754 - 4626
Alignment:
Q  233 taggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    |||| ||||||| |||||||  | | |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||| | |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  333 gttgc-tttttcgtcctaccccccatttt 360  Q
    ||||| |||||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt 4626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 360
Target Start/End: Original strand, 4242 - 4329
Alignment:
Q  274 cacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||| |  |||||||||||| |||||||| |||| |||||||||||||||||||| |||||||| ||||| || |||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctatttt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 10414 - 10297
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||| |||||||||||||||||  |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  338 -tttttcgtcctaccccc 354  Q
     |||||||||||||||||    
T  10314 atttttcgtcctaccccc 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 360
Target Start/End: Original strand, 9934 - 10057
Alignment:
Q  237 tttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg 336  Q
    |||||||| | |||||  ||| |||| || ||||| ||||||||||| || |  |||||||| | |||||||||  |||| |||||||||| |||||||     
T  9934 tttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgtta 10033  T
Q  337 ctttttcgtcctaccccccatttt 360  Q
    | ||||| ||||||| || |||||    
T  10034 cattttcatcctacctcctatttt 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 756 - 878
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  | | |||| ||||||||||||||| ||||||| |  ||||||||||||||||||||| |||| |||||||||| |||||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttgc 854  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||||||||||||    
T  855 atttttcgtcctaccccccatttt 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 1283 - 1160
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| ||||||   ||| |||| ||||| ||||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     | |||||||||||| || |||||    
T  1183 atctttcgtcctacctcctatttt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 11165 - 11042
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| |||||||||| |||||||||||| |  |||||||||||| |||||||| |||| ||||||||||||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     |||||||||||||| || |||||    
T  11065 atttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 10645 - 10747
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| |||||||||||| |||||||||| |  ||||||||||||||||||||| |||| |||| ||||||||| ||||| ||||||||||||||| ||||    
T  10645 gtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctccat 10744  T
Q  358 ttt 360  Q
    |||    
T  10745 ttt 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 64305 - 64428
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc 337  Q
    ||||||| |||||||  ||| |||| ||| | |||||||||||||| || |  ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  64305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 64404  T
Q  338 -tttttcgtcctaccccccatttt 360  Q
     ||||||||| |||||||||||||    
T  64405 atttttcgtcataccccccatttt 64428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 234 - 349
Target Start/End: Complemental strand, 64851 - 64735
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| |||||||  ||| |||| ||||| |||||||||||||||||    ||||||||||||||||||||| |||| | ||||||||||||||    
T  64851 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttg 64752  T
Q  334 ttgc-tttttcgtccta 349  Q
    |||| ||||||||||||    
T  64751 ttgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 570 - 668
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttg 336  Q
    ||||||| |||||||| ||| |||| ||||||||||||||||| || ||||  ||||||||||||||||||||| |||| |||||||||||||||||||    
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttg 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 28764 - 28662
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 357  Q
    |||| |||||||||| ||||||||||||||  ||||||||||||||||||||| |||  ||||||||||||||||||||  |||||||||| ||||||||    
T  28764 gtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgcagttttcgtccttccccccat 28665  T
Q  358 ttt 360  Q
    |||    
T  28664 ttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 229 - 354
Target Start/End: Complemental strand, 42709 - 42583
Alignment:
Q  229 tatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcat 328  Q
    |||||||| |||||||||||||||  ||| |||| |||| ||||||| ||||||| |  |  ||||||||||||||||||||| |||| ||| |||||||    
T  42709 tatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat 42610  T
Q  329 ttttgttgc-tttttcgtcctaccccc 354  Q
    ||||||| | |||||||||||||||||    
T  42609 ttttgtttcatttttcgtcctaccccc 42583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 342
Target Start/End: Original strand, 42168 - 42276
Alignment:
Q  234 aggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttg 333  Q
    ||||||||||| ||||||    || |||| |||| ||| ||||||||||| || |  | ||||||||||||||||||| |||  ||||||||||||||||    
T  42168 aggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttg 42267  T
Q  334 ttgcttttt 342  Q
    |||| ||||    
T  42268 ttgcatttt 42276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 354
Target Start/End: Original strand, 18841 - 18955
Alignment:
Q  241 attatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tt 339  Q
    |||| |||||||  |||| ||| ||||||||||||||||||||||| |  |||||||||||| |||||||| || | |||||||||||||||||||| ||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatt 18940  T
Q  340 tttcgtcctaccccc 354  Q
    |||| ||||||||||    
T  18941 tttcatcctaccccc 18955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  238 ttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcattttt 332  Q
    ||||||| |||||||  ||| |||| ||||||||||||||||||| ||| |  ||||||||||||||||||||| |||| |||||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 62002 - 61877
Alignment:
Q  236 gtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgtt 335  Q
    ||||||||| |||||||| ||| |||| |||| |||||||||||| ||||| || |||||||||| |||||||||   ||  |||| |||||||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgtt 61903  T
Q  336 -gctttttcgtcctaccccccatttt 360  Q
       |||||||||||||||||||||||    
T  61902 atatttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 61020 - 61111
Alignment:
Q  227 tttatttaggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccct 318  Q
    ||||| |||| |||| || |||||||| ||| |||| ||||||||||||||||| || || |  | |||||||| |||||||| ||||||||    
T  61020 tttatataggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaagcagtccct 61111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 473 - 565
Alignment:
Q  259 gtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctac 350  Q
    |||| ||||||||||||||||| |||||||   ||||||||||| |||| ||  |||| |||||||||||||||||||| |||||||||||||    
T  473 gtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 7777 - 7707
Alignment:
Q  291 ccttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||||| |||  ||| |||||||||||||||| ||||||||||||||||| |||||    
T  7777 ccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 8554 - 8452
Alignment:
Q  235 ggtttaattatacttttgagccttgtgtattggcctactcacgaaactggtcatatccttttaaaacagaacaaaacagtccctcaattatcatttttgt 334  Q
    |||||||||| |||||||  | |  ||| |||| ||||| |||||||||||| || |||||||||||| | |||||| |||| |||||||||||||||||    
T  8554 ggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgt 8455  T
Q  335 tgc 337  Q
    |||    
T  8454 tgc 8452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 16983 - 16915
Alignment:
Q  293 ttttaaaacagaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| || |||||    
T  16983 ttttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcctatttt 16915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 16564 - 16622
Alignment:
Q  303 gaacaaaacagtccctcaattatcatttttgttgc-tttttcgtcctaccccccatttt 360  Q
    ||||||||| |||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt 16622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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