View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18572_low_7 (Length: 273)
Name: NF18572_low_7
Description: NF18572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18572_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 256
Target Start/End: Complemental strand, 18776206 - 18775963
Alignment:
| Q |
13 |
aaaatacaagttgacattaaaataacagtgacatatttgaccagaatattccttnnnnnnnntatttgaccaaaatatcatatatcgaggataattatta |
112 |
Q |
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| T |
18776206 |
aaaatacaagt-gacattaaaataacagtgacatatttgaccagaatattccttaaaaaaaatatttgaccaaaatatcatatatcgaggataattatta |
18776108 |
T |
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| Q |
113 |
tgaaaaaattgaggatagtaatattaatacataaaatagttaccattgcttcagaagtctggtattataaatacaccacttttgaccgt-aaccaccatc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
18776107 |
tgaaaaaattgaggatagtaatattaatacataaaatagctaccattgcttcagaagtctggtattataaatacaccacttttgaccgtaaaccaccatc |
18776008 |
T |
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| Q |
212 |
aacaaaacaaactttgcaaagaataattgttgtgaaatggcaaac |
256 |
Q |
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| T |
18776007 |
aacaaaacaaactttgcaaagaataattgttgtgaaatggcaaac |
18775963 |
T |
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